mRNA_H-elongata_contig58593.13349.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig58593.13349.1
Unique NamemRNA_H-elongata_contig58593.13349.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig58593.13349.1 vs. uniprot
Match: D7FJK0_ECTSI (AAA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJK0_ECTSI)

HSP 1 Score: 216 bits (550), Expect = 3.400e-60
Identity = 127/314 (40.45%), Postives = 176/314 (56.05%), Query Frame = 1
Query:    1 RESEAAAMREVGIGMDEVFKKLISKLIKIGWRYTNSPVSLLGSDTWIVKPGFSIGKARVGVEKFETPEAVVKYVQEVLKFGSGSTLGGMDKGKEGKTHQRPDTPSEEQDILNEDMEVCDDEIEENERGTVELGHGAELSPGCQ--VLQSVLEALQPSNAPPSLLKQRVAEYNQVLRFIRESISQSWGGSLYLCGCPGTGKTQTMTHVQEEIQRMVAKGKIPKPEFYDFRGTAFTEPDSMHNDLWHAIAGGVSPPHGV--EKALRRRLT----RSKNSAAMIVVVVDEIDQLMYQNRDVLRKLFEWADAPKSRLV 918
            R  +AA+ R VGI  +    K+   L ++GW+++   +  L ++ W++KPG ++     GV+KF      ++YVQ VL+  + +   G                               +E    E  T E      L+   +   LQS LEAL PSNAP  +LK+R  E+NQVL+F+  S++++ GGSLYLCG PGTGKTQTM HV+ E+Q   +KG IP P F+ F GT FT P++MH  LW AI G      G+  EK L  +L     +   ++ M+VVV+DEIDQLM +NR VLRKLF+WADAPKSRLV
Sbjct:  398 RMKDAASFRRVGITENSKRGKIFEMLKQLGWKWSGGTLHKLSNEYWMLKPGATVRNGEAGVDKFAGQGQTIEYVQSVLRLSAAANSDGQGXXXXXXXXXXXXXXXXXXXXXXXXXXXEGEENGGREDMTKEPEQHRLLTSTTKGRALQSALEALNPSNAP-DVLKRRTTEFNQVLQFVTNSVAKASGGSLYLCGVPGTGKTQTMAHVRAEVQEKFSKGHIPAPAFHAFTGTEFTSPNAMHGALWRAINGARGGEEGIGTEKKLDNKLKYWQKKPTATSPMLVVVLDEIDQLMTENRQVLRKLFQWADAPKSRLV 710          
BLAST of mRNA_H-elongata_contig58593.13349.1 vs. uniprot
Match: A0A484L3T8_9ASTE (Cell division control protein n=3 Tax=Cuscuta sect. Cleistogrammica TaxID=1824901 RepID=A0A484L3T8_9ASTE)

HSP 1 Score: 89.0 bits (219), Expect = 4.390e-16
Identity = 53/167 (31.74%), Postives = 87/167 (52.10%), Query Frame = 1
Query:  433 LQSVLEALQPSNAPPSLLKQRVAEYNQVLRFIRESISQSWGGSLYLCGCPGTGKTQTMTHVQEEIQRMVAKGKIPKPEFYDFRGTAFTEPDSMHNDLWHAI-----AGGVSPPHGVEKALRRRLTRSKNSAAMIVVVVDEIDQLMYQNRDVLRKLFEWADAPKSRLV 918
            L +V E L  S AP +++  R  E N+VL F ++ + Q   GSLY+CGCPGTGK+ +M  V+EE+     KG + +P+      T+ T+   + + +   I     +G  SP   ++        + +    M+++V DE+D L+ ++R VL  LF     P SR +
Sbjct:  119 LNAVKEVLHVSTAPSAIVC-RELEKNRVLEFCKQRVEQERAGSLYVCGCPGTGKSLSMEKVKEELIDWATKGGVQEPDILSINCTSLTKTSEIFDKILERIQPKRLSGLTSPLQLLQNMFS---VKQQAGTPMMLIVADELDYLITKDRAVLHDLFMLTTFPFSRCI 281          
BLAST of mRNA_H-elongata_contig58593.13349.1 vs. uniprot
Match: UPI0008736D4D (origin recognition complex subunit 1 n=1 Tax=Anoplophora glabripennis TaxID=217634 RepID=UPI0008736D4D)

HSP 1 Score: 89.0 bits (219), Expect = 5.900e-16
Identity = 49/148 (33.11%), Postives = 76/148 (51.35%), Query Frame = 1
Query:  475 PSLLKQRVAEYNQVLRFIRESISQSWGGSLYLCGCPGTGKTQTMTHVQEEIQRMVAKGKIPKPEFYDFRGTAFTEPDSMHNDLWHAIAGGVSPPHGVEKALRRRLTRSKNSAAMIVVVVDEIDQLMYQNRDVLRKLFEWADAPKSRLV 918
            P+ L  R  EYN VL F+ + +S   GG +Y+ G PGTGKT T+T V  ++Q       IPK  F    G   TEP   + ++   ++G        +  L  + T+SK      V++VDE+D L  + +DV+  L +W    K++L+
Sbjct:  579 PNALPCRDKEYNTVLNFVEDKLSDGCGGCIYISGVPGTGKTATVTSVISDLQ---LNKDIPKFVFVSINGMRLTEPKQAYVEILKQLSGKTVHWEQAQSILEEKFTKSKKMVPT-VMLVDELDVLYTRRQDVVYNLLDWPSKAKNQLI 722          
BLAST of mRNA_H-elongata_contig58593.13349.1 vs. uniprot
Match: UPI000580E684 (origin recognition complex subunit 1 isoform X7 n=2 Tax=Acromyrmex echinatior TaxID=103372 RepID=UPI000580E684)

HSP 1 Score: 88.6 bits (218), Expect = 6.380e-16
Identity = 50/162 (30.86%), Postives = 83/162 (51.23%), Query Frame = 1
Query:  433 LQSVLEALQPSNAPPSLLKQRVAEYNQVLRFIRESISQSWGGSLYLCGCPGTGKTQTMTHVQEEIQRMVAKGKIPKPEFYDFRGTAFTEPDSMHNDLWHAIAGGVSPPHGVEKALRRRLTRSKNSAAMIVVVVDEIDQLMYQNRDVLRKLFEWADAPKSRLV 918
            LQ +   L  S  P SL   R  E+N +  F+   +  + GGS+Y+ G PGTGKT T+  + + ++R V KGK+ + +F +  G   +EP   +  +   ++G VS        L ++   S     M +++VDE+D L  + +DV+  L +W     +RLV
Sbjct:  202 LQEIRTKLHVSAVPKSL-PCREEEFNNIYTFLESKLMDNSGGSIYINGVPGTGKTATVNEIVKCLKRSVEKGKLNRFDFVEINGMKLSEPRQAYVQILKQLSGKVSTWEQAYNMLEKKFNSSAKRP-MTLLLVDELDLLCTKRQDVIYNLLDWPTKASARLV 361          
BLAST of mRNA_H-elongata_contig58593.13349.1 vs. uniprot
Match: UPI000580EEE3 (origin recognition complex subunit 1 isoform X6 n=2 Tax=Acromyrmex echinatior TaxID=103372 RepID=UPI000580EEE3)

HSP 1 Score: 88.6 bits (218), Expect = 6.490e-16
Identity = 50/162 (30.86%), Postives = 83/162 (51.23%), Query Frame = 1
Query:  433 LQSVLEALQPSNAPPSLLKQRVAEYNQVLRFIRESISQSWGGSLYLCGCPGTGKTQTMTHVQEEIQRMVAKGKIPKPEFYDFRGTAFTEPDSMHNDLWHAIAGGVSPPHGVEKALRRRLTRSKNSAAMIVVVVDEIDQLMYQNRDVLRKLFEWADAPKSRLV 918
            LQ +   L  S  P SL   R  E+N +  F+   +  + GGS+Y+ G PGTGKT T+  + + ++R V KGK+ + +F +  G   +EP   +  +   ++G VS        L ++   S     M +++VDE+D L  + +DV+  L +W     +RLV
Sbjct:  216 LQEIRTKLHVSAVPKSL-PCREEEFNNIYTFLESKLMDNSGGSIYINGVPGTGKTATVNEIVKCLKRSVEKGKLNRFDFVEINGMKLSEPRQAYVQILKQLSGKVSTWEQAYNMLEKKFNSSAKRP-MTLLLVDELDLLCTKRQDVIYNLLDWPTKASARLV 375          
BLAST of mRNA_H-elongata_contig58593.13349.1 vs. uniprot
Match: UPI0005F3DDE5 (origin recognition complex subunit 1 n=1 Tax=Vollenhovia emeryi TaxID=411798 RepID=UPI0005F3DDE5)

HSP 1 Score: 87.8 bits (216), Expect = 1.160e-15
Identity = 50/162 (30.86%), Postives = 82/162 (50.62%), Query Frame = 1
Query:  433 LQSVLEALQPSNAPPSLLKQRVAEYNQVLRFIRESISQSWGGSLYLCGCPGTGKTQTMTHVQEEIQRMVAKGKIPKPEFYDFRGTAFTEPDSMHNDLWHAIAGGVSPPHGVEKALRRRLTRSKNSAAMIVVVVDEIDQLMYQNRDVLRKLFEWADAPKSRLV 918
            LQ +   L  S  P SL   R  E+N +  F+   +  + GGS+Y+ G PGTGKT T+  + + ++R V KGK+   +F +  G   +EP   +  +   ++G V         L +R   S    +M +++VDE+D L  + +DV+  L +W     +RLV
Sbjct:  202 LQELRTRLHVSAVPKSL-PCREEEFNNIYTFLESKLKDNSGGSIYINGVPGTGKTATVNEIMKCLKRSVEKGKLDYFDFVEINGMKLSEPRQAYVQILKQLSGQVLTWEQAYNTLEKRFN-SNAKRSMTLLLVDELDLLCTKRQDVIYNLLDWPTKASARLV 361          
BLAST of mRNA_H-elongata_contig58593.13349.1 vs. uniprot
Match: UPI00053C6F27 (cell division control protein 6 homolog n=1 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C6F27)

HSP 1 Score: 87.4 bits (215), Expect = 1.410e-15
Identity = 50/166 (30.12%), Postives = 89/166 (53.61%), Query Frame = 1
Query:  433 LQSVLEALQPSNAPPSLLKQRVAEYNQVLRFIRESISQSWGGSLYLCGCPGTGKTQTMTHVQEEIQRMVAKGKIPKPEFYDFRGTAFTEPDSMHNDLW--HAIAGGVSPPHGVEKALRRRLTRSKNSAA--MIVVVVDEIDQLMYQNRDVLRKLFEWADAPKSRLV 918
            L++V EAL  S AP S++  R  E   V  F+++ + Q   GSLY+CGCPGTGK+ +M  V++++     +  +P P+      T+ T    + N +   +   G V+      K L+   ++ + S +  M++++ DE+D L+ ++R +L  LF     P SR++
Sbjct:  113 LKAVKEALHVSRAPSSIVC-RDDEQRWVFEFVKDCVEQEKAGSLYICGCPGTGKSLSMERVKQQVNDWAKQEGLPSPDTVSVNCTSLTNAADIFNKILGENQAKGKVNGSSSPLKHLQNLFSQKQQSPSSKMMLIIADEMDYLITKDRGILHDLFMLTTLPFSRII 277          
BLAST of mRNA_H-elongata_contig58593.13349.1 vs. uniprot
Match: A0A6J1R5W3_9HYME (Origin recognition complex subunit 1 n=2 Tax=Temnothorax TaxID=300110 RepID=A0A6J1R5W3_9HYME)

HSP 1 Score: 87.0 bits (214), Expect = 2.430e-15
Identity = 50/162 (30.86%), Postives = 82/162 (50.62%), Query Frame = 1
Query:  433 LQSVLEALQPSNAPPSLLKQRVAEYNQVLRFIRESISQSWGGSLYLCGCPGTGKTQTMTHVQEEIQRMVAKGKIPKPEFYDFRGTAFTEPDSMHNDLWHAIAGGVSPPHGVEKALRRRLTRSKNSAAMIVVVVDEIDQLMYQNRDVLRKLFEWADAPKSRLV 918
            LQ +   L  S  P SL   R  E+N +  F+   +  + GGS+Y+ G PGTGKT T+  + + ++R V KGK+   +F +  G   +EP   +  +   ++G V         L +R + S     M +++VDE+D L  + +DV+  L +W     +RLV
Sbjct:  382 LQEIRTRLHVSAVPKSL-PCREEEFNNIYTFLESKLMDNSGGSIYINGVPGTGKTATVNEILKCLKRAVEKGKLDHFDFVEINGMKLSEPRQAYVQILKQLSGKVLTWEQAYNMLEKRFS-SNAKRPMTLLLVDELDLLCTKRQDVIYNLLDWPTKASARLV 541          
BLAST of mRNA_H-elongata_contig58593.13349.1 vs. uniprot
Match: A0A195FXZ0_9HYME (Origin recognition complex subunit 1 n=12 Tax=Attini TaxID=143999 RepID=A0A195FXZ0_9HYME)

HSP 1 Score: 86.3 bits (212), Expect = 4.360e-15
Identity = 49/162 (30.25%), Postives = 82/162 (50.62%), Query Frame = 1
Query:  433 LQSVLEALQPSNAPPSLLKQRVAEYNQVLRFIRESISQSWGGSLYLCGCPGTGKTQTMTHVQEEIQRMVAKGKIPKPEFYDFRGTAFTEPDSMHNDLWHAIAGGVSPPHGVEKALRRRLTRSKNSAAMIVVVVDEIDQLMYQNRDVLRKLFEWADAPKSRLV 918
            LQ +   L  S  P SL   R  E+N +  F+   +  + GGS+Y+ G PGTGKT T+  + + ++R V KGK+ + +F +  G   +EP   +  +   ++G V         L ++   S     M +++VDE+D L  + +DV+  L +W     +RLV
Sbjct:  357 LQEIRTKLHVSAVPKSL-PCREEEFNNIYTFLESKLMDNSGGSIYINGVPGTGKTATVNEIVKCLKRSVEKGKLNRFDFVEINGMKLSEPRQAYVQILKQLSGKVVTWEQAYNMLEKKFN-SNAKRPMTLLLVDELDLLCTKRQDVIYNLLDWPTKASARLV 516          
BLAST of mRNA_H-elongata_contig58593.13349.1 vs. uniprot
Match: UPI00125D52C5 (cell division control protein 6 homolog B n=2 Tax=Ipomoea TaxID=4119 RepID=UPI00125D52C5)

HSP 1 Score: 85.5 bits (210), Expect = 6.550e-15
Identity = 51/168 (30.36%), Postives = 86/168 (51.19%), Query Frame = 1
Query:  433 LQSVLEALQPSNAPPSLLKQRVAEYNQVLRFIRESISQSWGGSLYLCGCPGTGKTQTMTHVQEEIQRMVAKGKIPKPEFYDFRGTAFTEPDSMHNDLWHAI------AGGVSPPHGVEKALRRRLTRSKNSAAMIVVVVDEIDQLMYQNRDVLRKLFEWADAPKSRLV 918
            L +V EAL  S AP +++  R AE N+VL F ++ + Q   GSLY+ GCPGTGK+ ++  V+E +     K    +P+      T+ T+   + N +   I      +G  +P   ++        + +   +M++++ DE+D L+ Q+R VL  LF     P SR +
Sbjct:  119 LNAVKEALHVSTAPSTIMC-RDAEQNRVLEFCKQCVEQGKAGSLYVSGCPGTGKSLSIEKVKEALVDWAKKVNFQQPDILTINCTSLTKTSEIFNKILEKIQPKKKLSGSTTPLQLLQNLFS---LKQQAGTSMMLIIADELDYLITQDRAVLHDLFMLTTFPSSRCI 282          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig58593.13349.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJK0_ECTSI3.400e-6040.45AAA domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A484L3T8_9ASTE4.390e-1631.74Cell division control protein n=3 Tax=Cuscuta sect... [more]
UPI0008736D4D5.900e-1633.11origin recognition complex subunit 1 n=1 Tax=Anopl... [more]
UPI000580E6846.380e-1630.86origin recognition complex subunit 1 isoform X7 n=... [more]
UPI000580EEE36.490e-1630.86origin recognition complex subunit 1 isoform X6 n=... [more]
UPI0005F3DDE51.160e-1530.86origin recognition complex subunit 1 n=1 Tax=Volle... [more]
UPI00053C6F271.410e-1530.12cell division control protein 6 homolog n=1 Tax=Ta... [more]
A0A6J1R5W3_9HYME2.430e-1530.86Origin recognition complex subunit 1 n=2 Tax=Temno... [more]
A0A195FXZ0_9HYME4.360e-1530.25Origin recognition complex subunit 1 n=12 Tax=Atti... [more]
UPI00125D52C56.550e-1530.36cell division control protein 6 homolog B n=2 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig58593contigH-elongata_contig58593:2475..3595 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score216.5
Seed ortholog evalue1.7e-53
Seed eggNOG ortholog2880.D7FJK0
Preferred nameCDC6
KEGG koko:K02213,ko:K02603,ko:K02606
KEGG Pathwayko04110,ko04111,ko04113,map04110,map04111,map04113
KEGG ModuleM00284
GOsGO:0000075,GO:0000076,GO:0000079,GO:0000082,GO:0000083,GO:0000166,GO:0000228,GO:0000278,GO:0000793,GO:0000794,GO:0000922,GO:0001932,GO:0001934,GO:0003674,GO:0003682,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005730,GO:0005737,GO:0005819,GO:0005829,GO:0005856,GO:0006139,GO:0006259,GO:0006260,GO:0006275,GO:0006355,GO:0006725,GO:0006807,GO:0007049,GO:0007088,GO:0007089,GO:0007346,GO:0008150,GO:0008152,GO:0008156,GO:0008284,GO:0008285,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009987,GO:0010468,GO:0010556,GO:0010558,GO:0010562,GO:0010564,GO:0010604,GO:0010605,GO:0010965,GO:0015630,GO:0019219,GO:0019220,GO:0019222,GO:0019899,GO:0019900,GO:0022402,GO:0030071,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031399,GO:0031401,GO:0031570,GO:0031974,GO:0031981,GO:0032268,GO:0032270,GO:0032465,GO:0032467,GO:0033043,GO:0033044,GO:0033045,GO:0033047,GO:0033674,GO:0034641,GO:0034645,GO:0036094,GO:0042127,GO:0042325,GO:0042327,GO:0043085,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043549,GO:0044093,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044464,GO:0044770,GO:0044772,GO:0044843,GO:0045737,GO:0045786,GO:0045787,GO:0045859,GO:0045860,GO:0045931,GO:0045934,GO:0045937,GO:0046483,GO:0048145,GO:0048146,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050790,GO:0050794,GO:0051052,GO:0051053,GO:0051128,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051233,GO:0051246,GO:0051247,GO:0051252,GO:0051302,GO:0051338,GO:0051347,GO:0051726,GO:0051781,GO:0051783,GO:0051983,GO:0051984,GO:0060255,GO:0065007,GO:0065009,GO:0070013,GO:0071704,GO:0071900,GO:0071902,GO:0080090,GO:0090068,GO:0090304,GO:0097159,GO:1900087,GO:1901265,GO:1901360,GO:1901363,GO:1901576,GO:1901987,GO:1901989,GO:1901990,GO:1901992,GO:1902099,GO:1902806,GO:1902808,GO:1903047,GO:1903506,GO:1904029,GO:1904031,GO:1905818,GO:2000045,GO:2000112,GO:2000113,GO:2001141
EggNOG free text desc.DNA replication initiation
EggNOG OGsCOG1474@1,KOG2227@2759
COG Functional cat.LO
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03032,ko03036
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionP-loop containing nucleoside triphosphate hydrolase
Ec32 orthologEc-04_006400.1
Exons2
Model size918
Cds size897
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig58593.13349.1prot_H-elongata_contig58593.13349.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig58593 2496..3595 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930949.8728065-UTR-H-elongata_contig58593:2474..24951622930949.8728065-UTR-H-elongata_contig58593:2474..2495Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig58593 2475..2495 +
1691679637.285937-UTR-H-elongata_contig58593:2474..24951691679637.285937-UTR-H-elongata_contig58593:2474..2495Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig58593 2475..2495 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930949.8910997-CDS-H-elongata_contig58593:2495..31191622930949.8910997-CDS-H-elongata_contig58593:2495..3119Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig58593 2496..3119 +
1691679637.2974977-CDS-H-elongata_contig58593:2495..31191691679637.2974977-CDS-H-elongata_contig58593:2495..3119Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig58593 2496..3119 +
1622930949.9045799-CDS-H-elongata_contig58593:3322..35951622930949.9045799-CDS-H-elongata_contig58593:3322..3595Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig58593 3323..3595 +
1691679637.3059099-CDS-H-elongata_contig58593:3322..35951691679637.3059099-CDS-H-elongata_contig58593:3322..3595Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig58593 3323..3595 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig58593.13349.1

>prot_H-elongata_contig58593.13349.1 ID=prot_H-elongata_contig58593.13349.1|Name=mRNA_H-elongata_contig58593.13349.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=299bp
MREVGIGMDEVFKKLISKLIKIGWRYTNSPVSLLGSDTWIVKPGFSIGKA
RVGVEKFETPEAVVKYVQEVLKFGSGSTLGGMDKGKEGKTHQRPDTPSEE
QDILNEDMEVCDDEIEENERGTVELGHGAELSPGCQVLQSVLEALQPSNA
PPSLLKQRVAEYNQVLRFIRESISQSWGGSLYLCGCPGTGKTQTMTHVQE
EIQRMVAKGKIPKPEFYDFRGTAFTEPDSMHNDLWHAIAGGVSPPHGVEK
ALRRRLTRSKNSAAMIVVVVDEIDQLMYQNRDVLRKLFEWADAPKSRLV
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mRNA from alignment at H-elongata_contig58593:2475..3595+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig58593.13349.1 ID=mRNA_H-elongata_contig58593.13349.1|Name=mRNA_H-elongata_contig58593.13349.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1121bp|location=Sequence derived from alignment at H-elongata_contig58593:2475..3595+ (Himanthalia elongata Himel1 dioecious)
AGGGAGTCTGAAGCGGCAGCGATGCGAGAGGTAGGAATCGGCATGGACGA AGTATTTAAGAAACTGATTTCTAAGCTGATAAAGATAGGTTGGAGGTATA CAAATAGTCCCGTCTCTCTGCTCGGATCAGACACTTGGATAGTCAAACCG GGATTCAGCATCGGCAAAGCTCGCGTAGGCGTGGAAAAATTCGAGACACC GGAGGCCGTTGTGAAGTACGTACAAGAGGTCTTGAAATTTGGCTCAGGAA GTACATTGGGTGGCATGGACAAGGGCAAAGAAGGGAAGACCCACCAGCGG CCGGATACACCTTCGGAGGAGCAAGATATCCTAAATGAAGATATGGAGGT TTGTGATGATGAAATCGAGGAAAACGAACGGGGAACAGTCGAGCTGGGAC ATGGTGCCGAGCTCTCGCCCGGCTGTCAGGTCCTACAGTCCGTGCTGGAA GCATTGCAACCGTCGAACGCGCCACCATCTCTTCTAAAGCAGCGCGTGGC AGAATACAACCAGGTACTCCGCTTCATCAGGGAGAGCATATCTCAATCCT GGGGGGGTAGCTTGTACCTCTGCGGCTGTCCTGGAACAGGGAAGACGCAG ACGATGACCCATGTGCAGGAGGAGATCCAGCGTATGGTGGCTAAGGTAAG TTTTCCGTAGCCATTTTTGCCATAAACCGTATGTCGAGAGCAAACCAACA AGCGGCTAAATGGATGGAAAAAGAAGGTTGTCACGTTGTGTAAGATAATT TAATCTTGACCAATTATTGTGGTTCGCGTAAGGCTCATTTTTGTTAACCT TGCGATGTGCGCTTTTCCCCACATCTCTCTCGCCCACACGCTTCTCAGGG GAAAATCCCAAAGCCGGAATTCTACGATTTTAGAGGCACTGCGTTCACGG AGCCCGACTCGATGCACAACGATCTATGGCACGCGATAGCTGGTGGCGTA AGCCCTCCCCACGGCGTCGAGAAGGCTCTCCGTAGAAGGCTTACGCGTTC CAAGAATTCGGCCGCAATGATCGTGGTTGTGGTGGACGAAATTGACCAGC TCATGTATCAAAATCGCGACGTCTTACGCAAGCTCTTCGAATGGGCGGAT GCACCCAAGTCTCGTTTGGTG
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Coding sequence (CDS) from alignment at H-elongata_contig58593:2475..3595+

>mRNA_H-elongata_contig58593.13349.1 ID=mRNA_H-elongata_contig58593.13349.1|Name=mRNA_H-elongata_contig58593.13349.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1794bp|location=Sequence derived from alignment at H-elongata_contig58593:2475..3595+ (Himanthalia elongata Himel1 dioecious)
ATGCGAGAGGTAGGAATCGGCATGGACGAAGTATTTAAGAAACTGATTTC
TAAGCTGATAAAGATAGGTTGGAGGTATACAAATAGTCCCGTCTCTCTGC
TCGGATCAGACACTTGGATAGTCAAACCGGGATTCAGCATCGGCAAAGCT
CGCGTAGGCGTGGAAAAATTCGAGACACCGGAGGCCGTTGTGAAGTACGT
ACAAGAGGTCTTGAAATTTGGCTCAGGAAGTACATTGGGTGGCATGGACA
AGGGCAAAGAAGGGAAGACCCACCAGCGGCCGGATACACCTTCGGAGGAG
CAAGATATCCTAAATGAAGATATGGAGGTTTGTGATGATGAAATCGAGGA
AAACGAACGGGGAACAGTCGAGCTGGGACATGGTGCCGAGCTCTCGCCCG
GCTGTCAGGTCCTACAGTCCGTGCTGGAAGCATTGCAACCGTCGAACGCG
CCACCATCTCTTCTAAAGCAGCGCGTGGCAGAATACAACCAGGTACTCCG
CTTCATCAGGGAGAGCATATCTCAATCCTGGGGGGGTAGCTTGTACCTCT
GCGGCTGTCCTGGAACAGGGAAGACGCAGACGATGACCCATGTGCAGGAG
GAGATCCAGCGTATGGTGGCTAAGATGCGAGAGGTAGGAATCGGCATGGA
CGAAGTATTTAAGAAACTGATTTCTAAGCTGATAAAGATAGGTTGGAGGT
ATACAAATAGTCCCGTCTCTCTGCTCGGATCAGACACTTGGATAGTCAAA
CCGGGATTCAGCATCGGCAAAGCTCGCGTAGGCGTGGAAAAATTCGAGAC
ACCGGAGGCCGTTGTGAAGTACGTACAAGAGGTCTTGAAATTTGGCTCAG
GAAGTACATTGGGTGGCATGGACAAGGGCAAAGAAGGGAAGACCCACCAG
CGGCCGGATACACCTTCGGAGGAGCAAGATATCCTAAATGAAGATATGGA
GGTTTGTGATGATGAAATCGAGGAAAACGAACGGGGAACAGTCGAGCTGG
GACATGGTGCCGAGCTCTCGCCCGGCTGTCAGGTCCTACAGTCCGTGCTG
GAAGCATTGCAACCGTCGAACGCGCCACCATCTCTTCTAAAGCAGCGCGT
GGCAGAATACAACCAGGTACTCCGCTTCATCAGGGAGAGCATATCTCAAT
CCTGGGGGGGTAGCTTGTACCTCTGCGGCTGTCCTGGAACAGGGAAGACG
CAGACGATGACCCATGTGCAGGAGGAGATCCAGCGTATGGTGGCTAAGGG
GAAAATCCCAAAGCCGGAATTCTACGATTTTAGAGGCACTGCGTTCACGG
AGCCCGACTCGATGCACAACGATCTATGGCACGCGATAGCTGGTGGCGTA
AGCCCTCCCCACGGCGTCGAGAAGGCTCTCCGTAGAAGGCTTACGCGTTC
CAAGAATTCGGCCGCAATGATCGTGGTTGTGGTGGACGAAATTGACCAGC
TCATGTATCAAAATCGCGACGTCTTACGCAAGCTCTTCGAATGGGCGGAT
GCACCCAAGTCTCGTTTGGTGGGGAAAATCCCAAAGCCGGAATTCTACGA
TTTTAGAGGCACTGCGTTCACGGAGCCCGACTCGATGCACAACGATCTAT
GGCACGCGATAGCTGGTGGCGTAAGCCCTCCCCACGGCGTCGAGAAGGCT
CTCCGTAGAAGGCTTACGCGTTCCAAGAATTCGGCCGCAATGATCGTGGT
TGTGGTGGACGAAATTGACCAGCTCATGTATCAAAATCGCGACGTCTTAC
GCAAGCTCTTCGAATGGGCGGATGCACCCAAGTCTCGTTTGGTG
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