mRNA_H-elongata_contig584.13325.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig584.13325.1 vs. uniprot
Match: D7FY89_ECTSI (Novel protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY89_ECTSI) HSP 1 Score: 741 bits (1914), Expect = 3.980e-258 Identity = 381/586 (65.02%), Postives = 466/586 (79.52%), Query Frame = 1
Query: 16 IVMIIFVQCILGRCLSGPVLRRTWLGLGGVVCVLAAGLAAFGLNSGFGVPFTSLVQILPFILIGIGVDDMFVIVAAFDQTDPALPIEERVALGLKRCGVSVTYTSLTNFAAFMLGSTTSLPAVEYFCLYAGTAILLNFFLQISAFVALLTMDVNRQNAGKFDWCCCFSSKKFLEQSAKQ------RDITTIATSTXXXXXXXXXXXXXSDV-RIGRIGMFMKEKYTPFLLSAKGKTRVLLGTTGLLAAGIYGVTQATQGFDVINLAPDDHFAREYIEASRDYMLEFNSHFVPLNIYTRDVDYTKVIVQASIQATDELMLEQPYVEGPLQSWLVSFVAWASNKTEYSANIGKSGGYPVYKDPDTFYIALVDFLNDESNARFESDIVYDDAGLIKISRSEFFLSDITDTNKQVDSLLDARNVVDQSNLEPEQFAFSEVFILIEQFLVIYNELILNFSMALLAVVVMSLIVLGKISITALVCFTVVVIDVELLGFIYHYGLEINSTTVIQLIMAVGLVVDYMVHIVHYFLHQDPSIPKDARIASALGEIGPSIMVGAATTFLGIIPLAFASNFIFRVFFKMFILIIGFG 1752
++M+ FV +GRC +GPV +R+WLG+GGV+ V+AAG+AA+GLNSGF +PFTSL QILPFIL+GIGVDDMFVIVAA+D TDP+L +EERVALG+KRCGVSVTYTSLTNF AF+LGS TSLPAVEYFCLYA TAIL +FFLQ++AFVALLTMD NRQ AGK DWCCCF+SKK+L++ +Q R +T A++ ++V ++ IG FMK+KY+P LLSAKGK VLLG+ LLAAGIYGVTQATQGFDV++LAPD H++ Y + +R Y + ++P+N+YT+DVDY V VQA +Q+ D M+E V+GPL SWL SF+ WA T YSAN+G SGGYPVY D DTFY AL FL DE NARF D+V+DD GLIKISRS+ +L ++ DT VD+L D R V DQS L+P+ FA+S VF+ EQF+VIYNEL+ +F +ALLAV+ +SL VLGK++I LVC T+VVIDVELLGF+YH+ L++NS TVI+LIMAVGLVVDYMVHIVHYFLHQDP IPKDARIA ALGEIGPS+MVGAATTFLGI+PLAFA+N IFRVFFKMF++II FG
Sbjct: 296 VLMVAFVSVAIGRCCTGPVKQRSWLGIGGVMLVIAAGMAAYGLNSGFDIPFTSLSQILPFILVGIGVDDMFVIVAAYDHTDPSLAVEERVALGVKRCGVSVTYTSLTNFFAFLLGSLTSLPAVEYFCLYAATAILFDFFLQMTAFVALLTMDANRQKAGKIDWCCCFTSKKYLQEQERQHQDGIQRGVTLPASNGEGANIGQRDLNLKAEVHQLSPIGRFMKDKYSPSLLSAKGKIVVLLGSAALLAAGIYGVTQATQGFDVLDLAPDGHYSIAYTDRARLYDFDIQEWYLPMNVYTQDVDYPDVTVQAEMQSVDAEMIETKNVDGPLDSWLASFIVWAEANTTYSANVGTSGGYPVYDDRDTFYTALSAFLADEDNARFVPDVVFDDEGLIKISRSDMYLVNLVDTENNVDALRDTREVADQSTLDPQPFAYSGVFVFSEQFVVIYNELLSSFGLALLAVLALSLFVLGKVTIVLLVCLTLVVIDVELLGFVYHWNLDVNSITVIELIMAVGLVVDYMVHIVHYFLHQDPRIPKDARIAEALGEIGPSVMVGAATTFLGIMPLAFANNVIFRVFFKMFLVIISFG 881
BLAST of mRNA_H-elongata_contig584.13325.1 vs. uniprot
Match: D7FY95_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY95_ECTSI) HSP 1 Score: 732 bits (1890), Expect = 4.300e-254 Identity = 384/591 (64.97%), Postives = 466/591 (78.85%), Query Frame = 1
Query: 1 SFRPDIVMIIFVQCILGRCLSGPVLRRTWLGLGGVVCVLAAGLAAFGLNSGFGVPFTSLVQILPFILIGIGVDDMFVIVAAFDQTDPALPIEERVALGLKRCGVSVTYTSLTNFAAFMLGSTTSLPAVEYFCLYAGTAILLNFFLQISAFVALLTMDVNRQNAGKFDWCCCFSSKKFLEQSAKQ------RDITTIATSTXXXXXXXXXXXXXSDV-RIGRIGMFMKEKYTPFLLSAKGKTRVLLGTTGLLAAGIYGVTQATQGFDVINLAPDDHFAREYIEASRDYMLEFNSHFVPLNIYTRDVDYTKVIVQASIQATDELMLEQPYVEGPLQSWLVSFVAWASNKTEYSANIGKSGGYPVYKDPDTFYIALVDFLNDESNARFESDIVYDDAGLIKISRSEFFLSDITDTNKQVDSLLDARNVVDQSNLEPEQFAFSEVFILIEQFLVIYNELILNFSMALLAVVVMSLIVLGKISITALVCFTVVVIDVELLGFIYHYGLEINSTTVIQLIMAVGLVVDYMVHIVHYFLHQDPSIPKDARIASALGEIGPSIMVGAATTFLGIIPLAFASNFIFRVFFKMFILIIGFG 1752
+ R ++MI V LGRC SGPV RR+WLG+GG V V AAGLAA+GLNSGF +PFTSL QILPFILIGIGVDDMFVIVAA+D TDP+L +EER+ALG+KRCGVSVTYTSLTNF AF+LGS TSLPAVEYFCLYA TAIL +FFLQ++AFVALLTMD NRQ AGK D C +SKK+L++ +Q R +T ++ ++V +I +G FMK+K +PF+LSAKGK VLLG+ GLLAAGIYGVTQATQGFDV++LAPD H++ EY E SR Y + +VP+++YT++VDY V VQA +Q+ DE MLE V PL SWLVSF+ WA T YSANIG SGGYPVY D DTFY AL FL DE NARF +D+V+DD G+IKISRSE +L ++ DT+K VD L D R V DQS L+P+ FA+S VF+ EQ++VIYNEL+ +F +ALLAV+V+SL VLGK+++ LVC T+++IDVELLGF+YH+ L++NS TVI+LIMAVGLVV+YMVHIVHYFLHQDPSIPKDARIA ALGEIGPS+MVGAATTFLGI+PLAFA+N IFRVFFKMF++II FG
Sbjct: 319 ALRAYVLMIAVVSVALGRCCSGPVKRRSWLGVGGTVLVAAAGLAAYGLNSGFHIPFTSLSQILPFILIGIGVDDMFVIVAAYDHTDPSLAVEERIALGVKRCGVSVTYTSLTNFFAFLLGSMTSLPAVEYFCLYAATAILFDFFLQMTAFVALLTMDANRQKAGKIDCCXXLTSKKYLQEQERQHQEGIQRGVTLPNSNGESAFNAQGKHDLKAEVHQISPMGRFMKDKCSPFVLSAKGKALVLLGSAGLLAAGIYGVTQATQGFDVLDLAPDGHYSIEYTERSRKYDFDIQEWYVPMDVYTQEVDYPDVAVQAEMQSVDEEMLELKNVAAPLDSWLVSFIVWAEVNTTYSANIGTSGGYPVYDDRDTFYTALSAFLADEDNARFLADVVFDDEGIIKISRSEMYLINLVDTDKNVDVLRDTREVADQSTLDPQPFAYSAVFLFSEQYVVIYNELLSSFGLALLAVLVLSLFVLGKVTVVLLVCVTLIIIDVELLGFVYHWNLDVNSITVIELIMAVGLVVEYMVHIVHYFLHQDPSIPKDARIAEALGEIGPSVMVGAATTFLGIMPLAFANNVIFRVFFKMFLVIISFG 909
BLAST of mRNA_H-elongata_contig584.13325.1 vs. uniprot
Match: D8LCK4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCK4_ECTSI) HSP 1 Score: 699 bits (1805), Expect = 3.540e-243 Identity = 365/600 (60.83%), Postives = 452/600 (75.33%), Query Frame = 1
Query: 4 FRPDIVMIIFVQCILGRCLSGPVLRRTWLGLGGVVCVLAAGLAAFGLNSGFGVPFTSLVQILPFILIGIGVDDMFVIVAAFDQTDPALPIEERVALGLKRCGVSVTYTSLTNFAAFMLGSTTSLPAVEYFCLYAGTAILLNFFLQISAFVALLTMDVNRQNAGKFDWCCCFSSKKFLEQSAKQ---------------RDITTIATS--TXXXXXXXXXXXXXSDVRIGRIGMFMKEKYTPFLLSAKGKTRVLLGTTGLLAAGIYGVTQATQGFDVINLAPDDHFAREYIEASRDYMLEFNSHFVPLNIYTRDVDYTKVIVQASIQATDELMLEQPYVEGPLQSWLVSFVAWASNKTEYSANIGKSGGYPVYKDPDTFYIALVDFLNDESNARFESDIVYDDAGLIKISRSEFFLSDITDTNKQVDSLLDARNVVDQSNLEPEQFAFSEVFILIEQFLVIYNELILNFSMALLAVVVMSLIVLGKISITALVCFTVVVIDVELLGFIYHYGLEINSTTVIQLIMAVGLVVDYMVHIVHYFLHQDPSIPKDARIASALGEIGPSIMVGAATTFLGIIPLAFASNFIFRVFFKMFILIIGFG 1752
F ++M++FV LGRC +GPV RR+WLG+GG++ V+AAGLAA+GLNSGFGVPFTSL QILPFILIGIGVDDMFVIVAA+D TD ALP+EERVALG+KRCG+SVTYTSLTNF AF+LG+ +SLPAV+YFCLYA TAIL +FFLQ++AFVALLTMD NRQ AGK D CCCF+S K E+ + RDITT T + + G F+KE ++P +LS+ GK VLL + LL +GIYGVTQATQGFDV++LAPDDH+AR+Y +R Y ++ +VP+ +YTR+VDY V VQA +Q+TD+L+LE +VEGP+ SWL SF+ WA + YSAN+G SGGY VY+D TFY AL F D +NARF D+V++D G IKISRS+ FL +TDT K VD+L R VVDQS L+P FA+SEVF+ EQF+VIY EL+ +F +AL AV +SL+VLGK+++ LVC T+V++D ELLGF+Y YGL++NS TVIQLIMAVGLVVDYMVH+VHYFLHQDP PKD RIA ALGEIGPS+++GA TTFLGI+PL FA N IFRVFFKMF++II FG
Sbjct: 172 FATYVIMVLFVTVSLGRCCAGPVERRSWLGVGGIMLVVAAGLAAYGLNSGFGVPFTSLSQILPFILIGIGVDDMFVIVAAYDHTDRALPVEERVALGVKRCGLSVTYTSLTNFFAFLLGAQSSLPAVQYFCLYAATAILFDFFLQMTAFVALLTMDANRQKAGKIDCCCCFTSPKHPEKQQRSQKESIQRGVNPRSTHRDITTDGGGGGTDGLQTRGKDDFKAEVYELSKFGRFVKETFSPCILSSTGKAVVLLCSAWLLTSGIYGVTQATQGFDVLDLAPDDHYARDYTAMARSYNMDILEWYVPMRVYTREVDYPDVAVQAEMQSTDDLLLENEFVEGPVDSWLTSFIEWAESSDTYSANVGTSGGYVVYEDRATFYTALSAFTEDGANARFLGDVVFNDDGTIKISRSDMFLVGLTDTEKNVDALRGTREVVDQSALDPAPFAYSEVFVSSEQFVVIYGELMSSFGLALAAVFALSLLVLGKVAVVVLVCVTLVIVDAELLGFVYLYGLDVNSITVIQLIMAVGLVVDYMVHLVHYFLHQDPRTPKDTRIADALGEIGPSLLMGAGTTFLGIMPLVFAHNVIFRVFFKMFLVIISFG 771
BLAST of mRNA_H-elongata_contig584.13325.1 vs. uniprot
Match: D7FY98_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY98_ECTSI) HSP 1 Score: 683 bits (1762), Expect = 3.540e-236 Identity = 359/586 (61.26%), Postives = 432/586 (73.72%), Query Frame = 1
Query: 16 IVMIIFVQCILGRCLSGPVLRRTWLGLGGVVCVLAAGLAAFGLNSGFGVPFTSLVQILPFILIGIGVDDMFVIVAAFDQTDPALPIEERVALGLKRCGVSVTYTSLTNFAAFMLGSTTSLPAVEYFCLYAGTAILLNFFLQISAFVALLTMDVNRQNAGKFDWCCCFSSKKFLEQSAKQ------RDITTIATSTXXXXXXXXXXXXXSDV-RIGRIGMFMKEKYTPFLLSAKGKTRVLLGTTGLLAAGIYGVTQATQGFDVINLAPDDHFAREYIEASRDYMLEFNSHFVPLNIYTRDVDYTKVIVQASIQATDELMLEQPYVEGPLQSWLVSFVAWASNKTEYSANIGKSGGYPVYKDPDTFYIALVDFLNDESNARFESDIVYDDAGLIKISRSEFFLSDITDTNKQVDSLLDARNVVDQSNLEPEQFAFSEVFILIEQFLVIYNELILNFSMALLAVVVMSLIVLGKISITALVCFTVVVIDVELLGFIYHYGLEINSTTVIQLIMAVGLVVDYMVHIVHYFLHQDPSIPKDARIASALGEIGPSIMVGAATTFLGIIPLAFASNFIFRVFFKMFILIIGFG 1752
I+M+ FV +GRC SGPV RR+WLG+GGV+ V+AAGLAA+G+NSGF +PFT L +ILPFILIGIGVDDMFVIVAA+D TDP+L +EER+ALG+KRCGVSVTYTSLTNF AFMLGS +SLPAVEYFCLYAGTAIL +FFLQ++AFVALLTMD NRQ AGK D CCCF+SKK+L + +Q R +T A+ ++V +I IG FMKEKY+PF+LSAKGK VLLG+ GLLAAGIYGVTQATQGFD ++LAPD H++ EY E +R Y + +VP+N+YT++VDY V VQA IQ+ DE M+E V+GPL SWL SF+ WA T YSAN+G SGGYPVY D DTFY AL FL DE NARF +D+++DD GLIKISRSE +L ++ DT+ +VD+L D R V DQS L+P+ FA+S+ +IDVELLGF+YH+ L++NS TVI+LIMAVGLVVDYMVHIVHYFLHQDPSIPKDARIA ALGEIGPS+MVGAATTFLGI+PLAFA+N IFRVFFKMF++II FG
Sbjct: 273 ILMVAFVSVAIGRCCSGPVKRRSWLGVGGVMLVVAAGLAAYGINSGFDIPFTPLSRILPFILIGIGVDDMFVIVAAYDHTDPSLAVEERIALGVKRCGVSVTYTSLTNFFAFMLGSMSSLPAVEYFCLYAGTAILFDFFLQMTAFVALLTMDANRQKAGKIDSCCCFTSKKYLREQERQHQEGVPRGVTLPASIGERVDMSRRALDRKAEVHQISSIGRFMKEKYSPFVLSAKGKALVLLGSAGLLAAGIYGVTQATQGFDALDLAPDGHYSIEYTEKARSYDFDIQEWYVPINVYTQEVDYPDVTVQAEIQSVDEEMIEAKNVDGPLDSWLASFIEWAEANTTYSANVGTSGGYPVYDDRDTFYTALSAFLADEDNARFLTDVIFDDDGLIKISRSEMYLINLVDTDNKVDALEDTREVADQSTLDPQPFAYSDA-----------------------------------------------IIDVELLGFVYHWNLDVNSITVIELIMAVGLVVDYMVHIVHYFLHQDPSIPKDARIAEALGEIGPSVMVGAATTFLGIMPLAFANNVIFRVFFKMFLVIISFG 811
BLAST of mRNA_H-elongata_contig584.13325.1 vs. uniprot
Match: D7FY88_ECTSI (SSD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY88_ECTSI) HSP 1 Score: 642 bits (1656), Expect = 2.390e-220 Identity = 345/588 (58.67%), Postives = 425/588 (72.28%), Query Frame = 1
Query: 13 DIVMIIFVQCILGRCLSGPVLRRTWLGLGGVVCVLAAGLAAFGLNSGFGVPFTSLVQILPFILIGIGVDDMFVIVAAFDQTDPALPIEERVALGLKRCGVSVTYTSLTNFAAFMLGSTTSLPAVEYFCLYAGTAILLNFFLQISAFVALLTMDVNRQNAGKFDWCCCFSSKKFLEQSAKQ------RDITTIATSTXXXXXXXXXXXXXSDVR-IGRIGMFMKEKYTPFLLSAKGKTRVLLGTTGLLAAGIYGVTQATQGFDVINLAPDDHFAREYIEASRDYMLEFNSHFVPLNIYTRDVDYTKVIVQASIQATDELMLEQPYVEGPLQSWLVSFVAWASNKTEYSANIGKSGGYPVYKDPDTFYIALVDFLNDESNARFESDIVYDDAGLIKISRSEFFLSDITDTNKQVDSLLDARNVVDQSNLEPEQFAFSEVFILIEQFLVIYNELILNFSMALLAVVVMSLIVLGKISITALVCFTVVVIDVELLGFIYHYGLEINSTTVIQLIMAVGLVVDYMVHIVHYFLHQDPSIPKDARIASALGEIGPSIMVGAATTFLGIIPLAFASNFIFRVFFKMFILIIGFGV 1755
D++MI FV +GRC G V +R+WL +GG+V V+AAG+AA+G+NSGFGVPFT+L Q+LPFIL+GIGVDDMFVIVAA+D TDP L +EERVALG+KRCGVS+T +FVALLT+D RQ+AG+ D CC +S+ L+Q +Q R +T A++ +DVR + IG MK+KY PF+LSAKGK VLL + GLLAAGIYGVTQATQG DV++LAPD HF+ EY SR Y + +VPLN+YT++VDY V VQA IQ+ D+ MLE V+GP+ SWL SF+ WA T YSAN+G SGGYPVY D DTFY AL FL DE NARF D+V+DD GLIKISRSE FL ++ DT+ +D+LLD R V DQS L+P+ FA+S+VF EQ+LVIY+EL+ +F +ALLAV+++SL VLGK++I LVC T+V+IDVELLGF+YH+ L +NS TVI+LIMAVGLVVDYMVHIVHYFLHQDPSIPKDARIA ALGEIGPS+MVGAATTFLGI+PLAFA+N IFRVFFKMF++II FGV
Sbjct: 287 DVLMIAFVSVTIGRCCRGHVKQRSWLAIGGIVFVIAAGVAAYGVNSGFGVPFTTLSQMLPFILVGIGVDDMFVIVAAYDNTDPLLAVEERVALGIKRCGVSIT-----------------------------------------SFVALLTIDAKRQSAGRIDCYCCLTSETHLQQQERQHQEGIQRGVTLPASNGESANNTQGKHADEADVRQLSTIGRLMKDKYAPFVLSAKGKALVLLASAGLLAAGIYGVTQATQGLDVLDLAPDGHFSIEYTVRSRYYDFDIQEWYVPLNVYTQEVDYPDVAVQAEIQSIDDEMLELNNVDGPVDSWLASFIVWAEANTTYSANVGTSGGYPVYDDRDTFYTALSAFLEDEDNARFLEDVVFDDDGLIKISRSEMFLINLVDTDNNLDALLDTREVSDQSTLDPQPFAYSDVFGFTEQYLVIYDELLASFGLALLAVLILSLFVLGKVAIVVLVCVTLVIIDVELLGFVYHWNLNVNSITVIELIMAVGLVVDYMVHIVHYFLHQDPSIPKDARIADALGEIGPSVMVGAATTFLGIMPLAFANNVIFRVFFKMFLVIISFGV 833
BLAST of mRNA_H-elongata_contig584.13325.1 vs. uniprot
Match: D8LCK9_ECTSI (Similar to Patched domain-containing protein 3, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCK9_ECTSI) HSP 1 Score: 640 bits (1652), Expect = 1.990e-219 Identity = 336/581 (57.83%), Postives = 422/581 (72.63%), Query Frame = 1
Query: 22 MIIFVQCILGRCLSGPVLRRTWLGLGGVVCVLAAGLAAFGLNSGFGVPFTSLVQILPFILIGIGVDDMFVIVAAFDQTDPALPIEERVALGLKRCGVSVTYTSLTNFAAFMLGSTTSLPAVEYFCLYAGTAILLNFFLQISAFVALLTMDVNRQNAGKFDWCCCFSSKKFLEQSAKQRDITTIATSTXXXXXXXXXXXXXSDVRIGRI---GMFMKEKYTPFLLSAKGKTRVLLGTTGLLAAGIYGVTQATQGFDVINLAPDDHFAREYIEASRDYMLEFNSHFVPLNIYTRDVDYTKVIVQASIQATDELMLEQPYVEGPLQSWLVSFVAWASNKTEYSANIGKSGGYPVYKDPDTFYIALVDFLNDESNARFESDIVYDDAGLIKISRSEFFLSDITDTNKQVDSLLDARNVVDQSNLEPEQFAFSEVFILIEQFLVIYNELILNFSMALLAVVVMSLIVLGKISITALVCFTVVVIDVELLGFIYHYGLEINSTTVIQLIMAVGLVVDYMVHIVHYFLHQDPSIPKDARIASALGEIGPSIMVGAATTFLGIIPLAFASNFIFRVFFKMFILIIGFGV 1755
MI+F+ ILG+C GPV RR+WLG+ GV +++AG+AA+GLNS FGVPFT+L Q+LPFIL+GIGVDDM VIV++FD TDPALP+E R+A LKRCGVS+TYTS+TN AAFMLGSTTSLPAV +AF A L +D NRQ AGK DW CC K +A Q D D + +I G FM+EKYTPF+LS KGK VL+G+ + AAG+YGVTQAT+GFDVI+LAPD H A+ Y + +R+Y LE ++ F+PL++YT +VDY V VQA IQ TD LM++Q +V GP+ SWL ++W +N TEYS N+G SGGYPVY+D DTFY AL +F D N+RF SD VY G I+ISR+ +L D+T T +++L D+R VV +S L+P+ AFS F+ EQFLVIY+EL++NF MAL+AV V S+ +LG+ I ALVCFT+V+IDVELLGF+YH+ L++NS TVI+LIMAVGLVVDYMVHIVHYFLHQDP KD RIA LGEIGPS++VGAATTFLGI P+AFA+N +FRVFFKMF++IIGFGV
Sbjct: 291 MIVFITVILGKCGEGPVRRRSWLGVAGVGFIISAGVAAYGLNSAFGVPFTTLSQVLPFILVGIGVDDMIVIVSSFDHTDPALPVERRIADALKRCGVSITYTSMTNVAAFMLGSTTSLPAV-------------------TAFAACLAIDANRQKAGKMDWLCCL--KAGARYTALQEDGVERMHGRPPEAREDQPRKSSQDAKAMQITPFGRFMREKYTPFILSTKGKALVLVGSACIFAAGVYGVTQATEGFDVIDLAPDTHHAQYYTDLAREYELEIDTQFIPLSVYTLEVDYPDVAVQAQIQGTDSLMVDQRFVVGPITSWLSGLLSWTANHTEYSTNVGTSGGYPVYEDRDTFYTALAEFTQDGDNSRFLSDFVYKTDGTIEISRTTMYLIDLTSTENGINALKDSREVVGESTLDPQPLAFSAYFVFSEQFLVIYDELMMNFVMALVAVAVFSVFILGRWKIIALVCFTLVIIDVELLGFVYHWRLDVNSLTVIELIMAVGLVVDYMVHIVHYFLHQDPDRDKDVRIADGLGEIGPSVVVGAATTFLGITPMAFAANHVFRVFFKMFLIIIGFGV 850
BLAST of mRNA_H-elongata_contig584.13325.1 vs. uniprot
Match: A0A6H5L5K0_9PHAE (SSD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5K0_9PHAE) HSP 1 Score: 523 bits (1347), Expect = 3.810e-175 Identity = 296/586 (50.51%), Postives = 370/586 (63.14%), Query Frame = 1
Query: 16 IVMIIFVQCILGRCLSGPVLRRTWLGLGGVVCVLAAGLAAFGLNSGFGVPFTSLVQILPFILIGIGVDDMFVIVAAFDQTDPALPIEERVALGLKRCGVSVTYTSLTNFAAFMLGSTTSLPAVEYFCLYAGTAILLNFFLQISAFVALLTMDVNRQNAGKFDWCCCFSSKKFLEQSAKQ------RDITTIATSTXXXXXXXXXXXXXSDV-RIGRIGMFMKEKYTPFLLSAKGKTRVLLGTTGLLAAGIYGVTQATQGFDVINLAPDDHFAREYIEASRDYMLEFNSHFVPLNIYTRDVDYTKVIVQASIQATDELMLEQPYVEGPLQSWLVSFVAWASNKTEYSANIGKSGGYPVYKDPDTFYIALVDFLNDESNARFESDIVYDDAGLIKISRSEFFLSDITDTNKQVDSLLDARNVVDQSNLEPEQFAFSEVFILIEQFLVIYNELILNFSMALLAVVVMSLIVLGKISITALVCFTVVVIDVELLGFIYHYGLEINSTTVIQLIMAVGLVVDYMVHIVHYFLHQDPSIPKDARIASALGEIGPSIMVGAATTFLGIIPLAFASNFIFRVFFKMFILIIGFG 1752
++M++FV +GRC +GPV +R+WLG+GGV+ V+AAGLAA+GLNSGF +PFTSL QILPFIL+GIGVDDM ++AFVALLTMD NRQ AGK DWCCCF+SKK+L++ +Q R +T A++ ++V ++ IG MK+KY P LLSAKGK LLG+ LLAA + +R Y + +VP+N+YT+DVDY V+VQA +Q+ D M+E V+GPL SWL SF+ WA T YSAN+G SGGYPVY D DTFY AL FL DE NARF D+++DD GLIKISRS+ +L ++ DT VD+L D R+V DQS L+P+ FA+S VF+ EQF+VIYNEL+ +F +ALLAV+ +SL VLGK V+IDVELLGF+YH+ L++NS TVI+LIMAVGLVVDYMVHIVHYFLHQDPSIPKDARIA ALGEIGPS+MVGAATTFLGI+PLAFA+N IFRVFFKMF++II FG
Sbjct: 260 VLMVVFVSVAIGRCCTGPVKQRSWLGVGGVMLVIAAGLAAYGLNSGFDIPFTSLSQILPFILVGIGVDDM-----------------------------------------------------------------------MTAFVALLTMDANRQKAGKIDWCCCFTSKKYLQEQERQQQEGIQRGVTLPASNGGGANISQRDLNLKAEVHQLSTIGRLMKDKYAPSLLSAKGKIVALLGSAALLAADT--------------------------DRARFYDFDIQEWYVPMNVYTQDVDYPDVMVQAEMQSVDAEMIETKNVDGPLDSWLASFIVWAEANTTYSANVGTSGGYPVYNDRDTFYTALSAFLADEDNARFVPDVIFDDEGLIKISRSDMYLVNLVDTENNVDALRDTRDVADQSTLDPQPFAYSGVFVFSEQFVVIYNELLSSFGLALLAVLALSLFVLGK-----------VMIDVELLGFVYHWNLDVNSITVIELIMAVGLVVDYMVHIVHYFLHQDPSIPKDARIAEALGEIGPSVMVGAATTFLGIMPLAFANNVIFRVFFKMFLVIISFG 737
BLAST of mRNA_H-elongata_contig584.13325.1 vs. uniprot
Match: A0A6H5JGQ4_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGQ4_9PHAE) HSP 1 Score: 350 bits (897), Expect = 4.580e-110 Identity = 238/542 (43.91%), Postives = 316/542 (58.30%), Query Frame = 1
Query: 232 IVAAFDQTDPALPIEERVALGLKRCGVSVT-----------YTSLTNFAAFMLGSTTSLPAVEYFCLYAGTAILLNFFLQIS----AFVALLTMDVNRQNAGKFDWCCCFSSKKFLEQSAK------QRDITTIATSTXXXXXXXXXXXXXSDVRIGRIGMFMKEKYTPFLLSAKGKTRVLLGTTGLLAAGIYGVTQATQGFDVINLAPDDHFAREYIEASRDYMLEFNSHFVPLNIYTRDVDYTKVIVQASIQATDELMLEQPYVEGPLQSWLVSFVAWASNKTEYSANIGKSGGYPVYKDPDTFYI-------ALVDFLNDESNARFESDIV--YDDAGLI-----KISRSEFFLSDITDTNKQVDSLLDARNVVDQSNLEPEQFAFSEVFILIEQFLVIYNELILNFSMALLAVVVMSLIVLGKISITALVCFTVVVIDVELLGFIYHYGLEINSTTVIQLIMAVGLVVDYMVHIVHYFLHQDPSIPKDARIASALGEIGPSIMVGAATTFLGIIPLAFASNFIFRVFFKMFILIIGFG 1752
IVAA+D TDP+L +EERVA G+KRCGVSVT YTSLTNF AFMLG +SLPAVEYFCLYAGTAIL +FFL S AFVALLTMD NRQ AGK D CCCF+SKK+L++ + QR +T ++ + + + K LS L+G+ + +G Y V F Y S E N+ F+ ++ + + +++ S+ + + + E + L + + + ++A+ +G ++ + ALV FL S D +G++ +ISRSE +L ++ DT+ +VD+L D R V DQS L+P+ FA+S++F+ EQ+L IYNEL+ +F +ALLAV+V+SL VLGK V+IDVELLGF+YH+ L++N T I+LIMAVGLVVDYMVHIVHYFLHQDPSIPKDARIA ALGEIGPS+M GAATTFLGI+PLAFA+N IFRVFF MF++II FG
Sbjct: 14 IVAAYDHTDPSLTMEERVAFGVKRCGVSVTALRRSATYLSEYTSLTNFFAFMLGRVSSLPAVEYFCLYAGTAILFDFFLPESKNNRAFVALLTMDANRQKAGKIDSCCCFTSKKYLQEQERHHQEGIQRGVTLPDSNVES---------------VNKSRRALDRKAEVHQLS-------LIGSANVGTSGSYPVYDDRDTF--------------YAALSAFLQDEDNARFLADVVFDDEGAHRGTVLRQSLSDQVSVFVGRENRE----AGLCDVDLFPACRRLFAASAAAAGAPELFSPMKSRTFRRGGEKEALV-FLAPADLRMIISPFPPPLDASGVLPLAVSQISRSEMYLINLVDTDNKVDTLEDKREVADQSTLDPQAFAYSDMFLFAEQYLAIYNELLSSFGLALLAVLVLSLFVLGK-----------VIIDVELLGFVYHWNLDMNGITAIELIMAVGLVVDYMVHIVHYFLHQDPSIPKDARIAEALGEIGPSVMAGAATTFLGIMPLAFANNVIFRVFFNMFLVIISFG 503
BLAST of mRNA_H-elongata_contig584.13325.1 vs. uniprot
Match: A0A7S2WB13_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WB13_9STRA) HSP 1 Score: 357 bits (916), Expect = 1.740e-108 Identity = 234/642 (36.45%), Postives = 357/642 (55.61%), Query Frame = 1
Query: 19 VMIIFVQCILGRCLSGPVLRRTWLGLGGVVCVLAAGLAAFGLNSGFGVPFTSLVQILPFILIGIGVDDMFVIVAAFDQTDPALPIEERVALGLKRCGVSVTYTSLTNFAAFMLGSTTSLPAVEYFCLYAGTAILLNFFLQISAFVALLTMDVNRQNAGKFDWCCCF----------------------------SSKKFLEQSAKQRD-------------ITTIATSTXXXXXXXXXXXXXS---------DVRIGR----IGMFMKEKYTPFLLSAKGKTRVLLGTTGLLAAGIYGVTQATQGFDVINLAPDDHFAREYIEASRDYMLEFNSHFVPLNIYTRDVDYTKVIVQASIQATDE--LMLEQPYVEGPLQSWLVSFVAWASNKTE-YSANIGKSGGYPVYKDPDTFYIALVDFLNDESNARFESDIVYDDAGL-------IKISRSEFFLSDITDTNKQVDSLLDARNVVDQSNLEPEQFAFSEVFILIEQFLVIYNELILNFSMALLAVVVMSLIVLGKISITALVCFTVVVIDVELLGFIYHYGLEINSTTVIQLIMAVGLVVDYMVHIVHYFLHQDPSIPKDARIASALGEIGPSIMVGAATTFLGIIPLAFASNFIFRVFFKMFILIIGFG 1752
+MI F +L + + V R L + G++ +L A + +GL+SG GV F S+ Q+LPFI++GIGVDD+ +IV+AFD TD L E R++L L+RCGVS+TYT+LT+ +AF LG+T++LPA++ FC+YA AIL NF Q + F AL+ D R N+ K D CC SS + L +A + D +T ++S S +GR + F E Y P L + ++L G+LA IYGVTQ QGFDVI+L PDD + R+Y+ +RD + P++I + +DY VQ + ++ L L+ + EGP+ SW+ SF W + T Y+ ++ + GY V + FY A++ F E RF++D+V+ + + I+ SR + + D ++D++LD+R+++ +++L FS ++ IE LV+ EL LN + AL+AV ++SL++L + + LV + VIDVE++G +Y +GL +N+ TV+QL+MAVGLVVDY HI+HY+L Q R+ AL EIGPS+++G TTFLG++PLAFA + IFR FF+MF+ II +G
Sbjct: 295 LMISFTCTVLAKGYN-VVQTRVGLSVAGIMIILLAIVTGYGLSSGLGVIFVSIHQVLPFIIVGIGVDDLLIIVSAFDSTDERLSSENRLSLALRRCGVSITYTTLTDVSAFFLGATSALPAIQAFCIYAAFAILFNFLFQCTMFTALMVYDTERMNSFKMDVLCCCQCIPPAAATAADSVSAPAWTQTSTSDAPSSSRTLAPAATRGDQLGEDQLPAETPKLTPTSSSQSPKQWLKSLITPRSMSPSMTLHGSRALGRSKTRLQYFFGEVYWPQLCKPWVRMAIILLFAGILAVNIYGVTQVNQGFDVIDLVPDDSYVRDYVTEARDLNVFIFEENTPVDIAYKSMDYHDQDVQEGMLELEDDFLSLKGGFTEGPVTSWIRSFTTWVQSDTSPYNTSVN-ADGYLV--NETLFYEAVLHFTQLELYTRFDTDVVFHNVTINGVPSLRIRNSRVSAYHVGLGDPLDEIDAMLDSRDLMKKADLPRTPIVFSPTYVNIETELVLPEELTLNLAFALVAVTIVSLLILVRPTAVLLVSMIICVIDVEIIGTMYFWGLNVNTVTVVQLVMAVGLVVDYTAHILHYYLQQPFHKEPMERLRDALVEIGPSVLLGCFTTFLGVMPLAFAQSVIFRTFFRMFLSIIVYG 932
BLAST of mRNA_H-elongata_contig584.13325.1 vs. uniprot
Match: A0A835YJJ3_9STRA (Patched family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJJ3_9STRA) HSP 1 Score: 344 bits (883), Expect = 2.610e-103 Identity = 223/646 (34.52%), Postives = 329/646 (50.93%), Query Frame = 1
Query: 16 IVMIIFVQCILGRCLSGPVLRRTWLGLGGVVCVLAAGLAAFGLNSGFGVPFTSLVQILPFILIGIGVDDMFVIVAAFDQTDPALPIEERVALGLKRCGVSVTYTSLTNFAAFMLGSTTSLPAVEYFCLYAGTAILLNFFLQISAFVALLTMDVNRQNAGKFDWCCCFSSKKFLEQSAKQRDITTIATSTXXXXXXXXXXXXXSDVRIGRIGMFMKEKYTPFLLSAKGKTRVLLGTTGLLAAGIYGVTQATQGFDVINLAPDDHFAREYIEASRDYMLEFNSHFVPLNIYTRDVDYTKVIVQAS---IQATDEL--------------------------------------MLEQPYVEGPLQSWLVSFVAWASNKTEYSANIGKSGGYPVYKDPDTFYIALVDFLNDESNARFESDIVYDDAGL--IKISRSEFFLSDITDTN----------------------KQVDSLLDARNVVDQSNLEPEQFAFSEVFILIEQFLVIYNELILNFSMALLAVVVMSLIVLGKISITALVCFTVVVIDVELLGFIYHYGLEINSTTVIQLIMAVGLVVDYMVHIVHYFLHQ--DPSIPKDARIASALGEIGPSIMVGAATTFLGIIPLAFASNFIFRVFFKMFILIIGFG 1752
++M +F LG+ V R LGL V C++ +G A+GL + FGVPFTSL Q+LPF+LIGIG+DD F++ A D +P LP ER+A + RCG+SV YTS+ NF FMLG+ ++LPA+EYFC+YAG A+L +F LQ+ +F+ALL D +RQ A K+D CC + S R+G +K + P LL+ G G++A I+GVTQ QG ++++L PD +AREY+ +R + + + PL + +D T V Q + +QA +L P+ GPL +W+ FVAWA+ +Y+A I G + + F AL +FL R+ D+V DD+G + +SR + +D D ++LL R++V S + FAFS+ ++ E LV+ +++L+F LL V V+SL +G + TA++ + ++D+E++ F+Y +GL IN+ T IQL+MA GL+ D VHI+HYF D SI K RI A EIGPS++ TTF+GI+ +AFA N IFR FF+M II G
Sbjct: 320 VLMAVFAMLTLGKL--DRVKGRARLGLICVTCIVISGAGAYGLCAAFGVPFTSLQQVLPFLLIGIGLDDAFIMAGALDLVNPDLPTAERIAEAMGRCGLSVFYTSIINFMVFMLGANSTLPAIEYFCIYAGVAVLFDFLLQVPSFIALLAYDTDRQRARKYDLLCCXXXXXXXXXXXXXXXXXXXXXAQGTPPPVQLESGSTS-----RVGRVLKRHFIPNLLTVPGALAAGTLLLGIMAVCIWGVTQVGQGLEILDLVPDSSYAREYVTVARAFYMFPYDNVQPLQLVFDALDVTDVSAQQAMIDLQAESAFRVQTDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVHVLANPHATGPLSTWISDFVAWAAASPKYAAAINAQGRFANAAE---FMPALAEFLAQPQYVRYTKDVVIDDSGAGGVSVSRVTMYSADTGDVXXXXXXXXXXXXXXXXXXXXXXXNSKEALLQVRDIVYASPIADNAFAFSDFYVNTETDLVLVQQVLLDFMYGLLVVFVLSLFFVGHLRYTAMLTAVIAILDMEIVAFLYFWGLTINTVTAIQLVMAAGLLTDLTVHIIHYFTAHGTDRSISKRDRIIDASAEIGPSVLFAGLTTFVGILTMAFAQNAIFRTFFRMLFTIIALG 955 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig584.13325.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig584.13325.1 >prot_H-elongata_contig584.13325.1 ID=prot_H-elongata_contig584.13325.1|Name=mRNA_H-elongata_contig584.13325.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=578bp MIIFVQCILGRCLSGPVLRRTWLGLGGVVCVLAAGLAAFGLNSGFGVPFTback to top mRNA from alignment at H-elongata_contig584:1691..20091+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig584.13325.1 ID=mRNA_H-elongata_contig584.13325.1|Name=mRNA_H-elongata_contig584.13325.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=18401bp|location=Sequence derived from alignment at H-elongata_contig584:1691..20091+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig584:1691..20091+ >mRNA_H-elongata_contig584.13325.1 ID=mRNA_H-elongata_contig584.13325.1|Name=mRNA_H-elongata_contig584.13325.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3468bp|location=Sequence derived from alignment at H-elongata_contig584:1691..20091+ (Himanthalia elongata Himel1 dioecious)back to top |