mRNA_H-elongata_contig5749.13218.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig5749.13218.1
Unique NamemRNA_H-elongata_contig5749.13218.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig5749.13218.1 vs. uniprot
Match: D7G4S1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4S1_ECTSI)

HSP 1 Score: 323 bits (828), Expect = 3.540e-106
Identity = 180/328 (54.88%), Postives = 235/328 (71.65%), Query Frame = 1 
Query:   25 SVAGWLFLGIRVGAFFLSGVQPNMPFSLSRRASVWCSGCPRVVLTKRTSWAAA------DCHHLHMLAEND-VESPVDDVNEKRQYALDTLIEQFTSPENGNLTAAVDKYLDFCDHAFLTHLRGRIASAGAESTWGIALRLVEEGINMAMQRRLAAADTNLRRVLDLAPDIKAMEGKIRTLFREGEVDMAFIVTINMNLQGAKEANGAENAVKLLTHLTMFMMDVQDEQVNPELKLLRSLLRTECDRVRKSMLQEHLQITHYDIFVEKPLDTNKVQPKQLRAAIQDMIAEVGELGQAADARLTVFLRGLQVEIDDVIKSSERPGPYRE 987
            +  GWL    +  AF + G Q   P + + R     S  P    T+R   AAA          +HMLA  D V+S V   +E+    LD LI+QFTSP++GN+TA V++YLD CDHA LTHLRGRI +  A+S    AL+ VEE INMAMQRRLAAAD+NLR+VLDLAPDIK MEG+IRTLFREG+V+MAF+V I+MNLQ AK+A GA++AV LLTHLT F+M +QDE++NPE KLLR+LLRT+CD VRKS+LQ+ LQ+ + D+F+E+P D +KVQP  L+ AI DMI +V ++GQA D  +T  L+GLQVE++ V+  S+RPGPY++
Sbjct:   10 ATVGWLLARRQAEAFSVVGFQK--PQATACRTRALASSVPASSPTQRILDAAALRGPSRGLLPMHMLAGGDAVQSSVGTKSEEHS-VLDALIDQFTSPKSGNVTATVEEYLDLCDHALLTHLRGRIEAEEAQSPEATALKHVEEEINMAMQRRLAAADSNLRQVLDLAPDIKKMEGRIRTLFREGKVNMAFMVMISMNLQRAKDAEGADHAVMLLTHLTTFIMMIQDERLNPEEKLLRTLLRTDCDGVRKSILQDRLQLPNNDVFLERPPDKDKVQPHLLQQAITDMITQVEDIGQAIDVGMTDSLKGLQVEVNTVVAGSKRPGPYKQ 334
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BLAST of mRNA_H-elongata_contig5749.13218.1 vs. uniprot
Match: A0A835YR16_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR16_9STRA)

HSP 1 Score: 159 bits (401), Expect = 1.630e-43
Identity = 98/211 (46.45%), Postives = 130/211 (61.61%), Query Frame = 1 
Query:  343 CDHAFLTHLRGRIASAGAESTWGIALRLVEEGINMAMQRRLAAADTNLRRVLDLAPDIKAMEGKIRTLFREGEVDMAFIVTINMNLQGAKEAN-GAENAVKLLTHLTMFMMDVQDEQVNPELKLLRSLLRTECD---RVRKSMLQEHLQITHYDIFVEKPLDTNKVQPKQLRAAI---QDMIAEVGELGQAADARLTVFLRGLQVEIDDVI 954
            CD+ FL +L GRI  AG +S  G  L  V + IN+AMQRRL AAD NLR VL  APD+K ME  +R LFR G+ DMAF+V +NMNL  A+EA  GAE AV +LTHL   +M++QD +V PE++LLR L+R   D     R+ +L+E L ++         L    V P QLR AI   Q+   ++ ++ +  D  LT  LRGL  EID+V+
Sbjct:    2 CDYGFLMYLNGRIGEAGPDSEEGTKLSAVAQEINVAMQRRLVAADANLRAVLANAPDLKKMEADLRRLFRTGQADMAFMVVLNMNLAQAREAGPGAEGAVAVLTHLNTAIMEMQDTRVAPEVRLLRMLMRASDDDNAEKRRDLLKEQLDLSGGGGADSSGL----VTPDQLRDAIRELQEQATQIEKVSKEYDTGLTEKLRGLLREIDEVL 208
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BLAST of mRNA_H-elongata_contig5749.13218.1 vs. uniprot
Match: A0A2V3IXN8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXN8_9FLOR)

HSP 1 Score: 86.7 bits (213), Expect = 4.040e-15
Identity = 72/221 (32.58%), Postives = 115/221 (52.04%), Query Frame = 1 
Query:  244 NEKRQYALDTLIEQFTSPENGN----LTAAVDKYLDFCDHAFLTHLRGRIASAGAESTWGIALRLVEEGINMAMQRRLAAADTNLRRVLDLAPDIKAMEGKIRTLFREGEVDMAFIVTINMNLQGAKEANGAENAVKLLTHLTMFMMDVQDEQVNPELKLLRSLLRTECDRVRKSMLQEHLQITHYDIFVEKPLDTN-KVQPKQLRAAIQDMIAEVGELGQ 891
            NE    + D LI++  S  + +    L  AV+      D   L  +  RI+  G++S   I LR V   I++ M  R+ A   ++R VL  A D  AM  +I TL R+G++D AFI+ +  NL  AK+AN A+ AV++L+        V+D Q+ PE++L+R+LLRTE    R  ML +  +       V+  + +   V  K+  AA++ +I E G + +
Sbjct:  150 NEIAAASYDELIDEIKSARDVSNPAALKTAVEASYQRIDLRLLERINERISFKGSDSEALIDLRNV---ISVVMNERIQAGTESVRTVL-AAGDAIAMRKQIDTLARKGKLDDAFILLLQANLDQAKKAN-AQQAVEVLSLALNHAQSVKDVQLEPEVRLIRALLRTEDSEARTKMLMDSFKSRGSVTLVDGTVTSGIAVDGKKFVAALRKLIEEFGNVDE 365
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BLAST of mRNA_H-elongata_contig5749.13218.1 vs. uniprot
Match: A0A7S1EQS5_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1EQS5_9RHOD)

HSP 1 Score: 80.9 bits (198), Expect = 1.460e-13
Identity = 63/193 (32.64%), Postives = 103/193 (53.37%), Query Frame = 1 
Query:  382 ASAGAESTWGIALRLVEEGINMAMQRRLAAADTNLRRVLDLAPDIKAMEGKIRTLFREGEVDMAFIVTINMNLQGAKEANGAENAVKLLTHLTMFMMDVQDEQVNPELKLLRSLLRTECDRVRKSMLQEHLQITHYDIFVEKPLDTNK-VQPKQLRAAIQDMIAEVGELGQAADARLTVFLRGLQVEIDDVIK 957
            AS+G E+        + E +  AM  R+ +A   LR  L   P   AM  K+    + GE+D AF++ +  NL  AK+A   +NAVK+LT L    M+++D+QV PE+ L+R LLRTE +  RKS+L++ L +    +  +    +   V  K+L AA++ +I + G +    D+ L   +  +  E +DV +
Sbjct:   70 ASSGDETA-----EKISEIVQKAMADRMQSAADRLRVCLTAGPP-DAMVQKLYDFVQAGELDDAFLLLLAGNLDQAKKAQN-DNAVKILTILQRKTMELRDQQVEPEVALVRQLLRTETEDARKSILRKALAVKKKVMLSDGSQSSGTTVDGKKLVAAMRKLIEQFGNV----DSTLVERVSMIGTEAEDVAR 251
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BLAST of mRNA_H-elongata_contig5749.13218.1 vs. uniprot
Match: A0A7S1XEX3_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XEX3_9RHOD)

HSP 1 Score: 77.0 bits (188), Expect = 6.040e-12
Identity = 60/165 (36.36%), Postives = 91/165 (55.15%), Query Frame = 1 
Query:  274 LIEQFTSPENGNLTAAVDKYLDFCDHAFLTHLRGRI-ASAGAESTWGIALRLVEEGINMAMQRRLAAADTNLRRVLDL-APDIKAMEGKIRTLFREGEVDMAFIVTINMNLQGAKEANGAENAVKLLTHLTMFMMDVQDEQVNPELKLLRSLLRTECDRVRKSML 762
            L+ +     +G + +AV +     D AFL HL G +  ++G E T    L  V+  I   M  ++  A + +R +L   AP+  AM+ K+   FR GEVD AF++ +  N+  A++A GAE AV +LT L M  M++ D    PEL L+R LLRT+    RK++L
Sbjct:  136 LLREIVQARDG-VESAVSRLYGRVDQAFLEHLEGALEGTSGEERT---KLEQVKAEILRRMNEKMEKAASVMRSILQAGAPE--AMDTKLVEHFRFGEVDDAFLLLLEGNIDQARKA-GAEPAVAVLTKLRMKAMELGDTNAEPELVLVRKLLRTDEAAARKALL 293
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BLAST of mRNA_H-elongata_contig5749.13218.1 vs. uniprot
Match: A0A7R9UVW9_DIALT (Hypothetical protein n=3 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9UVW9_DIALT)

HSP 1 Score: 61.2 bits (147), Expect = 7.750e-7
Identity = 62/255 (24.31%), Postives = 124/255 (48.63%), Query Frame = 1 
Query:  232 VDDVNEKRQYALDTLIEQFTSPENGNLTAA--VDKYLDFCDHAFLTHLRGRIASAGAESTWGIALRLVEEGINMAMQRRLAAADTNLRRVLDLAPDIKAMEGKIRTLFREGEVDMAFIVTINMNLQGAKEANGAENAVKLLTHL-TMFMMDVQDEQVNPELKLLRSLLRTECDRVRKSMLQEHLQITHYDIFV-----EKPLDTNK--VQPKQLRAAIQDMIAEVGELGQAADARLTVFLRGLQVEIDDVIKSSE 966
            +D+  ++R Y  + L+E     ++ N++ A  V    +  D+ F+  L  ++ +A  E     +L  V+E +N  M  R+  A   L+++L   P    M   +    + G ++ + ++ +  N++ A EA GA+ A +L++ L T   +++ D+ V PE++LLR LLR E    R+ +L++ +   +    +     E P  + +  V+ ++L AA+  + A+ G + +           GL   ID + K +E
Sbjct:   42 LDEAAKERGY--NALLEMMLRADSFNISQADMVKASYEKIDYTFMQKLGAQVEAAEGEGK--DSLVRVQELVNKEMSERMGRAAEALKKLLGAGPS--GMFRLVPDYMQRGLLEESLLLLLEANIRQASEA-GAKPAAELMSRLMTQIRLEI-DKAVEPEIRLLRELLRIESADARRELLRQKIAPKNVPAILIAGAREAPPASKEPDVKVRKLAAALGKLKAQFGNVDEELQG-------GLGARIDMIAKEAE 281
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5749.13218.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7G4S1_ECTSI3.540e-10654.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YR16_9STRA1.630e-4346.45Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A2V3IXN8_9FLOR4.040e-1532.58Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A7S1EQS5_9RHOD1.460e-1332.64Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A7S1XEX3_9RHOD6.040e-1236.36Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7R9UVW9_DIALT7.750e-724.31Hypothetical protein n=3 Tax=Diacronema lutheri Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig5749contigH-elongata_contig5749:2569..7617 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score78.6
Seed ortholog evalue6.5e-12
Seed eggNOG ortholog2880.D7FSF0
EggNOG OGs2AUPK@1,2RZUJ@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-20_000600.1
Exons7
Model size1048
Cds size1038
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930934.0915856-UTR-H-elongata_contig5749:2568..25711622930934.0915856-UTR-H-elongata_contig5749:2568..2571Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig5749 2569..2571 +
1691679630.8160307-UTR-H-elongata_contig5749:2568..25711691679630.8160307-UTR-H-elongata_contig5749:2568..2571Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig5749 2569..2571 +
1622930934.2186668-UTR-H-elongata_contig5749:7610..76171622930934.2186668-UTR-H-elongata_contig5749:7610..7617Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig5749 7611..7617 +
1691679630.898794-UTR-H-elongata_contig5749:7610..76171691679630.898794-UTR-H-elongata_contig5749:7610..7617Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig5749 7611..7617 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930934.1075215-CDS-H-elongata_contig5749:2571..29761622930934.1075215-CDS-H-elongata_contig5749:2571..2976Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5749 2572..2976 +
1691679630.8268125-CDS-H-elongata_contig5749:2571..29761691679630.8268125-CDS-H-elongata_contig5749:2571..2976Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5749 2572..2976 +
1622930934.1244245-CDS-H-elongata_contig5749:5706..58021622930934.1244245-CDS-H-elongata_contig5749:5706..5802Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5749 5707..5802 +
1691679630.8362374-CDS-H-elongata_contig5749:5706..58021691679630.8362374-CDS-H-elongata_contig5749:5706..5802Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5749 5707..5802 +
1622930934.1406958-CDS-H-elongata_contig5749:6153..62551622930934.1406958-CDS-H-elongata_contig5749:6153..6255Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5749 6154..6255 +
1691679630.8455734-CDS-H-elongata_contig5749:6153..62551691679630.8455734-CDS-H-elongata_contig5749:6153..6255Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5749 6154..6255 +
1622930934.159188-CDS-H-elongata_contig5749:6442..65261622930934.159188-CDS-H-elongata_contig5749:6442..6526Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5749 6443..6526 +
1691679630.85525-CDS-H-elongata_contig5749:6442..65261691679630.85525-CDS-H-elongata_contig5749:6442..6526Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5749 6443..6526 +
1622930934.1726356-CDS-H-elongata_contig5749:6913..70241622930934.1726356-CDS-H-elongata_contig5749:6913..7024Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5749 6914..7024 +
1691679630.8645666-CDS-H-elongata_contig5749:6913..70241691679630.8645666-CDS-H-elongata_contig5749:6913..7024Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5749 6914..7024 +
1622930934.1874692-CDS-H-elongata_contig5749:7181..72711622930934.1874692-CDS-H-elongata_contig5749:7181..7271Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5749 7182..7271 +
1691679630.8741496-CDS-H-elongata_contig5749:7181..72711691679630.8741496-CDS-H-elongata_contig5749:7181..7271Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5749 7182..7271 +
1622930934.2032223-CDS-H-elongata_contig5749:7460..76101622930934.2032223-CDS-H-elongata_contig5749:7460..7610Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5749 7461..7610 +
1691679630.8845637-CDS-H-elongata_contig5749:7460..76101691679630.8845637-CDS-H-elongata_contig5749:7460..7610Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5749 7461..7610 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig5749.13218.1prot_H-elongata_contig5749.13218.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig5749 2572..7610 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig5749.13218.1

>prot_H-elongata_contig5749.13218.1 ID=prot_H-elongata_contig5749.13218.1|Name=mRNA_H-elongata_contig5749.13218.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=346bp
MPSPIFLSVAGWLFLGIRVGAFFLSGVQPNMPFSLSRRASVWCSGCPRVV
LTKRTSWAAADCHHLHMLAENDVESPVDDVNEKRQYALDTLIEQFTSPEN
GNLTAAVDKYLDFCDHAFLTHLRGRIASAGAESTWGIALRLVEEGINMAM
QRRLAAADTNLRRVLDLAPDIKAMEGKIRTLFREGEVDMAFIVTINMNLQ
GAKEANGAENAVKLLTHLTMFMMDVQDEQVNPELKLLRSLLRTECDRVRK
SMLQEHLQITHYDIFVEKPLDTNKVQPKQLRAAIQDMIAEVGELGQAADA
RLTVFLRGLQVEIDDVIKSSERPGPYREYHRRNLQTGVEGNDHAS*
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mRNA from alignment at H-elongata_contig5749:2569..7617+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig5749.13218.1 ID=mRNA_H-elongata_contig5749.13218.1|Name=mRNA_H-elongata_contig5749.13218.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=5049bp|location=Sequence derived from alignment at H-elongata_contig5749:2569..7617+ (Himanthalia elongata Himel1 dioecious)
TTCATGCCAAGTCCAATCTTCCTTTCGGTAGCCGGATGGCTCTTCTTGGG
AATACGGGTGGGAGCCTTCTTCCTCTCAGGTGTTCAACCCAATATGCCAT
TCTCTTTATCCAGGCGGGCCAGCGTTTGGTGCAGCGGTTGCCCTCGCGTC
GTTTTAACAAAACGGACCTCGTGGGCCGCAGCAGATTGCCACCATCTTCA
CATGTTAGCAGAGAACGACGTTGAGTCTCCGGTCGATGATGTTAATGAGA
AGAGACAATATGCTCTAGATACCCTCATTGAGCAGTTCACATCACCCGAG
AATGGCAACTTGACAGCAGCGGTGGACAAATACCTGGATTTTTGTGATCA
TGCATTCTTGACACATCTCCGTGGGAGAATCGCGAGCGCAGGGGCAGAAT
CAACTTGGGTGAGAATAGTTTACGAGACGCATGGGCTACGTGTTTCTTGT
CTTAGATTGTCTCGCATTGGGAGCCCTGTTCCTGGAACGTATACAGGCTT
GACGGCCATTTCTTATTTATACTTCCGATACTGATGTGATTAGCGTGCAT
GCCTACTCTACCAATAGTGAGTGTAGGAAAAGAGAGGCGTACAAAATTGC
AAAATTGCTCCATGATCACATACGGCAGAGTAAGATCAACATGATTTGGT
TGCCTCCTGCTTGTGGTCTCAACAGGGAAAATATATTTTCCCCTGCCCCC
GTTCGGCTGCAAGCAGGAGAAAATATATTTCACCTGACCACAAGCAGGAG
GTAACCAAATCCGGTTGATTTTACTCTGCTACATGTGCTTATGACCATAC
GTTCACACCAATCTTGGTGAAATCCAAGGGACCAACTATAGTCATGTTTG
AATACAGTATTGTATATTAGATAAGCTCCAAATCGTCACATGTTATTAAT
CGGGTTTCCCAATGAAAATCGCGTTTGAACAGCATAATATGTTGGGGAGA
TGCCCACAGTTGTACTGTAGACTTACATTGTTCATAAGGAGACGCCAAGC
CAAAACGCAAGGTAGGCGGAGAAGTTGGGCTGTGACGGGGTGGGGTGTAT
GAAACGCCTTTTCGATATCTAGTAGCTCCTAAATGCGAACTAGTTGGGAT
CTTGAGTGTGAACCTCCGGTCCAGTACAGGCTCAATTCGAGGAAAAGTGG
AATATCATGTGTTGCTTAGGGACTTTTCTGAACGTTTTTTTGTTATTGTT
TCCGTACGGTTATGGAGCAGAGCTTAGAACCGAGGTTTCTGCTCAGCTCG
CCAATACAGAACCTCTTACACCCACCACATGCAGAGGGCATTAAACAAAA
GGTAGATATCCGCCGGTTGGGCGCTTTCCCGATCGATTTTTTTGAAACGT
TTTTTTCTGTGGTTCTCGAGGCGGTCTGGAGAACCGCGCAAAACCGACGT
TTTTGCCGAGCCGACCAACACCGCACTATTTGGGCCCACAGCAGCTCGCC
CACCCCGAGGATAGCTACAGTGAGGAGGTGAGTATACTGTGTTGGTTGCC
TCCCGAGTCCCAAATGTGTGAGTGATTTTTTCTCTAACATGATGCCAACC
ATATGCGGAACACATTGCGGCGGTCTGATAATGAAGCATACTCGAATTGA
GCTAAAGAACTTTTCGAATGGAGCCTGTACACTGGACTAGAGGTAGGTGA
GGACTAAAGTTCAACTATTAAAGTACTTTCCGTTTATTTCGCATGATCCG
CTCAAACCGGTTTGTCTCTGTAATGAAGCGTCAGCGCCACCCTCGTAGCA
TCGTTTTCTTCGCTCAATATCATTACAGAGTCCGATATTTTAATATAAGG
TCATCTTTTATGGCATCGGATTTGGATCTGGAATATTATTTTTCCCAAAA
ACCCCATGAGCTCGTTCCAACATTCACACCTTCTTAGCACCGTGGAAGGT
GTAATCCAGGGGACCAACTATTGGATCTGGGGCTTTTCCCGGAATCTGAG
AAATACGGAGCTTCTATTTTATGGTATTTGGATAAAAAACATGAAATGTT
TGCAACGATTCACGCGGCGTGTATGCATTGTGCTACCCACCTTTCTTACA
ATAAGTTTTTGAACCGTCGGGGGGCGTGGTACAGACAGGCAGCAGCACGC
CAACATGACTGAAAGTCTGCTTTTCACGAAAAACGATAGGTTCCTTCTTT
GGTGTCTAGAGAGCTTAAGAAAGACATCTACACTAAAGACGCAATGTACT
TAACCATCCTCCAGGGGGGAGGGCTGTGCCTGGTGGACAGTTATCCATGA
TTTAGTTGTTCCAGCGCGTGTTAACTTCCCCCCCCCCCAAACACAATAAC
AAAATGAAGAGTCGTGTGTGCAACATATCTACTGCTGCTGTATGAAAACA
CAAATTACCAGGCAAAAACCTTCCCTTTGAGGGCTGTGCCTCATGGAGCG
TGTCTGTCTACTACTGCTGCTGTATGAAAGCACACATGACTGGGCAAAAG
CCTTCTTTTTGAGGGCTGTGCCTGGTGGAACGTGTCTCGTATCGGAGTAG
CTATGGGATAAATCCGAGCGTGGGTAGACTTGCCAAGAGCGCTTGACGCG
GGGACCATCACCACCCTCCGTGTCCTCTAGCAAGTCCAAAACCATATCCC
ACTCGGCCAGTGCCCTAGCTCGGCGCCGTTTCCGGCATGTCACCTGAGAA
ACAAACATCGCTCCCTGACGGGTTCATGGGGGCCGTTCAACGCCATGATA
TATACTCTCGGTGCTGCGTGCCGCGGGTAACCTCTCTGCTTGGTGGGACC
TTAACGTGTGCACAACATGCAATTATATGTGGTTATCATATATATAGCCT
CATGGTGACTTTGTTACTCTTCCAAATGCAAACGCCTGCGTCAATTCGGG
AACACCAACGATTGCTTCGCAGCTCGCACGGATTTGGGCCCCAAATACGA
TGGATTCGAGGGCCAAATCATCACATCCGACCAAATACCATCCCGTAAAA
TAGGAATTTTCGGATATGGATCCCAAAAAATACAGATCGAAACACGAAAC
TATCAAATACTATGTCCATAAAAGATGGTCTAATTTACGAGTATTTAATA
CTGTAATGGTTTTATTTACATCAAATTACCAGGCGTACGACGGAGTTTCC
TCCTATATAATACTATTGAATGCCCTCATGCTTCTCAGGGAATCGCTTTG
CGGCTTGTGGAGGAAGGGATCAACATGGCCATGCAAAGAAGACTAGCAGC
AGCGGATACCAACCTTCGGCGCGTTCTCGATTTGGTGCGATCGGATGTCG
AGAAGAAAATCCCGCCGTCCTTAACGACAAACCCAGATGAGGAGTAAAGT
ACAGTACACAATTATGTCGGGTATGTTTAAGCGATAAACCTTGCGTTGAC
GCTGATAGTCGCAATCGAGGCGCTGCATTTTGGGGCATAAAAATAGCCTC
TTCTTTGTACAACTGATACTGTTCCCTCGAAGCGAGTGCGCTCCCAGGCT
TATGACAGTTTTCACTAACAGACTAGTTAGCAAAGGAAATGCTAATTTTG
TGCAATGCGTCTGAACAAGACCTGTTGGTCAAAGGGCTCTTACTAATGGT
ATTATACTGTGCAATACAATGGGTGTCCATTTCAGGCTCCTGATATCAAG
GCAATGGAAGGCAAAATCAGGACTTTATTCAGAGAAGGAGAGGTGGACAT
GGCTTTTATTGTAACGATCAATATGAACTTGCAGGGGGTGAGTATCTGAT
TGCATATTTAATTATCTGCAGAACAATTATTGAAGGTGAATTGTTGATAT
TAAATTTCCTTGACGTAAAATGATGGCTCGAGCTCATGGCGCTTGATATA
AAGATGTGGAGAGTTTTAGAGTTGAGAGCTAAACAAAACTTCACACCAAG
TCAAAAAATCATGACGTTCTCCAGGCAAAGGAAGCCAACGGTGCGGAGAA
TGCTGTCAAGCTGCTGACACATTTGACGATGTTCATGATGGACGTGCAAG
ACGAACAGGTATGTGCTCCATAAATAGGCCTAGAAATATCCTTAAATCGT
GCTCCATAAATACTGGTAATCGACAGCTAGAATTATGACAATACGCATCC
CAGAGATTTGCCTGTAAAGCCTTTGTTGCATATAAATAAAGTATTATTAG
TGATAACGAGTGGAGTCCATTACAAACCACTAGAGTAGCGAATTGTGAAC
ACAGACGAACTCGTTGTCGTTACAATTTGTCGAGGGGGGACGGTAGATGA
GATAAAGAAAACGCAGTCGCTTTTTTCGTTTGGAATAAAAAACCTCTAGT
TAATAACTGTGGTAAGGCAGTATTGTTAAAATCACATGACGGTACTTAAA
CTTAGTTCCATCTAAAAACGATGATCGTGATGTTTGAGGGCACAGGTAAA
TCCAGAATTGAAGCTTTTACGTTCGCTGCTTCGAACGGAGTGCGACCGCG
TGAGAAAGTCGATGCTTCAGGAGCATTTACAAATCACCCATTACGACATA
TTTGTGGTGAGAAAACGCATATACGCTGTGCAAACAAAACTGTACAGGAA
CGCACAAGGCGCAATTACACTCCGCTTGAGTTTTGTACATCAGCCGTTTG
GGCATGTCTCATTTAAGTGTAAGACCGCTGATCCGACTCGTTGTTCGTTT
CCGTAACACGCAGGAAAAACCGTTGGACACTAATAAAGTACAGCCAAAAC
AACTTCGCGCAGCCATCCAAGACATGATCGCAGAAGTGGGGGAACTTGGT
CAGGTGTGTCTGTTTCTTTTCACATGGTTTTAACCTTCCCCATAGTCGGA
TATTAATATATAAGGGAAACAGGGGTACAGCTGCCGAGTACTTGATATAG
AACGAGAAAATGTGACTCCATCGGAATTCTGTTCGAAGTACCAAAAAATG
TACTAAACCAATCACCGTTCACACTCGCTTCTCGTCCCACAGGCTGCAGA
TGCAAGGCTGACAGTTTTTTTGCGGGGTCTCCAGGTCGAGATCGATGACG
TCATCAAAAGTAGCGAAAGGCCGGGCCCCTACAGGGAATATCACCGGAGA
AATCTTCAAACCGGCGTTGAAGGAAACGACCATGCGTCTTAACATTGAC
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Coding sequence (CDS) from alignment at H-elongata_contig5749:2569..7617+

>mRNA_H-elongata_contig5749.13218.1 ID=mRNA_H-elongata_contig5749.13218.1|Name=mRNA_H-elongata_contig5749.13218.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2076bp|location=Sequence derived from alignment at H-elongata_contig5749:2569..7617+ (Himanthalia elongata Himel1 dioecious)
ATGCCAAGTCCAATCTTCCTTTCGGTAGCCGGATGGCTCTTCTTGGGAAT
ACGGGTGGGAGCCTTCTTCCTCTCAGGTGTTCAACCCAATATGCCATTCT
CTTTATCCAGGCGGGCCAGCGTTTGGTGCAGCGGTTGCCCTCGCGTCGTT
TTAACAAAACGGACCTCGTGGGCCGCAGCAGATTGCCACCATCTTCACAT
GTTAGCAGAGAACGACGTTGAGTCTCCGGTCGATGATGTTAATGAGAAGA
GACAATATGCTCTAGATACCCTCATTGAGCAGTTCACATCACCCGAGAAT
GGCAACTTGACAGCAGCGGTGGACAAATACCTGGATTTTTGTGATCATGC
ATTCTTGACACATCTCCGTGGGAGAATCGCGAGCGCAGGGGCAGAATCAA
CTTGGATGCCAAGTCCAATCTTCCTTTCGGTAGCCGGATGGCTCTTCTTG
GGAATACGGGTGGGAGCCTTCTTCCTCTCAGGTGTTCAACCCAATATGCC
ATTCTCTTTATCCAGGCGGGCCAGCGTTTGGTGCAGCGGTTGCCCTCGCG
TCGTTTTAACAAAACGGACCTCGTGGGCCGCAGCAGATTGCCACCATCTT
CACATGTTAGCAGAGAACGACGTTGAGTCTCCGGTCGATGATGTTAATGA
GAAGAGACAATATGCTCTAGATACCCTCATTGAGCAGTTCACATCACCCG
AGAATGGCAACTTGACAGCAGCGGTGGACAAATACCTGGATTTTTGTGAT
CATGCATTCTTGACACATCTCCGTGGGAGAATCGCGAGCGCAGGGGCAGA
ATCAACTTGGGGAATCGCTTTGCGGCTTGTGGAGGAAGGGATCAACATGG
CCATGCAAAGAAGACTAGCAGCAGCGGATACCAACCTTCGGCGCGTTCTC
GATTTGGGAATCGCTTTGCGGCTTGTGGAGGAAGGGATCAACATGGCCAT
GCAAAGAAGACTAGCAGCAGCGGATACCAACCTTCGGCGCGTTCTCGATT
TGGCTCCTGATATCAAGGCAATGGAAGGCAAAATCAGGACTTTATTCAGA
GAAGGAGAGGTGGACATGGCTTTTATTGTAACGATCAATATGAACTTGCA
GGGGGCTCCTGATATCAAGGCAATGGAAGGCAAAATCAGGACTTTATTCA
GAGAAGGAGAGGTGGACATGGCTTTTATTGTAACGATCAATATGAACTTG
CAGGGGGCAAAGGAAGCCAACGGTGCGGAGAATGCTGTCAAGCTGCTGAC
ACATTTGACGATGTTCATGATGGACGTGCAAGACGAACAGGCAAAGGAAG
CCAACGGTGCGGAGAATGCTGTCAAGCTGCTGACACATTTGACGATGTTC
ATGATGGACGTGCAAGACGAACAGGTAAATCCAGAATTGAAGCTTTTACG
TTCGCTGCTTCGAACGGAGTGCGACCGCGTGAGAAAGTCGATGCTTCAGG
AGCATTTACAAATCACCCATTACGACATATTTGTGGTAAATCCAGAATTG
AAGCTTTTACGTTCGCTGCTTCGAACGGAGTGCGACCGCGTGAGAAAGTC
GATGCTTCAGGAGCATTTACAAATCACCCATTACGACATATTTGTGGAAA
AACCGTTGGACACTAATAAAGTACAGCCAAAACAACTTCGCGCAGCCATC
CAAGACATGATCGCAGAAGTGGGGGAACTTGGTCAGGAAAAACCGTTGGA
CACTAATAAAGTACAGCCAAAACAACTTCGCGCAGCCATCCAAGACATGA
TCGCAGAAGTGGGGGAACTTGGTCAGGCTGCAGATGCAAGGCTGACAGTT
TTTTTGCGGGGTCTCCAGGTCGAGATCGATGACGTCATCAAAAGTAGCGA
AAGGCCGGGCCCCTACAGGGAATATCACCGGAGAAATCTTCAAACCGGCG
TTGAAGGAAACGACCATGCGTCTTAAGCTGCAGATGCAAGGCTGACAGTT
TTTTTGCGGGGTCTCCAGGTCGAGATCGATGACGTCATCAAAAGTAGCGA
AAGGCCGGGCCCCTACAGGGAATATCACCGGAGAAATCTTCAAACCGGCG
TTGAAGGAAACGACCATGCGTCTTAA
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