mRNA_H-elongata_contig57222.13183.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig57222.13183.1 vs. uniprot
Match: D7G8D7_ECTSI (ARL1, ARF-like Ras superfamily GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8D7_ECTSI) HSP 1 Score: 224 bits (571), Expect = 3.280e-73 Identity = 110/114 (96.49%), Postives = 114/114 (100.00%), Query Frame = 1
Query: 1 MGLILSRVFQALFGSKEVRILILGLDNAGKTTILYRLQNEADDNIQTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIVFVVDSSDRERMSIAKQELLAMLE 342
MG++LSRVFQALFGSKEVRILILGLDNAGKTTILYRLQNEADDNIQTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIVFVVDSSDRERM+IAKQEL+AMLE
Sbjct: 1 MGIVLSRVFQALFGSKEVRILILGLDNAGKTTILYRLQNEADDNIQTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIVFVVDSSDRERMAIAKQELMAMLE 114
BLAST of mRNA_H-elongata_contig57222.13183.1 vs. uniprot
Match: B8CE86_THAPS (Adp-ribosylation factor 1 n=15 Tax=Bacillariophyta TaxID=2836 RepID=B8CE86_THAPS) HSP 1 Score: 208 bits (529), Expect = 8.420e-67 Identity = 101/114 (88.60%), Postives = 110/114 (96.49%), Query Frame = 1
Query: 1 MGLILSRVFQALFGSKEVRILILGLDNAGKTTILYRLQNEADDNIQTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIVFVVDSSDRERMSIAKQELLAMLE 342
MG+I+SRVF++LFGSKEVRILILGLDNAGKTTILYRLQNE+D+ +QTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIVFVVDS+D ERMS+AK EL AMLE
Sbjct: 1 MGIIMSRVFESLFGSKEVRILILGLDNAGKTTILYRLQNESDEAVQTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIVFVVDSADVERMSVAKGELAAMLE 114
BLAST of mRNA_H-elongata_contig57222.13183.1 vs. uniprot
Match: A0A836CD21_9STRA (ARL1, ARF-like ras superfamily GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CD21_9STRA) HSP 1 Score: 207 bits (526), Expect = 2.330e-66 Identity = 100/114 (87.72%), Postives = 110/114 (96.49%), Query Frame = 1
Query: 1 MGLILSRVFQALFGSKEVRILILGLDNAGKTTILYRLQNEADDNIQTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIVFVVDSSDRERMSIAKQELLAMLE 342
MG++LS+VFQA+FGSKEVRILILGLDNAGKTTIL RLQNEA+++IQTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAI+FVVDS+D ER+ IAKQEL AMLE
Sbjct: 1 MGILLSKVFQAVFGSKEVRILILGLDNAGKTTILLRLQNEAEEDIQTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIIFVVDSADTERLGIAKQELAAMLE 114
BLAST of mRNA_H-elongata_contig57222.13183.1 vs. uniprot
Match: A0A7S2DCF0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DCF0_9STRA) HSP 1 Score: 205 bits (521), Expect = 5.770e-66 Identity = 97/114 (85.09%), Postives = 109/114 (95.61%), Query Frame = 1
Query: 1 MGLILSRVFQALFGSKEVRILILGLDNAGKTTILYRLQNEADDNIQTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIVFVVDSSDRERMSIAKQELLAMLE 342
MG+I SRVFQ++FGSKEVRILILGLDNAGKTTILY+LQNE D+ I TIPTIGFNVETL+YKNIKFQVWDLGGQTSIRPYWRCYYPNTDAI+FVVDS+DRER+++A+QEL AMLE
Sbjct: 1 MGIIFSRVFQSIFGSKEVRILILGLDNAGKTTILYKLQNETDEEINTIPTIGFNVETLKYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIIFVVDSADRERLNVAQQELQAMLE 114
BLAST of mRNA_H-elongata_contig57222.13183.1 vs. uniprot
Match: A0A6U1B3M7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A6U1B3M7_9STRA) HSP 1 Score: 206 bits (525), Expect = 8.980e-66 Identity = 97/114 (85.09%), Postives = 110/114 (96.49%), Query Frame = 1
Query: 1 MGLILSRVFQALFGSKEVRILILGLDNAGKTTILYRLQNEADDNIQTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIVFVVDSSDRERMSIAKQELLAMLE 342
MG+ SR+FQ +FGSKEVRILILGLDNAGKTTILYRLQNE+D++IQTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAI+FVVDS+D+ER+++A+QEL AMLE
Sbjct: 32 MGIFFSRIFQRIFGSKEVRILILGLDNAGKTTILYRLQNESDEDIQTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIIFVVDSADKERLNVAQQELQAMLE 145
BLAST of mRNA_H-elongata_contig57222.13183.1 vs. uniprot
Match: A0A7S2DEW5_9STRA (Hypothetical protein n=2 Tax=Dictyochophyceae TaxID=39119 RepID=A0A7S2DEW5_9STRA) HSP 1 Score: 205 bits (521), Expect = 1.350e-65 Identity = 97/114 (85.09%), Postives = 109/114 (95.61%), Query Frame = 1
Query: 1 MGLILSRVFQALFGSKEVRILILGLDNAGKTTILYRLQNEADDNIQTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIVFVVDSSDRERMSIAKQELLAMLE 342
MG+I SRVFQ++FGSKEVRILILGLDNAGKTTILY+LQNE D+ I TIPTIGFNVETL+YKNIKFQVWDLGGQTSIRPYWRCYYPNTDAI+FVVDS+DRER+++A+QEL AMLE
Sbjct: 1 MGIIFSRVFQSIFGSKEVRILILGLDNAGKTTILYKLQNETDEEINTIPTIGFNVETLKYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIIFVVDSADRERLNVAQQELQAMLE 114
BLAST of mRNA_H-elongata_contig57222.13183.1 vs. uniprot
Match: F0YGB1_AURAN (Uncharacterized protein n=2 Tax=Pelagomonadales TaxID=54409 RepID=F0YGB1_AURAN) HSP 1 Score: 204 bits (518), Expect = 3.730e-65 Identity = 99/115 (86.09%), Postives = 109/115 (94.78%), Query Frame = 1
Query: 1 MGLILSRVFQALFGSKEVRILILGLDNAGKTTILYRLQNEADDN-IQTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIVFVVDSSDRERMSIAKQELLAMLE 342
MG++ SRVFQALFGSKEVRILILGLDNAGKTTILY+LQNE DD I TIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAI+FVVDS+D+ER+++A+QEL AMLE
Sbjct: 1 MGILFSRVFQALFGSKEVRILILGLDNAGKTTILYKLQNETDDEEIMTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIIFVVDSADKERLAVARQELQAMLE 115
BLAST of mRNA_H-elongata_contig57222.13183.1 vs. uniprot
Match: A0A1E7FFD0_9STRA (Arl1-family small GTPase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FFD0_9STRA) HSP 1 Score: 203 bits (517), Expect = 5.470e-65 Identity = 97/114 (85.09%), Postives = 107/114 (93.86%), Query Frame = 1
Query: 1 MGLILSRVFQALFGSKEVRILILGLDNAGKTTILYRLQNEADDNIQTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIVFVVDSSDRERMSIAKQELLAMLE 342
MG++ S+VF+ LFGSKEVRILILGLDNAGKTTILYRLQNE+D+ +QTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAI+FVVDS+D ERM +AK EL AMLE
Sbjct: 1 MGILFSKVFETLFGSKEVRILILGLDNAGKTTILYRLQNESDEAVQTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIIFVVDSADAERMPVAKGELAAMLE 114
BLAST of mRNA_H-elongata_contig57222.13183.1 vs. uniprot
Match: A0A7S3DQ25_9STRA (Hypothetical protein n=2 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DQ25_9STRA) HSP 1 Score: 204 bits (518), Expect = 2.150e-64 Identity = 97/114 (85.09%), Postives = 109/114 (95.61%), Query Frame = 1
Query: 1 MGLILSRVFQALFGSKEVRILILGLDNAGKTTILYRLQNEADDNIQTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIVFVVDSSDRERMSIAKQELLAMLE 342
MG+++SR+F++LFGSKEVRILILGLDNAGKTTILYRLQNE D+ +QTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAI+FVVDS+D ERMS+A+ EL AMLE
Sbjct: 54 MGILMSRLFESLFGSKEVRILILGLDNAGKTTILYRLQNEGDEVVQTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIIFVVDSADIERMSVARGELTAMLE 167
BLAST of mRNA_H-elongata_contig57222.13183.1 vs. uniprot
Match: A0A6S9DTD2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9DTD2_HETAK) HSP 1 Score: 199 bits (505), Expect = 3.550e-63 Identity = 94/114 (82.46%), Postives = 107/114 (93.86%), Query Frame = 1
Query: 1 MGLILSRVFQALFGSKEVRILILGLDNAGKTTILYRLQNEADDNIQTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIVFVVDSSDRERMSIAKQELLAMLE 342
MG+ S++F +LFGSKEVRILILGLDNAGKTTILYRLQN++D+ IQT+PTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAI+FVVDS+D ER+ +A+QEL AMLE
Sbjct: 1 MGIFFSQLFNSLFGSKEVRILILGLDNAGKTTILYRLQNDSDEVIQTVPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIIFVVDSADAERVHVARQELSAMLE 114 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig57222.13183.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig57222.13183.1 >prot_H-elongata_contig57222.13183.1 ID=prot_H-elongata_contig57222.13183.1|Name=mRNA_H-elongata_contig57222.13183.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=114bp MGLILSRVFQALFGSKEVRILILGLDNAGKTTILYRLQNEADDNIQTIPTback to top mRNA from alignment at H-elongata_contig57222:763..1883+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig57222.13183.1 ID=mRNA_H-elongata_contig57222.13183.1|Name=mRNA_H-elongata_contig57222.13183.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1121bp|location=Sequence derived from alignment at H-elongata_contig57222:763..1883+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig57222:763..1883+ >mRNA_H-elongata_contig57222.13183.1 ID=mRNA_H-elongata_contig57222.13183.1|Name=mRNA_H-elongata_contig57222.13183.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=684bp|location=Sequence derived from alignment at H-elongata_contig57222:763..1883+ (Himanthalia elongata Himel1 dioecious)back to top |