mRNA_H-elongata_contig580.13272.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig580.13272.1
Unique NamemRNA_H-elongata_contig580.13272.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig580.13272.1 vs. uniprot
Match: D8LFL1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFL1_ECTSI)

HSP 1 Score: 213 bits (541), Expect = 2.610e-59
Identity = 100/139 (71.94%), Postives = 121/139 (87.05%), Query Frame = 1
Query:  247 DVILSDEKPCILKVGEAMLAGEIEYRKGNFEKAFERLREAVRLDRELLYDEPWGWLVPAEHALGALLLEQERVEEATNVFRSNLEMYKNNMWALLGLYQCLEKAGDPKAVDVKKRFNEASSEADVKLQATCFCARAAGA 663
            ++I+SDE PC+ KVGEAMLAGEIEYRKGNFE AFE LREAVRLD  LLYDEPWGW+VP+ HALGALLLEQ+ ++EAT VFR++L+MY +NMW LLGL QCL+KAGDP+AV+ K+R++EASS A+ K  ATCFCA+ AGA
Sbjct:  380 NLIVSDEAPCLFKVGEAMLAGEIEYRKGNFETAFEHLREAVRLDTSLLYDEPWGWMVPSRHALGALLLEQDHIQEATEVFRADLKMYPSNMWGLLGLSQCLDKAGDPEAVEAKRRYDEASSTAESKPAATCFCAKVAGA 518          
BLAST of mRNA_H-elongata_contig580.13272.1 vs. uniprot
Match: A0A7Y2CJ48_9BACT (Tetratricopeptide repeat protein n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A7Y2CJ48_9BACT)

HSP 1 Score: 142 bits (359), Expect = 2.070e-33
Identity = 71/124 (57.26%), Postives = 89/124 (71.77%), Query Frame = 1
Query:  277 ILKVGEAMLAGEIEYRKGNFEKAFERLREAVRLDRELLYDEPWGWLVPAEHALGALLLEQERVEEATNVFRSNLEMYKNNMWALLGLYQCLEKAGDPKAVD-VKKRFNEASSEADVKLQATCFC 645
            IL V EAMLAGE+EYR+GN + AF  LREAVR D  L YDEPWGW+ PA HALGALLLEQ RVEEA  VFR++L  +  N WAL GL +CL ++G     D V+ +   A+  ADV+++A+C+C
Sbjct:  420 ILLVAEAMLAGEVEYRRGNLDAAFRHLREAVRRDDALNYDEPWGWMQPARHALGALLLEQGRVEEAGEVFRADLRRHPKNAWALHGLEECLRRSGKESDADSVRAQLGAATVRADVRIKASCYC 543          
BLAST of mRNA_H-elongata_contig580.13272.1 vs. uniprot
Match: A0A7X5VN10_9BACT (Uncharacterized protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A7X5VN10_9BACT)

HSP 1 Score: 137 bits (344), Expect = 8.290e-33
Identity = 68/124 (54.84%), Postives = 87/124 (70.16%), Query Frame = 1
Query:  277 ILKVGEAMLAGEIEYRKGNFEKAFERLREAVRLDRELLYDEPWGWLVPAEHALGALLLEQERVEEATNVFRSNLEMYKNNMWALLGLYQCLEKAGDPKAVDVKK-RFNEASSEADVKLQATCFC 645
            IL+V  A+LAGE+EYRKGN+E AFE LR AV+LD +L YDEPWGW+ PA H LGALL EQ+R EEA +V+ +NL  Y  N WAL GL + L   G  +  D  + RF EA ++ADV +  +C+C
Sbjct:  208 ILRVASAVLAGEVEYRKGNYETAFEHLRFAVQLDEQLNYDEPWGWMEPARHPLGALLTEQKRYEEAVSVYEANLARYPENGWALHGLAESLRGLGRTEEADAAQARFQEAWNDADVVIPGSCYC 331          
BLAST of mRNA_H-elongata_contig580.13272.1 vs. uniprot
Match: UPI00190FA794 (tetratricopeptide repeat protein n=1 Tax=Roseiconus lacunae TaxID=2605694 RepID=UPI00190FA794)

HSP 1 Score: 139 bits (349), Expect = 4.700e-32
Identity = 66/133 (49.62%), Postives = 95/133 (71.43%), Query Frame = 1
Query:  250 VILSDEKPCILKVGEAMLAGEIEYRKGNFEKAFERLREAVRLDRELLYDEPWGWLVPAEHALGALLLEQERVEEATNVFRSNLEMYKNNMWALLGLYQCLEKAG-DPKAVDVKKRFNEASSEADVKLQATCFC 645
            V+ ++    IL+V EAM+AGEI YRKGNF++AF +LR AV+LD  + YDEPWGW+ PA HALGALL+EQ   E+A  VFR++L+ +  N W+L GL +CL + G + +A  ++ +F  A+ +ADV +  +CFC
Sbjct:  414 VLFNNRSRDILEVAEAMVAGEIAYRKGNFDEAFRQLRNAVKLDDAMNYDEPWGWMQPARHALGALLIEQRHYEQAEQVFRADLKKHPRNPWSLNGLAECLMELGRNDEATTIRNQFLSAAKQADVTIDRSCFC 546          
BLAST of mRNA_H-elongata_contig580.13272.1 vs. uniprot
Match: UPI000B25CA76 (hypothetical protein n=1 Tax=Marinifilum fragile TaxID=570161 RepID=UPI000B25CA76)

HSP 1 Score: 137 bits (346), Expect = 1.610e-31
Identity = 68/133 (51.13%), Postives = 96/133 (72.18%), Query Frame = 1
Query:  250 VILSDEKPCILKVGEAMLAGEIEYRKGNFEKAFERLREAVRLDRELLYDEPWGWLVPAEHALGALLLEQERVEEATNVFRSNLEMYKNNMWALLGLYQCLEKAG-DPKAVDVKKRFNEASSEADVKLQATCFC 645
            ++ ++    IL V   M+AGEI YRKG++E +FE+LR+AV+LD  L YDEPWGW+ PA HALGALL+EQER EEA +V+R++L+ +  N+WAL GL + LEK G + +A     +F  AS+ ADVK+  +C+C
Sbjct:  441 ILFNNTSRDILGVANKMMAGEIAYRKGDYEFSFEQLRQAVQLDDALNYDEPWGWMQPARHALGALLMEQERFEEAESVYRNDLKRHPKNLWALHGLTESLEKQGKEEEAKKYHSQFEIASARADVKVDRSCYC 573          
BLAST of mRNA_H-elongata_contig580.13272.1 vs. uniprot
Match: UPI001E33D27B (tetratricopeptide repeat protein n=1 Tax=Stieleria sp. JC731 TaxID=2894195 RepID=UPI001E33D27B)

HSP 1 Score: 137 bits (344), Expect = 2.230e-31
Identity = 67/133 (50.38%), Postives = 92/133 (69.17%), Query Frame = 1
Query:  250 VILSDEKPCILKVGEAMLAGEIEYRKGNFEKAFERLREAVRLDRELLYDEPWGWLVPAEHALGALLLEQERVEEATNVFRSNLEMYKNNMWALLGLYQCLEKAGD-PKAVDVKKRFNEASSEADVKLQATCFC 645
            ++ +++   IL V EAM+AGEI YR+GNFE AF  LR AV+LD  + YDEPWGW+ PA HALGALLLEQ   E+A  VFR++L+ +  N W+L GL +CL + G   +A  ++K+F  A+  ADV +  +CFC
Sbjct:  414 ILFNNKSRDILGVAEAMVAGEIAYRRGNFETAFRHLRNAVKLDDAMNYDEPWGWMQPARHALGALLLEQRHYEQADPVFRADLKRHPKNPWSLNGLAECLMEMGKIDEAATIRKQFISATEHADVTIDRSCFC 546          
BLAST of mRNA_H-elongata_contig580.13272.1 vs. uniprot
Match: A0A7S3YYF3_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3YYF3_9EUKA)

HSP 1 Score: 137 bits (345), Expect = 2.660e-31
Identity = 70/141 (49.65%), Postives = 95/141 (67.38%), Query Frame = 1
Query:  277 ILKVGEAMLAGEIEYRKGNFEKAFERLREAVRLDRELLYDEPWGWLVPAEHALGALLLEQERVEEATNVFRSNLEMYKNNMWALLGLYQCLEKAGDPKAV--DVKKRFNEASSEADVKLQATCFCARAAGAKTTSAMANKE 693
            IL VGE +L GEI YR+G F++AFE LREAV  D  L YDEPWGW+ P  HALGALLLE +R +EA +VF ++LE + NN+WAL GL +     G+ K V  + ++R +EAS+ ADV + A C CA    A+++   A ++
Sbjct:  414 ILNVGEKLLRGEILYREGKFDQAFEALREAVAADDGLNYDEPWGWMQPTRHALGALLLESKRFQEAKHVFEADLEKWPNNLWALKGLAEIARVTGESKEVFEEFRRRADEASARADVSIGAACLCANGVKAESSGGDAAEK 554          
BLAST of mRNA_H-elongata_contig580.13272.1 vs. uniprot
Match: A0A7S2XHI4_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2XHI4_9EUKA)

HSP 1 Score: 129 bits (323), Expect = 3.230e-31
Identity = 67/134 (50.00%), Postives = 89/134 (66.42%), Query Frame = 1
Query:  253 ILSDEKPC-ILKVGEAMLAGEIEYRKGNFEKAFERLREAVRLDRELLYDEPWGWLVPAEHALGALLLEQERVEEATNVFRSNLEMYKNNMWALLGLYQCLEKAGD-PKAVDVKKRFNEASSEADVKLQATCFCA 648
            +   E  C IL V + ML+GEI+YR G++EKAF+ L EAVR D  L YDEPWGW+ PA HALGALL EQ+R + A  VF ++L  +  N+W+L+GL +C E  G+  +A  V +RF  AS   DV ++A C CA
Sbjct:   13 VFDPEGTCGILNVAQKMLSGEIKYRSGDYEKAFQDLEEAVRRDDALPYDEPWGWMQPARHALGALLAEQKRYKVAREVFLTDLRKWPENLWSLMGLRRCEEALGNNEEAKKVHERFKVASKRLDVPMEAPCACA 146          
BLAST of mRNA_H-elongata_contig580.13272.1 vs. uniprot
Match: A0A3D4NUR4_PSESP (Uncharacterized protein (Fragment) n=1 Tax=Pseudomonas sp. TaxID=306 RepID=A0A3D4NUR4_PSESP)

HSP 1 Score: 126 bits (317), Expect = 3.490e-31
Identity = 65/130 (50.00%), Postives = 88/130 (67.69%), Query Frame = 1
Query:  286 VGEAMLAGEIEYRKGNFEKAFERLREAVRLDRELLYDEPWGWLVPAEHALGALLLEQERVEEATNVFRSNLEM---------YKNNMWALLGLYQCLEKAG-DPKAVDVKKRFNEASSEADVKLQATCFC 645
            V  AML GEIEYRKGN++ AF  LR+A+ LD  L YDEPWGW+ P  HALGALLLEQ RVEEA   +R++L +         + +N+W+L G  +CL++ G D +A  V+ R + A + ADV++ A+CFC
Sbjct:    1 VAGAMLRGEIEYRKGNYDSAFAHLRQALSLDDNLPYDEPWGWMQPVRHALGALLLEQGRVEEALQAYRADLGLDNTLSRAAWHLDNVWSLHGYVECLKRLGRDAEAAAVQTRLDLAMARADVEITASCFC 130          
BLAST of mRNA_H-elongata_contig580.13272.1 vs. uniprot
Match: A0A255R918_9BACT (Uncharacterized protein n=2 Tax=Rhodopirellula sp. MGV TaxID=2023130 RepID=A0A255R918_9BACT)

HSP 1 Score: 135 bits (341), Expect = 5.120e-31
Identity = 66/133 (49.62%), Postives = 92/133 (69.17%), Query Frame = 1
Query:  250 VILSDEKPCILKVGEAMLAGEIEYRKGNFEKAFERLREAVRLDRELLYDEPWGWLVPAEHALGALLLEQERVEEATNVFRSNLEMYKNNMWALLGLYQCLEKAGD-PKAVDVKKRFNEASSEADVKLQATCFC 645
            ++ +++   IL V EAM+AGEI YRKGNFE AF+ LR AV+LD  + YDEPWGW+ PA HALGALL+EQ   E+A  VFR++L+ +  N W+L GL +CL + G   +A  ++ +F  A+  ADV +  +CFC
Sbjct:  404 ILFNNKSRDILGVAEAMVAGEIAYRKGNFEMAFQHLRNAVKLDDAMNYDEPWGWMQPARHALGALLIEQRHFEQAEPVFRADLKRHPKNPWSLNGLAECLMELGKLDEAATIRMQFLSAAERADVTIDRSCFC 536          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig580.13272.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFL1_ECTSI2.610e-5971.94Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7Y2CJ48_9BACT2.070e-3357.26Tetratricopeptide repeat protein n=1 Tax=Gemmatimo... [more]
A0A7X5VN10_9BACT8.290e-3354.84Uncharacterized protein n=1 Tax=Acidobacteria bact... [more]
UPI00190FA7944.700e-3249.62tetratricopeptide repeat protein n=1 Tax=Roseiconu... [more]
UPI000B25CA761.610e-3151.13hypothetical protein n=1 Tax=Marinifilum fragile T... [more]
UPI001E33D27B2.230e-3150.38tetratricopeptide repeat protein n=1 Tax=Stieleria... [more]
A0A7S3YYF3_9EUKA2.660e-3149.65Hypothetical protein n=1 Tax=Lotharella globosa Ta... [more]
A0A7S2XHI4_9EUKA3.230e-3150.00Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]
A0A3D4NUR4_PSESP3.490e-3150.00Uncharacterized protein (Fragment) n=1 Tax=Pseudom... [more]
A0A255R918_9BACT5.120e-3149.62Uncharacterized protein n=2 Tax=Rhodopirellula sp.... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig580contigH-elongata_contig580:2..2315 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score189.5
Seed ortholog evalue1e-45
Seed eggNOG ortholog2880.D8LFL1
EggNOG free text desc.tpr domain protein
EggNOG OGs28MP5@1,2QU74@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons4
Model size1428
Cds size411
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig580.13272.1prot_H-elongata_contig580.13272.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig580 722..2018 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930940.6165364-UTR-H-elongata_contig580:1..7211622930940.6165364-UTR-H-elongata_contig580:1..721Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig580 2..721 -
1691679633.4366477-UTR-H-elongata_contig580:1..7211691679633.4366477-UTR-H-elongata_contig580:1..721Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig580 2..721 -
1622930940.6941726-UTR-H-elongata_contig580:2018..23151622930940.6941726-UTR-H-elongata_contig580:2018..2315Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig580 2019..2315 -
1691679633.4779716-UTR-H-elongata_contig580:2018..23151691679633.4779716-UTR-H-elongata_contig580:2018..2315Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig580 2019..2315 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930940.6294222-CDS-H-elongata_contig580:721..8591622930940.6294222-CDS-H-elongata_contig580:721..859Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig580 722..859 -
1691679633.445889-CDS-H-elongata_contig580:721..8591691679633.445889-CDS-H-elongata_contig580:721..859Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig580 722..859 -
1622930940.6412344-CDS-H-elongata_contig580:1060..11421622930940.6412344-CDS-H-elongata_contig580:1060..1142Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig580 1061..1142 -
1691679633.4540558-CDS-H-elongata_contig580:1060..11421691679633.4540558-CDS-H-elongata_contig580:1060..1142Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig580 1061..1142 -
1622930940.6570714-CDS-H-elongata_contig580:1454..15711622930940.6570714-CDS-H-elongata_contig580:1454..1571Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig580 1455..1571 -
1691679633.4621117-CDS-H-elongata_contig580:1454..15711691679633.4621117-CDS-H-elongata_contig580:1454..1571Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig580 1455..1571 -
1622930940.6780624-CDS-H-elongata_contig580:1944..20181622930940.6780624-CDS-H-elongata_contig580:1944..2018Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig580 1945..2018 -
1691679633.4701047-CDS-H-elongata_contig580:1944..20181691679633.4701047-CDS-H-elongata_contig580:1944..2018Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig580 1945..2018 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig580.13272.1

>prot_H-elongata_contig580.13272.1 ID=prot_H-elongata_contig580.13272.1|Name=mRNA_H-elongata_contig580.13272.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=137bp
MLAGEIEYRKGNFEKAFERLREAVRLDRELLYDEPWGWLVPAEHALGALL
LEQERVEEATNVFRSNLEMYKNNMWALLGLYQCLEKAGDPKAVDVKKRFN
EASSEADVKLQATCFCARAAGAKTTSAMANKEVCCG*
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mRNA from alignment at H-elongata_contig580:2..2315-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig580.13272.1 ID=mRNA_H-elongata_contig580.13272.1|Name=mRNA_H-elongata_contig580.13272.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2314bp|location=Sequence derived from alignment at H-elongata_contig580:2..2315- (Himanthalia elongata Himel1 dioecious)
CTCGCCTTCAAAAGAAATGCTGCTTTCCGCTGTGAATAATTTTCCGGGCA TCGGTTCTCATGCAAGCCTTGAAGGCCCAATCTCCGATTGCGATTGAAGC TTTACGGTGTCATTATTCGGCCTTGGAAGCGTATATCATGTCGTTTAAGG AGCGACTTCGGATCTTCAAGCACCGAATATTGTATATTTACACCTGCCCC TCTTGCTCCATGGAATTCGCCGCTACTCACCATAACACATGCCCCAGACG TGATTCTATCGGATGAAAAGCCGTGCATACTGAAGGTTGGCGAGGCCATG CTCGCCGGTGAAATTGAGTACCGGAAGGGCAACTTCGAGAAGGCCTTCGA GCGTCTCCGTGAGGCCGTGCGGTAAGTTAGATGGGAAAAGACCCCTTTCG ATCGTTCGAGTGGACAACGTCAATCACGTGGTTGGTTTGCGCCCTTCGGT CATAATCGCTGGTAATACTCTTCAGTCAGAATCACTCCAGTTTGGCAATA TGTTTTGTCGCATGGTGTAGACAAACTATTGAGGGATAGTGGCTGGACAG AGATAGTCTGCCTAGTCGTAGGAAACTCCTAGTCTGCCATATTTCATCGG CAAATATCTCAGTCGTTTTCATGCAAGAATGGTCTCTTTAGGTCTGCACT GGTAATAGCACTTCAGGTGGCCTCGAAAGCTACTCTAGAGGGTCGAAGAG GTATCACATTTTGTTGCTGTGCCGTTGTATGTGGTATGATGTAGGCTGGA CCGGGAGCTTCTGTATGACGAACCTTGGGGCTGGTTGGTGCCGGCGGAGC ATGCCCTCGGAGCCCTCTTGCTCGAGCAGGAACGCGTCGAAGAGGCTACT AACGTTTTCAGGCGAGGCGATGAACATTTTGGTCTCGCTCTTGCACACCT GGAAAACGCTCCCTTTGCGTTTTTACGCCTCGCTCTGCCCTTTGGCCTAC CTTCATATGTAATGATATGGAGCGTTCATTGTTCGGTAATGATGTGCCGT CCGCGTTTGAAAACGTTTTAGACAAGAGCTTGGCTCTATTAATCGGATCA TTTCATGCCTTCGGCATATTTAACTCAACCACTTCAGCGGTCGAGGCCTG GCGAAGTCGAGTTTTTCTTTAGCGTTCTTTGGCGTATTTCCTCCTATCGG CTGGCTTGTTTGTGGCGGCACAGGTCTAACCTCGAGATGTACAAGAACAA CATGTGGGCTCTCCTCGGGCTGTACCAGTGCCTGGAGAAAGCTGGCGATC CGAAGGCGCGAAAACTCCACTCTAGAAACAAAACGAGGCATAGTTCATAT CGTCCATACCTTTCCTCCCCTTTCTTAATGTCCAGTGCAATAAAATACGT CAATTATCGCAAAGGTACCTCTCACACCCTTCGCGATTTTACTTTGTCCT AGCCGCTGTTCATTATTGTTCGTCATTGCTTTGGCTTGCTTTGATCCGAC TGAAAGGCTGTCGATGTGAAGAAGCGTTTCAATGAAGCATCTTCTGAGGC CGACGTGAAGCTCCAGGCGACATGCTTCTGCGCCAGGGCTGCTGGGGCCA AAACTACCTCGGCCATGGCGAACAAGGAAGTGTGTTGCGGGTGATCATAA TCGATTGGCGAATAATTTTTTATATTGTATTAAGTAAAGACGAGTAATAT GTGGGAGTCCCTGCCGTTTATTTTGTAGGAGTCGCTGAGCAGGCGCGACC ACCAGAAGTGTAGCTGCCGGCCAGGTGCTTCGGCATCCCGCATGCATGCG TTCATCCTAAGTTAGCTGTGCCGATCCTGAGCGTTTAATCACCGTCTTTC TTTCGCTTTTTTGGATATGCCGGTCTCTTGTCTTTCATAAGATGACCCTA GGGCTCTTGGGATGTCACCAGGTAAAACGGCTCTAATAATGGCATGTCCC CGATCTGGACTGCTGTATGCTTGTAAAAGCTCGGGTCTGGTGGGTGAGAA GCAATGTAGTAGAAAATTTAGCGGCATGTAGGAAACGGTGTACCCTGGGG CTCTCGTGGCACAGTTCTCCGAGGGTTCCTTGATTGTCATTGTTTTTACC ACCACATCTTTTCAAAAGATCTATGTTGAAAATACCAGATCCACTGGACA GGAATATATACCTCTAATACTTTTTTCTACTCTACATTGATATCTTACCG GCACATTGTGAATATCTAGCTTGCAATCGTACAACTTCTAACCCCCCCCG TCCCCCTCCCCCTTCCGGAGTAAGCAATTACCTGGTTGTTAGATTGAATG TCGTATGGTACGCTGGTAGTATTTTTGCCTTTGAACACTGTTGTTGTTGG TCGCACTTTTAGCA
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Coding sequence (CDS) from alignment at H-elongata_contig580:2..2315-

>mRNA_H-elongata_contig580.13272.1 ID=mRNA_H-elongata_contig580.13272.1|Name=mRNA_H-elongata_contig580.13272.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=822bp|location=Sequence derived from alignment at H-elongata_contig580:2..2315- (Himanthalia elongata Himel1 dioecious)
ATGCTCGCCGGTGAAATTGAGTACCGGAAGGGCAACTTCGAGAAGGCCTT
CGAGCGTCTCCGTGAGGCCGTGCGATGCTCGCCGGTGAAATTGAGTACCG
GAAGGGCAACTTCGAGAAGGCCTTCGAGCGTCTCCGTGAGGCCGTGCGGC
TGGACCGGGAGCTTCTGTATGACGAACCTTGGGGCTGGTTGGTGCCGGCG
GAGCATGCCCTCGGAGCCCTCTTGCTCGAGCAGGAACGCGTCGAAGAGGC
TACTAACGTTTTCAGGCTGGACCGGGAGCTTCTGTATGACGAACCTTGGG
GCTGGTTGGTGCCGGCGGAGCATGCCCTCGGAGCCCTCTTGCTCGAGCAG
GAACGCGTCGAAGAGGCTACTAACGTTTTCAGGTCTAACCTCGAGATGTA
CAAGAACAACATGTGGGCTCTCCTCGGGCTGTACCAGTGCCTGGAGAAAG
CTGGCGATCCGAAGGTCTAACCTCGAGATGTACAAGAACAACATGTGGGC
TCTCCTCGGGCTGTACCAGTGCCTGGAGAAAGCTGGCGATCCGAAGGCTG
TCGATGTGAAGAAGCGTTTCAATGAAGCATCTTCTGAGGCCGACGTGAAG
CTCCAGGCGACATGCTTCTGCGCCAGGGCTGCTGGGGCCAAAACTACCTC
GGCCATGGCGAACAAGGAAGTGTGTTGCGGGTGAGCTGTCGATGTGAAGA
AGCGTTTCAATGAAGCATCTTCTGAGGCCGACGTGAAGCTCCAGGCGACA
TGCTTCTGCGCCAGGGCTGCTGGGGCCAAAACTACCTCGGCCATGGCGAA
CAAGGAAGTGTGTTGCGGGTGA
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