mRNA_H-elongata_contig57528.13224.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig57528.13224.1
Unique NamemRNA_H-elongata_contig57528.13224.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig57528.13224.1 vs. uniprot
Match: A0A177U1E5_9BASI (Integrase catalytic domain-containing protein n=2 Tax=Tilletia TaxID=13289 RepID=A0A177U1E5_9BASI)

HSP 1 Score: 133 bits (335), Expect = 1.540e-29
Identity = 75/244 (30.74%), Postives = 132/244 (54.10%), Query Frame = 1
Query:   10 EPAIMGEAQASSEWPQLKRTIAREMDGQIARGVWQVVERPKGKTVLGARVVFKRKFDKDERVEKYKCRLVAQGFRQVKGIHYDESSSPTPAQASITIVPSMIGALGWEARQLDVDIAYPEADVEE-IYVELPEAYRDS----RKQVGQLKKAMYGLVHAGLLWSKTFGIELEAKGFQRYQADPCVFPRILHGVVVVVIVVNIDDLLVASATKRDEEQAVRDLCSCFPIKDWRRLRITWDATSRG 726
            EPA   EA+  S+W +  + +  +MD  +    W +V+ P G+  +G+R V+K K D++ + +++K RLVAQGF QV G+ Y E+ +P     S+ ++ ++    GW   Q+DV  AY   D+EE +Y+  P  Y       +  V +L+  +YGL  +G  W+  F  +L A+G+ + +++PCV+ R   G + + ++  +DD+L+ + T+ +              K+W  LR T+D T  G
Sbjct:  731 EPATYAEARRRSDWEKWNKAMDEQMDALVGMHTWDLVQLPPGRKAIGSRWVYKLKLDEEGKADRWKARLVAQGFTQVAGVDYFETFAPVARLDSLRVILALAAHFGWVIHQVDVVTAYLNGDLEEEVYIRQPPGYEKGGSRRKNMVCKLRLPLYGLKQSGRQWNTKFHDKLIARGYTQCKSEPCVYVRRKGGSISIALI-YVDDVLIVAPTEAEVNVE----------KEW--LRATFDVTDGG 961          
BLAST of mRNA_H-elongata_contig57528.13224.1 vs. uniprot
Match: A0A0C3AKI0_9AGAM (Uncharacterized protein (Fragment) n=1 Tax=Serendipita vermifera MAFF 305830 TaxID=933852 RepID=A0A0C3AKI0_9AGAM)

HSP 1 Score: 132 bits (331), Expect = 5.210e-29
Identity = 72/225 (32.00%), Postives = 123/225 (54.67%), Query Frame = 1
Query:   13 PAIMGEAQASSEWPQLKRTIAREMDGQIARGVWQVVERPKGKTVLGARVVFKRKFDKDERVEKYKCRLVAQGFRQVKGIHYDESSSPTPAQASITIVPSMIGALGWEARQLDVDIAYPEADVEE-IYVELPEAYRDSRKQVGQLKKAMYGLVHAGLLWSKTFGIELEAKGFQRYQADPCVFPRILHGVVVVVIVVNIDDLLVASATKRDEEQAVRDLCSCFPIKD 684
            P  + +A+ S EW   +  +  E    +  G W++ E  + + ++G+R VF +K+D+  +V +YK RLVAQGF Q+ G+ Y ++ SP     ++    ++     WE RQ+D+  AY   ++EE I++E PE + D   +V +LK  +YGL  AG +W+K    +L   GF R  ADPCV+     G + + + V +DD+++   ++   +  V  L   F +KD
Sbjct:  855 PKTLKQARESPEWRNWQSAMEEEYGQLMQMGTWELDEPDEERKLVGSRWVFAKKYDEHGKVNQYKARLVAQGFSQIPGVDYTDNYSPVVRLDAVRACIALSAIKDWEMRQIDIKGAYLNGELEEEIFMEQPEGFNDGSGRVCRLKLPLYGLKQAGRMWNKKLNAQLTTLGFNRTNADPCVYYNNQDGKITI-LTVWVDDIILCGDSESRIDTTVSALKKIFEVKD 1078          
BLAST of mRNA_H-elongata_contig57528.13224.1 vs. uniprot
Match: A0A177TL22_9BASI (Integrase catalytic domain-containing protein n=1 Tax=Tilletia indica TaxID=43049 RepID=A0A177TL22_9BASI)

HSP 1 Score: 130 bits (328), Expect = 1.170e-28
Identity = 77/243 (31.69%), Postives = 133/243 (54.73%), Query Frame = 1
Query:   10 EPAIMGEAQASSEWPQLKRTIAREMDGQIARGVWQVVERPKGKTVLGARVVFKRKFDKDERVEKYKCRLVAQGFRQVKGIHYDESSSPTPAQASITIVPSMIGALGWEARQLDVDIAYPEADVEE-IYVELPEAYRD---SRKQVGQLKKAMYGLVHAGLLWSKTFGIELEAKGFQRYQADPCVFPRILHGVVVVVIVVNIDDLLVASATKRDEEQAVRDLCSCFPIKDWRRLRITWDATSRG 726
            EPA   EA+   +W +  + +  +M+  +    W +VE P G+  +G+R V+K K ++D   +++K RLVAQGF QV G+ Y E+ +P     S+ ++ ++    GW   Q+DV  AY   D+EE +Y+  P  Y     +R  V +L+  +YGL  +G  W+  F  +L  +G+ + +++PCV+ R + G + + ++  +DD+L+ + T  + E AV         KDW  L+ T+D T  G
Sbjct:  632 EPATYWEARKRRDWDKWSKAMDEQMNALVGMHTWDLVELPAGRKAIGSRWVYKLKLNEDGMADRWKARLVAQGFTQVAGVDYFETFAPVARLDSLRVILALAAHFGWVIHQVDVVTAYLNGDLEEEVYIRQPPGYEKKGPNRNLVCRLRLPLYGLKQSGRQWNTKFHKQLIKRGYVQCKSEPCVYVRRIGGSIRIALI-YVDDVLIVAPT--EAEVAVE--------KDW--LKATFDVTDGG 861          
BLAST of mRNA_H-elongata_contig57528.13224.1 vs. uniprot
Match: A0A0C2WN23_AMAMK (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Amanita muscaria (strain Koide BX008) TaxID=946122 RepID=A0A0C2WN23_AMAMK)

HSP 1 Score: 127 bits (319), Expect = 1.820e-27
Identity = 81/218 (37.16%), Postives = 124/218 (56.88%), Query Frame = 1
Query:   40 SSEWPQLKRTIAREMDGQIARGVWQVVERPKGKTVLGARVVFKRKFDKDERVEKYKCRLVAQGFRQVKGIHYDESSSPTPAQASITIVPSMIGALGWEARQLDVDIAYPEADVEE-IYVELPEAYRDSRKQVGQLKKAMYGLVHAGLLWSKTFGIELEAKGFQRYQADPCVFPRIL--HGVVVVVIVVNIDDLLVASATKRDEEQAVRDLCSCFPIKD 684
            ++EW   ++    E++     GV++ V RP+ + ++G++ VFK K   D +VEKYK RLVAQGF QV+GI Y+E+ +P     SI ++ ++     WE  Q+DV  A+   ++EE IY+++P  ++ S   V +LKKA+YGL  A   W K    EL+  GF R QAD CVF + +  H  +   I V +DD +V S +     +   DL S F + D
Sbjct: 1007 AAEW---RKACEAELEMFKQLGVFEEVPRPRDRKIIGSKWVFKTKTGPDGQVEKYKARLVAQGFSQVEGIDYNETFAPVTKSNSIRLLLALAARHDWEIHQMDVKSAFLNGELEEEIYMKVPPGHKASADAVWRLKKALYGLKQASREWYKKLSAELKTLGFTRLQADHCVFYKNMDRHPPI---IAVYVDDNMVLSDSLDLVTKTKSDLGSRFDMTD 1218          
BLAST of mRNA_H-elongata_contig57528.13224.1 vs. uniprot
Match: A0A7D9HXK4_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9HXK4_PARCT)

HSP 1 Score: 126 bits (317), Expect = 2.810e-27
Identity = 73/212 (34.43%), Postives = 126/212 (59.43%), Query Frame = 1
Query:   10 EPAIMGEA---QASSEWPQLKRTIAREMDGQIARGVWQVVERPKGKTVLGARVVFKRKFDKDERVEKYKCRLVAQGFRQVKGIHYDESSSPTPAQASITIVPSMIGALGWEARQLDVDIAYPEADVEEIYVELPEAY--RDSRKQVGQLKKAMYGLVHAGLLWSKTFGIELEAKGFQRYQADPCVFPRIL---HGVVVVVIVVNIDDLLVAS 621
            EP  M EA   + S+EW   K+    E +  I    W++V  PKGK V+G++ VFK K D++  V++YK RLVAQG+ Q +G+ Y E  SP     +I  + ++  A  WE  Q+DV  A+ + ++EEIY+  P+ Y  ++    V +LKK++YGL  +   W+      L++ G+++ ++DPC++ + +   +GV+++ I  ++DD+L+ S
Sbjct:  722 EPINMDEAFSGEHSAEW---KQATDSEYNSLIENETWELVSLPKGKNVVGSKWVFKVKRDENGCVQRYKARLVAQGYTQAEGVDYSEVFSPVVRNTTIRSLLALSNAKNWEVHQMDVKTAFLQGNLEEIYMRQPDGYVNKELPNHVCKLKKSIYGLKQSARCWNNAIDTFLKSSGYKQMESDPCLYMKSIRDQNGVIILSI--HVDDILLFS 928          
BLAST of mRNA_H-elongata_contig57528.13224.1 vs. uniprot
Match: A0A177U0N4_9BASI (Integrase catalytic domain-containing protein n=2 Tax=Tilletia TaxID=13289 RepID=A0A177U0N4_9BASI)

HSP 1 Score: 126 bits (317), Expect = 2.970e-27
Identity = 71/234 (30.34%), Postives = 127/234 (54.27%), Query Frame = 1
Query:   10 EPAIMGEAQASSEWPQLKRTIAREMDGQIARGVWQVVERPKGKTVLGARVVFKRKFDKDERVEKYKCRLVAQGFRQVKGIHYDESSSPTPAQASITIVPSMIGALGWEARQLDVDIAYPEADVEE-IYVELPEAYRD---SRKQVGQLKKAMYGLVHAGLLWSKTFGIELEAKGFQRYQADPCVFPRILHGVVVVVIVVNIDDLLVASATKRDEEQAVRDLCSCFPIKDWRRLR 699
            EPA   EA+   +W +    +  +M+  +    W +VE P G+  +G+R V+K K ++D   +++K RLVAQGF QV G+ Y E+ +P     S+ ++ ++    GW   Q+DV  AY   D+EE +Y+  P  Y     ++  V +L+  +YGL  +G  W+  F  +L  +G+ + +++PCV+ R   G + + ++  +DD+L+ + T+ +     + L S F + D   LR
Sbjct:  633 EPATYWEAKRRRDWDKWSTAMDEQMNALVGMHTWDLVELPAGRKAIGSRWVYKLKLNEDGMADRWKARLVAQGFTQVAGVDYFETFAPVARLDSLRVILALAAHFGWVIHQVDVVTAYLNGDLEEEVYIRQPPGYEKGGPNKNLVCRLRLPLYGLKQSGRQWNTKFHKQLVKRGYVQCKSEPCVYVRRTGGSIRIALI-YVDDVLIVAPTEAEVAIEKKWLKSTFDVTDGGPLR 865          
BLAST of mRNA_H-elongata_contig57528.13224.1 vs. uniprot
Match: A0A5C3E5T1_9BASI (Uncharacterized protein n=2 Tax=Ustilago trichophora TaxID=86804 RepID=A0A5C3E5T1_9BASI)

HSP 1 Score: 125 bits (313), Expect = 1.020e-26
Identity = 78/244 (31.97%), Postives = 132/244 (54.10%), Query Frame = 1
Query:    4 DPEPAIMGEAQASSEWPQLKRTIAREMDGQIARGVWQVVERPKGKTVLGARVVFKRKFDKDERVEKYKCRLVAQGFRQVKGIHYDESSSPTPAQASITIVPSMIGALGWEARQLDVDIAYPEADVEE-IYVELPEAYRDSRKQVGQLKKAMYGLVHAGLLWSKTFGIELEAKGFQRYQADPCVFPRILHGVVVVVIVVNIDDLLVASATKRDEEQAVRDLCSCFPIKDWRRL------RITWDA 714
            D EP  + EA+   +WP  +  I +E+      G W + + P G+  +G++ VFK K   D  V+KYK RLVAQGF Q  G+ YDE+ +P    A++ ++ ++    GW A Q+DV  AY   ++EE IY+  P  Y +  K V +L KA+YGL  AG  W       L+ +G++R ++D  ++ R +  V   +I + +DD+++ +  +R   +  + L + F + D   L      ++TW++
Sbjct:  827 DQEPKTIEEAKRRPDWPHWETAIKKELASLSENGTWTLEDLPPGRRAVGSKWVFKIKLKADGTVDKYKARLVAQGFTQQHGVDYDETFAPVLKFATLRLLIALAAQEGWLAHQMDVITAYLNGNLEEEIYMRAPPGYAEGDK-VCRLCKALYGLKQAGRTWYIKIDKWLKDQGYERIESDHGLYVRPI--VQDTIIALYVDDVIILTKDERKLTEIKQALSTAFKMTDGGVLSSILGMQVTWES 1067          
BLAST of mRNA_H-elongata_contig57528.13224.1 vs. uniprot
Match: A0A6H5JTV6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTV6_9PHAE)

HSP 1 Score: 124 bits (312), Expect = 1.230e-26
Identity = 72/230 (31.30%), Postives = 130/230 (56.52%), Query Frame = 1
Query:    1 LDPEPAIMGEAQASSEWPQLKRTIAREMDGQIARGVWQVVE-RPKGKTVLGARVVFKRKFDKDERVEKYKCRLVAQGFRQVKGIHYDESSSPTPAQASITIVPSMIGALGWEARQLDVDIAYPEADV-EEIYVELPEAYRDSRKQVGQLKKAMYGLVHAGLLWSKTFGIELEAKGFQRYQADPCVFPRILHGVVVVVIVVNIDDLLVASATKRDEEQAVRDLCSCFPIKD 684
            ++P P  +     S    +L++ +  E +G +  G +  V+  P+G+  + ++  F  K +K+ +++ +K RLVA+GF Q+  + Y  SSSP P+ ASI ++ ++    G      DV  AY  A + EE++++LP    D   ++ + ++A+YGL  +G  W       L   GF++ +ADPCVF +++  VVV++IV+ +DD+LVA + + D E+ +  L   FP K+
Sbjct:  533 VEPPPMTVAGVAKSVYRERLEQAMREEFEGHLGTGTFSFVDGAPEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKN 761          
BLAST of mRNA_H-elongata_contig57528.13224.1 vs. uniprot
Match: A0A438HUL4_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Vitis vinifera TaxID=29760 RepID=A0A438HUL4_VITVI)

HSP 1 Score: 123 bits (308), Expect = 1.270e-26
Identity = 74/231 (32.03%), Postives = 128/231 (55.41%), Query Frame = 1
Query:    1 LDPEPAIMGEAQASSEWPQLKRTIAREMDGQIARGVWQVVERPKGKTVLGARVVFKRKFDKDERVEKYKCRLVAQGFRQVKGIHYDESSSPTPAQASITIVPSMIGALGWEARQLDVDIAYPEADVEE-IYVELPEAYR--DSRKQVGQLKKAMYGLVHAGLLWSKTFGIELEAKGFQRYQADPCVFPRILHGVVVVVIVVNIDDLLVASATKRDEEQAVRDLCSCFPIKD 684
            L+ +P  + + + SS   +  + +  EM      GVW +VE PKG   +G + +FK K D    + +YK RLVA+GF Q +GI Y E+ SP  ++ S  I+ +++     E  Q+DV  A+   +++E IY+  PE +   DS++ V +LK+++YGL  A   W + F   + + GF+    D C++ +   G   +++V+ +DD+L+AS+      + +R L S F +KD
Sbjct:    3 LEDDPISLSQVKQSSNSEKWIKAMKDEMKSMKDNGVWDLVELPKGVKPIGCKWIFKTKRDSKGNIVRYKARLVAKGFTQKEGIDYKETFSPVSSKDSFRIIMALVAHYDLELHQMDVKTAFLNGNIDETIYMVQPENFESNDSKQLVCRLKRSIYGLKQASRQWYRKFDQVITSFGFKENTVDQCIYLK-FSGSKFIILVLYVDDILLASSDVGLLHETMRFLSSKFDMKD 232          
BLAST of mRNA_H-elongata_contig57528.13224.1 vs. uniprot
Match: A0A438GNV2_VITVI (Retrovirus-related Pol polyprotein from transposon RE1 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438GNV2_VITVI)

HSP 1 Score: 122 bits (306), Expect = 3.450e-26
Identity = 77/235 (32.77%), Postives = 130/235 (55.32%), Query Frame = 1
Query:    1 LDPEPAIMGEAQASSEWPQLKRTIAREMDGQIARGVWQVVERPKGKTVLGARVVFKRKFDKDERVEKYKCRLVAQGFRQVKGIHYDESSSPTPAQASITIVPSMIGALGWEARQLDVDIAYPEADVEE-IYVELPEAYRDSRK-QVGQLKKAMYGLVHAGLLWSKTFGIELEAKGFQRYQADPCVFPRILHGVVVVVIVVNIDDLLVASATKRDEEQAVRDLCSCFPIKDWRRLR 699
            ++ EP    EA   + W   +  +A+E++       W+VV+ P  K  +G + ++K K++ D  +E+YK RLVAQGF Q++GI Y E+ SP     S+    ++  A  WE  Q+DV+ A+   D+EE +Y++LPE ++ + K +V +L+K++YGL  A   W       L+  GFQ+  AD  +F     G +V+ ++V +DDL++A    +  E     L   F IK+  +L+
Sbjct:   80 IEKEPRTYKEAVTDNRW---REAMAKEIEALETNQTWKVVDLPPEKKAIGCKWIYKIKYNADGSIERYKARLVAQGFTQIEGIDYQETFSPVAKMTSVRCFLAIAVAKRWELHQMDVNNAFLHGDLEEEVYMKLPEGFKATGKNKVCKLQKSLYGLKQASRQWFAKLMTALKEYGFQQSLADYSLFTY-RRGNIVMNLLVYVDDLILAGNDNKVCEAFKNFLDRKFGIKNLGQLK 310          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig57528.13224.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A177U1E5_9BASI1.540e-2930.74Integrase catalytic domain-containing protein n=2 ... [more]
A0A0C3AKI0_9AGAM5.210e-2932.00Uncharacterized protein (Fragment) n=1 Tax=Serendi... [more]
A0A177TL22_9BASI1.170e-2831.69Integrase catalytic domain-containing protein n=1 ... [more]
A0A0C2WN23_AMAMK1.820e-2737.16Integrase catalytic domain-containing protein (Fra... [more]
A0A7D9HXK4_PARCT2.810e-2734.43Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A177U0N4_9BASI2.970e-2730.34Integrase catalytic domain-containing protein n=2 ... [more]
A0A5C3E5T1_9BASI1.020e-2631.97Uncharacterized protein n=2 Tax=Ustilago trichopho... [more]
A0A6H5JTV6_9PHAE1.230e-2631.30Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A438HUL4_VITVI1.270e-2632.03Retrovirus-related Pol polyprotein from transposon... [more]
A0A438GNV2_VITVI3.450e-2632.77Retrovirus-related Pol polyprotein from transposon... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig57528contigH-elongata_contig57528:7..1441 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score127.5
Seed ortholog evalue8.5e-27
Seed eggNOG ortholog3750.XP_008359393.1
EggNOG free text desc.cysteine-rich RLK (RECEPTOR-like protein kinase) 8
EggNOG OGs37RIF@33090,3G9AM@35493,COG2801@1,KOG0017@2759
COG Functional cat.K
Best tax levelStreptophyta
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons1
Model size1435
Cds size726
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig57528.13224.1prot_H-elongata_contig57528.13224.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig57528 695..1420 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930934.8000224-UTR-H-elongata_contig57528:6..6941622930934.8000224-UTR-H-elongata_contig57528:6..694Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig57528 7..694 -
1691679631.150932-UTR-H-elongata_contig57528:6..6941691679631.150932-UTR-H-elongata_contig57528:6..694Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig57528 7..694 -
1622930934.8694308-UTR-H-elongata_contig57528:1420..14411622930934.8694308-UTR-H-elongata_contig57528:1420..1441Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig57528 1421..1441 -
1691679631.175843-UTR-H-elongata_contig57528:1420..14411691679631.175843-UTR-H-elongata_contig57528:1420..1441Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig57528 1421..1441 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930934.8530297-CDS-H-elongata_contig57528:694..14201622930934.8530297-CDS-H-elongata_contig57528:694..1420Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig57528 695..1420 -
1691679631.1627288-CDS-H-elongata_contig57528:694..14201691679631.1627288-CDS-H-elongata_contig57528:694..1420Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig57528 695..1420 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig57528.13224.1

>prot_H-elongata_contig57528.13224.1 ID=prot_H-elongata_contig57528.13224.1|Name=mRNA_H-elongata_contig57528.13224.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=242bp
MGEAQASSEWPQLKRTIAREMDGQIARGVWQVVERPKGKTVLGARVVFKR
KFDKDERVEKYKCRLVAQGFRQVKGIHYDESSSPTPAQASITIVPSMIGA
LGWEARQLDVDIAYPEADVEEIYVELPEAYRDSRKQVGQLKKAMYGLVHA
GLLWSKTFGIELEAKGFQRYQADPCVFPRILHGVVVVVIVVNIDDLLVAS
ATKRDEEQAVRDLCSCFPIKDWRRLRITWDATSRGTGTLGH*
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mRNA from alignment at H-elongata_contig57528:7..1441-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig57528.13224.1 ID=mRNA_H-elongata_contig57528.13224.1|Name=mRNA_H-elongata_contig57528.13224.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1435bp|location=Sequence derived from alignment at H-elongata_contig57528:7..1441- (Himanthalia elongata Himel1 dioecious)
TTAGACCCAGAGCCGGCAATCATGGGCGAGGCGCAAGCGTCGTCGGAGTG GCCGCAATTGAAAAGGACGATCGCGCGCGAGATGGATGGGCAAATTGCTC GAGGCGTGTGGCAGGTGGTGGAGCGCCCAAAAGGGAAGACGGTGTTGGGC GCGAGAGTAGTTTTCAAGCGAAAATTCGACAAGGATGAAAGGGTCGAAAA GTATAAATGTCGTCTCGTGGCGCAGGGTTTCAGGCAGGTCAAAGGCATAC ACTACGATGAATCCTCCTCTCCGACTCCTGCGCAGGCCAGTATTACGATA GTACCCAGCATGATCGGGGCGCTCGGCTGGGAGGCGCGGCAGCTGGACGT CGACATAGCCTACCCGGAGGCCGATGTGGAGGAGATTTACGTTGAGCTCC CGGAGGCATACCGTGACTCCAGGAAGCAAGTCGGCCAACTAAAGAAGGCA ATGTACGGACTTGTCCACGCCGGGCTGCTGTGGTCAAAAACGTTTGGGAT CGAGCTCGAGGCGAAGGGTTTCCAGAGATATCAAGCCGACCCATGCGTGT TCCCGCGGATTCTCCACGGGGTAGTGGTAGTCGTCATTGTGGTCAACATC GACGACCTGCTGGTTGCTAGTGCGACGAAACGTGACGAGGAGCAAGCGGT GAGGGACCTGTGCTCCTGTTTTCCCATTAAGGACTGGAGGAGGCTTCGTA TTACCTGGGATGCAACATCACGCGGGACTGGAACGCTGGGACACTGACGT TCGACCAGCATCAGTACATACAGACTATGGCGGAACGTTTTGGCGTGACG AAGACCAGCATCATCCCGTCCGTGGCAGGAGGAAAAGCCCTTTCGAAACC AGACAGGCCGCAAACGGACGCAGAGGTTGAAGAAATGCGCCAGATTCCTT GCCGAGAAATCGTTGGGGCCCTAATGTGGGCAGCGACGATGATCAGGCCC AACATTTCATTCCCTGGGCACCAACTGGTGAAATTCAACGACAACCCGGG ACCGACACACTGGAGGGCAGTCCAGAAAGCGCTGCAATATTTATGGCGCA CTCGGGACCTCGGGATCACCTACGGAGGGGAACCGGGGGGAGAGACCAAG TTATTAGCGTGGGTCGACGCAGACTACGGCACCTGCCCGGACACGCGTCG CTCAGTGTCGAGGGGGGGGCGGTGATGATGGCTGGCGGGGCCATTGGTTG GTTCTCACGAGTGCAAAAGGTAACGGCGGCGGCGTCGTCCGAACCGGAAT ACGTCGCGCTGGCTGAGATGGTAAACGAGTTGCGTTTCCTACGACAGGTC AAGGAGTTCATGACCCCCCCAATCGACTTCGCCATCAAGATACACGAGGA CAACGAAGGCGCAATCAAGATGGCGAAAAACCGCTTCAGCAGTCGACGAA CGAGGCACGTGGACATCGAGCATCACATTGTCCGC
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Coding sequence (CDS) from alignment at H-elongata_contig57528:7..1441-

>mRNA_H-elongata_contig57528.13224.1 ID=mRNA_H-elongata_contig57528.13224.1|Name=mRNA_H-elongata_contig57528.13224.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1452bp|location=Sequence derived from alignment at H-elongata_contig57528:7..1441- (Himanthalia elongata Himel1 dioecious)
ATGGGCGAGGCGCAAGCGTCGTCGGAGTGGCCGCAATTGAAAAGGACGAT
CGCGCGCGAGATGGATGGGCAAATTGCTCGAGGCGTGTGGCAGGTGGTGG
AGCGCCCAAAAGGGAAGACGGTGTTGGGCGCGAGAGTAGTTTTCAAGCGA
AAATTCGACAAGGATGAAAGGGTCGAAAAGTATAAATGTCGTCTCGTGGC
GCAGGGTTTCAGGCAGGTCAAAGGCATACACTACGATGAATCCTCCTCTC
CGACTCCTGCGCAGGCCAGTATTACGATAGTACCCAGCATGATCGGGGCG
CTCGGCTGGGAGGCGCGGCAGCTGGACGTCGACATAGCCTACCCGGAGGC
CGATGTGGAGGAGATTTACGTTGAGCTCCCGGAGGCATACCGTGACTCCA
GGAAGCAAGTCGGCCAACTAAAGAAGGCAATGTACGGACTTGTCCACGCC
GGGCTGCTGTGGTCAAAAACGTTTGGGATCGAGCTCGAGGCGAAGGGTTT
CCAGAGATATCAAGCCGACCCATGCGTGTTCCCGCGGATTCTCCACGGGG
TAGTGGTAGTCGTCATTGTGGTCAACATCGACGACCTGCTGGTTGCTAGT
GCGACGAAACGTGACGAGGAGCAAGCGGTGAGGGACCTGTGCTCCTGTTT
TCCCATTAAGGACTGGAGGAGGCTTCGTATTACCTGGGATGCAACATCAC
GCGGGACTGGAACGCTGGGACACTGAATGGGCGAGGCGCAAGCGTCGTCG
GAGTGGCCGCAATTGAAAAGGACGATCGCGCGCGAGATGGATGGGCAAAT
TGCTCGAGGCGTGTGGCAGGTGGTGGAGCGCCCAAAAGGGAAGACGGTGT
TGGGCGCGAGAGTAGTTTTCAAGCGAAAATTCGACAAGGATGAAAGGGTC
GAAAAGTATAAATGTCGTCTCGTGGCGCAGGGTTTCAGGCAGGTCAAAGG
CATACACTACGATGAATCCTCCTCTCCGACTCCTGCGCAGGCCAGTATTA
CGATAGTACCCAGCATGATCGGGGCGCTCGGCTGGGAGGCGCGGCAGCTG
GACGTCGACATAGCCTACCCGGAGGCCGATGTGGAGGAGATTTACGTTGA
GCTCCCGGAGGCATACCGTGACTCCAGGAAGCAAGTCGGCCAACTAAAGA
AGGCAATGTACGGACTTGTCCACGCCGGGCTGCTGTGGTCAAAAACGTTT
GGGATCGAGCTCGAGGCGAAGGGTTTCCAGAGATATCAAGCCGACCCATG
CGTGTTCCCGCGGATTCTCCACGGGGTAGTGGTAGTCGTCATTGTGGTCA
ACATCGACGACCTGCTGGTTGCTAGTGCGACGAAACGTGACGAGGAGCAA
GCGGTGAGGGACCTGTGCTCCTGTTTTCCCATTAAGGACTGGAGGAGGCT
TCGTATTACCTGGGATGCAACATCACGCGGGACTGGAACGCTGGGACACT
GA
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