mRNA_H-elongata_contig58593.13349.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig58593.13349.1 vs. uniprot
Match: D7FJK0_ECTSI (AAA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJK0_ECTSI) HSP 1 Score: 216 bits (550), Expect = 3.400e-60 Identity = 127/314 (40.45%), Postives = 176/314 (56.05%), Query Frame = 1
Query: 1 RESEAAAMREVGIGMDEVFKKLISKLIKIGWRYTNSPVSLLGSDTWIVKPGFSIGKARVGVEKFETPEAVVKYVQEVLKFGSGSTLGGMDKGKEGKTHQRPDTPSEEQDILNEDMEVCDDEIEENERGTVELGHGAELSPGCQ--VLQSVLEALQPSNAPPSLLKQRVAEYNQVLRFIRESISQSWGGSLYLCGCPGTGKTQTMTHVQEEIQRMVAKGKIPKPEFYDFRGTAFTEPDSMHNDLWHAIAGGVSPPHGV--EKALRRRLT----RSKNSAAMIVVVVDEIDQLMYQNRDVLRKLFEWADAPKSRLV 918
R +AA+ R VGI + K+ L ++GW+++ + L ++ W++KPG ++ GV+KF ++YVQ VL+ + + G +E E T E L+ + LQS LEAL PSNAP +LK+R E+NQVL+F+ S++++ GGSLYLCG PGTGKTQTM HV+ E+Q +KG IP P F+ F GT FT P++MH LW AI G G+ EK L +L + ++ M+VVV+DEIDQLM +NR VLRKLF+WADAPKSRLV
Sbjct: 398 RMKDAASFRRVGITENSKRGKIFEMLKQLGWKWSGGTLHKLSNEYWMLKPGATVRNGEAGVDKFAGQGQTIEYVQSVLRLSAAANSDGQGXXXXXXXXXXXXXXXXXXXXXXXXXXXEGEENGGREDMTKEPEQHRLLTSTTKGRALQSALEALNPSNAP-DVLKRRTTEFNQVLQFVTNSVAKASGGSLYLCGVPGTGKTQTMAHVRAEVQEKFSKGHIPAPAFHAFTGTEFTSPNAMHGALWRAINGARGGEEGIGTEKKLDNKLKYWQKKPTATSPMLVVVLDEIDQLMTENRQVLRKLFQWADAPKSRLV 710
BLAST of mRNA_H-elongata_contig58593.13349.1 vs. uniprot
Match: A0A484L3T8_9ASTE (Cell division control protein n=3 Tax=Cuscuta sect. Cleistogrammica TaxID=1824901 RepID=A0A484L3T8_9ASTE) HSP 1 Score: 89.0 bits (219), Expect = 4.390e-16 Identity = 53/167 (31.74%), Postives = 87/167 (52.10%), Query Frame = 1
Query: 433 LQSVLEALQPSNAPPSLLKQRVAEYNQVLRFIRESISQSWGGSLYLCGCPGTGKTQTMTHVQEEIQRMVAKGKIPKPEFYDFRGTAFTEPDSMHNDLWHAI-----AGGVSPPHGVEKALRRRLTRSKNSAAMIVVVVDEIDQLMYQNRDVLRKLFEWADAPKSRLV 918
L +V E L S AP +++ R E N+VL F ++ + Q GSLY+CGCPGTGK+ +M V+EE+ KG + +P+ T+ T+ + + + I +G SP ++ + + M+++V DE+D L+ ++R VL LF P SR +
Sbjct: 119 LNAVKEVLHVSTAPSAIVC-RELEKNRVLEFCKQRVEQERAGSLYVCGCPGTGKSLSMEKVKEELIDWATKGGVQEPDILSINCTSLTKTSEIFDKILERIQPKRLSGLTSPLQLLQNMFS---VKQQAGTPMMLIVADELDYLITKDRAVLHDLFMLTTFPFSRCI 281
BLAST of mRNA_H-elongata_contig58593.13349.1 vs. uniprot
Match: UPI0008736D4D (origin recognition complex subunit 1 n=1 Tax=Anoplophora glabripennis TaxID=217634 RepID=UPI0008736D4D) HSP 1 Score: 89.0 bits (219), Expect = 5.900e-16 Identity = 49/148 (33.11%), Postives = 76/148 (51.35%), Query Frame = 1
Query: 475 PSLLKQRVAEYNQVLRFIRESISQSWGGSLYLCGCPGTGKTQTMTHVQEEIQRMVAKGKIPKPEFYDFRGTAFTEPDSMHNDLWHAIAGGVSPPHGVEKALRRRLTRSKNSAAMIVVVVDEIDQLMYQNRDVLRKLFEWADAPKSRLV 918
P+ L R EYN VL F+ + +S GG +Y+ G PGTGKT T+T V ++Q IPK F G TEP + ++ ++G + L + T+SK V++VDE+D L + +DV+ L +W K++L+
Sbjct: 579 PNALPCRDKEYNTVLNFVEDKLSDGCGGCIYISGVPGTGKTATVTSVISDLQ---LNKDIPKFVFVSINGMRLTEPKQAYVEILKQLSGKTVHWEQAQSILEEKFTKSKKMVPT-VMLVDELDVLYTRRQDVVYNLLDWPSKAKNQLI 722
BLAST of mRNA_H-elongata_contig58593.13349.1 vs. uniprot
Match: UPI000580E684 (origin recognition complex subunit 1 isoform X7 n=2 Tax=Acromyrmex echinatior TaxID=103372 RepID=UPI000580E684) HSP 1 Score: 88.6 bits (218), Expect = 6.380e-16 Identity = 50/162 (30.86%), Postives = 83/162 (51.23%), Query Frame = 1
Query: 433 LQSVLEALQPSNAPPSLLKQRVAEYNQVLRFIRESISQSWGGSLYLCGCPGTGKTQTMTHVQEEIQRMVAKGKIPKPEFYDFRGTAFTEPDSMHNDLWHAIAGGVSPPHGVEKALRRRLTRSKNSAAMIVVVVDEIDQLMYQNRDVLRKLFEWADAPKSRLV 918
LQ + L S P SL R E+N + F+ + + GGS+Y+ G PGTGKT T+ + + ++R V KGK+ + +F + G +EP + + ++G VS L ++ S M +++VDE+D L + +DV+ L +W +RLV
Sbjct: 202 LQEIRTKLHVSAVPKSL-PCREEEFNNIYTFLESKLMDNSGGSIYINGVPGTGKTATVNEIVKCLKRSVEKGKLNRFDFVEINGMKLSEPRQAYVQILKQLSGKVSTWEQAYNMLEKKFNSSAKRP-MTLLLVDELDLLCTKRQDVIYNLLDWPTKASARLV 361
BLAST of mRNA_H-elongata_contig58593.13349.1 vs. uniprot
Match: UPI000580EEE3 (origin recognition complex subunit 1 isoform X6 n=2 Tax=Acromyrmex echinatior TaxID=103372 RepID=UPI000580EEE3) HSP 1 Score: 88.6 bits (218), Expect = 6.490e-16 Identity = 50/162 (30.86%), Postives = 83/162 (51.23%), Query Frame = 1
Query: 433 LQSVLEALQPSNAPPSLLKQRVAEYNQVLRFIRESISQSWGGSLYLCGCPGTGKTQTMTHVQEEIQRMVAKGKIPKPEFYDFRGTAFTEPDSMHNDLWHAIAGGVSPPHGVEKALRRRLTRSKNSAAMIVVVVDEIDQLMYQNRDVLRKLFEWADAPKSRLV 918
LQ + L S P SL R E+N + F+ + + GGS+Y+ G PGTGKT T+ + + ++R V KGK+ + +F + G +EP + + ++G VS L ++ S M +++VDE+D L + +DV+ L +W +RLV
Sbjct: 216 LQEIRTKLHVSAVPKSL-PCREEEFNNIYTFLESKLMDNSGGSIYINGVPGTGKTATVNEIVKCLKRSVEKGKLNRFDFVEINGMKLSEPRQAYVQILKQLSGKVSTWEQAYNMLEKKFNSSAKRP-MTLLLVDELDLLCTKRQDVIYNLLDWPTKASARLV 375
BLAST of mRNA_H-elongata_contig58593.13349.1 vs. uniprot
Match: UPI0005F3DDE5 (origin recognition complex subunit 1 n=1 Tax=Vollenhovia emeryi TaxID=411798 RepID=UPI0005F3DDE5) HSP 1 Score: 87.8 bits (216), Expect = 1.160e-15 Identity = 50/162 (30.86%), Postives = 82/162 (50.62%), Query Frame = 1
Query: 433 LQSVLEALQPSNAPPSLLKQRVAEYNQVLRFIRESISQSWGGSLYLCGCPGTGKTQTMTHVQEEIQRMVAKGKIPKPEFYDFRGTAFTEPDSMHNDLWHAIAGGVSPPHGVEKALRRRLTRSKNSAAMIVVVVDEIDQLMYQNRDVLRKLFEWADAPKSRLV 918
LQ + L S P SL R E+N + F+ + + GGS+Y+ G PGTGKT T+ + + ++R V KGK+ +F + G +EP + + ++G V L +R S +M +++VDE+D L + +DV+ L +W +RLV
Sbjct: 202 LQELRTRLHVSAVPKSL-PCREEEFNNIYTFLESKLKDNSGGSIYINGVPGTGKTATVNEIMKCLKRSVEKGKLDYFDFVEINGMKLSEPRQAYVQILKQLSGQVLTWEQAYNTLEKRFN-SNAKRSMTLLLVDELDLLCTKRQDVIYNLLDWPTKASARLV 361
BLAST of mRNA_H-elongata_contig58593.13349.1 vs. uniprot
Match: UPI00053C6F27 (cell division control protein 6 homolog n=1 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C6F27) HSP 1 Score: 87.4 bits (215), Expect = 1.410e-15 Identity = 50/166 (30.12%), Postives = 89/166 (53.61%), Query Frame = 1
Query: 433 LQSVLEALQPSNAPPSLLKQRVAEYNQVLRFIRESISQSWGGSLYLCGCPGTGKTQTMTHVQEEIQRMVAKGKIPKPEFYDFRGTAFTEPDSMHNDLW--HAIAGGVSPPHGVEKALRRRLTRSKNSAA--MIVVVVDEIDQLMYQNRDVLRKLFEWADAPKSRLV 918
L++V EAL S AP S++ R E V F+++ + Q GSLY+CGCPGTGK+ +M V++++ + +P P+ T+ T + N + + G V+ K L+ ++ + S + M++++ DE+D L+ ++R +L LF P SR++
Sbjct: 113 LKAVKEALHVSRAPSSIVC-RDDEQRWVFEFVKDCVEQEKAGSLYICGCPGTGKSLSMERVKQQVNDWAKQEGLPSPDTVSVNCTSLTNAADIFNKILGENQAKGKVNGSSSPLKHLQNLFSQKQQSPSSKMMLIIADEMDYLITKDRGILHDLFMLTTLPFSRII 277
BLAST of mRNA_H-elongata_contig58593.13349.1 vs. uniprot
Match: A0A6J1R5W3_9HYME (Origin recognition complex subunit 1 n=2 Tax=Temnothorax TaxID=300110 RepID=A0A6J1R5W3_9HYME) HSP 1 Score: 87.0 bits (214), Expect = 2.430e-15 Identity = 50/162 (30.86%), Postives = 82/162 (50.62%), Query Frame = 1
Query: 433 LQSVLEALQPSNAPPSLLKQRVAEYNQVLRFIRESISQSWGGSLYLCGCPGTGKTQTMTHVQEEIQRMVAKGKIPKPEFYDFRGTAFTEPDSMHNDLWHAIAGGVSPPHGVEKALRRRLTRSKNSAAMIVVVVDEIDQLMYQNRDVLRKLFEWADAPKSRLV 918
LQ + L S P SL R E+N + F+ + + GGS+Y+ G PGTGKT T+ + + ++R V KGK+ +F + G +EP + + ++G V L +R + S M +++VDE+D L + +DV+ L +W +RLV
Sbjct: 382 LQEIRTRLHVSAVPKSL-PCREEEFNNIYTFLESKLMDNSGGSIYINGVPGTGKTATVNEILKCLKRAVEKGKLDHFDFVEINGMKLSEPRQAYVQILKQLSGKVLTWEQAYNMLEKRFS-SNAKRPMTLLLVDELDLLCTKRQDVIYNLLDWPTKASARLV 541
BLAST of mRNA_H-elongata_contig58593.13349.1 vs. uniprot
Match: A0A195FXZ0_9HYME (Origin recognition complex subunit 1 n=12 Tax=Attini TaxID=143999 RepID=A0A195FXZ0_9HYME) HSP 1 Score: 86.3 bits (212), Expect = 4.360e-15 Identity = 49/162 (30.25%), Postives = 82/162 (50.62%), Query Frame = 1
Query: 433 LQSVLEALQPSNAPPSLLKQRVAEYNQVLRFIRESISQSWGGSLYLCGCPGTGKTQTMTHVQEEIQRMVAKGKIPKPEFYDFRGTAFTEPDSMHNDLWHAIAGGVSPPHGVEKALRRRLTRSKNSAAMIVVVVDEIDQLMYQNRDVLRKLFEWADAPKSRLV 918
LQ + L S P SL R E+N + F+ + + GGS+Y+ G PGTGKT T+ + + ++R V KGK+ + +F + G +EP + + ++G V L ++ S M +++VDE+D L + +DV+ L +W +RLV
Sbjct: 357 LQEIRTKLHVSAVPKSL-PCREEEFNNIYTFLESKLMDNSGGSIYINGVPGTGKTATVNEIVKCLKRSVEKGKLNRFDFVEINGMKLSEPRQAYVQILKQLSGKVVTWEQAYNMLEKKFN-SNAKRPMTLLLVDELDLLCTKRQDVIYNLLDWPTKASARLV 516
BLAST of mRNA_H-elongata_contig58593.13349.1 vs. uniprot
Match: UPI00125D52C5 (cell division control protein 6 homolog B n=2 Tax=Ipomoea TaxID=4119 RepID=UPI00125D52C5) HSP 1 Score: 85.5 bits (210), Expect = 6.550e-15 Identity = 51/168 (30.36%), Postives = 86/168 (51.19%), Query Frame = 1
Query: 433 LQSVLEALQPSNAPPSLLKQRVAEYNQVLRFIRESISQSWGGSLYLCGCPGTGKTQTMTHVQEEIQRMVAKGKIPKPEFYDFRGTAFTEPDSMHNDLWHAI------AGGVSPPHGVEKALRRRLTRSKNSAAMIVVVVDEIDQLMYQNRDVLRKLFEWADAPKSRLV 918
L +V EAL S AP +++ R AE N+VL F ++ + Q GSLY+ GCPGTGK+ ++ V+E + K +P+ T+ T+ + N + I +G +P ++ + + +M++++ DE+D L+ Q+R VL LF P SR +
Sbjct: 119 LNAVKEALHVSTAPSTIMC-RDAEQNRVLEFCKQCVEQGKAGSLYVSGCPGTGKSLSIEKVKEALVDWAKKVNFQQPDILTINCTSLTKTSEIFNKILEKIQPKKKLSGSTTPLQLLQNLFS---LKQQAGTSMMLIIADELDYLITQDRAVLHDLFMLTTFPSSRCI 282 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig58593.13349.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig58593.13349.1 >prot_H-elongata_contig58593.13349.1 ID=prot_H-elongata_contig58593.13349.1|Name=mRNA_H-elongata_contig58593.13349.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=299bp MREVGIGMDEVFKKLISKLIKIGWRYTNSPVSLLGSDTWIVKPGFSIGKAback to top mRNA from alignment at H-elongata_contig58593:2475..3595+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig58593.13349.1 ID=mRNA_H-elongata_contig58593.13349.1|Name=mRNA_H-elongata_contig58593.13349.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1121bp|location=Sequence derived from alignment at H-elongata_contig58593:2475..3595+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig58593:2475..3595+ >mRNA_H-elongata_contig58593.13349.1 ID=mRNA_H-elongata_contig58593.13349.1|Name=mRNA_H-elongata_contig58593.13349.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1794bp|location=Sequence derived from alignment at H-elongata_contig58593:2475..3595+ (Himanthalia elongata Himel1 dioecious)back to top |