mRNA_H-elongata_contig57308.13197.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig57308.13197.1 vs. uniprot
Match: D8LGP8_ECTSI (AB hydrolase-1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGP8_ECTSI) HSP 1 Score: 100 bits (248), Expect = 3.330e-23 Identity = 43/64 (67.19%), Postives = 51/64 (79.69%), Query Frame = 1
Query: 7 QNPVILCHGYGMGAAAWHTVLKDLSASHHVFATDWLGYGLSSRPKWEAKGVGETEAFFVESLER 198
+ PV+LCHGYGMG WH L +L+AS HV A DWLG GLSSRP+W+ +GV ETEAFFV+SLER
Sbjct: 135 EIPVVLCHGYGMGVGGWHLNLGELTASTHVMAKDWLGCGLSSRPRWDLEGVKETEAFFVDSLER 198
BLAST of mRNA_H-elongata_contig57308.13197.1 vs. uniprot
Match: A0A835ZEV4_9STRA (Alpha/Beta hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEV4_9STRA) HSP 1 Score: 79.0 bits (193), Expect = 1.030e-15 Identity = 34/64 (53.12%), Postives = 46/64 (71.88%), Query Frame = 1
Query: 7 QNPVILCHGYGMGAAAWHTVLKDLSASHHVFATDWLGYGLSSRPKWEAKGVGETEAFFVESLER 198
+ P++LCHGYG GAAA+ L+A+ HV+A DW+GYG SSRPK+ KGV TE F++ +ER
Sbjct: 52 KPPLVLCHGYGQGAAAFALNFPHLTANLHVYAKDWMGYGQSSRPKFTPKGVDATEEHFIKYMER 115
BLAST of mRNA_H-elongata_contig57308.13197.1 vs. uniprot
Match: A0A815WEX5_9BILA (Hypothetical protein n=1 Tax=Didymodactylos carnosus TaxID=1234261 RepID=A0A815WEX5_9BILA) HSP 1 Score: 65.1 bits (157), Expect = 2.700e-11 Identity = 31/67 (46.27%), Postives = 45/67 (67.16%), Query Frame = 1
Query: 1 LRQNPVILCHGYGMGAAAWHTVLKDLSAS-HHVFATDWLGYGLSSRPKWEAKGVGETEAFFVESLER 198
L + ++L HG+G G W L LS+ +V+A D LG G SSRP+++AK VGE+E FF++SLE+
Sbjct: 84 LHETNLVLLHGFGAGIGFWLLNLDHLSSKFRNVYALDMLGCGRSSRPRFQAKTVGESELFFIDSLEK 150
BLAST of mRNA_H-elongata_contig57308.13197.1 vs. uniprot
Match: A0A8J2FHK0_9DINO (Hypothetical protein n=1 Tax=Amoebophrya sp. A120 TaxID=2202890 RepID=A0A8J2FHK0_9DINO) HSP 1 Score: 59.3 bits (142), Expect = 1.260e-8 Identity = 25/46 (54.35%), Postives = 30/46 (65.22%), Query Frame = 1
Query: 16 VILCHGYGMGAAAWHTVLKDLSAS---HHVFATDWLGYGLSSRPKW 144
++LC GYGMG A W V+ L H + A DWLG+GLSSRPKW
Sbjct: 506 IVLCPGYGMGCATWGMVVPSLRQKFPDHFIHAIDWLGWGLSSRPKW 551
BLAST of mRNA_H-elongata_contig57308.13197.1 vs. uniprot
Match: A0A7S1ZLF5_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZLF5_9STRA) HSP 1 Score: 57.8 bits (138), Expect = 4.320e-8 Identity = 33/73 (45.21%), Postives = 44/73 (60.27%), Query Frame = 1
Query: 4 RQN---PVILCHGYGMGAAAWHTVLKDLSASHH--VFATDWLGYGLSSRPKWEA----KGVGETEAFFVESLE 195
+QN P+++ HGY G ++ L LS +H ++A D LG+GLSSRPK+E V EAFFVESLE
Sbjct: 134 KQNETPPLVMLHGYANGCLYFYRNLVSLSQTHFPTIYALDMLGWGLSSRPKFETVPDNTSVESAEAFFVESLE 206
BLAST of mRNA_H-elongata_contig57308.13197.1 vs. uniprot
Match: A0A6P7RAA5_MUSCR (1-acylglycerol-3-phosphate O-acyltransferase ABHD5 isoform X3 n=6 Tax=Muroidea TaxID=337687 RepID=A0A6P7RAA5_MUSCR) HSP 1 Score: 57.4 bits (137), Expect = 4.890e-8 Identity = 29/67 (43.28%), Postives = 41/67 (61.19%), Query Frame = 1
Query: 7 QNPVILCHGYGMGAAAWHTVLKDLSASHHVFATDWLGYGLSSRPKWEAKGVGETEAFFVESLE--RC 201
+ P++L HG+G G W +DLS V+A D LG+G SSRP++++ E E FVES+E RC
Sbjct: 77 KTPLVLLHGFGGGLGLWALNFEDLSTDRPVYAFDLLGFGRSSRPRFDSDAE-EVENQFVESIEEWRC 142
BLAST of mRNA_H-elongata_contig57308.13197.1 vs. uniprot
Match: A0A6J0DQ50_PERMB (1-acylglycerol-3-phosphate O-acyltransferase ABHD5 isoform X2 n=1 Tax=Peromyscus maniculatus bairdii TaxID=230844 RepID=A0A6J0DQ50_PERMB) HSP 1 Score: 57.4 bits (137), Expect = 5.070e-8 Identity = 29/67 (43.28%), Postives = 41/67 (61.19%), Query Frame = 1
Query: 7 QNPVILCHGYGMGAAAWHTVLKDLSASHHVFATDWLGYGLSSRPKWEAKGVGETEAFFVESLE--RC 201
+ P++L HG+G G W +DLS V+A D LG+G SSRP++++ E E FVES+E RC
Sbjct: 9 KTPLVLLHGFGGGLGLWALNFEDLSTDRPVYAFDLLGFGRSSRPRFDSDAE-EVENQFVESIEEWRC 74
BLAST of mRNA_H-elongata_contig57308.13197.1 vs. uniprot
Match: G3H972_CRIGR (1-acylglycerol-3-phosphate O-acyltransferase ABHD5 n=1 Tax=Cricetulus griseus TaxID=10029 RepID=G3H972_CRIGR) HSP 1 Score: 57.4 bits (137), Expect = 5.410e-8 Identity = 29/67 (43.28%), Postives = 41/67 (61.19%), Query Frame = 1
Query: 7 QNPVILCHGYGMGAAAWHTVLKDLSASHHVFATDWLGYGLSSRPKWEAKGVGETEAFFVESLE--RC 201
+ P++L HG+G G W +DLS V+A D LG+G SSRP++++ E E FVES+E RC
Sbjct: 34 KTPLVLLHGFGGGLGLWALNFEDLSTDRPVYAFDLLGFGRSSRPRFDSDAE-EVENQFVESIEEWRC 99
BLAST of mRNA_H-elongata_contig57308.13197.1 vs. uniprot
Match: A0A8J1ZEV9_9DINO (Hypothetical protein (Fragment) n=1 Tax=Amoebophrya sp. A25 TaxID=1410381 RepID=A0A8J1ZEV9_9DINO) HSP 1 Score: 56.6 bits (135), Expect = 5.430e-8 Identity = 27/49 (55.10%), Postives = 31/49 (63.27%), Query Frame = 1
Query: 16 VILCHGYGMGAAAWHTVLKDLSAS---HHVFATDWLGYGLSSRPKWEAK 153
V+L HG+G+GA L+ LS H VFA DWLGYGLSSRP W K
Sbjct: 161 VVLWHGFGLGAGGCSGALRALSEQFPDHAVFACDWLGYGLSSRPSWLQK 209
BLAST of mRNA_H-elongata_contig57308.13197.1 vs. uniprot
Match: A0A7S1ALR5_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1ALR5_NOCSC) HSP 1 Score: 57.4 bits (137), Expect = 5.810e-8 Identity = 29/64 (45.31%), Postives = 41/64 (64.06%), Query Frame = 1
Query: 10 NPVILCHGYGMGAAAWHTVLKDLSA-SHHVFATDWLGYGLSSRPKWEAKG-VGETEAFFVESLE 195
+P++L HG+GMGAA+W L+ LS V + DW G G S+RP + +G V E+FFVE +E
Sbjct: 78 HPLVLVHGFGMGAASWSGSLEALSGCGRDVVSIDWPGSGRSTRPSFPLRGGVEACESFFVERIE 141 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig57308.13197.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig57308.13197.1 >prot_H-elongata_contig57308.13197.1 ID=prot_H-elongata_contig57308.13197.1|Name=mRNA_H-elongata_contig57308.13197.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=69bp LRQNPVILCHGYGMGAAAWHTVLKDLSASHHVFATDWLGYGLSSRPKWEAback to top mRNA from alignment at H-elongata_contig57308:3425..3631+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig57308.13197.1 ID=mRNA_H-elongata_contig57308.13197.1|Name=mRNA_H-elongata_contig57308.13197.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=207bp|location=Sequence derived from alignment at H-elongata_contig57308:3425..3631+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig57308:3425..3631+ >mRNA_H-elongata_contig57308.13197.1 ID=mRNA_H-elongata_contig57308.13197.1|Name=mRNA_H-elongata_contig57308.13197.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=414bp|location=Sequence derived from alignment at H-elongata_contig57308:3425..3631+ (Himanthalia elongata Himel1 dioecious)back to top |