mRNA_H-elongata_contig58537.13341.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig58537.13341.1 vs. uniprot
Match: V5K3Y9_SACJA (Trehalose-6-phosohate synthase n=1 Tax=Saccharina japonica TaxID=88149 RepID=V5K3Y9_SACJA) HSP 1 Score: 291 bits (746), Expect = 2.630e-88 Identity = 147/201 (73.13%), Postives = 168/201 (83.58%), Query Frame = 1
Query: 1 CVSIESMHGGIEPSIISDYVNKSNMKQKEAELRSKFKDRFVFVGIDKVERLKGLQLKFTAFYKMLLEFPRLRDRVVMLQLGVSANEREQDYHKCLTELRKLADKANKEFAPSPDRPVLILQLEDETSFTLLKRIPYLSLADCLVNTAVRDGLNSLPLEYACVHESTRKKDPGVMLLSEFTSCMRVMRGAIRINPWKVRTAA 603
CVSIESMHGGIEPSII+ ++ + + AELR +++ RFVF+GIDKVERLKGLQLKFTAFYK LLE P L D++V+LQ+G+SA EREQDYHKCL ELR LA K N E APSPDRPVL+LQLEDE SF +R+PYL LADCL+NTAVRDGLN+LPLEY VHES RK +PGVM+LSEFTSCMRVMRGAIRINPWKV A
Sbjct: 414 CVSIESMHGGIEPSIIAANLSNPGIVGRAAELRKEYQGRFVFLGIDKVERLKGLQLKFTAFYKFLLERPHLADKIVLLQVGISALEREQDYHKCLNELRTLAQKINSECAPSPDRPVLVLQLEDEHSF---QRLPYLCLADCLINTAVRDGLNNLPLEYVFVHESARKNNPGVMMLSEFTSCMRVMRGAIRINPWKVEEVA 611
BLAST of mRNA_H-elongata_contig58537.13341.1 vs. uniprot
Match: D7FL73_ECTSI (Trehalose 6-phosphate synthase, family GT20 / Trehalose 6-phosphate phosphatase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FL73_ECTSI) HSP 1 Score: 283 bits (724), Expect = 2.370e-85 Identity = 140/201 (69.65%), Postives = 167/201 (83.08%), Query Frame = 1
Query: 1 CVSIESMHGGIEPSIISDYVNKSNMKQKEAELRSKFKDRFVFVGIDKVERLKGLQLKFTAFYKMLLEFPRLRDRVVMLQLGVSANEREQDYHKCLTELRKLADKANKEFAPSPDRPVLILQLEDETSFTLLKRIPYLSLADCLVNTAVRDGLNSLPLEYACVHESTRKKDPGVMLLSEFTSCMRVMRGAIRINPWKVRTAA 603
CVSIES+HGGIEPSII+ + +++ + A LR ++ R+VF+GIDKVERLKGLQLKFTAFYK+LLE+P L D +V+LQLG+S +EREQDYHKC +EL LA K N EFAPSPDRPVL+L+LEDE SFTL +RIPYL LADCL+NT+VRDGLNSLPLEY V +TR +PGV++LSEFTS MRVMRGAIRINPWKV A
Sbjct: 374 CVSIESIHGGIEPSIIAAKLGHTDIAGRVAALRKEYDGRYVFLGIDKVERLKGLQLKFTAFYKLLLEYPHLADTIVLLQLGISVSEREQDYHKCFSELSTLAKKINSEFAPSPDRPVLVLELEDENSFTLNRRIPYLCLADCLLNTSVRDGLNSLPLEYVQVQGATRVDNPGVLMLSEFTSAMRVMRGAIRINPWKVEEVA 574
BLAST of mRNA_H-elongata_contig58537.13341.1 vs. uniprot
Match: A0A835YZM5_9STRA (Glycosyltransferase family 20-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZM5_9STRA) HSP 1 Score: 188 bits (478), Expect = 1.020e-51 Identity = 109/224 (48.66%), Postives = 139/224 (62.05%), Query Frame = 1
Query: 4 VSIESMHGGIEPSIISDYVNKSNMKQKEAELRSKFKDRFVFVGIDKVERLKGLQLKFTAFYKMLLEFPRLRDRVVMLQ-------------LGVSANEREQDYHKCLTELRKLADKANKEFAPSPDRPVLILQLEDETSFTLLKRIPYLSLADCLVNTAVRDGLNSLPLEYACVHESTRKKDPGVMLLSE-----------FTSCMRVMRGAIRINPWKVRTAA 603
V+IES+H GIEP +I + + EL+ ++K RFVFVGIDKVERLKGL LK AF +ML P L +RV + +G+S +ERE D+ + EL LA N +++ RPV++ +DE SFTL +R+PYL LADCLVNTAVRDGLN LPLE+A H R + PGV++LSE FTSCMRV+RGA+RINPWKV A
Sbjct: 642 VTIESIHAGIEPKVIEIALQSGQLDPTIHELKQQYKGRFVFVGIDKVERLKGLPLKLMAFERMLEGDPELAERVCLXXXXXXXXXXXXXXXVGLSVHEREDDFEQSTKELISLATTINNKYSRG-GRPVVVYTDKDEASFTLQQRLPYLCLADCLVNTAVRDGLNRLPLEFAIAHTVHRPQCPGVVMLSEXXXXXXXXXXEFTSCMRVLRGAVRINPWKVDEVA 864
BLAST of mRNA_H-elongata_contig58537.13341.1 vs. uniprot
Match: A0A7S2UVC1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVC1_9STRA) HSP 1 Score: 174 bits (442), Expect = 4.800e-47 Identity = 86/200 (43.00%), Postives = 129/200 (64.50%), Query Frame = 1
Query: 4 VSIESMHGGIEPSIISDYVNKSNMKQKEAELRSKFKDRFVFVGIDKVERLKGLQLKFTAFYKMLLEFPRLRDRVVMLQLGVSANEREQDYHKCLTELRKLADKANKEFAPSPDRPVLILQLEDETSFTLLKRIPYLSLADCLVNTAVRDGLNSLPLEYACVHESTRKKDPGVMLLSEFTSCMRVMRGAIRINPWKVRTAA 603
V++ S H G++P ++D + ++++ +L F +F+FV IDKVERL+GLQLK + + L E P L D+VV+LQ+G++A ER++D+ +CL E+R ++ K F P R ++ + +L +R+ L+ ADC VNTAVRDGLN PLE+ H+ R PG++LLSEFTS MRV+RG + +NPWKV A
Sbjct: 195 VNVNSTHAGVDPDKVADVLAMPEVEEEMRQLEEAFSGKFLFVSIDKVERLRGLQLKLNGYERFLKENPELVDKVVLLQVGLNAPERDKDFSRCLDEVRAQVNRIRKRFGPQVLR---FVEGQGRHLASLTRRLALLARADCFVNTAVRDGLNKYPLEFVAAHKVIRPTQPGILLLSEFTSTMRVLRGPLHVNPWKVEEVA 391
BLAST of mRNA_H-elongata_contig58537.13341.1 vs. uniprot
Match: B7G068_PHATC (Bifunctional trehalose-6-phosphate synthase n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G068_PHATC) HSP 1 Score: 142 bits (357), Expect = 1.750e-35 Identity = 78/209 (37.32%), Postives = 125/209 (59.81%), Query Frame = 1
Query: 4 VSIESMHGGIEPSIISDYVNKSNMKQKEAELRSKFKDRFVFVGIDKVERLKGLQLKFTAFYKMLLEFPRLRDRVVMLQLGVSANEREQDYHKCLTELRKLADKANKEFAPSPDRPVLILQLED--ETSFTLLKRIPYLSLADCLVNTAVRDGLNSLPLEYACVHESTR----KKDP---GVMLLSEFTSCMRVMRGAIRINPWKVRTAA 603
V++ S+H G+EP +++ + S+ +K +R++F+ + +F GID++E LKG+ LK + L P ++V++Q+G+SA ER DY E+ KL DK N+E+ + +Q ++ E+ L +R+ L AD +V T++RDGLN LPLE+ H+ +KD G+ +LSEFTSC RVMRGA+ +NPWK+ A
Sbjct: 533 VAVTSIHAGVEPPVLNQILTHSSTVEKAGSIRNRFEGKHIFCGIDRLESLKGIPLKLLGLERFLRRCPEWVGKIVLVQVGISAFERGDDYSITKHEVVKLVDKINQEWPGT-------IQFQECYESEMRLQQRMALLRAADVVVVTSIRDGLNLLPLEFTTAHQDAMTEMGRKDGRKRGLCILSEFTSCTRVMRGALHVNPWKISEIA 734
BLAST of mRNA_H-elongata_contig58537.13341.1 vs. uniprot
Match: A0A7S2BW05_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BW05_9STRA) HSP 1 Score: 141 bits (355), Expect = 3.190e-35 Identity = 77/208 (37.02%), Postives = 116/208 (55.77%), Query Frame = 1
Query: 4 VSIESMHGGIEPSIISDYVNKSNMKQKEAELRSKFKDRFVFVGIDKVERLKGLQLKFTAFYKMLLEFPRLRDRVVMLQLGVSANEREQDYHKCLTELRKLADKANKEFAPSPDRPVLILQLEDETSFTLLKRIPYLSLADCLVNTAVRDGLNSLPLEYACVH--------ESTRKKDPGVMLLSEFTSCMRVMRGAIRINPWKVRTAA 603
V I MH G++PS + + ++++ L + R +FVG+D++ERLKG+ LK AF + L +VV+ Q+G+S R QDY + E+R L + N+ F P PV+I +E+ L R+ LS+AD L++T VRDGLN P EY E + PG+M+LS+FTSC RV+ GA+ +NPW++ A
Sbjct: 416 VLISCMHAGMDPSALYKALEDHQVQKEADRLNCLKRGRTMFVGMDRMERLKGVPLKLLAFERFLENNEEYSKKVVLHQIGMSVRARPQDYEQTTAEVRALVKRINERFG-DPQEPVVIYDEREESQLPLKDRLGLLSVADVLLSTTVRDGLNRWPFEYVLAQSQQQGPGSEYVESRPPGIMILSDFTSCTRVLHGALHVNPWQIDQVA 622
BLAST of mRNA_H-elongata_contig58537.13341.1 vs. uniprot
Match: A0A1Z5JS81_FISSO (Trehalose 6-phosphate synthase/phosphatase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JS81_FISSO) HSP 1 Score: 140 bits (354), Expect = 4.410e-35 Identity = 77/209 (36.84%), Postives = 123/209 (58.85%), Query Frame = 1
Query: 4 VSIESMHGGIEPSIISDYVNKSNMKQKEAELRSKFKDRFVFVGIDKVERLKGLQLKFTAFYKMLLEFPRLRDRVVMLQLGVSANEREQDYHKCLTELRKLADKANKEFAPSPDRPVLILQLEDETSFTLLKRIPYLSLADCLVNTAVRDGLNSLPLEYACVHEST---------RKKDPGVMLLSEFTSCMRVMRGAIRINPWKVRTAA 603
V++ S+H GIEP ++ + + ++ + LR++F D+ +F G+D++E LKG+ LK F + L P ++V++Q+G+ A ER +D+H+ +E LA K N+++ S + LQ+ E L +R+ L AD V T++RDGLN LPLE+ H+ RK+ G+ +LSEF+S RVMRGA+ INPWK+ A
Sbjct: 527 VAVTSIHAGIEPPVLRQVLIHQSTMERVSSLRTQFPDKIIFCGVDRLESLKGIPLKLLGFERFLTRCPEWVGKIVLIQVGIKAFERGEDFHRTESETCALAQKINEKWPGS-----VHLQILHEREIRLQQRVALLRAADVCVVTSIRDGLNLLPLEFTIAHQDALTDLGRADGRKR--GICILSEFSSSTRVMRGALHINPWKISEIA 728
BLAST of mRNA_H-elongata_contig58537.13341.1 vs. uniprot
Match: A0A7S2F9H1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2F9H1_9STRA) HSP 1 Score: 131 bits (329), Expect = 2.630e-32 Identity = 75/209 (35.89%), Postives = 117/209 (55.98%), Query Frame = 1
Query: 4 VSIESMHGGIEPSIISDYVNKSNMKQKEAELRSKFKDRFVFVGIDKVERLKGLQLKFTAFYKMLLEFPRLRDRVVMLQLGVSANEREQDYHKCLTELRKLADKANKEFAPSPDRPVLILQLEDETSFTLLKRIPYLSLADCLVNTAVRDGLNSLPLEYACVHEST---------RKKDPGVMLLSEFTSCMRVMRGAIRINPWKVRTAA 603
V I +H G++ ++ + ++++ +L K KD+ VF GID++ERLKG+ LK AF + L + P VV+ Q+ ++ ER DY +++ L ++ N +F + + PV+I +ET L R+ LS+AD L+ T VRDGLN P E+ + + PGVM+LSEFTSC RV++GA+ INPW + A
Sbjct: 221 VLITCIHAGMDQEVLHSVLQTQDVQRDINDLMRKTKDKTVFAGIDRMERLKGVPLKLLAFERFLEKNPTRAGNVVLYQISLAVRERGDDYSTTSAQVQALVNRINNKFGVNGE-PVVIFDEVEETHLQLKHRLALLSVADVLLVTTVRDGLNRWPFEFVLAQAAMGGEGSEYLIKPPVPGVMVLSEFTSCTRVLQGALHINPWCIDEVA 428
BLAST of mRNA_H-elongata_contig58537.13341.1 vs. uniprot
Match: A0A7S1VW85_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S1VW85_9STRA) HSP 1 Score: 128 bits (321), Expect = 4.420e-32 Identity = 71/209 (33.97%), Postives = 118/209 (56.46%), Query Frame = 1
Query: 4 VSIESMHGGIEPSIISDYVNKSNMKQKEAELRSKFKDRFVFVGIDKVERLKGLQLKFTAFYKMLLEFPRLRDRVVMLQLGVSANEREQDYHKCLTELRKLADKANKEFAPSPDRPVLILQLED--ETSFTLLKRIPYLSLADCLVNTAVRDGLNSLPLEYACVH-----ESTRK--KDPGVMLLSEFTSCMRVMRGAIRINPWKVRTAA 603
VS+ S+H G+EP ++ ++ + + A +R++F+ + +F ID++E LKG+ LK A + L P ++V++Q+G+SA ER DY K E+ + N + + +Q ++ E+ L +R+ L AD ++ T +RDGLN +PLE+ H E R + G+ +LSEF+SC RVMRGA+ +NPWK+ A
Sbjct: 103 VSVTSIHAGVEPPVLHQVLSHKSTCDRVASIRNQFRGKVIFAAIDRMESLKGIPLKLIALERFLQRCPEWAGKIVVVQVGISAFERGDDYTKTRNEIISMVTNINNRWPGT-------VQFQECAESEMRLQQRMALLRAADVVMVTTIRDGLNLIPLEFTIAHLDALTEQGRNDGRKRGLCILSEFSSCTRVMRGALHVNPWKISEIA 304
BLAST of mRNA_H-elongata_contig58537.13341.1 vs. uniprot
Match: A0A7S2PH62_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PH62_9STRA) HSP 1 Score: 128 bits (321), Expect = 2.100e-31 Identity = 71/209 (33.97%), Postives = 118/209 (56.46%), Query Frame = 1
Query: 4 VSIESMHGGIEPSIISDYVNKSNMKQKEAELRSKFKDRFVFVGIDKVERLKGLQLKFTAFYKMLLEFPRLRDRVVMLQLGVSANEREQDYHKCLTELRKLADKANKEFAPSPDRPVLILQLED--ETSFTLLKRIPYLSLADCLVNTAVRDGLNSLPLEYACVH-----ESTRK--KDPGVMLLSEFTSCMRVMRGAIRINPWKVRTAA 603
VS+ S+H G+EP ++ ++ + + A +R++F+ + +F ID++E LKG+ LK A + L P ++V++Q+G+SA ER DY K E+ + N + + +Q ++ E+ L +R+ L AD ++ T +RDGLN +PLE+ H E R + G+ +LSEF+SC RVMRGA+ +NPWK+ A
Sbjct: 243 VSVTSIHAGVEPPVLHQVLSHKSTCDRVASIRNQFRGKVIFAAIDRMESLKGIPLKLIALERFLQRCPEWAGKIVVVQVGISAFERGDDYTKTRNEIISMVTNINNRWPGT-------VQFQECAESEMRLQQRMALLRAADVVMVTTIRDGLNLIPLEFTIAHLDALTEQGRNDGRKRGLCILSEFSSCTRVMRGALHVNPWKISEIA 444 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig58537.13341.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig58537.13341.1 >prot_H-elongata_contig58537.13341.1 ID=prot_H-elongata_contig58537.13341.1|Name=mRNA_H-elongata_contig58537.13341.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=195bp MHGGIEPSIISDYVNKSNMKQKEAELRSKFKDRFVFVGIDKVERLKGLQLback to top mRNA from alignment at H-elongata_contig58537:1664..3665+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig58537.13341.1 ID=mRNA_H-elongata_contig58537.13341.1|Name=mRNA_H-elongata_contig58537.13341.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2002bp|location=Sequence derived from alignment at H-elongata_contig58537:1664..3665+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig58537:1664..3665+ >mRNA_H-elongata_contig58537.13341.1 ID=mRNA_H-elongata_contig58537.13341.1|Name=mRNA_H-elongata_contig58537.13341.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1170bp|location=Sequence derived from alignment at H-elongata_contig58537:1664..3665+ (Himanthalia elongata Himel1 dioecious)back to top |