mRNA_H-elongata_contig57481.13217.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig57481.13217.1 vs. uniprot
Match: D7FVB8_ECTSI (CobW C-terminal domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVB8_ECTSI) HSP 1 Score: 444 bits (1143), Expect = 1.920e-146 Identity = 244/398 (61.31%), Postives = 279/398 (70.10%), Query Frame = 1
Query: 1 SKDGADGSMLADNLFELKNGCICCSVKDDLVTTLETLLQRRSMFDYIIIETTGLANPGPVASVFWLDDALESALRLDGIVTLVDAKNFRRQLQRGPDENGADRENGERKDQFDKARTAQNEAAVQVAYADRVLINKTDLVSKEVLANVIAQVQAINTMAAVHCTTRSAVDIDWVLDTRCFSPELALVIDPSLAPTGTSTPGHHQGQHPEGSGTVFETPTVPSLGNDSGNDSYIKETLAVESDGEVHTHD----HGHGP----HRNGDDCARCNATSTSISKEDPSGNPCSVHDPAVTTCAIDILGSLELRRLERWLGELLWEPPPGGTDVYRVKGVVSVEGRVERFVVQGVGDLFEVTPTGASGSAWKEDEARHCKVVFIGKYISRDDLERGLRSCMV 1170
+KDGADGS+LADNLFEL+NGCICC+VKDDLVTTLE LLQRR+ FDY+IIETTGLANPGPVASVFWLD+ALESALRLD IVTLVDAKNF RQLQR P E GE + + +NEAA+QVAYADRVLINK+DLVS E L +V+ +V+ IN +A V CT RSAVD+ W+LDT CFS ELA +DPSLAP Q + GS D I T + D VH+HD GH H +G+ C C A E P G CSVHDP+VTTCA+D+ GSL+L RLERWLG LLW+PPPGGT+VYRVKGVVSVEGR ERFVVQGV DLFEVTP GSAW+E EAR CKVVFIG+ +S DLE G+RSCMV
Sbjct: 98 AKDGADGSVLADNLFELRNGCICCAVKDDLVTTLEMLLQRRNKFDYVIIETTGLANPGPVASVFWLDEALESALRLDSIVTLVDAKNFVRQLQRVPGEGAEAGAEGEEQ----SGKRPKNEAAMQVAYADRVLINKSDLVSTETLDDVVGRVRTINALAEVRCTKRSAVDLAWILDTECFSSELAAALDPSLAPPRALLGTAQQNEGGRGSSAA---------------DRGIARTGSGPGDAHVHSHDVEPSGGHTESVHHHADGEACDECAAA------EGPGGTACSVHDPSVTTCAVDLPGSLDLSRLERWLGGLLWDPPPGGTEVYRVKGVVSVEGRDERFVVQGVADLFEVTPAEVVGSAWQEGEARRCKVVFIGRLLSSRDLELGIRSCMV 470
BLAST of mRNA_H-elongata_contig57481.13217.1 vs. uniprot
Match: A0A835YKS4_9STRA (CobW/HypB/UreG, nucleotide-binding domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKS4_9STRA) HSP 1 Score: 258 bits (659), Expect = 1.300e-75 Identity = 173/389 (44.47%), Postives = 221/389 (56.81%), Query Frame = 1
Query: 1 SKDGADGSMLADNLFELKNGCICCSVKDDLVTTLETLLQRRSMFDYIIIETTGLANPGPVASVFWLDDALESALRLDGIVTLVDAKNFRRQLQRGPDENGADRENGERKDQFDKARTAQNEAAVQVAYADRVLINKTDLVSKEVLANVIAQVQAINTMAAVHCTTRSAVDIDWVLDTRCFSPELALVIDPSLAPTGTSTPGHHQGQHPEGSGTVFETPTVPSLGNDSGNDSYIKETLAVESDGEVHTHDHGHGPHRNGDDCARCNATSTSISKEDPSGNPCSVHDPAVTTCAIDILGSLELRRLERWLGELLWEPPPGGTDVYRVKGVVSVEGRVERFVVQGVGDLFEVTPTGASGSAWKEDEARHCKVVFIGKYISRDDLERGLRSCM 1167
+KDG DGS+LADNLFEL+NGCICC+VKDDLVTTLETLLQ+RS FDYIIIETTGLANPGPVA+ FWLDDALESALRLD I+T+VDAKN R L D++R EAA+Q+A+ADR+L+NK+DLVS +A + ++++ IN + T R A+D+D VLD RCF D + A P + + SD E H +GD C A S+S S SG PC VH V+T AI + +++L L+ P T VYR+KGV++V G +++V+QGV DLF+VT T A AW+ DE R KVVFIG+ + R LE GLR C+
Sbjct: 70 AKDGMDGSVLADNLFELRNGCICCTVKDDLVTTLETLLQQRSKFDYIIIETTGLANPGPVAACFWLDDALESALRLDAIITVVDAKNIARYL--------------------DESR----EAALQIAFADRLLLNKSDLVSAARVAALSSRLRGINAACDIEVTHRCAIDLDKVLDLRCFHA------DSTAAXXXXXXXXXXXXXXP----------------------------VELCSDAE----------HEHGDSCGHGAAQSSSGSS---SGAPC-VHTSGVSTFAITLTEAVDLVALDA--------SRPHRT-VYRIKGVLAVAGSDKKYVLQGVHDLFDVTETTA---AWEPDEPRLSKVVFIGRGLDRGKLEEGLRGCV 374
BLAST of mRNA_H-elongata_contig57481.13217.1 vs. uniprot
Match: G4Z3P4_PHYSP (CobW C-terminal domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4Z3P4_PHYSP) HSP 1 Score: 211 bits (536), Expect = 5.560e-58 Identity = 150/411 (36.50%), Postives = 199/411 (48.42%), Query Frame = 1
Query: 1 SKDGA-DGSMLADNLFELKNGCICCSVKDDLVTTLETLLQRRSMFDYIIIETTGLANPGPVASVFWLDDALESALRLDGIVTLVDAKNFRRQLQRGPDENGADRENGERKDQFDKARTAQNEAAVQVAYADRVLINKTDLVS-KEVLANVIAQVQAINTMAAVHCTTRSAVDIDWVLDTRCFSPELALVIDPSLAPTGTSTPGHHQGQHPEGSGTVFETPTVPSLGNDSGNDSYIKETLAVESDGEVHTHD------HGHGPHRNGDDCARCNATSTSISKEDPSGNPCSVHDPAVTTCAIDILGSLELRRLERWLGELLWEPPPGGTD--------VYRVKGVVSVEGRVERFVVQGVGDLFEVTPTGASGSAWKEDE-----ARHCKVVFIGKYISRDDLERGLRSCMV 1170
+KDGA D + + D +EL NGC+CCSV+ DLV TLE LL+RR FDYI++ETTG+A+PG VAS+FW+DD LE + LDGIVTLVDA L PD Q EAA Q+AYADR+L+NK DLV K+ + +V +N +A+VH T RS VD+D +L+ + F+ A ++ KE ++ GE H H+ H H H G TTC G L+ +LERWLGELLWE ++RVKGVV+V G +F++Q V +LFEV AS W EDE R +VVFIG ++ +++LE GLRSC+V
Sbjct: 65 AKDGAGDDAQVMDGFYELSNGCVCCSVRSDLVNTLEKLLERRDRFDYILVETTGMADPGKVASIFWVDDELEGRIFLDGIVTLVDAPRLDFHLDH-PD--------------------TQREAAAQLAYADRILLNKGDLVQDKDRRREIEQRVSQVNGVASVHWTERSRVDLDDILNIKSFTTSRAEQVE--------------------------------------------KELHSLLYAGEEHDHEKCNDEHHDHTTHTGG----------------------------MQTTCVRIRDGPLDHDKLERWLGELLWEQEDDEIKDAAAKHQKLFRVKGVVAVSGEPNKFILQAVHELFEVY---ASEERWTEDELSVMEGRVTQVVFIGLHLRKNELEAGLRSCVV 379
BLAST of mRNA_H-elongata_contig57481.13217.1 vs. uniprot
Match: A0A329RXQ7_9STRA (CobW C-terminal domain-containing protein n=12 Tax=Phytophthora TaxID=4783 RepID=A0A329RXQ7_9STRA) HSP 1 Score: 209 bits (533), Expect = 1.890e-57 Identity = 152/413 (36.80%), Postives = 198/413 (47.94%), Query Frame = 1
Query: 1 SKDGADGSMLADNLFELKNGCICCSVKDDLVTTLETLLQRRSMFDYIIIETTGLANPGPVASVFWLDDALESALRLDGIVTLVDAKNFRRQLQRGPDENGADRENGERKDQFDKARTAQNEAAVQVAYADRVLINKTDLVSK-EVLANVIAQVQAINTMAAVHCTTRSAVDIDWVLDTRCFSPELALVIDPSLAPTGTSTPGHHQGQHPEGSGTVFETPTVPSLGNDSGNDSYIKETLAVESDGEVHTH----DHGHGPHRNGDDCARCNATSTSISKEDPSGNPCSVHDPAVTTCAIDILGSLELRRLERWLGELLW--------EPPPGGT-----DVYRVKGVVSVEGRVERFVVQGVGDLFEVTPTGASGSAWKEDE-----ARHCKVVFIGKYISRDDLERGLRSCMV 1170
+KDGA G ++ D +EL NGC+CCSV+DDLV TLE LL+RR FDYI++ETTG+A+PG VASVFW+DD LE + LDGIVTLVDA L PD Q EAA Q+AYADR+L+NK DLV E + +V +N +A+V T RS VD+D +L+ + F+ A ++ L TL E E H + H H H G TTC G L+ +LERWLGELLW E PG ++RVKGVV++ G +F++Q V +LFEV AS W EDE +R +VVFIG ++ + +LE GLRSC+V
Sbjct: 71 AKDGAGGDVM-DGFYELSNGCVCCSVRDDLVNTLEKLLERRDRFDYIVVETTGMADPGKVASVFWVDDELEGRIFLDGIVTLVDAPRLNFHLTH-PD--------------------TQREAAAQLAYADRILLNKGDLVPDIEQRLEIEQKVTQVNGVASVRWTERSRVDLDDILNIKSFTTSRAEQVEKEL------------------------------------------HTLLTEGKEEDHENCKDESHDHAIHTGG----------------------------MQTTCVRIRDGPLDQDKLERWLGELLWDQDEDAAAEIKPGSEAATRQKLFRVKGVVAIAGEPSKFILQAVHELFEVY---ASEERWTEDELNNKASRVTQVVFIGLHLRKSELEAGLRSCVV 388
BLAST of mRNA_H-elongata_contig57481.13217.1 vs. uniprot
Match: K3WNX3_GLOUD (CobW C-terminal domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WNX3_GLOUD) HSP 1 Score: 209 bits (533), Expect = 2.210e-57 Identity = 143/398 (35.93%), Postives = 204/398 (51.26%), Query Frame = 1
Query: 1 SKDGADGSMLADNLFELKNGCICCSVKDDLVTTLETLLQRRSMFDYIIIETTGLANPGPVASVFWLDDALESALRLDGIVTLVDAKNFRRQLQRGPDENGADRENGERKDQFDKARTAQNEAAVQVAYADRVLINKTDLV-SKEVLANVIAQVQAINTMAAVHCTTRSAVDIDWVLDTRCFSPELALVIDPSLAPTGTSTPGHHQGQHPEGSGTVFETPTVPSLGNDSGNDSYIKETLAVESDGEVHTHDHGHGPHRNGDDCARCNATSTSISKEDPSGNPCSVHDPAVTTC-AIDILGSLELRRLERWLGELLWEPPPGGTD-------VYRVKGVVSVEGRVERFVVQGVGDLFEVTPTGASGSAWKEDEARHCKVVFIGKYISRDDLERGLRSCM 1167
+KDGA+G + D+ +EL NGC+CCSV+DDLV TLE LL RR FDYI++ETTG+ANPG VASVFW+DD LE + LDGIVTLVDA + L PD +NEAA Q+AYADR+L+NK DLV S+E ++A+V+A+N +A V T R+ +D+D +L+ + F+ + AL I+ L GHH+ SG + +E HTH TTC +I L++ +LERWLGELLW+ G + ++R+KGV+++ +F++Q V +LFEV + S S +++ ++VFIG ++ LE G RSC+
Sbjct: 86 AKDGANGQVF-DDFYELSNGCVCCSVRDDLVNTLEKLLARRDRFDYILVETTGMANPGKVASVFWVDDELEGRIFLDGIVTLVDAPRLQFHLDH-PD--------------------TRNEAASQLAYADRILLNKRDLVTSEERQEAIVARVKAVNAIAKVSWTHRAEIDLDEILNIQSFTSQRALDIESILTAQQLQQQGHHR---------------------HSGEGEHKEE----------HTHT-----------------------------------GAMQTTCLSIGDGARLDMSKLERWLGELLWDQADGVSSASTKDQRLFRMKGVLAIADEPNKFILQAVHELFEVYVSDESWSEASQEDVCS-RIVFIGLHLDLKRLESGFRSCI 394
BLAST of mRNA_H-elongata_contig57481.13217.1 vs. uniprot
Match: D0P3V3_PHYIT (Cobalamin synthesis protein, putative n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0P3V3_PHYIT) HSP 1 Score: 209 bits (532), Expect = 3.070e-57 Identity = 154/413 (37.29%), Postives = 207/413 (50.12%), Query Frame = 1
Query: 1 SKDGADGSMLADNLFELKNGCICCSVKDDLVTTLETLLQRRSMFDYIIIETTGLANPGPVASVFWLDDALESALRLDGIVTLVDAKNFRRQLQRGPDENGADRENGERKDQFDKARTAQNEAAVQVAYADRVLINKTDLV-SKEVLANVIAQVQAINTMAAVHCTTRSAVDIDWVLDTRCFSPELALVIDPSLAPTGTSTPGHHQGQHPEGSGTVFETPTVPSLGNDSGNDSYIKETLAVESDGEVHTHDHGHGPHRNGDDC---ARCNATSTSISKEDPSGNPCSVHDPAVTTCAIDILGSLELRRLERWLGELLWEP--------PPGGT-----DVYRVKGVVSVEGRVERFVVQGVGDLFEVTPTGASGSAWKEDEARHCK------VVFIGKYISRDDLERGLRSCMV 1170
+KDGA G ++ D +EL NGC+CCSV+DDLV TLE LL+R+ FDYI++ETTG+A+PG VASVFW+DD LE + LDGIVTLVDA L+ PD Q EA+ Q+AYADR+L+NK+DLV KE + +V N MA+V RS V++ +L+ + F+ A ++ KE + ++G+ HDH +DC + NAT T + TTC G L +LERWLGELLWE PG +++RVKGVV+V G ++FV+Q V +LFEV AS W EDE +CK VVFIG ++ + +LE GLRSC+V
Sbjct: 75 AKDGAGGDVM-DGFYELSNGCVCCSVRDDLVNTLEKLLERQDRFDYIVVETTGMADPGKVASVFWVDDELEGRIFLDGIVTLVDAPRLNFHLKH-PD--------------------TQREASAQLAYADRILLNKSDLVPDKEQRLAIEKKVTQANGMASVRWAERSRVELGDILNIKSFTTSRAAQVE--------------------------------------------KELHTLLTEGKEEDHDH--------EDCNEESDVNATHTGGMQ---------------TTCVRIRDGLLGRDKLERWLGELLWEQGKAVGAEIQPGSEAATRQELFRVKGVVAVAGEPKKFVLQAVHELFEVY---ASEEDWTEDEL-NCKESLVTQVVFIGLHLRKSELEAGLRSCVV 394
BLAST of mRNA_H-elongata_contig57481.13217.1 vs. uniprot
Match: B5Y598_PHATC (Predicted protein (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B5Y598_PHATC) HSP 1 Score: 207 bits (526), Expect = 6.050e-57 Identity = 144/391 (36.83%), Postives = 189/391 (48.34%), Query Frame = 1
Query: 1 SKDGADGSMLADNLFELKNGCICCSVKDDLVTTLETLLQRRSMFDYIIIETTGLANPGPVASVFWLDDALESALRLDGIVTLVDAKNFRRQLQRGPDENGADRENGERKDQFDKARTAQNEAAVQVAYADRVLINKTDLVSKEVLANVIAQVQAINTMAAVHCTTRSAV-DIDWVLDTRCFSPELALVIDPSLAPTGTSTPGHHQGQHPEGSGTVFETPTVPSLGNDSGNDSYIKETLAVESDGEVHTHDHGHGPHRNGDDCARCNATSTSISKEDPSGNPCSVHDPAVTTCAIDILGSLELRRLERWLGELLWEPPPGGTDVYRVKGVVSVEGRVERFVVQGVGDLFEVTPTGASGSAWKEDEARHCKVVFIGKYISRDDLERGLRSCMV 1170
++DG D L D L EL NGCICC+VKD LV+TLE LLQRR DYI+IE +G+ANPGP+AS+FWLD+ L S LRLDGIVTLVDA + RQL A EAA Q+AYADR+L+NK DLV + ++ ++ I+ A + T SAV D+ WVLD CF + +D +L + SD H+H H HG C+ C A H +V+T AI GS++LR+L++WL LLW V V+ RF+VQ V DL+E P W +E R CKVVFIG+ + ++DL +G SCM+
Sbjct: 48 ARDGVDNGSLID-LIELPNGCICCTVKDSLVSTLELLLQRRRDLDYILIECSGMANPGPIASLFWLDEGL-SRLRLDGIVTLVDAAHLERQLG------------------------ATKEAAQQIAYADRILLNKVDLVDEASALRLLNLIRTIHPTAPIRRTQFSAVPDLTWVLDASCFDVDRVKDVDRAL------------------------------------------NEIEHCSD---HSHQHDHGKEAT---CSICFAHK---------------HTASVSTLAIVEEGSVDLRKLDQWLASLLWPNQDEQDKVLPVEFTDDHGLDSRRFIVQAVHDLWETHPASRE-LRWDSEEVRDCKVVFIGRNLKKEDLRKGFLSCML 348
BLAST of mRNA_H-elongata_contig57481.13217.1 vs. uniprot
Match: A0A225W6C1_9STRA (Cobalamin synthesis protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225W6C1_9STRA) HSP 1 Score: 207 bits (527), Expect = 9.850e-57 Identity = 149/407 (36.61%), Postives = 198/407 (48.65%), Query Frame = 1
Query: 1 SKDGADGSMLADNLFELKNGCICCSVKDDLVTTLETLLQRRSMFDYIIIETTGLANPGPVASVFWLDDALESALRLDGIVTLVDAKNFRRQLQRGPDENGADRENGERKDQFDKARTAQNEAAVQVAYADRVLINKTDLVSK-EVLANVIAQVQAINTMAAVHCTTRSAVDIDWVLDTRCFSPELALVIDPSLAPTGTSTPGHHQGQHPEGSGTVFETPTVPSLGNDSGNDSYIKETLAVESDGEVHTHDHGHGPHRNGDDCARCNATSTSISKEDPSGNPCSVHDPAVTTCAIDILGSLELRRLERWLGELLWEPPPGGTD------------VYRVKGVVSVEGRVERFVVQGVGDLFEVTPTGASGSAWKEDE-----ARHCKVVFIGKYISRDDLERGLRSCM 1167
+KDGA M D +EL NGC+CCSV+DDLV TLE LL+RR FDYI++ETTG+A+PG VAS+FW+DD LE + LDGIVTLVDA L PD Q EAA Q+AYADR+L+NK DLVS E + + IN MA++ T RS VD+D +L+ + F+ A ++ L H+G+ ++ E + E H H H G C R +HD G L+ +LERWLGELLWE T+ ++R+KGVV+V G +F++Q V +LFEV AS W DE R +VVFIG ++ + +LE GLRSC+
Sbjct: 65 AKDGAGDVM--DGFYELSNGCVCCSVRDDLVNTLEKLLERRDRFDYILVETTGMADPGKVASIFWVDDELEGRIFLDGIVTLVDAPRLDFHLSH-PD--------------------TQREAAAQLAYADRILLNKGDLVSDTEQRREIEKKTTQINGMASIRWTERSRVDLDDILNIKSFTTSRAEQVEKELRTL-------HEGEE------------------------HVHENCSDEQ----HDHTHTGGMQTT---CVR-------------------IHD-----------GPLDQDKLERWLGELLWEQEEVDTETESGSDAAKRQKLFRIKGVVAVAGESNKFILQAVHELFEVY---ASDEQWANDELDSKDGRVTQVVFIGLHLRKSELETGLRSCV 377
BLAST of mRNA_H-elongata_contig57481.13217.1 vs. uniprot
Match: A0A0P1AZT7_PLAHL (Cobalamin synthesis protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AZT7_PLAHL) HSP 1 Score: 207 bits (528), Expect = 1.370e-56 Identity = 149/410 (36.34%), Postives = 206/410 (50.24%), Query Frame = 1
Query: 1 SKDGADGSMLADNLFELKNGCICCSVKDDLVTTLETLLQRRSMFDYIIIETTGLANPGPVASVFWLDDALESALRLDGIVTLVDAKNFRRQLQRGPDENGADRENGERKDQFDKARTAQNEAAVQVAYADRVLINKTDLVSK-EVLANVIAQVQAINTMAAVHCTTRSAVDIDWVLDTRCFSPELALVIDPSLAPTGTSTPGHHQGQHPEGSGTVFETPTVPSLGNDSGNDSYIKETLAVES-DGEVHTHDHGHGPHRNGDDCARCNATSTSISKEDPSGNPCSVHDPAVTTCAIDILGS-LELRRLERWLGELLWEPPPG-------GTDV------YRVKGVVSVEGRVERFVVQGVGDLFEVTPTGASGSAWKEDE-----ARHCKVVFIGKYISRDDLERGLRSCM 1167
+KDGADG+++ D +EL NGCICCSV+DDLV TLE LL+RR FDYI++ETTG+A+PG VAS+FW+D LES + LDGIVTLVD+ D + K EA Q+AYADR+L+NK+DL+S + A++ QV+ IN MA+V T RS VD+ +L+ + F+ A ++ L H H KE E +GE H H S+H + T + I + L+ +LERWLGELLWE G GTDV +R+KG+VSV +++++Q V +LFEV AS W +DE +R ++VFIG ++ +D E GLRSC+
Sbjct: 82 AKDGADGNVM-DGFYELSNGCICCSVRDDLVNTLEKLLKRRDRFDYIVVETTGMADPGRVASIFWVDSELESRIFLDGIVTLVDSPRL---------------------DFYLKHPDTLREAVAQLAYADRILLNKSDLLSDMKQRASIQRQVKQINGMASVSWTERSRVDLADILNIKSFTTIRAEQVEKEL----------HALMHKR------------------------KEIFDQEQCNGEDHDH---------------------------------SIHTGGMQTVCVRIKDAPLDQDKLERWLGELLWEQDVGKSAESMLGTDVALRQKIFRMKGIVSVANERKKYILQAVQELFEVY---ASEECWNDDEFVSNESRVTQIVFIGLHLHKDQFEEGLRSCL 399
BLAST of mRNA_H-elongata_contig57481.13217.1 vs. uniprot
Match: A0A662XB97_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XB97_9STRA) HSP 1 Score: 205 bits (521), Expect = 1.070e-55 Identity = 149/410 (36.34%), Postives = 201/410 (49.02%), Query Frame = 1
Query: 1 SKDGADGSMLADNLFELKNGCICCSVKDDLVTTLETLLQRRSMFDYIIIETTGLANPGPVASVFWLDDALESALRLDGIVTLVDAKNFRRQLQRGPDENGADRENGERKDQFDKARTAQNEAAVQVAYADRVLINKTDLV-SKEVLANVIAQVQAINTMAAVHCTTRSAVDIDWVLDTRCFSPELALVIDPSLAPTGTSTPGHHQGQHPEGSGTVFETPTVPSLGNDSGNDSYIKETLAVESDGEVHTHDHGHGPHRNGDDCARCNATSTSISKEDPSGNPCSVHDPAVTTCAIDILGSLELRRLERWLGELLWEPPPG------GTDVY------RVKGVVSVEGRVERFVVQGVGDLFEVTPTGASGSAWKEDE--------ARHCKVVFIGKYISRDDLERGLRSCM 1167
+KDG DG + D+ +EL NGC+CCSV+DDLV TLE LL+RR FDYI++ETTG+A+PG VAS+FW+D LE + LDGIVTLVDA L PD Q EAA Q+AYADR+L+NK DLV K A + +V ++N MA+V T R+ V++D +L + F+ A ++ L H+ H +G ++S +D + H H H G TTC GSL+L +LER LGELLWE GTDV+ RVKGVV++ +F++Q V +LFEV P S W DE AR +VVFIG ++ +D+L GL+ C+
Sbjct: 76 AKDGGDGEVF-DDFYELSNGCVCCSVRDDLVNTLEKLLERRDRFDYILVETTGMADPGKVASIFWVDAELEGRIYLDGIVTLVDAPRLDFHLGH-PD--------------------TQREAAAQLAYADRILLNKGDLVPDKADRATIEQRVSSVNGMASVRWTERARVELDDILHIKSFTTSRAAEVEQEL----------HELLHHDG--------------HESCDDEH-----------------HNHAIHTGG----------------------------MQTTCVTIREGSLDLEKLERHLGELLWEQEENDAGTESGTDVFNRQKLFRVKGVVAIVNEPNKFILQAVHELFEVYP---SEERWAADELSNDGGEEARCTQVVFIGLHLRKDELVAGLQGCV 391 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig57481.13217.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig57481.13217.1 >prot_H-elongata_contig57481.13217.1 ID=prot_H-elongata_contig57481.13217.1|Name=mRNA_H-elongata_contig57481.13217.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=383bp MLADNLFELKNGCICCSVKDDLVTTLETLLQRRSMFDYIIIETTGLANPGback to top mRNA from alignment at H-elongata_contig57481:442..3060+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig57481.13217.1 ID=mRNA_H-elongata_contig57481.13217.1|Name=mRNA_H-elongata_contig57481.13217.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2619bp|location=Sequence derived from alignment at H-elongata_contig57481:442..3060+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig57481:442..3060+ >mRNA_H-elongata_contig57481.13217.1 ID=mRNA_H-elongata_contig57481.13217.1|Name=mRNA_H-elongata_contig57481.13217.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2298bp|location=Sequence derived from alignment at H-elongata_contig57481:442..3060+ (Himanthalia elongata Himel1 dioecious)back to top |