mRNA_H-elongata_contig58195.13301.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig58195.13301.1 vs. uniprot
Match: D8LKK8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKK8_ECTSI) HSP 1 Score: 219 bits (558), Expect = 1.930e-70 Identity = 112/157 (71.34%), Postives = 128/157 (81.53%), Query Frame = 1
Query: 1 QVLKNAKGGVLVSEDDIKTAFDFFDAQGKGVITASMLRKRLGALNRPLSAGEARILMNKKMEVTLDDLREVLLENEVTNFDPVVEAFKVYDPEGTGYMDTEILRGIFANLGFGLMSDKDLNVLVDAADGDGDGRVSVEDFRGMCDSSKKIKNDSTRA 471
QV KNAKGG+LV E+++K AFDFFD +GKGVITA LRK+LGA +R LSA EAR+LMN K E+T+DDLREVLLENEVTNFDPV EAFK YDP TG+MDTEILR IF NLGFG MSD+DL +LV+AADGDGDGRV V DFR MC S K + +T A
Sbjct: 8 QVPKNAKGGILVCEEELKAAFDFFDVEGKGVITAGALRKKLGAFHRSLSAREARVLMNNKAEMTMDDLREVLLENEVTNFDPVAEAFKAYDPSETGFMDTEILRSIFDNLGFGKMSDEDLAILVEAADGDGDGRVGVSDFREMCGSVGKQEAMATNA 164
BLAST of mRNA_H-elongata_contig58195.13301.1 vs. uniprot
Match: A0A835ZDH5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDH5_9STRA) HSP 1 Score: 179 bits (455), Expect = 1.640e-54 Identity = 84/148 (56.76%), Postives = 121/148 (81.76%), Query Frame = 1
Query: 1 QVLKNAKGGVLVSEDDIKTAFDFFDAQGKGVITASMLRKRLGALNRPLSAGEARILMNKKMEVTLDDLREVLLENEVTNFDPVVEAFKVYDPEGTGYMDTEILRGIFANLGFGLMSDKDLNVLVDAADGDGDGRVSVEDFRGMCDSSK 444
+V KN+KGGVLV++++++ F+FFD G+GVIT++ +RKR+GA + ++ E + LMN K E+TL+DLRE+L++NEVT+FDPV EAFK YDP+GTGY+D E+LR IF+NLGFG +++ DL +LV+AAD DGDG++S+ DFR M D +K
Sbjct: 29 EVPKNSKGGVLVTDEELRAVFEFFDVDGRGVITSTCIRKRMGAFYKNMNPREYKFLMNNKSEMTLNDLRELLVDNEVTDFDPVAEAFKAYDPDGTGYVDVEVLRTIFSNLGFGDINNDDLAILVEAADVDGDGQISLNDFRRMTDFNK 176
BLAST of mRNA_H-elongata_contig58195.13301.1 vs. uniprot
Match: A0A8J2SJG6_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SJG6_9STRA) HSP 1 Score: 179 bits (453), Expect = 1.880e-54 Identity = 88/160 (55.00%), Postives = 119/160 (74.38%), Query Frame = 1
Query: 4 VLKNAKGGVLVSEDDIKTAFDFFDAQGKGVITASMLRKRLGALNRPLSAGEARILMNKKMEVTLDDLREVLLENEVTNFDPVVEAFKVYDPEGTGYMDTEILRGIFANLGFGLMSDKDLNVLVDAADGDGDGRVSVEDFRGMCDSSKKIKNDSTRAPGSE 483
V +N++GGVLV+++++K+AFDFFD +G G IT + L+KRLG + + E + LMN + E+TLDDLRE+LL+NEV NFDPV EAFKVYDPEGTG++DT +L+ IF NLGFG +S+ DL VL + D DGDGR+S+ DFR M D +K+ + AP E
Sbjct: 16 VPRNSRGGVLVTDEELKSAFDFFDVEGSGKITQAQLKKRLGVFYKDMPNKEYKFLMNDQSELTLDDLRELLLDNEVKNFDPVAEAFKVYDPEGTGFVDTSVLKAIFENLGFGEISEDDLAVLTETGDVDGDGRISLMDFRKMLDFNKEPDPVAAPAPADE 175
BLAST of mRNA_H-elongata_contig58195.13301.1 vs. uniprot
Match: F0YPY1_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YPY1_AURAN) HSP 1 Score: 173 bits (438), Expect = 1.140e-52 Identity = 84/142 (59.15%), Postives = 108/142 (76.06%), Query Frame = 1
Query: 4 VLKNAKGGVLVSEDDIKTAFDFFDAQGKGVITASMLRKRLGALNRPLSAGEARILMNKKMEVTLDDLREVLLENEVTNFDPVVEAFKVYDPEGTGYMDTEILRGIFANLGFGLMSDKDLNVLVDAADGDGDGRVSVEDFRGM 429
V +N+KGGVLV+E+++K AFDFFD G IT LRKRLG + + A E R LMN K E+TL+DL+E+LLENEV NFDPV EAFKVYDP+GTG++D+ +LR IF NLGFG ++D DL +L + D DGDG++S+ DFR M
Sbjct: 1 VPRNSKGGVLVTEEELKAAFDFFDVDSSGKITLGNLRKRLGVFYKNMPAKEYRFLMNNKSEMTLEDLKELLLENEVKNFDPVAEAFKVYDPDGTGFVDSNVLRSIFENLGFGEITDDDLTILTETGDVDGDGKISLMDFRKM 142
BLAST of mRNA_H-elongata_contig58195.13301.1 vs. uniprot
Match: A0A7S2S2D3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S2D3_9STRA) HSP 1 Score: 175 bits (443), Expect = 1.300e-52 Identity = 86/148 (58.11%), Postives = 113/148 (76.35%), Query Frame = 1
Query: 4 VLKNAKGGVLVSEDDIKTAFDFFDAQGKGVITASMLRKRLGALNRPLSAGEARILMNKKMEVTLDDLREVLLENEVTNFDPVVEAFKVYDPEGTGYMDTEILRGIFANLGFGLMSDKDLNVLVDAADGDGDGRVSVEDFRGMCDSSKK 447
V KNA GGVLV+E +++ AFDFFD G G ITAS L+KRL + + A E R LMN K ++LDDL+++LL+NEVTNFDPV EAFKVYDP+GTG++DTE+LR +F +LGFG +SD+DL VLV D D DG++S+ DFR M ++K+
Sbjct: 19 VPKNASGGVLVTEQELEAAFDFFDLDGTGTITASNLKKRLEVFYKDMPAKEYRFLMNNKAAMSLDDLKDLLLDNEVTNFDPVAEAFKVYDPQGTGFVDTEVLRTMFQDLGFGEVSDEDLQVLVQTGDADHDGKISLSDFRNMIHANKE 166
BLAST of mRNA_H-elongata_contig58195.13301.1 vs. uniprot
Match: A0A7S2C3J7_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C3J7_9STRA) HSP 1 Score: 174 bits (440), Expect = 7.430e-52 Identity = 85/147 (57.82%), Postives = 112/147 (76.19%), Query Frame = 1
Query: 4 VLKNAKGGVLVSEDDIKTAFDFFDAQGKGVITASMLRKRLGALNRPLSAGEARILMNKKMEVTLDDLREVLLENEVTNFDPVVEAFKVYDPEGTGYMDTEILRGIFANLGFGLMSDKDLNVLVDAADGDGDGRVSVEDFRGMCDSSK 444
V KN KGGVLV++D++ AF+FFD G G IT + LRKRLG + + A + R LMN K E+TL DLRE+LL+NEVTNFDPV EAFKVYDPEGTG++D ++LR +F NLGFG ++D+DL +LV+ D D DG++S+ DFR M D ++
Sbjct: 27 VPKNEKGGVLVTDDELAAAFEFFDMDGSGKITMTNLRKRLGVFYKNMPAKDYRFLMNNKPELTLQDLRELLLDNEVTNFDPVAEAFKVYDPEGTGFVDHKVLRDMFQNLGFGEVTDEDLQILVETGDVDQDGKISLSDFRNMLDFNR 173
BLAST of mRNA_H-elongata_contig58195.13301.1 vs. uniprot
Match: A0A6V1U3T1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1U3T1_HETAK) HSP 1 Score: 159 bits (402), Expect = 3.790e-46 Identity = 78/156 (50.00%), Postives = 110/156 (70.51%), Query Frame = 1
Query: 4 VLKNAKGGVLVSEDDIKTAFDFFDAQGKGVITASMLRKRLGALNRPLSAGEARILMNKKMEVTLDDLREVLLENEVTNFDPVVEAFKVYDPEGTGYMDTEILRGIFANLGFGLMSDKDLNVLVDAADGDGDGRVSVEDFRGMCDSSKKIKNDSTRA 471
+ +N+KGGVLV+E +IK AFDFFD +G IT LRKRLG + + E + LMN K E+TL+DL ++L++NEV +FDPV EAFK YDP+ G +D E+LR IF LGFG ++D+DL +L + AD + DGR+++EDFR M D +I+ ++ A
Sbjct: 27 IRRNSKGGVLVTEAEIKAAFDFFDIDNEGKITLQNLRKRLGVFYKNMPTKEYKFLMNNKNEMTLEDLTDLLMDNEVKDFDPVAEAFKAYDPDSNGVIDPEMLRHIFQGLGFGDITDEDLEILTETADVNKDGRITLEDFRDMIDEDLRIQREAEEA 182
BLAST of mRNA_H-elongata_contig58195.13301.1 vs. uniprot
Match: A0A485KGH9_9STRA (Aste57867_5213 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KGH9_9STRA) HSP 1 Score: 148 bits (373), Expect = 1.980e-42 Identity = 69/142 (48.59%), Postives = 104/142 (73.24%), Query Frame = 1
Query: 4 VLKNAKGGVLVSEDDIKTAFDFFDAQGKGVITASMLRKRLGALNRPLSAGEARILMNKKMEVTLDDLREVLLENEVTNFDPVVEAFKVYDPEGTGYMDTEILRGIFANLGFGLMSDKDLNVLVDAADGDGDGRVSVEDFRGM 429
VL+NAKGGVLV+++ I+ AFDFFD KG +T L+ RLG + ++ + RIL+N + E+T L ++LLEN++ ++DP+ EAF+ YDPEGTG++ ++L +F NLG+G +SD+DL VLV AD D DG+++++DFR M
Sbjct: 27 VLRNAKGGVLVTKEQIRAAFDFFDVDHKGSVTMENLKSRLGVFYKDMTTRDYRILLNNESELTEQALCDLLLENDIADYDPIAEAFRAYDPEGTGFVSFDVLSRLFENLGYGKLSDEDLRVLVATADADKDGKLNLDDFRHM 168
BLAST of mRNA_H-elongata_contig58195.13301.1 vs. uniprot
Match: A0A7S3D8C7_9EUKA (Hypothetical protein n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3D8C7_9EUKA) HSP 1 Score: 148 bits (374), Expect = 2.690e-42 Identity = 76/150 (50.67%), Postives = 106/150 (70.67%), Query Frame = 1
Query: 4 VLKNAKGGVLVSEDDIKTAFDFFDAQGKGVITASMLRKRLGALNRPLSAGEARILMNKKMEVTLDDLREVLLENEVTNFDPVVEAFKVYDPEGTGYMDTEILRGIFANLGFGLMSDKDLNVLVDAADGDGDGRVSVEDFRGMCDSSKKIK 453
V +N GGV V E++++ AF+FFD QGKG I + LR RLG + L A E R L+++ E L L +L NE+TNFDPV EAFKVYDP TGY+D + LR IF+NLGFG +S D+++L+ AD DGDG++S+EDFRGM + +++++
Sbjct: 24 VRRNEYGGVYVDEEELRAAFNFFDTQGKGHIVPADLRSRLGIFYKTLPAREYRFLISEP-EFNLKTLTRLLENNEITNFDPVREAFKVYDPHDTGYIDVDTLRHIFSNLGFGELSPDDVDILIKTADVDGDGKISLEDFRGMFEYNRQLE 172
BLAST of mRNA_H-elongata_contig58195.13301.1 vs. uniprot
Match: W4FTS4_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FTS4_9STRA) HSP 1 Score: 147 bits (370), Expect = 5.310e-42 Identity = 69/141 (48.94%), Postives = 102/141 (72.34%), Query Frame = 1
Query: 1 QVLKNAKGGVLVSEDDIKTAFDFFDAQGKGVITASMLRKRLGALNRPLSAGEARILMNKKMEVTLDDLREVLLENEVTNFDPVVEAFKVYDPEGTGYMDTEILRGIFANLGFGLMSDKDLNVLVDAADGDGDGRVSVEDFR 423
QVL+N GGVLV++D I+ AFDFFD + GV+T L+ RLG + +S + R+L+N + E+T L ++LLEN++ ++DPV EAF+ YDPEGTG+++ E+L +F +LG+G +SD DL VLV AD D DG++++ DFR
Sbjct: 25 QVLRNENGGVLVTKDQIRAAFDFFDVEHNGVVTMDNLKSRLGVFYKDMSTRDYRVLLNNESELTEQTLCDLLLENDIADYDPVAEAFRAYDPEGTGFVNLEVLSRLFESLGYGKLSDDDLRVLVATADSDKDGQLNLADFR 165 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig58195.13301.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig58195.13301.1 >prot_H-elongata_contig58195.13301.1 ID=prot_H-elongata_contig58195.13301.1|Name=mRNA_H-elongata_contig58195.13301.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=165bp QVLKNAKGGVLVSEDDIKTAFDFFDAQGKGVITASMLRKRLGALNRPLSAback to top mRNA from alignment at H-elongata_contig58195:933..2627- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig58195.13301.1 ID=mRNA_H-elongata_contig58195.13301.1|Name=mRNA_H-elongata_contig58195.13301.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1695bp|location=Sequence derived from alignment at H-elongata_contig58195:933..2627- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig58195:933..2627- >mRNA_H-elongata_contig58195.13301.1 ID=mRNA_H-elongata_contig58195.13301.1|Name=mRNA_H-elongata_contig58195.13301.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=990bp|location=Sequence derived from alignment at H-elongata_contig58195:933..2627- (Himanthalia elongata Himel1 dioecious)back to top |