mRNA_H-elongata_contig5852.13336.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig5852.13336.1 vs. uniprot
Match: A0A6H5JK84_9PHAE (FCP1 homology domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK84_9PHAE) HSP 1 Score: 85.5 bits (210), Expect = 7.020e-18 Identity = 36/67 (53.73%), Postives = 52/67 (77.61%), Query Frame = 1
Query: 1 QLVIWTASAKPYADTVINHIDPDGEYFSGRLYREVCVLYEGIYIKDLRRLGRQMESVVLLDDHMYSF 201
+LV+WTAS K YAD +I+ +DP G+ F+ R YR+ C+ + + +KDLRRLGR M +VVLLD+++YSF
Sbjct: 509 ELVVWTASGKSYADAIIDLLDPAGDIFAERFYRDSCLRHHNLCVKDLRRLGRPMNTVVLLDNYVYSF 575
BLAST of mRNA_H-elongata_contig5852.13336.1 vs. uniprot
Match: D8LDB9_ECTSI (FCP1 homology domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDB9_ECTSI) HSP 1 Score: 84.3 bits (207), Expect = 1.770e-17 Identity = 35/67 (52.24%), Postives = 52/67 (77.61%), Query Frame = 1
Query: 1 QLVIWTASAKPYADTVINHIDPDGEYFSGRLYREVCVLYEGIYIKDLRRLGRQMESVVLLDDHMYSF 201
+LV+WTAS + YAD +I+ +DP G+ F+ R YR+ C+ + + +KDLRRLGR M +VVLLD+++YSF
Sbjct: 466 ELVVWTASGRSYADAIIDLLDPAGDIFAERFYRDSCLRHHNLCVKDLRRLGRPMNTVVLLDNYVYSF 532
BLAST of mRNA_H-elongata_contig5852.13336.1 vs. uniprot
Match: A0A1R2BPH8_9CILI (FCP1 homology domain-containing protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2BPH8_9CILI) HSP 1 Score: 78.2 bits (191), Expect = 2.150e-15 Identity = 36/68 (52.94%), Postives = 53/68 (77.94%), Query Frame = 1
Query: 1 QLVIWTASAKPYADTVINHIDPDGEYFSGRLYREVCVLYEGIYIKDLRRL-GRQMESVVLLDDHMYSF 201
+++I+TAS K YAD V+NH+DP EY + RLYRE C+L EG++IKDLR L R++++ V++D+ YSF
Sbjct: 266 EVIIFTASHKYYADEVLNHLDPQNEYINYRLYRENCILAEGVHIKDLRILKDRKLKNTVIVDNCAYSF 333
BLAST of mRNA_H-elongata_contig5852.13336.1 vs. uniprot
Match: A0A7S3JSF4_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JSF4_9STRA) HSP 1 Score: 75.9 bits (185), Expect = 1.510e-14 Identity = 31/67 (46.27%), Postives = 48/67 (71.64%), Query Frame = 1
Query: 1 QLVIWTASAKPYADTVINHIDPDGEYFSGRLYREVCVLYEGIYIKDLRRLGRQMESVVLLDDHMYSF 201
++V++TAS K YA T+++HIDP+ +F RLYRE C +G+Y+KDL RLGR + ++D+ +Y F
Sbjct: 273 EIVVFTASHKAYAATLLDHIDPENIFFDHRLYREACSNVDGLYLKDLDRLGRDLSKTTIIDNTLYVF 339
BLAST of mRNA_H-elongata_contig5852.13336.1 vs. uniprot
Match: A0A1D3D792_9EIME (Dullard family phosphatase domain-containing protein n=1 Tax=Cyclospora cayetanensis TaxID=88456 RepID=A0A1D3D792_9EIME) HSP 1 Score: 74.3 bits (181), Expect = 5.950e-14 Identity = 33/67 (49.25%), Postives = 50/67 (74.63%), Query Frame = 1
Query: 1 QLVIWTASAKPYADTVINHIDPDGEYFSGRLYREVCVLYEGIYIKDLRRLGRQMESVVLLDDHMYSF 201
++V++TAS++ YAD +++ IDP S RLYR+ C G+YIKDLRRLGR+ +SV L+D+ ++SF
Sbjct: 846 EVVLFTASSQAYADKILDVIDPHKRLISYRLYRQHCSCISGVYIKDLRRLGREEQSVCLIDNSVFSF 912
BLAST of mRNA_H-elongata_contig5852.13336.1 vs. uniprot
Match: A0A7M7MBM9_VARDE (FCP1 homology domain-containing protein n=3 Tax=Varroa TaxID=62624 RepID=A0A7M7MBM9_VARDE) HSP 1 Score: 72.4 bits (176), Expect = 8.270e-14 Identity = 29/62 (46.77%), Postives = 47/62 (75.81%), Query Frame = 1
Query: 1 QLVIWTASAKPYADTVINHIDPDGEYFSGRLYREVCVLYEGIYIKDLRRLGRQMESVVLLDD 186
++V++TAS YAD +++ +DP+GE F RLYR+ C ++G+++KDL RLGR M V+L+D+
Sbjct: 107 EVVVFTASLPFYADEILDDLDPNGEIFHHRLYRQHCSYFQGVFVKDLERLGRPMNQVILVDN 168
BLAST of mRNA_H-elongata_contig5852.13336.1 vs. uniprot
Match: A0A7M7MHV8_VARDE (FCP1 homology domain-containing protein n=1 Tax=Varroa destructor TaxID=109461 RepID=A0A7M7MHV8_VARDE) HSP 1 Score: 72.4 bits (176), Expect = 1.270e-13 Identity = 29/62 (46.77%), Postives = 47/62 (75.81%), Query Frame = 1
Query: 1 QLVIWTASAKPYADTVINHIDPDGEYFSGRLYREVCVLYEGIYIKDLRRLGRQMESVVLLDD 186
++V++TAS YAD +++ +DP+GE F RLYR+ C ++G+++KDL RLGR M V+L+D+
Sbjct: 143 EVVVFTASLPFYADEILDDLDPNGEIFHHRLYRQHCSYFQGVFVKDLERLGRPMNQVILVDN 204
BLAST of mRNA_H-elongata_contig5852.13336.1 vs. uniprot
Match: A0A507FKH1_9FUNG (FCP1 homology domain-containing protein n=1 Tax=Chytriomyces confervae TaxID=246404 RepID=A0A507FKH1_9FUNG) HSP 1 Score: 72.0 bits (175), Expect = 2.720e-13 Identity = 35/67 (52.24%), Postives = 48/67 (71.64%), Query Frame = 1
Query: 1 QLVIWTASAKPYADTVINHIDPDGEYFSGRLYREVCVLYEGIYIKDLRRLGRQMESVVLLDDHMYSF 201
++V++TAS YA+ V+N IDP G RLYRE C L+ G +IKDL +LGRQMES++LLD+ S+
Sbjct: 212 EIVVFTASVPEYANAVLNRIDP-GRRIRHRLYREHCKLFHGGWIKDLSKLGRQMESIILLDNCAVSY 277
BLAST of mRNA_H-elongata_contig5852.13336.1 vs. uniprot
Match: A0A7S3DK09_9EUKA (Hypothetical protein n=4 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3DK09_9EUKA) HSP 1 Score: 72.4 bits (176), Expect = 2.790e-13 Identity = 32/67 (47.76%), Postives = 47/67 (70.15%), Query Frame = 1
Query: 1 QLVIWTASAKPYADTVINHIDPDGEYFSGRLYREVCVLYEGIYIKDLRRLGRQMESVVLLDDHMYSF 201
++VI+TAS K YAD VI+ + PDG RLYRE C +EG+Y+KDL RLGR + +++D+ +S+
Sbjct: 419 EVVIFTASLKHYADLVIDGLLPDGVEVHSRLYRESCTFHEGVYVKDLARLGRDVNRSIIVDNSPFSY 485
BLAST of mRNA_H-elongata_contig5852.13336.1 vs. uniprot
Match: A0A1V9XHR7_9ACAR (CTD small phosphatase protein 2-like n=1 Tax=Tropilaelaps mercedesae TaxID=418985 RepID=A0A1V9XHR7_9ACAR) HSP 1 Score: 71.2 bits (173), Expect = 3.180e-13 Identity = 30/62 (48.39%), Postives = 46/62 (74.19%), Query Frame = 1
Query: 1 QLVIWTASAKPYADTVINHIDPDGEYFSGRLYREVCVLYEGIYIKDLRRLGRQMESVVLLDD 186
++V++TAS YAD +++ +DP GE F RLYR+ C ++G++IKDL RLGR M V+L+D+
Sbjct: 120 EIVVFTASLPFYADGILDDLDPKGEIFHHRLYRQHCCYFQGVFIKDLERLGRPMGRVILVDN 181 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5852.13336.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig5852.13336.1 >prot_H-elongata_contig5852.13336.1 ID=prot_H-elongata_contig5852.13336.1|Name=mRNA_H-elongata_contig5852.13336.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=67bp QLVIWTASAKPYADTVINHIDPDGEYFSGRLYREVCVLYEGIYIKDLRRLback to top mRNA from alignment at H-elongata_contig5852:7937..8137+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig5852.13336.1 ID=mRNA_H-elongata_contig5852.13336.1|Name=mRNA_H-elongata_contig5852.13336.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=201bp|location=Sequence derived from alignment at H-elongata_contig5852:7937..8137+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig5852:7937..8137+ >mRNA_H-elongata_contig5852.13336.1 ID=mRNA_H-elongata_contig5852.13336.1|Name=mRNA_H-elongata_contig5852.13336.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=402bp|location=Sequence derived from alignment at H-elongata_contig5852:7937..8137+ (Himanthalia elongata Himel1 dioecious)back to top |