mRNA_H-elongata_contig58530.13339.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig58530.13339.1 vs. uniprot
Match: D8LQ37_ECTSI (Choline/ethanolamine kinase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ37_ECTSI) HSP 1 Score: 223 bits (567), Expect = 6.130e-69 Identity = 108/149 (72.48%), Postives = 126/149 (84.56%), Query Frame = 1
Query: 1 GGGLTNLLYKLQGPPAETPVLVRIYGQNTDVLIDRERDNRLFNELANMGYAPPYLGRFSNGRIEGYLTARALEPLDMSHRSPVDFVSLIAREMARFHRLPVTAVGPVKGAEIWQVLHKWLQLAKGLTFKDADKASAVAALDLDWVYNQL 447
GGG+TNLL+KLQGPPAE +LVRI+G++TDVLIDRERDN LF+ELA+M YAPP+ GRFSNGRIEG+L ARALEP ++S+RSPVDFVSLIAREM R H L V GP AEIWQVL KWLQLAKGLTF+D KA+A+ ALDLDWV ++
Sbjct: 46 GGGITNLLFKLQGPPAEAAILVRIFGKDTDVLIDRERDNALFDELASMKYAPPFHGRFSNGRIEGFLPARALEPQELSNRSPVDFVSLIAREMGRLHGLQVANAGPPGEAEIWQVLPKWLQLAKGLTFEDESKAAAIKALDLDWVCEEV 194
BLAST of mRNA_H-elongata_contig58530.13339.1 vs. uniprot
Match: A0A812RMU7_9DINO (EMB1187 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812RMU7_9DINO) HSP 1 Score: 130 bits (327), Expect = 2.060e-33 Identity = 69/151 (45.70%), Postives = 93/151 (61.59%), Query Frame = 1
Query: 4 GGLTNLLYKLQGPPAETPVLVRIYGQNTDVLIDRERDNRLFNELANMGYAPPYLGRFSNGRIEGYLTARALEPLDMSHRSPVDFVSLIAREMARFHRLPVTAVGPVKGAEIWQVLHKWLQLAKGLTFK---DADKASAVAALDLDWVYNQL 447
GG+TNLL+K + VLVR++G T+++IDR+RDN LF++LA G+ P G F NGRIEG+ + ALEP M R PVDFV LIARE+AR H L + + +W L KWL A+ L FK + KA A LD+ W+ ++L
Sbjct: 58 GGITNLLFKASSE-GKDDVLVRVFGAKTEMMIDRQRDNLLFHKLAEAGFGPTMYGYFDNGRIEGWFPSAALEPSQMGQREPVDFVGLIARELARMHSLQIE---DDRTPTLWGQLDKWLAQAQALDFKGPGETAKAEKFAGLDVAWIASEL 204
BLAST of mRNA_H-elongata_contig58530.13339.1 vs. uniprot
Match: A0A7S2DLV9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DLV9_9STRA) HSP 1 Score: 121 bits (303), Expect = 3.540e-32 Identity = 60/148 (40.54%), Postives = 94/148 (63.51%), Query Frame = 1
Query: 7 GLTNLLYKLQGPPAETPVLVRIYGQNTDVLIDRERDNRLFNELANMGYAPPYLGRFSNGRIEGYLTA-RALEPLDMSHRSPVDFVSLIAREMARFHRLPVTAVGPVKGAEIWQVLHKWLQLAKGLTFKDADKASAVAALDLDWVYNQL 447
G+TN+LYK + VLVR++G+ DV+IDR+++N +F EL +G+ P G F NGRIE + R LEPL+M R+P+DFV++ AR++A HRL + G G +W L +W +LA+G++F + KA+ + L+L + +L
Sbjct: 1 GITNMLYKATPSGEGSAVLVRVFGEAGDVVIDRDKENIVFRELGRIGFGPSLFGTFKNGRIEQFFEGMRPLEPLEMIQRTPIDFVAMTARKLAEMHRLEIEP-GREAGPTLWLQLDEWFRLAQGISFSEPIKAARLEELNLAAIAEEL 147
BLAST of mRNA_H-elongata_contig58530.13339.1 vs. uniprot
Match: A0A7S1HVN9_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1HVN9_9EUGL) HSP 1 Score: 117 bits (292), Expect = 6.520e-30 Identity = 59/151 (39.07%), Postives = 92/151 (60.93%), Query Frame = 1
Query: 4 GGLTNLLYKLQGPPAETPVLVRIYGQNTDVLIDRERDNRLFNELANMGYAPPYLGRFSNGRIEGYLTARALEPLDMSHRSPVDFVSLIAREMARFHRLPVTAVGPVKGA---EIWQVLHKWLQLAKGLTFKDADKASAVAALDLDWVYNQL 447
GG+TNLLYK+ GP P+LVR+YG NTDV+IDR ++ + +L+++ +A P+ G F NGR+EGY R L+P ++ RSPVDF LIA +MA H L + P A +++ + W + A + K D+ + + +D+ +Y +L
Sbjct: 58 GGITNLLYKVSGPAV--PLLVRVYGDNTDVIIDRAKETNMLKQLSDVEFAVPFYGTFGNGRVEGYKELRPLKPEELGCRSPVDFQDLIAGQMAAMHSLKIDE--PENSACLPQLFAMTEMWAKSAMEIASKPQDRQALYSRIDVPKMYQEL 204
BLAST of mRNA_H-elongata_contig58530.13339.1 vs. uniprot
Match: A0A836CB42_9STRA (Choline/ethanolamine kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB42_9STRA) HSP 1 Score: 117 bits (294), Expect = 1.090e-28 Identity = 69/156 (44.23%), Postives = 89/156 (57.05%), Query Frame = 1
Query: 4 GGLTNLLYKLQGPPAETP-VLVRIYGQNTDVLIDRERDNRLFNELANMGYAPPYLGRFSNGRIEGYLTARALEPLDMSHRSPVDFVSLIAREMARFHRLPVTAVGPVKGAEIWQVLHKWLQLAKGLTFKDADKASAVAALDL-------DWVYNQL 447
GG+TN LY++ VLVR+YG NT+VLIDR DN + EL+ +G AP Y GRF NGR+EG+L A L+P M V LIA E+AR H L V A K A +W+ L +WL LA + F + DK +A+ AL L +W QL
Sbjct: 52 GGITNELYQVWPEDGTNGGVLVRVYGCNTEVLIDRAMDNTVSAELSKLGTAPTYHGRFENGRVEGFLAALPLQPTQMGEER---LVPLIAEELARMHCLDVHAGAARKEATVWRKLEEWLALASQVHFSEPDKQAALEALSLKGVAARVEWTRRQL 204
BLAST of mRNA_H-elongata_contig58530.13339.1 vs. uniprot
Match: K8Z7J7_NANGC (Ethanolamine kinase 1 isoform 1 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=K8Z7J7_NANGC) HSP 1 Score: 118 bits (295), Expect = 1.550e-28 Identity = 67/168 (39.88%), Postives = 96/168 (57.14%), Query Frame = 1
Query: 4 GGLTNLLYKLQGPPA------ETP--VLVRIYGQNTDVLIDRERDNRLFNELANMGYAPPYLGRFSNGRIEGYLTARALEPLDMSHR--------SPVDFVSLIAREMARFHRLPVTA---------------------VGPVKGAEIWQVLHKWLQLAKGLTFKDAD 396
GG+TNLLY+L P TP V+VRIYG+NT+V+IDRE++NRLF L+ + YAP Y GRF+NGR+EG+L AR L P +++ +PVDF+ +IAREMAR H L + + A +W+ + +W +LAK ++F+ D
Sbjct: 13 GGITNLLYRLALPSTCTLASPHTPRDVIVRIYGRNTEVIIDREKENRLFAALSAVQYAPTYWGRFTNGRVEGWLDARPLNPEELAMTGQRKGNGGTPVDFMGMIAREMARLHALQIEVDDEGGQAXXXXXXXXXXXXXXXXXXRKAVVWEKMEEWARLAKNISFEGPD 180
BLAST of mRNA_H-elongata_contig58530.13339.1 vs. uniprot
Match: A0A7S1HVZ4_9EUGL (Hypothetical protein n=2 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1HVZ4_9EUGL) HSP 1 Score: 115 bits (289), Expect = 6.090e-28 Identity = 58/151 (38.41%), Postives = 92/151 (60.93%), Query Frame = 1
Query: 4 GGLTNLLYKLQGPPAETPVLVRIYGQNTDVLIDRERDNRLFNELANMGYAPPYLGRFSNGRIEGYLTARALEPLDMSHRSPVDFVSLIAREMARFHRLPVTAVGPVKGA---EIWQVLHKWLQLAKGLTFKDADKASAVAALDLDWVYNQL 447
GG+TNLLYK+ GP P+LVR+YG NTDV+IDR ++ + +L+++ +A P+ G F NGR+EGY R L+P ++ RSPVDF LIA +MA H L + P A +++ + W + A + K D+ + + +D+ +Y ++
Sbjct: 58 GGITNLLYKVSGPAV--PLLVRVYGDNTDVIIDRAKETNMLKQLSDVEFAVPFYGTFGNGRVEGYKELRPLKPEELGCRSPVDFQDLIAGQMAAMHSLKIDE--PENSACLPQLFAMTEMWAKSAMEIASKPQDRQALYSRIDVPKMYQEV 204
BLAST of mRNA_H-elongata_contig58530.13339.1 vs. uniprot
Match: W7TCJ8_9STRA (Ethanolamine kinase 1 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TCJ8_9STRA) HSP 1 Score: 116 bits (291), Expect = 1.040e-27 Identity = 67/168 (39.88%), Postives = 96/168 (57.14%), Query Frame = 1
Query: 4 GGLTNLLYKLQGPPA------ETP--VLVRIYGQNTDVLIDRERDNRLFNELANMGYAPPYLGRFSNGRIEGYLTARALEPLDMSHR--------SPVDFVSLIAREMARFHRLPVTA---------------------VGPVKGAEIWQVLHKWLQLAKGLTFKDAD 396
GG+TNLLY+L P TP V+VRIYG+NT+V+IDRE++NRLF L+ + YAP Y GRF+NGR+EG+L AR L P +++ +PVDF+ +IAREMAR H L + + A +W+ + +W +LAK ++F+ D
Sbjct: 80 GGITNLLYRLALPSTCTLASPHTPRDVIVRIYGRNTEVIIDREKENRLFAALSAVQYAPRYWGRFTNGRVEGWLDARPLNPEELAMTGQRKGNGGTPVDFMGMIAREMARLHALQIEVDDEGGQAXXXXXXXXXXXXXXXXXXRKAVVWEKMEEWARLAKYISFEGPD 247
BLAST of mRNA_H-elongata_contig58530.13339.1 vs. uniprot
Match: F0WP82_9STRA (Ethanolamine kinase putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WP82_9STRA) HSP 1 Score: 115 bits (289), Expect = 1.800e-27 Identity = 59/141 (41.84%), Postives = 92/141 (65.25%), Query Frame = 1
Query: 4 GGLTNLLYKLQGPPAETPVLVRIYGQNTDVLIDRERDNRLFNELANMGYAPPYLGRFSNGRIEGYLTARALEPLDMSHRSPVDFVSLIAREMARFHRLPVTAVGPVKGAEIWQVLHKWLQLAKGLTFKDADKASAVAALDL 426
GG+TN LY+L +LVRIYG+NT++LIDR+ +N +F +L+ G+AP Y GRF NGRIEG+L A LEP DM P+ V IA+E+ + H + + + +W+ L++++QLA + F++A+K +A+ L+L
Sbjct: 163 GGITNQLYRLIWMGKS--LLVRIYGENTEILIDRKTENEIFAKLSREGFAPTYYGRFKNGRIEGWLNADPLEPEDMQKMEPLPLVKFIAKEVGKMHSMQLDID---RTPALWKKLNQFVQLAMEVRFEEAEKQNAIDRLNL 298
BLAST of mRNA_H-elongata_contig58530.13339.1 vs. uniprot
Match: A0A024GNQ4_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GNQ4_9STRA) HSP 1 Score: 114 bits (284), Expect = 9.300e-27 Identity = 58/141 (41.13%), Postives = 91/141 (64.54%), Query Frame = 1
Query: 4 GGLTNLLYKLQGPPAETPVLVRIYGQNTDVLIDRERDNRLFNELANMGYAPPYLGRFSNGRIEGYLTARALEPLDMSHRSPVDFVSLIAREMARFHRLPVTAVGPVKGAEIWQVLHKWLQLAKGLTFKDADKASAVAALDL 426
GG+TN LY+L + +LVRIYG+NT++LIDR+ +N +F +L+ G+AP Y GRF NGRIEG+L A LEP DM PV V +A+E+ + H + + + +W+ L++++QLA + F + +K +A+ L+L
Sbjct: 164 GGITNQLYRLIW--MDKSLLVRIYGENTEILIDRQTENEIFAKLSREGFAPTYYGRFKNGRIEGWLNADPLEPEDMQQIEPVPLVKYVAKEVGKMHSMQLDID---RTPVLWKKLNQFVQLAMEVHFSEPEKQNALNQLNL 299 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig58530.13339.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig58530.13339.1 >prot_H-elongata_contig58530.13339.1 ID=prot_H-elongata_contig58530.13339.1|Name=mRNA_H-elongata_contig58530.13339.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=150bp GGGLTNLLYKLQGPPAETPVLVRIYGQNTDVLIDRERDNRLFNELANMGYback to top mRNA from alignment at H-elongata_contig58530:99..1466+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig58530.13339.1 ID=mRNA_H-elongata_contig58530.13339.1|Name=mRNA_H-elongata_contig58530.13339.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1368bp|location=Sequence derived from alignment at H-elongata_contig58530:99..1466+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig58530:99..1466+ >mRNA_H-elongata_contig58530.13339.1 ID=mRNA_H-elongata_contig58530.13339.1|Name=mRNA_H-elongata_contig58530.13339.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=900bp|location=Sequence derived from alignment at H-elongata_contig58530:99..1466+ (Himanthalia elongata Himel1 dioecious)back to top |