mRNA_H-elongata_contig58460.13331.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig58460.13331.1 vs. uniprot
Match: D7FTR2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTR2_ECTSI) HSP 1 Score: 221 bits (563), Expect = 2.350e-67 Identity = 106/170 (62.35%), Postives = 135/170 (79.41%), Query Frame = 1
Query: 10 GGGNQKVMPESLDIVRRLDQDPAYGPPVLAPASGRKDINDWIASIVIAQRRLLCPRLATTPLPEFQTRSAREAYIRRHPLSDPSSYDENLKNSPNLIEEMEQALWKLVPMIGSDASVNADGKLSYDDIILWPRLRALTIVRDLGIPPKIRAYLDYLSERCDIPLHDKLSS 519
G + ++M ES+DIV+RLD DP +GPPVLAPA RKD++ W++S + RRL+ PR A TPL EFQTRSAREA++R HPL +PSSY+ NLK SP LIEE+E+ LWKL MI S SV ADGKLSY+D+ +PR+R LTIV+ LGIPPK+RAYLD +SER D+PL+DK++S
Sbjct: 74 GSEDHEIMAESMDIVKRLDLDPQFGPPVLAPAVDRKDLDGWVSSAAMLMRRLVRPRNAVTPLAEFQTRSAREAFVRNHPLPEPSSYEANLKASPKLIEELERELWKLEGMIHSPTSVAADGKLSYNDVEFFPRMRGLTIVQGLGIPPKLRAYLDAVSERVDVPLYDKIAS 243
BLAST of mRNA_H-elongata_contig58460.13331.1 vs. uniprot
Match: A0A6H5J619_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J619_9PHAE) HSP 1 Score: 221 bits (563), Expect = 2.090e-66 Identity = 107/170 (62.94%), Postives = 135/170 (79.41%), Query Frame = 1
Query: 10 GGGNQKVMPESLDIVRRLDQDPAYGPPVLAPASGRKDINDWIASIVIAQRRLLCPRLATTPLPEFQTRSAREAYIRRHPLSDPSSYDENLKNSPNLIEEMEQALWKLVPMIGSDASVNADGKLSYDDIILWPRLRALTIVRDLGIPPKIRAYLDYLSERCDIPLHDKLSS 519
G + ++M ES+DIV+RLD DP +GPPVLAPA RKD++ W++S + RRL+ PR A TPL EFQTRSAREA++R HPL +PSSY+ NLK SP LIEE+E+ LWKL MI S SV ADGKLSY+DI +PR+R LTIV+ LGIPPK+RAYLD +SER D+PL+DK++S
Sbjct: 145 GSDDHEIMAESMDIVKRLDLDPQFGPPVLAPAVDRKDLDSWVSSAGMLMRRLVRPRNAVTPLAEFQTRSAREAFVRNHPLPEPSSYEANLKASPKLIEELERELWKLEGMIHSPTSVAADGKLSYNDIEFFPRMRGLTIVQGLGIPPKLRAYLDAVSERVDVPLYDKIAS 314
BLAST of mRNA_H-elongata_contig58460.13331.1 vs. uniprot
Match: A0A6V1VKR3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1VKR3_HETAK) HSP 1 Score: 155 bits (392), Expect = 5.010e-41 Identity = 80/165 (48.48%), Postives = 108/165 (65.45%), Query Frame = 1
Query: 25 KVMPESLDIVRRLDQDPAYGPPVLAPASGRKDINDWIASIVIAQRRLLCPRLATTPL-PEFQTRSAREAYIRRHPLSDPSSYDENLKNSPNLIEEMEQALWKLVPMIGSDASVNADGKLSYDDIILWPRLRALTIVRDLGIPPKIRAYLDYLSERCDIPLHDKLS 516
+VM ESLDI+ RLD DP +GPP+L PAS R D +WI + RL+ PR A +PL PEF + ARE Y++RHPL PS YD SP +EEM + L +L PMI S A G LS DD+ L+ RLR LT+VR L PPK++AY++ +S++ +PL+ +L+
Sbjct: 148 EVMAESLDIIARLDSDPKWGPPLLRPASDRTDFRNWINDNKVLYNRLVNPRYARSPLIPEFTFQEAREVYVKRHPLPAPSDYDVLFAMSPQFVEEMNEKLLELEPMIFSAEHCTAGG-LSVDDVELFSRLRGLTVVRGLSFPPKVKAYIETMSQKTKVPLYYQLA 311
BLAST of mRNA_H-elongata_contig58460.13331.1 vs. uniprot
Match: A0A7S2XXQ8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXQ8_9STRA) HSP 1 Score: 140 bits (353), Expect = 1.320e-35 Identity = 77/157 (49.04%), Postives = 104/157 (66.24%), Query Frame = 1
Query: 16 GNQKVMPESLDIVRRLDQDPAYGPPVL-APASGRKDINDWIASIVIAQRRLLCPRLATTPLPEFQTRSAREAYIRRHPLSDPSSYDENLKNSPNLIEEMEQALWKLVPMIGSDASVNADGKLSYDDIILWPRLRALTIVRDLGIPPKIRAYLDYLSE 483
G +VMPES+DIV R+D DP YG P+L R+D+ W+ RR L R PLPEFQ RSARE +I+RHPL++PS Y+EN NS L+EEM Q L +L MI S DG LSYDDI ++ +LR++T++R + IPPK++AY++ +SE
Sbjct: 131 GKDEVMPESMDIVWRIDNDPKYGQPLLKGKPELREDLAQWMKDTRDLFRRALHTRHVMVPLPEFQFRSAREVFIQRHPLAEPSDYNENYYNSA-LVEEMNQKLLELDAMIFSPECCT-DGGLSYDDIAVFGKLRSVTLIRGIKIPPKMKAYIESMSE 285
BLAST of mRNA_H-elongata_contig58460.13331.1 vs. uniprot
Match: A0A2V3IFN8_9FLOR (Glutaredoxin 2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFN8_9FLOR) HSP 1 Score: 137 bits (345), Expect = 5.910e-35 Identity = 70/161 (43.48%), Postives = 101/161 (62.73%), Query Frame = 1
Query: 28 VMPESLDIVRRLDQDPAYGPP-VLAPASGRKDINDWIASIVIAQRRLLCPRLATTPLPEFQTRSAREAYIRRHPLSDPSSYDENLKNSPNLIEEMEQALWKLVPMIGSDASVNADGKLSYDDIILWPRLRALTIVRDLGIPPKIRAYLDYLSERCDIPLHD 507
PESLDI + +D DP +G P +L A+ R DI W+ + + RRL R + PLPEF + ARE YIR HPLSDP Y++N S I ++++ L +L MI S + G LSYDDI+L+PRLR LTIV+ L +P ++R Y+++ + +IP++D
Sbjct: 75 AQPESLDICKHVDNDPRFGAPGLLKSATPRDDIAKWMDELAMPMRRLSRVRFSRAPLPEFVFQEARETYIRNHPLSDPGDYEDNFDRSTEYITQVQERLDELAEMIYSPEHCSPHG-LSYDDIVLFPRLRTLTIVKGLVLPKRLREYVEFQAAAAEIPVYD 234
BLAST of mRNA_H-elongata_contig58460.13331.1 vs. uniprot
Match: A0A0G4EFM6_VITBC (GST N-terminal domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EFM6_VITBC) HSP 1 Score: 140 bits (352), Expect = 6.110e-35 Identity = 76/171 (44.44%), Postives = 108/171 (63.16%), Query Frame = 1
Query: 16 GNQKVMPESLDIVRRLDQDPAYGP--PVLAPASGRKDINDWIASIVIAQRRLLCPRLA-TTPLPEFQTRSAREAYIRRHPLSDPSSYDENLKNSPNLIEEMEQALWKLVPMIGS-DASVNADGKLSYDDIILWPRLRALTIVRDLGIPPKIRAYLDYLSERCDIPLHDKLS 516
G +MPESLDIV+ +D+ G P+L P SGR D+ +W+ SI RRL PR A + LPEF SAR YI RHPL +PSSY+EN + S I + + L KL MI + ++G +SYDDI ++PRLR L+IV+ L PP ++AY++ LS++ D+ L+ K++
Sbjct: 166 GEGLIMPESLDIVKYIDESEEIGAGLPLLKPFSGRSDLKEWLDSIAEPSRRLSRPRFAWSANLPEFAFDSARRTYIARHPLENPSSYEENYERSAEWIAALSEGLKKLDGMIANPQEGYISEGGISYDDIDMFPRLRNLSIVKGLEFPPNVKAYIEVLSKKTDVALYTKMA 336
BLAST of mRNA_H-elongata_contig58460.13331.1 vs. uniprot
Match: A0A5J4YKV5_PORPP (Glutaredoxin 2 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YKV5_PORPP) HSP 1 Score: 132 bits (331), Expect = 8.330e-33 Identity = 65/159 (40.88%), Postives = 101/159 (63.52%), Query Frame = 1
Query: 25 KVMPESLDIVRRLDQDPAYGPP-VLAPASGRKDINDWIASIVIAQRRLLCPRLATTPLPEFQTRSAREAYIRRHPLSDPSSYDENLKNSPNLIEEMEQALWKLVPMIGSDASVNADGKLSYDDIILWPRLRALTIVRDLGIPPKIRAYLDYLSERCDIP 498
++M ESLDI++R+D+DPA+GP ++ PA+GR+DI+ WI RRL+ PR PLPEF AR AYIR H + +P YD N S L+ +M + KL ++ + + +G +S DD++L+ RLR+L +++ PPK++AY+D+ + DIP
Sbjct: 83 ELMNESLDIIKRIDEDPAFGPTNLIKPATGRQDIDAWIKESKELNRRLISPRYVRVPLPEFFFAEARAAYIRNHAIPEPGDYDTNFAMSAELLPQMNALMAKLDALVFCEQHCS-EGGVSMDDLVLFSRLRSLELLKGAVWPPKVKAYMDHFHQLTDIP 240
BLAST of mRNA_H-elongata_contig58460.13331.1 vs. uniprot
Match: A0A0G4H2N0_9ALVE (Uncharacterized protein n=2 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4H2N0_9ALVE) HSP 1 Score: 132 bits (332), Expect = 1.510e-32 Identity = 76/170 (44.71%), Postives = 104/170 (61.18%), Query Frame = 1
Query: 22 QKV--MPESLDIVRRLDQDPAYGP--PVLAPASGRKDINDWIASIVIAQRRLLCPRLATTPL-PEFQTRSAREAYIRRHPLSDPSSYDENLKNSPNLIEEMEQALWKLVPMIGSDASVNADGKLSYDDIILWPRLRALTIVRDLGIPPKIRAYLDYLSERCDIPLHDKLS 516
QK+ MPES+DIVRR+D D G PVL ++ + + A RRL PR A + L PEF +AR Y RHPL PSSYDEN K S I ++E+AL KL P++ S+ +G SY D+ L+PRLR TIV+ + P ++RAY+D SE+ DIPL+D+++
Sbjct: 116 QKITAMPESMDIVRRVDGDAKMGAGGPVLKETGASEEFISAMNEVTAASRRLTRPRFAGSALLPEFSFDAARRTYTERHPLDAPSSYDENFKRSSEYIPQLEKALQKLDPLLHSEEEA-VEGGPSYTDVDLFPRLRGCTIVKGVKWPQRVRAYVDKWSEKTDIPLYDRIA 284
BLAST of mRNA_H-elongata_contig58460.13331.1 vs. uniprot
Match: W7TQ45_9STRA (Glutaredoxin 2 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQ45_9STRA) HSP 1 Score: 132 bits (331), Expect = 1.750e-32 Identity = 72/165 (43.64%), Postives = 108/165 (65.45%), Query Frame = 1
Query: 16 GNQKVMPESLDIVRRLDQDPAYGPPVLAPASGRKDINDWIASIVIAQRRLLCPRLA-TTPLPEFQTRSAREAYIRRHPL-SDPSSYDENLKNSPNLIEEMEQALWKLVPMIGSDASVNADGKLSYDDIILWPRLRALTIVRDLGIPPKIRAYLDYLSERCDIPLH 504
G + VMPES+DIV+ +D+DP +GPPVL S R+DI + SI RR PR A ++ LPEF T +AR A++R HP S P Y ENL+N +L+ ++ L +L M+ SD V +G +SYDD+ L+ ++R LT+V L +PP+++AY++ E+ +IPL+
Sbjct: 110 GERVVMPESMDIVKLIDEDPRWGPPVLRRGSDREDIKAFFDSIADLSRRCTRPRFALSSVLPEFHTPAARAAFVRNHPFKSPPFDYTENLQNK-SLVADLSARLRELDAMLFSDECVT-EGGVSYDDVDLFGKVRGLTVVAGLVLPPRLKAYVEAFGEKTEIPLY 272
BLAST of mRNA_H-elongata_contig58460.13331.1 vs. uniprot
Match: A0A2V3IZ39_9FLOR (Glutaredoxin 2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZ39_9FLOR) HSP 1 Score: 131 bits (329), Expect = 2.100e-32 Identity = 71/166 (42.77%), Postives = 98/166 (59.04%), Query Frame = 1
Query: 13 GGNQKVMPESLDIVRRLDQDPAYGPPVLA-PASGRKDINDWIASIVIAQRRLLCPRLATTPLPEFQTRSAREAYIRRHPLSDPSSYDENLKNSPNLIEEMEQALWKLVPMIGSDASVNADGKLSYDDIILWPRLRALTIVRDLGIPPKIRAYLDYLSERCDIPLHD 507
G N PESLDI +++D D +G P L P+ R+ I WI RL PR A PL EF R +RE + R +PLSDP YDEN + S I++++ L +L +I S + G LSY+DIIL+PRLR LTIV+ + P +IR Y+D+ + +IPL+D
Sbjct: 89 GANGPAYPESLDICQKIDNDSRFGTPALLNPSPPREGIVKWIEDTFEPMGRLSRPRFARAPLAEFVFRDSRETFARNYPLSDPDGYDENFRRSSAYIKKVQDRLERLAQLIHSPQHCSPHG-LSYEDIILFPRLRTLTIVKGIHFPKRIREYIDFQAAVAEIPLYD 253 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig58460.13331.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig58460.13331.1 >prot_H-elongata_contig58460.13331.1 ID=prot_H-elongata_contig58460.13331.1|Name=mRNA_H-elongata_contig58460.13331.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=164bp MPESLDIVRRLDQDPAYGPPVLAPASGRKDINDWIASIVIAQRRLLCPRLback to top mRNA from alignment at H-elongata_contig58460:204..2509+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig58460.13331.1 ID=mRNA_H-elongata_contig58460.13331.1|Name=mRNA_H-elongata_contig58460.13331.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2306bp|location=Sequence derived from alignment at H-elongata_contig58460:204..2509+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig58460:204..2509+ >mRNA_H-elongata_contig58460.13331.1 ID=mRNA_H-elongata_contig58460.13331.1|Name=mRNA_H-elongata_contig58460.13331.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=984bp|location=Sequence derived from alignment at H-elongata_contig58460:204..2509+ (Himanthalia elongata Himel1 dioecious)back to top |