mRNA_H-elongata_contig58589.13348.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig58589.13348.1 vs. uniprot
Match: D7FKU0_ECTSI (Putative serine rich protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKU0_ECTSI) HSP 1 Score: 193 bits (490), Expect = 1.260e-54 Identity = 94/174 (54.02%), Postives = 112/174 (64.37%), Query Frame = 1
Query: 13 NITFMENMGGTEGCAGTWDICGGNSQTYADASGASCSSSPMSFSGDLEGDNEMNIMTAVECTSTAECGFYRDVGMRGWRGGNDGTKAFIFEVDMPHCGETCVWNRPAVWALNARVLRTAQYGCNCRGMGGNGGCGEFDILEAIIGSPYSDMLLTNVYDFKGTGSPGPLAYFERP 534
N+ FM N GG C+G W ICGG+SQ+YAD +G+SC+S P FSG L GD +NIMT+ EC + CGFYRD GM GW GG DG+K V+RTAQYGCNCRG GGNGGCGEFDI+EA+IG ++DM+ T VYDFKGTG+PG YF RP
Sbjct: 513 NLVFMTNQGGYTECSGEWTICGGSSQSYADETGSSCASEPKQFSGVLGGDQGVNIMTSTECADDSTCGFYRDTGMEGWSGGLDGSK----------------------------VVRTAQYGCNCRGAGGNGGCGEFDIVEAVIGVDHADMMFTTVYDFKGTGAPGHGKYFNRP 658
BLAST of mRNA_H-elongata_contig58589.13348.1 vs. uniprot
Match: A0A165PHX7_9AGAM (Uncharacterized protein n=1 Tax=Neolentinus lepideus HHB14362 ss-1 TaxID=1314782 RepID=A0A165PHX7_9AGAM) HSP 1 Score: 163 bits (412), Expect = 7.800e-46 Identity = 84/178 (47.19%), Postives = 117/178 (65.73%), Query Frame = 1
Query: 7 GQNITFMENMGGTEGCAGTWDICGGNSQTYADASGASCSSSP--MSFSGDLEGDNEMNIMTAVECTSTAECGFYRDVGMRGWRGGNDGTKAFIFEVDMPHCGETCVWNRPAVWALNARVLRTAQYGCNCRGMGGNGGCGEFDILEAIIGSPYSDMLLTNVYDFKGTGSPGPLAYFERP 534
G N+ FM N GG+ +GTW IC G+SQ+YA+A+ + ++SP +S++GDL E+NIMT +ECT+++ GF+R GW +K FI EV+MP G T PA+WALNA+++R+AQYGCNCRG+G +GGCGE D++E I G + + + VY FKG G AYF RP
Sbjct: 124 GSNLVFMNNKGGST--SGTWSICAGSSQSYANAAFSDAAASPTGLSYAGDLPDGQEVNIMTDIECTASSCDGFFRGTANEGWAD----SKMFIMEVEMPSGGST----PPAIWALNAQIVRSAQYGCNCRGVGADGGCGELDVVEVISGQDQNQGI-SEVYSFKGATGTGSSAYFTRP 290
BLAST of mRNA_H-elongata_contig58589.13348.1 vs. uniprot
Match: A0A5C3NAV2_9AGAM (Uncharacterized protein n=1 Tax=Heliocybe sulcata TaxID=5364 RepID=A0A5C3NAV2_9AGAM) HSP 1 Score: 155 bits (391), Expect = 1.130e-42 Identity = 82/178 (46.07%), Postives = 115/178 (64.61%), Query Frame = 1
Query: 7 GQNITFMENMGGTEGCAGTWDICGGNSQTYADASGASCSSSP--MSFSGDLEGDNEMNIMTAVECTSTAECGFYRDVGMRGWRGGNDGTKAFIFEVDMPHCGETCVWNRPAVWALNARVLRTAQYGCNCRGMGGNGGCGEFDILEAIIGSPYSDMLLTNVYDFKGTGSPGPLAYFERP 534
G N+ FM N GG+ +GTW ICGG+SQ+YA+A+ + +SSP ++++G+L E+NIMT ECTS+ GF+R W G +K F+ EV+MP G T PA+WALN++++R+AQYGCNCRG+G GGCGE DI+E I G + + + +Y FKG G A+F RP
Sbjct: 129 GDNLVFMNNKGGST--SGTWSICGGSSQSYANAAFSDAASSPNGLAYAGNLPDGQEVNIMTNTECTSSTCDGFFRGTANEAWAG----SKMFVMEVEMPSGGST----PPAIWALNSQIVRSAQYGCNCRGVGSPGGCGELDIVEVITGQDQNQGI-SELYSFKGATGSGS-AFFTRP 294
BLAST of mRNA_H-elongata_contig58589.13348.1 vs. uniprot
Match: A0A250IPV1_9DELT (Uncharacterized protein n=2 Tax=Melittangium boletus TaxID=83453 RepID=A0A250IPV1_9DELT) HSP 1 Score: 151 bits (382), Expect = 4.030e-41 Identity = 85/185 (45.95%), Postives = 110/185 (59.46%), Query Frame = 1
Query: 4 GGQNITFMENMGGTEGCAGTWDICGGNSQTYADASGASCSSSPMSFSGDLEGDNEMNIMTAVECTST---AECGFYRDVGMRGWRGGNDGTKAFIFEVDMP-HCGETCVW--NRPAVWALNARVLRTAQYGCNCRGMGGNGGCGEFDILEAIIG-SPYSDMLLTNVYDFKGTGSPGPLAYFERPL 537
G N+TF N+GGT +G W +CGGNSQ+YA A G + +++P F+G L EMNI++ C T +ECGFYR V GW G K F MP + G + + PA+W LNARV+RTAQYGCNCRGMG GGCGE D+ E + G SP + +Y F+G GP YF+RP+
Sbjct: 165 GSTNLTFFNNLGGTG--SGEWTLCGGNSQSYASADGKTAAAAPTRFTGSLANRTEMNILSDQPCIGTGDSSECGFYRGVTRHGW----GGAKIFAIRARMPRYTGPKTEYYDDVPAIWMLNARVVRTAQYGCNCRGMGSPGGCGELDVAEVLHGESPLH--ATSTIYSFEGATGSGP-NYFQRPV 340
BLAST of mRNA_H-elongata_contig58589.13348.1 vs. uniprot
Match: S7RLB6_GLOTA (Uncharacterized protein n=1 Tax=Gloeophyllum trabeum (strain ATCC 11539 / FP-39264 / Madison 617) TaxID=670483 RepID=S7RLB6_GLOTA) HSP 1 Score: 149 bits (375), Expect = 2.440e-40 Identity = 77/178 (43.26%), Postives = 109/178 (61.24%), Query Frame = 1
Query: 7 GQNITFMENMGGTEGCAGTWDICGGNSQTYADASGASCSSSPMS--FSGDLEGDNEMNIMTAVECTSTAECGFYRDVGMRGWRGGNDGTKAFIFEVDMPHCGETCVWNRPAVWALNARVLRTAQYGCNCRGMGGNGGCGEFDILEAIIGSPYSDMLLTNVYDFKGTGSPGPLAYFERP 534
G N+ FM N GG+ +G W ICGG+SQ+YA+ + ++SP + ++G+L E+NIMT+ CTS+ GF+R GW +K F+ EV+MP G T PA+WALN +++R+AQYGCNCRG G GGCGE D++E I G + + + +Y FKG G A+F RP
Sbjct: 126 GSNLVFMNNKGGST--SGEWSICGGSSQSYANGAFTDAAASPSASTYTGNLPDGQEVNIMTSTACTSSTCDGFFRGTANLGWAD----SKMFVMEVEMPSGGST----PPAIWALNGQIVRSAQYGCNCRGQGSPGGCGELDVVEVISGQDQNQGI-SEIYSFKGATGTGSDAFFSRP 292
BLAST of mRNA_H-elongata_contig58589.13348.1 vs. uniprot
Match: A0A067PK89_9AGAM (Uncharacterized protein n=1 Tax=Jaapia argillacea MUCL 33604 TaxID=933084 RepID=A0A067PK89_9AGAM) HSP 1 Score: 149 bits (375), Expect = 2.440e-40 Identity = 82/181 (45.30%), Postives = 109/181 (60.22%), Query Frame = 1
Query: 1 SGGQ--NITFMENMGGTEGCAGTWDICGGNSQTYADASGASCSSSPMSFSGDLEGDNEMNIMTAVECTSTAEC-GFYRDVGMRGWRGGNDGTKAFIFEVDMPHCGETCVWNRPAVWALNARVLRTAQYGCNCRGMGGNGGCGEFDILEAIIGSPYSDMLLTNVYDFKGTGSPGPLAYFERP 534
SGG+ N+ FM N GG G +G W ICGG+SQ+YA+++ + ++SP + G + EMNIMT+ C+S++ C GF R GW +K F+ E DMP T PA+WALNA+V+R AQYGCNCRGMG GGCGE DILE + + ++ +Y FKG G YF RP
Sbjct: 122 SGGKPSNLVFMNNKGG--GASGMWSICGGSSQSYANSAFSDAAASPQTPQGSIPVGEEMNIMTSTACSSSSPCSGFSRGTANHGWAQ----SKMFVLEFDMP--STTSSSQPPAIWALNAQVVRAAQYGCNCRGMGSPGGCGELDILENLPSPANVNQGISEIYSFKGATGTGNGNYFPRP 294
BLAST of mRNA_H-elongata_contig58589.13348.1 vs. uniprot
Match: UPI0004416550 (hypothetical protein n=1 Tax=Punctularia strigosozonata (strain HHB-11173) TaxID=741275 RepID=UPI0004416550) HSP 1 Score: 149 bits (375), Expect = 2.650e-40 Identity = 78/175 (44.57%), Postives = 107/175 (61.14%), Query Frame = 1
Query: 13 NITFMENMGGTEGCAGTWDICGGNSQTYADASGASCSSSPMSFSGD-LEGDNEMNIMTAVECTSTAECGFYRDVGMRGWRGGNDGTKAFIFEVDMPHCGETCVWNRPAVWALNARVLRTAQYGCNCRGMGGNGGCGEFDILEAIIGSPYSDMLLTNVYDFKGTGSPGPLAYFERP 534
N+ FM N GG G +G W ICGG SQ+YA + +S ++SP G + +E+NIMTA EC + GFYR GW G +K F+FE DMP ++ PA+WALN +V+R+AQYGCNCRG GG GGCGE D++E ++ + ++ + + +Y FKG G YF RP
Sbjct: 130 NLVFMNNNGG--GASGEWSICGGASQSYASSDFSSAAASPKQTYGSYISASDEVNIMTATECNGSNCEGFYRGTSNLGWAG----SKMFVFEFDMPSDSDSVT---PAIWALNGQVVRSAQYGCNCRGEGGEGGCGEIDLVENLVDADHNQGI-SEIYSFKGATGTGTGNYFARP 294
BLAST of mRNA_H-elongata_contig58589.13348.1 vs. uniprot
Match: UPI00193AE6C3 (DUF2403 domain-containing lipoprotein n=2 Tax=Archangium violaceum TaxID=83451 RepID=UPI00193AE6C3) HSP 1 Score: 149 bits (376), Expect = 3.840e-40 Identity = 85/184 (46.20%), Postives = 108/184 (58.70%), Query Frame = 1
Query: 4 GGQNITFMENMGGTEGCAGTWDICGGNSQTYADASGASCSSSPMSFSGDLEGDNEMNIMTAVECTST---AECGFYRDVGMRGWRGGNDGTKAFIFEVDMP-HCGETCVW--NRPAVWALNARVLRTAQYGCNCRGMGGNGGCGEFDILEAIIGSPYSDMLLTNVYDFKGTGSPGPLAYFERPL 537
G N+TF N+GGT +G W +CGGNSQ+YA A + ++P F+G LE EMNI++ C T +ECGFYR V GW G K F V MP + G + + PA+W LNARV+RTAQYGCNCRGMG GGCGE D+ E I G + + +Y F+G GP YF RP+
Sbjct: 176 GSTNLTFFNNLGGTG--SGEWTLCGGNSQSYASADAKTAVAAPTRFNGTLENRVEMNILSDEPCNGTGDASECGFYRGVTRHGWAG----AKIFAIRVRMPRYTGPITEYYDDVPAIWMLNARVVRTAQYGCNCRGMGSPGGCGELDVAEVIHGE-HPMHATSTLYSFEGATGSGP-NYFMRPV 351
BLAST of mRNA_H-elongata_contig58589.13348.1 vs. uniprot
Match: S9NXG9_9DELT (Uncharacterized protein n=3 Tax=Cystobacter TaxID=42 RepID=S9NXG9_9DELT) HSP 1 Score: 147 bits (370), Expect = 2.770e-39 Identity = 81/182 (44.51%), Postives = 105/182 (57.69%), Query Frame = 1
Query: 13 NITFMENMGGTEGCAGTWDICGGNSQTYADASGASCSSSPMSFSGDLEGDNEMNIMTAVECTST---AECGFYRDVGMRGWRGGNDGTKAFIFEVDMPHCGETCVW---NRPAVWALNARVLRTAQYGCNCRGMGGNGGCGEFDILEAIIGSPYSDMLLTN-VYDFKGTGSPGPLAYFERPL 537
N+TF N+GG +G W +CGGNSQ+YA A G + +P F+G L E+NI++ C T +ECGFYR V GW G K F MP E + PA+W LNARV+RTAQYGCNCRGMG GGCGE D+ E + G + + T+ +Y F+G GP YF+RP+
Sbjct: 175 NLTFFNNLGGGN-VSGEWTVCGGNSQSYASADGKKAAVAPTRFNGSLANRTELNILSDKACVGTGDSSECGFYRGVTRHGW----GGAKIFAIRARMPRYTEPKTQYYDDVPAIWMLNARVVRTAQYGCNCRGMGSPGGCGELDVAEVLHGD--NPLYATSTIYSFEGATGSGP-NYFQRPV 348
BLAST of mRNA_H-elongata_contig58589.13348.1 vs. uniprot
Match: A0A4R0RUG8_9APHY (Uncharacterized protein n=1 Tax=Steccherinum ochraceum TaxID=92696 RepID=A0A4R0RUG8_9APHY) HSP 1 Score: 145 bits (365), Expect = 6.910e-39 Identity = 77/176 (43.75%), Postives = 102/176 (57.95%), Query Frame = 1
Query: 13 NITFMENMGGTEGCAGTWDICGGNSQTYADASGASCSSSPMS--FSGDLEGDNEMNIMTAVECTSTAECGFYRDVGMRGWRGGNDGTKAFIFEVDMPHCGETCVWNRPAVWALNARVLRTAQYGCNCRGMGGNGGCGEFDILEAIIGSPYSDMLLTNVYDFKGTGSPGPLAYFERP 534
N+ FM N GG G +G WD CGGNSQ+Y++ ++SP + +S +L G E+NI+T C GF R GW G+KAFIFE DMP G + N PA+W LN +V+ AQYGCNCRGMGG+GGCGE D+ E + + +T +Y FKG G ++ RP
Sbjct: 125 NLVFMNNKGG--GASGEWDTCGGNSQSYSNGDFTDAAASPNADTYSANLPGTQEVNIVTGTSCADVPCDGFARGTASHGW----SGSKAFIFEFDMPSDGSS---NPPAIWLLNQQVVNAAQYGCNCRGMGGSGGCGELDVFEVLPTNLQQG--ITEIYSFKGATGGGDGNFWARP 289 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig58589.13348.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig58589.13348.1 >prot_H-elongata_contig58589.13348.1 ID=prot_H-elongata_contig58589.13348.1|Name=mRNA_H-elongata_contig58589.13348.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=171bp MENMGGTEGCAGTWDICGGNSQTYADASGASCSSSPMSFSGDLEGDNEMNback to top mRNA from alignment at H-elongata_contig58589:2322..3495- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig58589.13348.1 ID=mRNA_H-elongata_contig58589.13348.1|Name=mRNA_H-elongata_contig58589.13348.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1174bp|location=Sequence derived from alignment at H-elongata_contig58589:2322..3495- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig58589:2322..3495- >mRNA_H-elongata_contig58589.13348.1 ID=mRNA_H-elongata_contig58589.13348.1|Name=mRNA_H-elongata_contig58589.13348.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1026bp|location=Sequence derived from alignment at H-elongata_contig58589:2322..3495- (Himanthalia elongata Himel1 dioecious)back to top |