mRNA_H-elongata_contig58327.13314.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig58327.13314.1 vs. uniprot
Match: A0A6H5K128_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K128_9PHAE) HSP 1 Score: 153 bits (387), Expect = 2.840e-41 Identity = 76/85 (89.41%), Postives = 80/85 (94.12%), Query Frame = 1
Query: 1 MIASTVSSKMLSAAAKVEGFTFEETLPGFKWMAHRGQELKAQGKTILFAYEEAIGFGPGDVVLEKDGLSSAALFAEMFVALRGRD 255
MIASTVSSKMLSA A+ EGFTFEETLPGFKWM HRGQ+LKA+GKTILFAYEEAIGFGPGDVV EKDGLSSAALFAEM VALRG+D
Sbjct: 456 MIASTVSSKMLSAVARFEGFTFEETLPGFKWMGHRGQQLKAEGKTILFAYEEAIGFGPGDVVFEKDGLSSAALFAEMLVALRGQD 540
BLAST of mRNA_H-elongata_contig58327.13314.1 vs. uniprot
Match: D7G3G9_ECTSI (Bifunctional Aldehyde Dehydrogenase/Phosphoglucomutase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3G9_ECTSI) HSP 1 Score: 120 bits (301), Expect = 1.220e-29 Identity = 58/65 (89.23%), Postives = 61/65 (93.85%), Query Frame = 1
Query: 1 MIASTVSSKMLSAAAKVEGFTFEETLPGFKWMAHRGQELKAQGKTILFAYEEAIGFGPGDVVLEK 195
MIASTVSSKMLSA A+ EGFTFEETLPGFKWM HRGQ+LKA+GKTILFAYEEAIGFGPGDVV EK
Sbjct: 559 MIASTVSSKMLSAVARFEGFTFEETLPGFKWMGHRGQQLKAEGKTILFAYEEAIGFGPGDVVFEK 623
BLAST of mRNA_H-elongata_contig58327.13314.1 vs. uniprot
Match: A0A813BEV9_9DINO (PGM2 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813BEV9_9DINO) HSP 1 Score: 102 bits (254), Expect = 6.870e-25 Identity = 48/77 (62.34%), Postives = 63/77 (81.82%), Query Frame = 1
Query: 1 MIASTVSSKMLSAAAKVEGFTFEETLPGFKWMAHRGQELKAQGKTILFAYEEAIGFGPGDVVLEKDGLSSAALFAEM 231
M+ASTVSSKM+ A A+ GF FEETL GFKWM +R L+A+GKT+LF++EEAIGF GD VL+KDG+++AA+F +M
Sbjct: 1 MLASTVSSKMIGAMARANGFHFEETLTGFKWMGNRAAALQAEGKTVLFSFEEAIGFCLGDTVLDKDGVAAAAVFTQM 77
BLAST of mRNA_H-elongata_contig58327.13314.1 vs. uniprot
Match: UPI001CF4786B (phosphoglucomutase-2-like isoform X2 n=1 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF4786B) HSP 1 Score: 100 bits (250), Expect = 7.260e-25 Identity = 51/84 (60.71%), Postives = 65/84 (77.38%), Query Frame = 1
Query: 1 MIASTVSSKMLSAAAKVEGFTFEETLPGFKWMAHRGQELKAQGKTILFAYEEAIGFGPGDVVLEKDGLSSAALFAEMFVALRGR 252
MIASTVS+KML + A+ EGF F+ETL GFKWM + +L AQGKT+LF++EEAIGF G +VL+KDG+S+A + AEM LR R
Sbjct: 1 MIASTVSTKMLQSMAREEGFVFKETLTGFKWMGNLAFDLMAQGKTVLFSFEEAIGFMFGTMVLDKDGISAAVVMAEMASHLRSR 84
BLAST of mRNA_H-elongata_contig58327.13314.1 vs. uniprot
Match: UPI001CF51B22 (glucose 1,6-bisphosphate synthase-like isoform X1 n=1 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF51B22) HSP 1 Score: 100 bits (250), Expect = 3.020e-24 Identity = 51/84 (60.71%), Postives = 65/84 (77.38%), Query Frame = 1
Query: 1 MIASTVSSKMLSAAAKVEGFTFEETLPGFKWMAHRGQELKAQGKTILFAYEEAIGFGPGDVVLEKDGLSSAALFAEMFVALRGR 252
MIASTVS+KML + A+ EGF F+ETL GFKWM + +L AQGKT+LF++EEAIGF G +VL+KDG+S+A + AEM LR R
Sbjct: 1 MIASTVSTKMLQSMAREEGFVFKETLTGFKWMGNLAFDLMAQGKTVLFSFEEAIGFMFGTMVLDKDGISAAVVMAEMASHLRSR 84
BLAST of mRNA_H-elongata_contig58327.13314.1 vs. uniprot
Match: A0A662WHP8_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WHP8_9STRA) HSP 1 Score: 103 bits (257), Expect = 9.970e-24 Identity = 51/81 (62.96%), Postives = 65/81 (80.25%), Query Frame = 1
Query: 1 MIASTVSSKMLSAAAKVEGFTFEETLPGFKWMAHRGQELKAQGKTILFAYEEAIGFGPGDVVLEKDGLSSAALFAEMFVAL 243
+IASTVSSKML A A+ EG FEETL GFKWM ++ EL+ GKT+LF++EEAIGF GD+V +KDG+++AA+FAEM V L
Sbjct: 375 LIASTVSSKMLRAVAQAEGLNFEETLTGFKWMGNKTFELREAGKTVLFSFEEAIGFCVGDIVKDKDGVAAAAVFAEMAVQL 455
BLAST of mRNA_H-elongata_contig58327.13314.1 vs. uniprot
Match: A0A8K1CRH0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CRH0_PYTOL) HSP 1 Score: 102 bits (255), Expect = 1.850e-23 Identity = 52/80 (65.00%), Postives = 64/80 (80.00%), Query Frame = 1
Query: 4 IASTVSSKMLSAAAKVEGFTFEETLPGFKWMAHRGQELKAQGKTILFAYEEAIGFGPGDVVLEKDGLSSAALFAEMFVAL 243
IASTVSSKML A A+VEG F ETL GFKWM ++ EL+ QGKT+LF++EEAIGF GD+V +KDG+ +AA+FAEM V L
Sbjct: 373 IASTVSSKMLRAVAEVEGLNFVETLTGFKWMGNKTAELRDQGKTVLFSFEEAIGFCVGDLVKDKDGVCAAAVFAEMAVQL 452
BLAST of mRNA_H-elongata_contig58327.13314.1 vs. uniprot
Match: UPI0003EC610F (glucose 1,6-bisphosphate synthase n=1 Tax=Neolamprologus brichardi TaxID=32507 RepID=UPI0003EC610F) HSP 1 Score: 99.4 bits (246), Expect = 2.160e-23 Identity = 49/84 (58.33%), Postives = 64/84 (76.19%), Query Frame = 1
Query: 1 MIASTVSSKMLSAAAKVEGFTFEETLPGFKWMAHRGQELKAQGKTILFAYEEAIGFGPGDVVLEKDGLSSAALFAEMFVALRGR 252
M+A+TVSSK+L A A+VEGF FEETLPGFKW+ +R EL G ++F++EE+IGF GD VL+KDG+SSAA+ AEM L +
Sbjct: 138 MLATTVSSKILQAFARVEGFHFEETLPGFKWVGNRIHELSQTGSRVIFSFEESIGFLCGDAVLDKDGVSSAAVVAEMAAYLHNK 221
BLAST of mRNA_H-elongata_contig58327.13314.1 vs. uniprot
Match: A0A6A4RGN8_SCOMX (Uncharacterized protein n=1 Tax=Scophthalmus maximus TaxID=52904 RepID=A0A6A4RGN8_SCOMX) HSP 1 Score: 98.6 bits (244), Expect = 2.270e-23 Identity = 50/84 (59.52%), Postives = 63/84 (75.00%), Query Frame = 1
Query: 1 MIASTVSSKMLSAAAKVEGFTFEETLPGFKWMAHRGQELKAQGKTILFAYEEAIGFGPGDVVLEKDGLSSAALFAEMFVALRGR 252
M+A+TVSSK+L A A VEGF FEETLPGFKW+ +R EL G T++FA+EE+IGF G +V EKDG+SSAA+ AEM L +
Sbjct: 136 MLATTVSSKILQAFAHVEGFHFEETLPGFKWIGNRMHELSKTGNTVIFAFEESIGFLCGSMVPEKDGVSSAAVVAEMAAYLHNK 219
BLAST of mRNA_H-elongata_contig58327.13314.1 vs. uniprot
Match: A0A6H5J982_9HYME (Uncharacterized protein n=2 Tax=Trichogramma TaxID=7490 RepID=A0A6H5J982_9HYME) HSP 1 Score: 102 bits (253), Expect = 3.340e-23 Identity = 54/91 (59.34%), Postives = 66/91 (72.53%), Query Frame = 1
Query: 1 MIASTVSSKMLSAAAKVEGFTFEETLPGFKWMAHRGQELKAQGKTILFAYEEAIGFGPGDVVLEKDGLSSAALFAEMFVALR--GRDSLDK 267
M+ASTVSSK+L++ +K EGF FEETL GFKWM +R ELK GKT+LFAYEEAIGF G VL+KDG+S+ AEM L+ G +DK
Sbjct: 338 MLASTVSSKILASMSKKEGFKFEETLTGFKWMGNRASELKKSGKTVLFAYEEAIGFMCGSSVLDKDGVSAGVCVAEMAAYLQTMGLSLIDK 428 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig58327.13314.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig58327.13314.1 >prot_H-elongata_contig58327.13314.1 ID=prot_H-elongata_contig58327.13314.1|Name=mRNA_H-elongata_contig58327.13314.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=97bp MIASTVSSKMLSAAAKVEGFTFEETLPGFKWMAHRGQELKAQGKTILFAYback to top mRNA from alignment at H-elongata_contig58327:809..3697- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig58327.13314.1 ID=mRNA_H-elongata_contig58327.13314.1|Name=mRNA_H-elongata_contig58327.13314.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2889bp|location=Sequence derived from alignment at H-elongata_contig58327:809..3697- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig58327:809..3697- >mRNA_H-elongata_contig58327.13314.1 ID=mRNA_H-elongata_contig58327.13314.1|Name=mRNA_H-elongata_contig58327.13314.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=582bp|location=Sequence derived from alignment at H-elongata_contig58327:809..3697- (Himanthalia elongata Himel1 dioecious)back to top |