mRNA_H-elongata_contig5725.13188.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig5725.13188.1
Unique NamemRNA_H-elongata_contig5725.13188.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig5725.13188.1 vs. uniprot
Match: D8LU76_ECTSI (ABC1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU76_ECTSI)

HSP 1 Score: 189 bits (480), Expect = 2.420e-54
Identity = 90/127 (70.87%), Postives = 109/127 (85.83%), Query Frame = 1 
Query:    1 ECLGCGNGIGAGQAVLNFSATQTCVGREAQESFMRDMDALFRDKCKGYHTNVDVGDILRGVLSCVRRHSVRVDMEYATLILNILCLDSMAKKAMLPTYNILDGAKMLLESNRIGRRLVGGIAVKAVL 381
            ECLG G+GI AGQAVL FS  QTCVG   Q +F+ +MD++F++KC+GYHTNVDVG+ILRGVL+CVRRHSVRVD+EYATLILNILCLD M+K  +LPTYNILDGA+ LLE+ ++GRRLVGG  VK +L
Sbjct:  370 ECLGSGDGIAAGQAVLQFSTKQTCVGEHEQAAFLAEMDSVFKEKCRGYHTNVDVGNILRGVLTCVRRHSVRVDVEYATLILNILCLDGMSK-VLLPTYNILDGAQSLLEAQKVGRRLVGGFGVKTIL 495
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BLAST of mRNA_H-elongata_contig5725.13188.1 vs. uniprot
Match: A0A7S2REP9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2REP9_9STRA)

HSP 1 Score: 131 bits (329), Expect = 4.280e-33
Identity = 69/128 (53.91%), Postives = 88/128 (68.75%), Query Frame = 1 
Query:    1 ECLGCGNGIGAGQAVLNFSATQTCVGREAQESFMRDMDALFRDKCKGYHTNVDVGDILRGVLSCVRRHSVRVDMEYATLILNILCLDSMAKKAMLPTYNILDGAKMLLESNRIGRRLVGG-IAVKAVL 381
            E +G G+G  A Q +L FS++QTCV    Q +F +DMD  FR  C GY TNVD+G +LRGVL  VRRH VRVD+ YATL++N LCLD MAK  +LP YN+LDG K LL ++R  +   GG +A+K  L
Sbjct:  446 EAIGEGDGREAAQHLLLFSSSQTCVSAAQQAAFTKDMDDYFRLNCHGYGTNVDLGSVLRGVLDLVRRHGVRVDVNYATLVMNALCLDGMAK-VLLPGYNVLDGGKALLRAHRRWKNAPGGSLAIKLAL 572
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BLAST of mRNA_H-elongata_contig5725.13188.1 vs. uniprot
Match: A0A061S8R0_9CHLO (AarF domain-containing kinase n=2 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061S8R0_9CHLO)

HSP 1 Score: 120 bits (301), Expect = 4.650e-31
Identity = 56/113 (49.56%), Postives = 83/113 (73.45%), Query Frame = 1 
Query:    1 ECLGCGNGIGAGQAVLNFSATQTCVGREAQESFMRDMDALFRDKCKGYHTNVDVGDILRGVLSCVRRHSVRVDMEYATLILNILCLDSMAKKAMLPTYNILDGAKMLLESNRI 339
            + +G GNG  A   +LNF+  QTC  RE   SF++DM+ LFR +C+GYHT VD+G+++RG L+ VR H VRVD  YATL++N+LC++ + ++ M P YNILD A+ +LE++R+
Sbjct:  125 QAIGAGNGEQAAGHLLNFTKEQTCSDRE---SFVKDMEELFRRRCRGYHTGVDIGEVVRGCLNVVREHRVRVDANYATLLVNVLCIEGLGRQLM-PEYNILDAARPMLEAHRL 233
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BLAST of mRNA_H-elongata_contig5725.13188.1 vs. uniprot
Match: A0A7S1VLP3_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VLP3_9STRA)

HSP 1 Score: 123 bits (308), Expect = 1.130e-30
Identity = 60/109 (55.05%), Postives = 82/109 (75.23%), Query Frame = 1 
Query:    4 CLGCGNGIGAGQAVLNFSATQTCVGREAQESFMRDMDALFRDKCKGYHTNVDVGDILRGVLSCVRRHSVRVDMEYATLILNILCLDSMAKKAMLPTYNILDGAKMLLES 330
            CLG GNG  AG+  L FS   T +  E +E+FM DM+ LF ++C+GY TNVDVG +LRGVLS +R+H VR+D  YATL++N+LC++S+A++   P+YN+LD AK LLES
Sbjct:  281 CLGSGNGRLAGEFALRFSIG-TALNGEEREAFMHDMENLFAERCRGYGTNVDVGHVLRGVLSLIRKHHVRIDANYATLVINVLCVESLARRVC-PSYNVLDAAKPLLES 387
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BLAST of mRNA_H-elongata_contig5725.13188.1 vs. uniprot
Match: A0A7S2MNQ9_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2MNQ9_9EUKA)

HSP 1 Score: 114 bits (285), Expect = 8.070e-30
Identity = 56/125 (44.80%), Postives = 85/125 (68.00%), Query Frame = 1 
Query:    7 LGCGNGIGAGQAVLNFSATQ-TCVGREAQESFMRDMDALFRDKCKGYHTNVDVGDILRGVLSCVRRHSVRVDMEYATLILNILCLDSMAKKAMLPTYNILDGAKMLLESNRIGRRLVGGIAVKAV 378
            +G G+GI A +A+L+F++ Q  C G E   +F  DMDALF+++C+G+ TNV+ G +LRG+L  VR+H V V+  Y TL++N+LCL+ MA   +LP YN+LD A+ LL  +R+  R +   A+  V
Sbjct:    2 MGAGDGIAAARAILHFASRQEVCTGGERVRAFATDMDALFKERCRGFGTNVEFGAVLRGILGLVRKHRVTVEANYMTLVMNVLCLEGMAS-VLLPGYNVLDAARPLLAIHRLVPRPIFAAAMPTV 125
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BLAST of mRNA_H-elongata_contig5725.13188.1 vs. uniprot
Match: A0A7S3Q8V7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q8V7_9STRA)

HSP 1 Score: 115 bits (287), Expect = 1.450e-29
Identity = 59/110 (53.64%), Postives = 81/110 (73.64%), Query Frame = 1 
Query:    7 LGCGNGIGAGQAVLNFSATQTCVGREAQESFMRDMDALFRDKCKGYHTNVDVGDILRGVLSCVRRHSVRVDMEYATLILNILCLDSMAKKAMLPTYNILDGAKMLLESNR 336
            LG G+G  A +AVL FS  +  +  E +E+F +DM ALFR KC+GY TNVDVG++LRGVL  ++ H VR+   YATL++N LC++S+AK+ + P+YNILD AK LL S+R
Sbjct:   17 LGAGDGRTAAEAVLRFS-DECVLTEEEKEAFTKDMIALFRQKCRGYGTNVDVGEVLRGVLEKIKIHQVRIGANYATLVINALCMESLAKR-ICPSYNILDAAKPLLSSHR 124
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BLAST of mRNA_H-elongata_contig5725.13188.1 vs. uniprot
Match: A0A7S3Y217_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y217_HETAK)

HSP 1 Score: 116 bits (291), Expect = 6.650e-28
Identity = 61/122 (50.00%), Postives = 79/122 (64.75%), Query Frame = 1 
Query:   16 GNGIGAGQAVLNFSATQTCVGREAQESFMRDMDALFRDKCKGYHTNVDVGDILRGVLSCVRRHSVRVDMEYATLILNILCLDSMAKKAMLPTYNILDGAKMLLESNRIGRRLVGGIAVKAVL 381
            G+G  AG+ +L FSA QTC G  A   F+RD+  LF   C+GY T   VG++LR  L+ VRRH VRVD  YATLILNILCLD +A+  ++P YN++DGA  LL  +   +RL GG     +L
Sbjct:  415 GDGARAGRCLLRFSAAQTCRGEVATGRFVRDVQLLFARTCRGYGTGTQVGEVLRATLALVRRHGVRVDANYATLILNILCLDGLAQ-GLVPEYNVVDGAHALLAFHDRVKRLPGGARAARLL 535
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BLAST of mRNA_H-elongata_contig5725.13188.1 vs. uniprot
Match: X0UFA0_9ZZZZ (ABC1 domain-containing protein (Fragment) n=1 Tax=marine sediment metagenome TaxID=412755 RepID=X0UFA0_9ZZZZ)

HSP 1 Score: 110 bits (275), Expect = 2.000e-27
Identity = 52/110 (47.27%), Postives = 78/110 (70.91%), Query Frame = 1 
Query:    7 LGCGNGIGAGQAVLNFSATQTCVGREAQESFMRDMDALFRDKCKGYHTNVDVGDILRGVLSCVRRHSVRVDMEYATLILNILCLDSMAKKAMLPTYNILDGAKMLLESNR 336
            +G G+G  A  +VL FS  +  + +E QE+F++DM + F + C+GY T+VDVG++LRGVL  ++ H +RVD  YATL++N LC++ +AK+   P+YN+LD AK LL S R
Sbjct:  117 MGAGDGRSAADSVLKFSEERDYLTKEQQEAFIQDMISYFDESCRGYCTDVDVGEVLRGVLGLIKTHHIRVDANYATLVVNALCIEGLAKRVC-PSYNVLDAAKPLLSSYR 225
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BLAST of mRNA_H-elongata_contig5725.13188.1 vs. uniprot
Match: A0A7S2MI66_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MI66_9STRA)

HSP 1 Score: 114 bits (284), Expect = 5.230e-27
Identity = 57/133 (42.86%), Postives = 86/133 (64.66%), Query Frame = 1 
Query:    1 ECLGCGNGIGAGQAVLNFSATQTCVGREAQESFMRDMDALFRDKCKGYHTNVDVGDILRGVLSCVRRHSVRVDMEYATLILNILCLDSMAKKAMLPTYNILDGAKMLLESN----------RIGRRLVGGIAV 369
            + +G G+GI AG+ VL+FS  Q+C   E + +F  DMDA FR  C+GY   +D+G +L+G+L  VR H VR+D+ YATL++N LCLD +AK+ +LP +N++D +K LL ++          R GR  V  +A+
Sbjct:  381 QAIGEGDGIKAGRHVLDFSEFQSCASAECRHAFQEDMDAFFRTHCRGYGQGIDLGVVLKGILRLVRIHRVRIDVNYATLVMNALCLDGLAKQ-ILPGHNVMDASKFLLRAHGSLGEGLTRTRFGRWFVDQVAL 512
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BLAST of mRNA_H-elongata_contig5725.13188.1 vs. uniprot
Match: A0A7S4N161_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4N161_9EUKA)

HSP 1 Score: 106 bits (264), Expect = 2.760e-26
Identity = 52/112 (46.43%), Postives = 75/112 (66.96%), Query Frame = 1 
Query:    1 ECLGCGNGIGAGQAVLNFSATQTCVGREAQESFMRDMDALFRDKCKGYHTNVDVGDILRGVLSCVRRHSVRVDMEYATLILNILCLDSMAKKAMLPTYNILDGAKMLLESNR 336
               G G+G  A + VL F+  QTC   EA+ +F  DM ALF ++C+G+ T V+ G +LRGVLS  R H V +D  Y TL++N+LCL+ MA+ A++P YN+LD A+ LL ++R
Sbjct:   45 HAFGAGDGRRAARVVLRFAEEQTCETTEARRAFEDDMHALFLERCRGFGTAVEFGPVLRGVLSLCRTHRVALDANYMTLVMNVLCLEGMAR-ALMPEYNVLDAAQPLLAAHR 155
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5725.13188.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LU76_ECTSI2.420e-5470.87ABC1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A7S2REP9_9STRA4.280e-3353.91Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A061S8R0_9CHLO4.650e-3149.56AarF domain-containing kinase n=2 Tax=Tetraselmis ... [more]
A0A7S1VLP3_9STRA1.130e-3055.05Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A7S2MNQ9_9EUKA8.070e-3044.80Hypothetical protein n=1 Tax=Haptolina brevifila T... [more]
A0A7S3Q8V7_9STRA1.450e-2953.64Hypothetical protein (Fragment) n=1 Tax=Chaetocero... [more]
A0A7S3Y217_HETAK6.650e-2850.00Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
X0UFA0_9ZZZZ2.000e-2747.27ABC1 domain-containing protein (Fragment) n=1 Tax=... [more]
A0A7S2MI66_9STRA5.230e-2742.86Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S4N161_9EUKA2.760e-2646.43Hypothetical protein n=1 Tax=Prymnesium polylepis ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig5725contigH-elongata_contig5725:4653..11226 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score186.0
Seed ortholog evalue1.1e-44
Seed eggNOG ortholog2880.D8LU76
KEGG koko:K08869
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0031090,GO:0031966,GO:0031967,GO:0031975,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464
EggNOG free text desc.kinase activity
EggNOG OGsCOG0661@1,KOG1236@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01001
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionUbiB domain
Ec32 orthologEc-16_000510.1
Exons3
Model size381
Cds size381
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig5725.13188.1prot_H-elongata_contig5725.13188.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig5725 4653..11226 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930930.6498528-CDS-H-elongata_contig5725:4652..48021622930930.6498528-CDS-H-elongata_contig5725:4652..4802Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5725 4653..4802 +
1691679629.429512-CDS-H-elongata_contig5725:4652..48021691679629.429512-CDS-H-elongata_contig5725:4652..4802Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5725 4653..4802 +
1622930930.6652732-CDS-H-elongata_contig5725:9667..97901622930930.6652732-CDS-H-elongata_contig5725:9667..9790Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5725 9668..9790 +
1691679629.4422288-CDS-H-elongata_contig5725:9667..97901691679629.4422288-CDS-H-elongata_contig5725:9667..9790Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5725 9668..9790 +
1622930930.6853685-CDS-H-elongata_contig5725:11118..112261622930930.6853685-CDS-H-elongata_contig5725:11118..11226Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5725 11119..11226 +
1691679629.4610996-CDS-H-elongata_contig5725:11118..112261691679629.4610996-CDS-H-elongata_contig5725:11118..11226Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5725 11119..11226 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig5725.13188.1

>prot_H-elongata_contig5725.13188.1 ID=prot_H-elongata_contig5725.13188.1|Name=mRNA_H-elongata_contig5725.13188.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=127bp
ECLGCGNGIGAGQAVLNFSATQTCVGREAQESFMRDMDALFRDKCKGYHT
NVDVGDILRGVLSCVRRHSVRVDMEYATLILNILCLDSMAKKAMLPTYNI
LDGAKMLLESNRIGRRLVGGIAVKAVL
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mRNA from alignment at H-elongata_contig5725:4653..11226+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig5725.13188.1 ID=mRNA_H-elongata_contig5725.13188.1|Name=mRNA_H-elongata_contig5725.13188.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=6574bp|location=Sequence derived from alignment at H-elongata_contig5725:4653..11226+ (Himanthalia elongata Himel1 dioecious)
GAGTGCCTGGGGTGCGGCAACGGCATCGGCGCCGGTCAAGCTGTGCTCAA
CTTCTCGGCCACCCAGACGTGCGTCGGCCGAGAGGCTCAAGAATCGTTTA
TGAGGGACATGGATGCGCTTTTTCGGGACAAGTGCAAGGGCTACCACACG
GTGGGTGTTAGTTCTTTGTTATTAGTAGTCTTCAGTATTAGTCTATATTA
TTATTTTCGAGTCGAATCAGTAGTCTTTGGGACAGGCCTCGTGACCTGAT
TGACTCCCTGTGAACGTGTTTGCATATTTTGGTTCGCTTTTTGTGTTTTA
GGTCCCCAAAAGACTTTGGTGGATTTCACGAGTTACAGCTGTACGACTGG
GATTTAATCAATTACTCAACATGCCCGTTTCCTTTTCTTACAAACGAGTG
GGCGAAAAATAACAAATAACTTAAGTCTCAGTAGGTTTTGAATCGCTACT
TTTCTGCCCTAACTTTTACCCTAACCCTTAACCCTAACCTTTACCCTTTA
AATATAATTAGTTCTCGAAAAAAACTTATAAACTCATTCAACCCCTTCGA
ACATACATCCACACCTTCTTTTCGCCCTTGGAGGTGAGTGAAGTCAAGCG
CTGGTGTGGTATTAAATTAGTATATTATTACATTATTACATTAGTACGGC
ATTACAGTGTAGAACAGACAACAAGAAGACAAAAAAGTAGTGATCATGAA
ACGCTCACATCTACAGTACGTCCAATTGGGTAAATTAACAGATTATTCTA
AGCTATAGTAGTGGTATAAACCTGGAGATATTTTTTTCGGGCAATGGGGT
TAGATATATAACTATGCGGGAGGAGTATGCGTCTAGTTTTAAGGATAATC
ATAATCCTTGGTCGTCATTTTTATCTTGTATTTTAGGGGAGAAATTACAG
GGGACCAGGATGGTTGATTTACTGAATTCTCACATAAGTTGATGTCAAAA
TCGAACCCGGGGTCAAAAAGTAAGAAAAACACCATACGGAAGGAAAAACA
AAAGGAAACGGCAATGATGCATAATCTAATACTCGGAAAAAAAGCGATAT
CTTCAAAGAAAAAGAAACACAAAAAGAAAACACACATAGTTCTTGACGAA
CTGCGTGTGGCTGTCGGGATGCGGGCCTATCGGAGAATGATTGAACGAAG
ACCCACGGGCTCAATGTTCAGTGAAGGCAAAAGGCGAAAACGAAAGAAAA
ACAAGATAAAGAAAAAAACTAGCGCCAGAAAAAGACAGTAGACTTTTTCG
GAAATGTTTTTTGTTGTCAGATTAATATTTTGCCCGGGCTTTTCAAAAAT
AGAGCCGCCAACGGTTTATTATTTCCGCGCAAATCGAGAATATAATATTG
ATTCTAGGTTTTGTTCGCTTTTGAACACCCAAAGCCTGATACATCTAGTT
ATTTTTCATTTAGTGGTAGATTCGAGCGGAAACATCAAAAACACAATCTT
CTGGCCTCACAAATGGAGTCGAGCGGGCATCCTCTTAGGACCTTATGCCC
GTCCCAGAAGGCTCGGGAAGCAGGCTTTGTCATATCACCGAAAGTACCGG
CCTCACAGGCTGCTGGTGGTGCTCCTCGCTCACACTTGGCATCCGAAGGC
ACTACTGTTGTAGAGAGCCTTTTTTTGAAGATATGGTCCACAGAGCTAAG
GAGAAAAAGCAAGAGGTGTTTCCACGCTTGACGACAGGAGAGGGTAGCCA
GTGCCAAATGGGAAATAATGACGAAGTAGAGGTAGGTAGTTGCTGCCCCT
GTCTCAAAATGGCCCCCGAAGGCGACGAATGTGGAGGTAGTTGCTGCCTC
AGCCTCAAGGTGGCCCCCGAAGGCTACGAAGAAATGGTCTAGAGGATCTT
GGGCTGAATTGCTCCAGCTCGGTAAGAACAAACATATATATGTCGCCCAA
AAACTAGCGGGTACAACAACAGTGTAGAGAAGATGCAGCCTGCAAGAGTC
GGCGGTTTGTGACGCGGTGTTGCAGTCGTGATTGTATGCTGCGGTGCGGT
TGTGTTGTGTTGAAAAAAATATAACACGATTTACTATGCTATAAGGGATA
TAACCAATCGCAAAAAAAGCACTCTGTGGAAATTTTTAGTATCGTGCCAG
CAAGCATTTTGCAGCTGGAGAAACGTCAGCGCACGGGCCTTGCAATTAAC
CCTCTCTTCGATTCGTACGCGTGTCATGTTTTGAGTGCAATAATAGCCCT
AGCCGTCTCTTCGCGGGCCGAGCGAGGGGCATATCAATTAGTATTTAGCG
TTTATGGGGGGGACAGGTGGTAAAACGCGGAAACTCTGCACGCCAATTAG
CGCGTTGCAGGATGCTACGTCAGCCACGTCATTTTGTTCATCACGCCGCA
GACCAAACCCCTAGTCTTTGCTTGGCCGAAAAAAAGTTCTGAAAACAAAG
CCCGGTGAAAAGCAGGACCAAATCTCGATACTTTTCCAAAACTCTATAAT
ATGGCATCTGCAAGCAAAAAAACACCCAGGGGATAAGTTCGCGCCACTCG
TGGCTAATCAACTATGACGAGCAAACCAGCACGAGCTCGCTTATATTGGG
CTATCATATCCTTGGTCACGTTCGGACATCCTAGTGCATGCCGTATTCCA
GTCCTGACTTTCTCTGCAGCGGTCCAATTCTTCATGAAACGTTCCGCCCC
TTGTTCCGCCGTCTTTCGCCACTCCTTCTCGTCCTGGGCTGCAATCGTCC
ACTGGTCGGCGTTTATACCGAAAGCTTTAAGGTTTTCAAGAGGACACCTC
ATCCACTCTTTTTCTCTCCTCCCACGCAACCCGCGCCTCCCACGATTTCT
CCGAACATCACGCACTTCGGCAGTTTCGTGTCGTTCATGCGCGCCACGAA
TCCCGCCAACAGGATCCGCCTCCTGCGCATGATCGTCTCGTTGCTCTCAC
TTTCCGTCTTCATTAGGTTGTCTAGATAGGAGATCGGGTGATCGGTGCGA
TTGCTCTTTCGCCAACCGATGCAGCGAGTTAAGAAGCTGTGGTGGGCTCG
GCGCAGCGTGTTGTAGTGGCTCGCGCGCGGGCTCCATGTGACGCAGCCGT
ACATCATTGTCTCGAGTACCTCGGCTTTCAGCATCCGGAATTTAAGCTCC
AGGGGGGCGCTGGGTCGGTCGTACAGTTCGAGGGTTTACTCCTGGAATCG
GCACCATGCTTTGAATATGCGCCGATTGACCTCGATGGACAGGTCTTAGT
TTATAATAATTTATATTGATAGGTAAAAACTGCCCACAGGTACAGGGGAT
TAGGTATGGTAGCTACGATATATCTCTATTTTATGGTGATATAGATTGTT
TGATTGTTTGATTGATTGGTTGAATCTTCACATAAGCTGATATCAAAATC
CAGCCCGTGATCACAAGGTAGAAAGCCACTATCCGGAAGGAAAAAGCGTT
CAACGTACTCGTCAATACAAAATGAAATGGTAATGGTGCATAATCATCCC
TACGTTAGGCCATACGTTCCCAGAAAGGAAGCTACGTTTTTCTAATAGCT
ATATCCGAAAATTAATCGATATATATTTACGATGCAACCATGTGCTTCCC
TTATCTACACCCTCTCAAAACTGGCTTTTATTTAGACTGAGTAATGTATC
CCACAGCTCATAGAGTCATTTATTCCCCCCTCCCGCACCCCTCTTCTTAT
ACAGTCCATTCTCGAAGATTTGGTTTTGGCGTCCTCACATGAAGAATAAT
GTAAAGTGTACGGGATAATCATGGGATATCATCCCTGACATTATTCCGGG
ATAATAATGGGATCCCCCGACGAACTCACTATTGGGGAACACGATTCATC
ACGTGCGACGATTTTGTCCTCGAAGGTAGTAATGTACATATTCGAACCTG
ACGATAGTTGGTCCCCTGGACTGCACCTCTCACGGCGCTAAGAAGGTGTG
TTCGGAGGGTTGGAATGAGTTCAAGGCGTTTAAAATAATACTGCTCGGAA
AAAGCAACATCTCCATAGAAAAAGAAATTAACATAAAAAAGAAAACACAC
ACAGTTGTTAACGAACTGCTTTTGGCTGTCGGTACGAGGACCTATCTGAG
AATAACTGAACGAAGAGCAACGGGTTCAATGAAAGCAAAAAAAGACGAAA
ACGAAAGAATAATAAGACAAAGAAAAAACGTAACGCCAGAGAAGGGGAAT
ATGACATCGGCAAGCAAATTATCGATCACTGATCTGTCGACACGATGGGG
AAGACAGAGCAACAATATGTGGGAGGGGCAATATAACGCAAACATACGCC
TTCGACGAAGACTGGACCAAACCTTCAACCAAGCCACCGAAGAATTCCAG
ACCAAAACTCGACATCACATCACCTGTTGCTTTACCGAAGGCAAAGAGTA
ACGAAAGGTCAATATGTATGTATAGAGCGAGTTAGAAGCAAGTTGGCAGA
GGATGCCAGTGTCACCAGTCACATGTAGTATAACTCTATTCCTCTACTCG
ATTAGGAGGACTAAAGTCGAACAAAAGCCTGGCCAGGGCTTGAAGCTTGC
AAGGGCTAAGAAAACAATGTTGATGCACTTGCTTTCAAAGCATATTTTGC
GACCAACAACTGCTGTGGAAATATTTTAAATATAGAGCTATAGCTCTACG
TGTACTTAAGAAAATATGCTTCAAATAATATGTACGGTAGGCAGGAATAT
CGAAATAGGACTGTTTAATATCCCAGGCACTAGGGAGTGGACTAAGCTGG
CCCCATTTCTTTTCCCTGAAAGCTGAATAACGCCCCGCTTGATCAACGCT
CTTCTCCCCCTCATATTTTCTCATTGCCTTAAGATATTTTTGGTTGATGT
CTATTTCAATTTTCTCTTAGGTTTTCCTCAACTTTCTCTCAATTCCGACA
TTTTTCTCTTTGATTCTTTTTATCATTTTCCCTCCCTTTTCCTCTCAATT
TTACGTCATTTTTTCTCTTTAACGTTTTTTTTAACTCTTTTCTTCCCGTT
TTTCCATTCCCCTTTCTTCCCTTTCCTGTCTTCCCTTCCCTTCCCTTCCC
TTGGTTGCCGAAAAGAACGTGGACGTGGGAGATATATTAAGAGGGGTCCT
GTCCTGCGTGAGGCGCCATTCAGTCAGGGTCGACATGGAGTACGCCACTC
TCATCTTGAACATCCTCTGCCTGGACAGCATGGCCAAGGTGTCGCAGACA
TAAACGCTTGAAGCAGCGTTACATTACATCACAGCGCGCTTCAAATTATA
GTCTATGCTAAAACTGTGGTTTCACCTGGTTTCCAAAGTTGAACATTTAT
AAATATATAGATATATGCAGTACCTGGTATGTATTATTCTAGCAGGTACA
CCCTTTACTATACCCTACTCAGCTCTAGTATGTTGGAGTCATGTACTGTA
CTCGGTCTACGCTTTTCCTCCTCCTCCTCCTCCTCCTCTTTTCTTCCTCT
TCGTCTCAGTGGTTCAAGTGTTGTTTGTATTATTAATAGTTTATTAATAT
GTTTGTGTTAGCGTGTTTGTGTAGCAATCCTGACTTCGAATCTCGGGGGG
AAAGCACATTTATTCTAGCGGAAAGCGTTAGGACGTGATCAAATAAAGGT
GAATGATTGGCTTAGGTCTAGAAAGTAGTGTTGTAGGGGTAGAGGTAGAC
TTGACTTAGAGGTACCGAGGTACCGATCTCGCATCGCGATTAAAAAAGCG
TAGAATTAATAACATGGGCGTGAACTGGGAGAGATAGTTGGCAGTAAATA
GTGGTAAGATGGGTCCCTTAAAAGAGCTAGTCGAGTAGTCCAGTAGATGG
GTTGGGCAGCGTTAAGGCAACTGGGATTGTTGGACCAACTTATAATATGA
ATAGTAGGCCGTTAAATGGCATTATATAGTGTACATTATATACTATACAC
TATACACTATACACCATACACTATACACCATACACTATACACTATACACC
ATACACTATACACTATACACCATACACTAGACACTATAAACTATACACTA
TACACTATACACTATACACCATACACTATACACTATAAACTATACACTAT
ACACTATACACTATACTACACTATACACTATACACCATACTATACACTAT
ACACCATACACTACACTATATAATATACACTATACACTATACTATACACC
ATACACTATACACTATATCGTATATTATATCTAGTATACCGTATACTCTT
AACTCGCTAATAGTATAACCGATTGTACAAGAAACCATTCTGTTTTTCCC
TGAATTTTTGCAGAAAGCACGACTAAGGTGAGCAACGCACCAACAATAAC
AAATAACCACTGTTACAACCTGCGTGCGTCATAGACCGTGGACAGCATGG
CCGAGGTCATGGCTGAGGTGCGTCACACCGACAAGATATAGCTCTAAGCT
CTTTAGTACATTGTACATGTGTCATACCTCAGTATGCTACAAATCACCGA
CCGCTATATCGTTTTGGATCTGTTCCTCAATGTTGTATACAACGCATATC
ATTTGCTACGACGGAGAAGGCCATGCTGCCAACGTACAATATACTGGACG
GAGCAAAGATGCTGCTCGAGTCTAACAGGATCGGCAGGAGGCTGGTGGGA
GGGATCGCCGTCAAGGCCGTTTTG
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Coding sequence (CDS) from alignment at H-elongata_contig5725:4653..11226+

>mRNA_H-elongata_contig5725.13188.1 ID=mRNA_H-elongata_contig5725.13188.1|Name=mRNA_H-elongata_contig5725.13188.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=762bp|location=Sequence derived from alignment at H-elongata_contig5725:4653..11226+ (Himanthalia elongata Himel1 dioecious)
GAGTGCCTGGGGTGCGGCAACGGCATCGGCGCCGGTCAAGCTGTGCTCAA
CTTCTCGGCCACCCAGACGTGCGTCGGCCGAGAGGCTCAAGAATCGTTTA
TGAGGGACATGGATGCGCTTTTTCGGGACAAGTGCAAGGGCTACCACACG
GAGTGCCTGGGGTGCGGCAACGGCATCGGCGCCGGTCAAGCTGTGCTCAA
CTTCTCGGCCACCCAGACGTGCGTCGGCCGAGAGGCTCAAGAATCGTTTA
TGAGGGACATGGATGCGCTTTTTCGGGACAAGTGCAAGGGCTACCACACG
AACGTGGACGTGGGAGATATATTAAGAGGGGTCCTGTCCTGCGTGAGGCG
CCATTCAGTCAGGGTCGACATGGAGTACGCCACTCTCATCTTGAACATCC
TCTGCCTGGACAGCATGGCCAAGAACGTGGACGTGGGAGATATATTAAGA
GGGGTCCTGTCCTGCGTGAGGCGCCATTCAGTCAGGGTCGACATGGAGTA
CGCCACTCTCATCTTGAACATCCTCTGCCTGGACAGCATGGCCAAGAAGG
CCATGCTGCCAACGTACAATATACTGGACGGAGCAAAGATGCTGCTCGAG
TCTAACAGGATCGGCAGGAGGCTGGTGGGAGGGATCGCCGTCAAGGCCGT
TTTGAAGGCCATGCTGCCAACGTACAATATACTGGACGGAGCAAAGATGC
TGCTCGAGTCTAACAGGATCGGCAGGAGGCTGGTGGGAGGGATCGCCGTC
AAGGCCGTTTTG
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