mRNA_H-elongata_contig58346.13318.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig58346.13318.1 vs. uniprot
Match: A0A6H5K6L9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6L9_9PHAE) HSP 1 Score: 521 bits (1342), Expect = 3.340e-181 Identity = 266/406 (65.52%), Postives = 310/406 (76.35%), Query Frame = 1
Query: 1 MALGTVKKLRKALLERAGKIFAERNPCASDELPVNGEELSSEQLESVTAECFQELGNINQTPVQHEMPGETTLEKRGAKNARISTKGKEKERFTLCLAVMADCSKVPLRIIFKGTPFNPPNKPGKGKIIQPRKGYIAAEVAPGNRTKFGHPAAGMSFGVQEKSWCDARECTLWISESWRLRPNNGSIITQRPSILVLDDFKCHRDVAFIVDLRKRCNTSVILIPGGLTPLLQPLDRMLNKQMKQLLREKYTAYTATAIADPTTGKLKPPGRGMVSTWCKKALAAITPDVVKTCFKICGLTLVLDGSEDHAWCMQNFGKGYRELLQKPRVVWKEAHPGV*LPPLQLPEVPDGELIGTNPITVAEKEVQGRLLPPTGGRKNDSDVELLEYDSDLECLGVLGGGEKERE 1218
MA TV KLR+AL++RAG+I+A R+P A DE P+ GE+L+SEQL SV AE F+ELGN++QTPVQHE+P ETTLEK GAK+ARIST GKEKERFTL LAVMAD KV RIIFKGTPF PP GKGK PRK +A E+ P NR K GHPA GMSFGVQEKSW D REC WIS SW+LRPNNGSI+ QRP ILVLDDFKCH+D FI L++ NT VI IPG LTPLLQPLDRMLNKQMK+LLR KYTAY+A+A+AD +GKLKPP RG+VSTWCK+A + TP+ VKTCF ICGLTL LDGSEDHAWC NFG+ YR+LL++ R VW H V LPPL+LP+VP G +NPIT A+KEV+G+LLP ++DS+VE+LE GGG E E
Sbjct: 63 MAWATVMKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQLASVEAEVFEELGNMDQTPVQHEIPVETTLEKTGAKDARISTGGKEKERFTLVLAVMADGKKVSPRIIFKGTPFTPPTVSGKGKSTLPRKNSVAWEIHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGRLTPLLQPLDRMLNKQMKRLLRRKYTAYSASAVADARSGKLKPPERGVVSTWCKEAWESSTPETVKTCFMICGLTLALDGSEDHAWCEHNFGEDYRDLLEEQRAVWLAEHADVTLPPLKLPKVPGG--FDSNPITAAQKEVEGKLLPYVAD-ESDSEVEVLEGXXXXXXXXXQGGGGAEGE 465
BLAST of mRNA_H-elongata_contig58346.13318.1 vs. uniprot
Match: A0A6H5KE45_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE45_9PHAE) HSP 1 Score: 504 bits (1299), Expect = 4.070e-173 Identity = 263/411 (63.99%), Postives = 299/411 (72.75%), Query Frame = 1
Query: 1 MALGTVKKLRKALLERAGKIFAERNPCASDELPVNGEELSSEQLESVTAECFQELGNINQTPVQHEMPGETTLEKRGAKNARIST--------------------------KGKEKERFTLCLAVMADCSKVPLRIIFKGTPFNPPNKPGKGKIIQPRKGYIAAEVAPGNRTKFGHPAAGMSFGVQEKSWCDARECTLWISESWRLRPNNGSIITQRPSILVLDDFKCHRDVAFIVDLRKRCNTSVILIPGGLTPLLQPLDRMLNKQMKQLLREKYTAYTATAIADPTTGKLKPPGRGMVSTWCKKALAAITPDVVKTCFKICGLTLVLDGSEDHAWCMQNFGKGYRELLQKPRVVWKEAHPGV*LPPLQLPEVPDGELIGTNPITVAEKEVQGRLLPPTGGRKNDSDVEL 1155
MA T+ KLRKALLERAG+I+A+R P A E P+ GE+LSS QLE VT E F++LGN++QTPVQ+EMP ETTLEK GAK+ARI+T GKEKERFTLCLAV AD +KVPLRIIFKGTPF PP PGKGK QPRK IA EV P NR+K G P GMSFGVQEKSWCD RE LWI +SW+LRPNNGS++ QR ILVLDDFKCH+D FI L++ NT VI IPGGLTPLLQPLDRMLNKQMK+LLR YTA+TA A DP TGKL PPGRG V+TWCK A A+ITP+ VKTCFKICGLTL LDGSEDHAWC+ NFG GYRELL++ RV W HP V LPPLQLP+VP N I A KE++ LLP R +DSD+E+
Sbjct: 150 MAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFKDLGNMDQTPVQYEMPVETTLEKTGAKDARIATGAGVCCIRTILKPLPYPPTSCILPPPPGKEKERFTLCLAVSADGTKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLREYKLWIKDSWKLRPNNGSVVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAARDPKTGKLAPPGRGAVATWCKNAWASITPETVKTCFKICGLTLALDGSEDHAWCLHNFGDGYRELLEQQRVEWLAEHPNVTLPPLQLPKVPAEST--ANHIEAAAKELEAGLLP----RGDDSDIEI 554
BLAST of mRNA_H-elongata_contig58346.13318.1 vs. uniprot
Match: A0A6H5JQM5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM5_9PHAE) HSP 1 Score: 495 bits (1275), Expect = 3.720e-169 Identity = 252/375 (67.20%), Postives = 289/375 (77.07%), Query Frame = 1
Query: 1 MALGTVKKLRKALLERAGKIFAERNPCASDELPVNGEELSSEQLESVTAECFQELGNINQTPVQHEMPGETTLEKRGAKNARISTKGKEKERFTLCLAVMADCSKVPLRIIFKGTPFNPPNKPGKGKIIQPRKGYIAAEVAPGNRTKFGHPAAGMSFGVQEKSWCDARECTLWISESWRLRPNNGSIITQRPSILVLDDFKCHRDVAFIVDLRKRCNTSVILIPGGLTPLLQPLDRMLNKQMKQLLREKYTAYTATAIADPTTGKLKPPGRGMVSTWCKKALAAITPDVVKTCFKICGLTLVLDGSEDHAWCMQNFGKGYRELLQKPRVVWKEAHPGV*LPPLQLPEVPDGELIGTNPITVAEKEVQGRLLPPTG 1125
+A T+ KLR ALLERAG+I+A RNP AS E P+ G++LS QLESV E F+ELGN++QTPVQ EMP ETTLEK GAK+ARIST GKEKERFTLCLAVMAD KVPLRIIFKG PF PP+ +GK QPRKG IAAEV P N+T FG+P +GMSFGVQE+SW DA ECTLW+SESW RPN+GS+I QR SILVLDDF R NT+VILIPGGLTPLLQPLDRML+K+MK+L+R +YT Y A+AIADP TGKL+PPGRG+VSTWCK++ AAIT + VK CFK+CGLTL LDGSED AWC NFG+GYRE+L + R W PGV LPPLQLPEV G NPI AEKEV +LLPP G
Sbjct: 236 LAFATLMKLRTALLERAGEIYARRNPPASGESPIKGKDLSPAQLESVATEVFEELGNMDQTPVQQEMPVETTLEKGGAKDARISTGGKEKERFTLCLAVMADGGKVPLRIIFKGKPFIPPSTARRGKNTQPRKGSIAAEVLPANQTNFGYPVSGMSFGVQERSWYDACECTLWLSESWGFRPNHGSVIKQRHSILVLDDF--------------RTNTTVILIPGGLTPLLQPLDRMLDKEMKRLMRRRYTQYMASAIADPKTGKLQPPGRGLVSTWCKESWAAITAETVKMCFKVCGLTLALDGSEDDAWCTHNFGEGYREVLVQQRAEWGAQRPGVTLPPLQLPEVSSAS--GANPIATAEKEVTAKLLPPEG 594
BLAST of mRNA_H-elongata_contig58346.13318.1 vs. uniprot
Match: A0A6H5KII4_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KII4_9PHAE) HSP 1 Score: 488 bits (1257), Expect = 8.790e-169 Identity = 258/434 (59.45%), Postives = 302/434 (69.59%), Query Frame = 1
Query: 16 VKKLRKALLERAGKIFAERNPCASDELPVNGEELSSEQLESVTAECFQELGNINQTPVQHEMPGETTLEKRGAKNARISTKGKEKERFTLCLAVMADCSKVPLRIIFKGTPFNPPNKPGKGKIIQPRKGYIAAEVAPGNRTKFGHPAAGMSFGVQEKSWCDARECTLWISESWRLRPNNGSIITQRPSILVLDDFKCHRDVAFIVDLRKRCNTSVILIPGGLTPLLQPLDRMLNKQMKQLLREKYTAYTATAIADPTTGKLKPPGRGMVSTWCKKALAAITPDVVKTCFKICGLTLVLDGSEDHAWCMQNFGKGYRELLQKPRVVWKEAHPGV*LPPLQLPEVPDGEL---------------------------------IGTNPITVAEKEVQGRLLPPTGGRKNDSDVELLEYDSDLECLGVLGGGEKERE 1218
V KLR+AL++RAG+I+A R+P A DE P+ GE+L+SEQL SV AE F++LGN++QTPVQHEMP ETTLEK GAK+AR+ST G+EKERFTL LAV AD KV LRIIF GTPF PP GKGK PRK +A E+ P NR K GHPA GMSFGVQEKSW D REC W S SW+LRPNNGSI+ QRP ILVLDDFKCH+D FI L++ NT VI IPGGLTPLLQPLDRMLNKQ K+LLR KYTAY+A+A D +GKLKPP RG+VSTWCK A +ITP+ VKTCFKICGLTL LDGSEDHAWC NFG+ YR+LL++ VW HP V LPPL+LP+VP +NPI A+KEV+G+LLP ++DS+VE+LE GGG E E
Sbjct: 2 VMKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQLASVEAEVFEDLGNMDQTPVQHEMPVETTLEKTGAKDARVSTGGEEKERFTLVLAVTADGKKVSLRIIFMGTPFIPPTVSGKGKSTLPRKNSVAWEMHPTNRAKHGHPANGMSFGVQEKSWSDQRECNGWTSGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGGLTPLLQPLDRMLNKQTKRLLRSKYTAYSASAT-DARSGKLKPPERGVVSTWCKGAWESITPETVKTCFKICGLTLALDGSEDHAWCAHNFGEDYRDLLEEQHAVWLAEHPNVTLPPLKLPKVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGFDSNPIMAAQKEVEGKLLPYVPD-ESDSEVEVLEGXXXXXXXXXQGGGGAEGE 433
BLAST of mRNA_H-elongata_contig58346.13318.1 vs. uniprot
Match: A0A6H5KRZ1_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRZ1_9PHAE) HSP 1 Score: 488 bits (1257), Expect = 1.170e-166 Identity = 254/385 (65.97%), Postives = 285/385 (74.03%), Query Frame = 1
Query: 1 MALGTVKKLRKALLERAGKIFAERNPCASDELPVNGEELSSEQLESVTAECFQELGNINQTPVQHEMPGETTLEKRGAKNARISTKGKEKERFTLCLAVMADCSKVPLRIIFKGTPFNPPNKPGKGKIIQPRKGYIAAEVAPGNRTKFGHPAAGMSFGVQEKSWCDARECTLWISESWRLRPNNGSIITQRPSILVLDDFKCHRDVAFIVDLRKRCNTSVILIPGGLTPLLQPLDRMLNKQMKQLLREKYTAYTATAIADPTTGKLKPPGRGMVSTWCKKALAAITPDVVKTCFKICGLTLVLDGSEDHAWCMQNFGKGYRELLQKPRVVWKEAHPGV*LPPLQLPEVPDGELIGTNPITVAEKEVQGRLLPPTGGRKNDSDVEL 1155
MA T+ KLRKALLERAGKI+A+R P A E P+ GE+LSS QLE VT E F+ELGN++QTPVQHE P E L KR + S +ERFTLCLAV AD KVPLRIIFKGTPF PP PGKGK QPRK IA EV P NR+K G P GMSFGVQEKSWCD REC LWI +SW+LRPNNGSI+ QR ILVLDDFKCH+D FI L++ NT VI IPGGLTPLLQPLDRMLNKQMK+LLR YTA+TA A DP TGKL PPGRG V+TWCK A A+ITP+ KTCFKICGLTL LDGSEDHAWC+ NFG GYRELL++ RV W HP V LPPLQLP+VP N I A KE++ LLP R +DSD+E+
Sbjct: 187 MAWATLMKLRKALLERAGKIYAQRYPPAPGENPIRGEDLSSSQLELVTDELFEELGNMDQTPVQHETPVER-LWKRPVRRMPASP---PEERFTLCLAVSADGKKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLRECKLWIKDSWKLRPNNGSIVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAARDPKTGKLAPPGRGAVATWCKNAWASITPETAKTCFKICGLTLALDGSEDHAWCLHNFGDGYRELLEQQRVEWLAEHPNVTLPPLQLPKVPAEST--ANHIEAAAKELEAGLLP----RGDDSDIEI 561
BLAST of mRNA_H-elongata_contig58346.13318.1 vs. uniprot
Match: A0A6H5K583_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K583_9PHAE) HSP 1 Score: 501 bits (1291), Expect = 3.600e-165 Identity = 267/453 (58.94%), Postives = 314/453 (69.32%), Query Frame = 1
Query: 1 MALGTVKKLRKALLERAGKIFAERNPCASDELPVNGEELSSEQLESVTAECFQELGNINQTPVQHEMPGETTLEKRGAKNARISTKGKEKERFTLCLAVMADCSKVPLRIIFKGTPFNPPNKPGKGKIIQPRKGYIAAEVAPGNRTKFGHPAAGMSFGVQEKSWCDARECTLWISESWRLRPNNGSIITQRPSILVLDDFKCHRDVAFIVDLRKRCNTSVILIPGGLTPLLQPLDRMLNKQMKQLLR------------------------------------------------EKYTAYTATAIADPTTGKLKPPGRGMVSTWCKKALAAITPDVVKTCFKICGLTLVLDGSEDHAWCMQNFGKGYRELLQKPRVVWKEAHPGV*LPPLQLPEVPDGELIGTNPITVAEKEVQGRLLPPTGGRKNDSDVELLEYDSDLECL-----GVLGG 1200
+A T+ KLR ALLERAG+I+A RNP AS E P+ G++L+ QLESV A+ F+ELGN++QTPVQ EMP ETTLEKRG K+ARIST GKEK+RFT CLAVMAD KVP RIIFKG PF PP+ G+ K Q RKGYIAAEV NRTKFG+P +GM F VQEKSWCDARECTLW+SESWR RPN+GS+I QR SILVLDDF+CHR +F+ DLR+R NT+VILIPGGLTPLLQPLDRMLNK+MK+L+R T Y A+AIADP TGKL+PPGRG+VST K++ AAITP+ VK CFK+CGLTL LDGSED AW NFG+GYRE+L + W+ HPGV LPPLQLPEV G NPI AEKEV +LLPP G +D +VE+++ DSD+E L G GG
Sbjct: 132 LAFATLMKLRTALLERAGEIYARRNPPASGESPIKGKDLTPAQLESVAAKVFEELGNMDQTPVQQEMPVETTLEKRGVKDARISTGGKEKDRFTPCLAVMADGGKVPQRIIFKGKPFIPPSTAGREKNTQTRKGYIAAEVLLANRTKFGYPVSGMFFVVQEKSWCDARECTLWLSESWRFRPNHGSVIKQRHSILVLDDFRCHRSESFVKDLRRRTNTTVILIPGGLTPLLQPLDRMLNKEMKRLMRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQYMASAIADPKTGKLQPPGRGLVSTRYKESWAAITPETVKMCFKVCGLTLALDGSEDDAWGTHNFGEGYREVLVQQHAEWEAQHPGVTLPPLQLPEVSSAP--GANPIATAEKEVTAKLLPPEGD--SDDEVEIIDGDSDVELLDGPWVGAAGG 580
BLAST of mRNA_H-elongata_contig58346.13318.1 vs. uniprot
Match: A0A6H5KEE8_9PHAE (DDE-1 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEE8_9PHAE) HSP 1 Score: 465 bits (1196), Expect = 2.320e-157 Identity = 243/385 (63.12%), Postives = 271/385 (70.39%), Query Frame = 1
Query: 1 MALGTVKKLRKALLERAGKIFAERNPCASDELPVNGEELSSEQLESVTAECFQELGNINQTPVQHEMPGETTLEKRGAKNARISTKGKEKERFTLCLAVMADCSKVPLRIIFKGTPFNPPNKPGKGKIIQPRKGYIAAEVAPGNRTKFGHPAAGMSFGVQEKSWCDARECTLWISESWRLRPNNGSIITQRPSILVLDDFKCHRDVAFIVDLRKRCNTSVILIPGGLTPLLQPLDRMLNKQMKQLLREKYTAYTATAIADPTTGKLKPPGRGMVSTWCKKALAAITPDVVKTCFKICGLTLVLDGSEDHAWCMQNFGKGYRELLQKPRVVWKEAHPGV*LPPLQLPEVPDGELIGTNPITVAEKEVQGRLLPPTGGRKNDSDVEL 1155
MA T+ KLRKALLERAG+I+A+R P A E P+ GE+LSS QLE VT E F+ELGN++QTPVQHE GKEKERFTLCLAV AD KVPLRIIFKGTPF PP PGKGK QPRK IA EV P NR+K G P GMSFGVQEKSWCD REC LWI SW+LRPNNGSI+ QR ILVLDDFKCH+D FI L++ NT VI IPGGLTPLLQ LDRMLNKQMK+LL P TGKL PPGRG V+TWCK A A+ITP+ VKTCFKICGLTL LDGSEDHAWC+ NFG GYRELL++ RV W HP V LPPLQLP+VP N I A KE++ LLP R +DSD+E+
Sbjct: 204 MAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFEELGNMDQTPVQHER----------------DAGGKEKERFTLCLAVSADGKKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVEGMSFGVQEKSWCDLRECKLWIKGSWKLRPNNGSIVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQLLDRMLNKQMKRLLXXXXXXXXXXXXXXPKTGKLAPPGRGAVATWCKNAWASITPETVKTCFKICGLTLALDGSEDHAWCLHNFGDGYRELLEQQRVEWLAEHPNVTLPPLQLPKVPAEST--ANHIEAAAKELEAELLP----RGDDSDIEI 566
BLAST of mRNA_H-elongata_contig58346.13318.1 vs. uniprot
Match: A0A6H5K8Y4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8Y4_9PHAE) HSP 1 Score: 477 bits (1228), Expect = 1.660e-155 Identity = 264/489 (53.99%), Postives = 297/489 (60.74%), Query Frame = 1
Query: 1 MALGTVKKLRKALLERAGKIFAERNPCASDELPVNGEELSSEQLESVTAECFQELGNINQTPVQHEMPGETTLEKRGAKNARISTKGKEKERFTLCLAVMADCSKVPLRIIFKGTPFNPPNKPGKGKIIQPRKGYIAAEVAPGNRTKFGHPAAGMSFGVQEKSWCDARECTLWISESWRLRPNNGSIITQRPSILVLDDFKCHRDVAFIVDLRKRCNTSVILIPGGLTPLLQPLDRMLNKQMKQLLREKYTAYTATAIADPTTGKLKPPGRGMVSTWCKKALAAITPDVVKTCFKICGLTLV--------------------------------------------------------------------------------------------------------LDGSEDHAWCMQNFGKGYRELLQKPRVVWKEAHPGV*LPPLQLPEVPDGELIGTNPITVAEKEVQGRLLPPTGGRKNDSDVEL 1155
MA T+ KLRKALLERAG+I+A+R P A E P+ GE+LSS QLE VT E F+ELGN++QTPVQHEMP ETTLE GAK+ARI+T GKEKERFTLCLAV AD KVPLRIIFKGTPF PP PGKGK QPRK IA EV P NR+K G P GMSFGVQEKSWCD REC LWI +SW+LRPNNGSI+ QR ILVLDDFKCH+D FI L++ NT VI IPGGL PL QPLDRMLNKQMK+LLR YTA+TA A DP TGKL PPGRG V+TWCK A A+ITP++VKTCFKICGLTL LDGSEDHAWC+ NFG GYRELL++ RV W HP V LPPLQLP+VP N I A KE++ LLP R +DSD+E+
Sbjct: 217 MAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFEELGNMDQTPVQHEMPVETTLENTGAKDARIATGGKEKERFTLCLAVSADGKKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLRECKLWIKDSWKLRPNNGSIVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLIPLFQPLDRMLNKQMKRLLRGMYTAHTAKAARDPKTGKLVPPGRGAVATWCKNAWASITPEIVKTCFKICGLTLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPLDRMLNKQMKRLLRGMYTAHTAKAARDPKPGKLVPPGRGAVATWCKNAWASITPEIVKTCFKICGLTLALDGSEDHAWCLHNFGDGYRELLEQQRVEWLAEHPNVTLPPLQLPKVPAEST--ANHIEAAAKELEAGLLP----RGDDSDIEI 699
BLAST of mRNA_H-elongata_contig58346.13318.1 vs. uniprot
Match: A0A6H5JTG5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTG5_9PHAE) HSP 1 Score: 456 bits (1173), Expect = 1.630e-153 Identity = 250/414 (60.39%), Postives = 289/414 (69.81%), Query Frame = 1
Query: 1 MALGTVKKLRKALLERAGKIFAERNPCASDELPVNGEELSSEQLESVTAECFQELGNINQTPVQHEMPGETTLEKRGAKNARISTKGKEKERFTLCLAVMADCSKVPLRIIFKGTPFNPPNKPGKGKIIQPRKGYIAAEVAPGNRTKFGHPAAGMSFGVQEKSWCDARECTLWISESWRL--------RPNNGSIITQRPSILVLDDFKCHRDVAFIVDLRKRCNTSVILIPGGLTPLLQPLDRMLNKQMKQLLREKYTAYTATAIADPTTGKLKPPGRGMVSTWCKKALAAITPDVVKTCFKICGLTLVLDGSEDHAWCMQNFGKGYRELLQKPRVVWKEAHPGV*LPPLQLPEVPDGELIGTNPITVAEKEVQGRLLPPTGGRKNDSDVELLEYDSDLECLGVLGGGEKERE 1218
MA TV KLR+AL++RAG+I+A R+P A DE P+ GE+L+SEQ SV AE F+ELGN++QTPVQHEMP ETTLE G K+ARIST GKEKERFTL LAVMAD V IIFKGTPF PP GKGK PRK +A EV P NR K GHPA GMSFGVQEKSW +EC WI SW+L RPNNGSI+ QRP ILVLDDFKCH+D FI L + NT VI IPGGLTPLLQPLDRMLNKQMK+LLR KYTAY+A A+AD +GKLKPP RG+VSTWCK+A +T + V TCFKICGLTL LDGSEDHA C + HP V LPPL+LP+VP+G +NPIT A+KEV+G+LLP ++DS+VE+LE GGG E E
Sbjct: 217 MAWATVTKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQPASVEAEVFEELGNMDQTPVQHEMPVETTLEDTGGKDARISTGGKEKERFTLVLAVMADGKMVSPCIIFKGTPFIPPTVSGKGKSTLPRKNSVAWEVHPANRAKHGHPANGMSFGVQEKSWSGQQECNGWIPGSWKLCPNNGSMXRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALNRDANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSAPAVADARSGKLKPPERGVVSTWCKEAWEFVTSETVNTCFKICGLTLALDGSEDHA-CTPCIAE----------------HPDVTLPPLKLPKVPEG--FDSNPITAAQKEVEGKLLPYVAD-ESDSEVEVLEGXXXXXXXXXQGGGGAEGE 610
BLAST of mRNA_H-elongata_contig58346.13318.1 vs. uniprot
Match: A0A6H5JUK2_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUK2_9PHAE) HSP 1 Score: 448 bits (1152), Expect = 4.310e-153 Identity = 231/359 (64.35%), Postives = 265/359 (73.82%), Query Frame = 1
Query: 1 MALGTVKKLRKALLERAGKIFAERNPCASDELPVNGEELSSEQLESVTAECFQELGNINQTPVQHEMPGETTLEKRGAKNARISTKGKEKERFTLCLAVMADCSKVPLRIIFKGTPFNPPNKPGKGKIIQPRKGYIAAEVAPGNRTKFGHPAAGMSFGVQEKSWCDARECTLWISESWRLRPNNGSIITQRPSILVLDDFKCHRDVAFIVDLRKRCNTSVILIPGGLTPLLQPLDRMLNKQMKQLLREKYTAYTATAIADPTTGKLKPPGRGMVSTWCKKALAAITPDVV-----------------------------KTCFKICGLTLVLDGSEDHAWCMQNFGKGYRELLQKPRVV 990
MA TV KLR+AL+ RAG+I+A R+P A DE P+ GE+L+ EQL SV AE F+ELGN++QTPVQHEMP ETTLEK GAK+ARIST GKEKERFTL LAVMAD KV RIIFKGTPF PP GKGK PRK +A E+ P NR K HPA GMSFGVQEKSW D REC WIS SW+LRPNNGSI+ QRP ILVLDDFKCH+D +I L++ NT VI+IPGGLTPLLQPLDRMLNKQMK+LLR KYTAY+A+A+AD +GKLKPP RG+VSTWCK+A +ITP+ V KTCFKICGLTL LDGSEDHAWC NFG+ YR+LL++ V
Sbjct: 63 MAWATVMKLREALVRRAGEIYARRHPPAPDESPIKGEDLTFEQLASVEAEVFKELGNMDQTPVQHEMPVETTLEKTGAKDARISTGGKEKERFTLVLAVMADGKKVSPRIIFKGTPFIPPAVSGKGKSTLPRKNSVAWEIHPANRAKHDHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGYIAALKRDANTIVIVIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSASAVADARSGKLKPPERGVVSTWCKEAWESITPETVSSVRKERFALGDVRAWSGENPACSVXETVKTCFKICGLTLALDGSEDHAWCEHNFGEDYRDLLEEQYAV 421 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig58346.13318.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig58346.13318.1 >prot_H-elongata_contig58346.13318.1 ID=prot_H-elongata_contig58346.13318.1|Name=mRNA_H-elongata_contig58346.13318.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=339bp MALGTVKKLRKALLERAGKIFAERNPCASDELPVNGEELSSEQLESVTAEback to top mRNA from alignment at H-elongata_contig58346:1003..2449+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig58346.13318.1 ID=mRNA_H-elongata_contig58346.13318.1|Name=mRNA_H-elongata_contig58346.13318.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1447bp|location=Sequence derived from alignment at H-elongata_contig58346:1003..2449+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig58346:1003..2449+ >mRNA_H-elongata_contig58346.13318.1 ID=mRNA_H-elongata_contig58346.13318.1|Name=mRNA_H-elongata_contig58346.13318.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2034bp|location=Sequence derived from alignment at H-elongata_contig58346:1003..2449+ (Himanthalia elongata Himel1 dioecious)back to top |