mRNA_H-elongata_contig57209.13178.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig57209.13178.1 vs. uniprot
Match: D7FTG3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTG3_ECTSI) HSP 1 Score: 261 bits (666), Expect = 1.120e-78 Identity = 133/203 (65.52%), Postives = 161/203 (79.31%), Query Frame = 1
Query: 1 QNIAQLLQQRRVGAIPASSGGRVSGGHTNARSTSAGMRGWDFLDPCSGSGGGKGLLRGSSSFGFRRSVGEHPSIIKRLRHTATLRGHDQCVNRLCWNETGTTIASVSDDTTVCLFDASTATRKMQFQTGHTRNILGVRILPCTNGQLIVTGAMDKEVRLHMAPFSPEELQVEVFKCHESRINAIEVEPGNPFLFWSASEDGTV 609
QN+AQLL++RR G IPAS+GG V GG T+AR+TSA +RG + G+GG + +FGFRR++G+HPS+I+RLRHTATLRGH CVNRLCWN+ GT IAS SDDTTVCLFDA++ R +QFQTGH RNIL V+ LPCTN Q++VTGAMD EVRLH APFS EL E F CH+ R++A+EVEPGNPF+FWSASEDGTV
Sbjct: 23 QNVAQLLRRRREGKIPASTGGGVLGGSTSARATSAALRGIRGVGGRVGAGG----VSMPRAFGFRRNLGQHPSMIQRLRHTATLRGHSGCVNRLCWNDAGTRIASGSDDTTVCLFDAASGKRDVQFQTGHRRNILSVKFLPCTNDQILVTGAMDGEVRLHKAPFSSPEL-TECFSCHDQRVHAVEVEPGNPFIFWSASEDGTV 220
BLAST of mRNA_H-elongata_contig57209.13178.1 vs. uniprot
Match: A0A485LQN6_9STRA (Aste57867_24505 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LQN6_9STRA) HSP 1 Score: 127 bits (319), Expect = 1.800e-30 Identity = 64/141 (45.39%), Postives = 88/141 (62.41%), Query Frame = 1
Query: 187 GFRRSVGEHPSIIKRLRHTATLRGHDQCVNRLCWNETGTTIASVSDDTTVCLFDASTATRKMQFQTGHTRNILGVRILPCTNGQLIVTGAMDKEVRLHMAPFSPEELQVEVFKCHESRINAIEVEPGNPFLFWSASEDGTV 609
G +R + H +++KRL + L HD CVNRLCWN++GTT+AS SDDT V L+D +T T + +TGH+ NI GV +P TN ++ +G MD EVRLH PF PE ++ H R+ + PG P + WS +EDG V
Sbjct: 24 GPQRQLQAHAALVKRLVCDSVLNKHDGCVNRLCWNQSGTTLASGSDDTRVILWDYNTRTARHVIETGHSMNIFGVCFVPGTNDHIVASGGMDCEVRLHFGPFRPEGSKL--VATHRGRVKDVVSSPGVPKVIWSGAEDGLV 162
BLAST of mRNA_H-elongata_contig57209.13178.1 vs. uniprot
Match: A0A7S1HGD3_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1HGD3_HEMAN) HSP 1 Score: 119 bits (299), Expect = 7.530e-30 Identity = 61/141 (43.26%), Postives = 87/141 (61.70%), Query Frame = 1
Query: 196 RSVGEHPSIIKRLRHTATLRGHDQCVNRLCWNETGTTIASVSDDTTVCLFDASTATRKM---QFQTGHTRNILGVRILPCTNGQLIVTGAMDKEVRLHMAPFSPEELQVEVFKCHESRINAIEVEPGNPFLFWSASEDGTV 609
+++ H ++ RL L+ H+ CVNR+ WN TGT +ASVSDD C++ + + F+TGH+RNI GVR LP T + +VTGAMD EVR H + + + V+ CH +R+ +E+E GNP LFWSA EDG +
Sbjct: 40 QALQSHHALAVRLSLEKQLKEHEGCVNRISWNSTGTLLASVSDDCCCCVWSYGSYAQSQLSHSFETGHSRNIFGVRFLPETQDRQMVTGAMDCEVRHHTITDAGD-VHTRVYNCHANRVKDVEIEHGNPHLFWSAGEDGKI 179
BLAST of mRNA_H-elongata_contig57209.13178.1 vs. uniprot
Match: A0A8K1FIH9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FIH9_PYTOL) HSP 1 Score: 121 bits (304), Expect = 2.070e-28 Identity = 62/133 (46.62%), Postives = 83/133 (62.41%), Query Frame = 1
Query: 211 HPSIIKRLRHTATLRGHDQCVNRLCWNETGTTIASVSDDTTVCLFDASTATRKMQFQTGHTRNILGVRILPCTNGQLIVTGAMDKEVRLHMAPFSPEELQVEVFKCHESRINAIEVEPGNPFLFWSASEDGTV 609
H S+++RL A L GH CVN L WN G+ +AS SDDT + L+D +T ++ +TGH NI V +P TN ++ TGAMDK+VR+H APF PE + F+ H+ R+ I PG P LFWS +EDG V
Sbjct: 46 HGSLLRRLVPEAVLTGHTGCVNHLRWNRNGSLLASGSDDTNLILWDYATKQQRHVIETGHLLNIFAVCFVPETNDHILATGAMDKDVRIHYAPFRPE--ATKRFRLHKGRVKDIASSPGAPKLFWSVAEDGLV 176
BLAST of mRNA_H-elongata_contig57209.13178.1 vs. uniprot
Match: M2XUM7_GALSU (WD and tetratricopeptide repeats protein 1 isoform 1 n=2 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XUM7_GALSU) HSP 1 Score: 120 bits (301), Expect = 5.060e-28 Identity = 63/133 (47.37%), Postives = 86/133 (64.66%), Query Frame = 1
Query: 211 HPSIIKRLRHTATLRGHDQCVNRLCWNETGTTIASVSDDTTVCLFDASTATRKMQFQTGHTRNILGVRILPCTNGQLIVTGAMDKEVRLHMAPFSPEELQVEVFKCHESRINAIEVEPGNPFLFWSASEDGTV 609
H S ++L + ATL+GH CVNRL +NE G+ + S SDD + ++D + T + Q +TGH RNI GVR +PCTN +L+ +GAMD VR+ PE+L F+ HE R+ I+VE NP L +SASEDG V
Sbjct: 35 HSSFFQKLENIATLKGHSGCVNRLSFNEEGSLLLSGSDDCRLLVWDVAEGTLRDQVETGHDRNIFGVRFIPCTNDRLLASGAMDCTVRVSSLDGRPEKL----FEVHEDRVKTIDVERRNPNLIFSASEDGRV 163
BLAST of mRNA_H-elongata_contig57209.13178.1 vs. uniprot
Match: A0A7S0E4J1_9CRYP (Hypothetical protein n=2 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0E4J1_9CRYP) HSP 1 Score: 119 bits (299), Expect = 1.000e-27 Identity = 69/151 (45.70%), Postives = 91/151 (60.26%), Query Frame = 1
Query: 160 GLLRGSSSFGFRRSVGEHPSIIKRLRHTATLRGHDQCVNRLCWNETGTTIASVSDDTTVCLFDASTATRKMQFQTGHTRNILGVRILPCTNGQLIVTGAMDKEVRLHMAPFSPEE-LQVEVFKCHESRINAIEVEPGNPFLFWSASEDGTV 609
G +RG FR S+ H ++I +L LRGH CVNRLCWN+TGT +ASVSDD L+D + T ++ TGH RNI GV +P +N IVTGAMD +VRLH SP+ E++ H R+ ++ P LFWSA+EDGT+
Sbjct: 15 GYMRGRR---FRGSLLGHRALIDKLTLDQELRGHTGCVNRLCWNDTGTKLASVSDDCKCILWDVNRHTH-VEISTGHERNIFGVAFIPESNDSWIVTGAMDYQVRLHKV--SPDGGYNCELYSHHRDRVKDVKTTSQEPNLFWSAAEDGTL 159
BLAST of mRNA_H-elongata_contig57209.13178.1 vs. uniprot
Match: L1JDY1_GUITC (Uncharacterized protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1JDY1_GUITC) HSP 1 Score: 117 bits (293), Expect = 6.340e-27 Identity = 65/141 (46.10%), Postives = 87/141 (61.70%), Query Frame = 1
Query: 190 FRRSVGEHPSIIKRLRHTATLRGHDQCVNRLCWNETGTTIASVSDDTTVCLFDASTATRKMQFQTGHTRNILGVRILPCTNGQLIVTGAMDKEVRLHMAPFSPE-ELQVEVFKCHESRINAIEVEPGNPFLFWSASEDGTV 609
FR S+ H S++ +L LRGH CVNRLCWNETGT +ASVSDD ++D + + ++ T H RNI GV +P N IVTGAMD +VRLH SP+ + + E+F H R+ ++ P LFWSA+EDGT+
Sbjct: 6 FRNSLLGHKSLVDKLTLHKELRGHAGCVNRLCWNETGTKLASVSDDCKCIIWDVNRNSH-LEISTEHERNIFGVAFIPERNDSWIVTGAMDFQVRLHK--ISPDGDCKGELFSYHTDRVKDVKTISQEPNLFWSAAEDGTI 143
BLAST of mRNA_H-elongata_contig57209.13178.1 vs. uniprot
Match: A0A2D4CB75_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CB75_PYTIN) HSP 1 Score: 115 bits (288), Expect = 3.000e-26 Identity = 60/140 (42.86%), Postives = 81/140 (57.86%), Query Frame = 1
Query: 190 FRRSVGEHPSIIKRLRHTATLRGHDQCVNRLCWNETGTTIASVSDDTTVCLFDASTATRKMQFQTGHTRNILGVRILPCTNGQLIVTGAMDKEVRLHMAPFSPEELQVEVFKCHESRINAIEVEPGNPFLFWSASEDGTV 609
F ++ H ++++RL ATL H CVN L WNE GT +AS SDDT + L+D +T + TGH NI V +P T ++ TGAMDK+VR+H APF + + F+ H R+ I PG P +FWS EDG V
Sbjct: 51 FNATLQSHGALLRRLAVDATLESHRGCVNHLRWNEQGTLLASGSDDTRLILWDYATHRVRADIATGHVLNIFAVCFVPGTQDHILATGAMDKDVRIHYAPFRRD--STKRFRFHRGRVKDIASSPGVPRVFWSVGEDGVV 188
BLAST of mRNA_H-elongata_contig57209.13178.1 vs. uniprot
Match: A0A1V9Z7T1_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z7T1_9STRA) HSP 1 Score: 114 bits (284), Expect = 1.080e-25 Identity = 61/149 (40.94%), Postives = 83/149 (55.70%), Query Frame = 1
Query: 163 LLRGSSSFGFRRSVGEHPSIIKRLRHTATLRGHDQCVNRLCWNETGTTIASVSDDTTVCLFDASTATRKMQFQTGHTRNILGVRILPCTNGQLIVTGAMDKEVRLHMAPFSPEELQVEVFKCHESRINAIEVEPGNPFLFWSASEDGTV 609
+LR +R + H ++++RL A L+ HD CVNRLCWN+ GT +AS SDDT V L+D + TGH+ NI GV +P TN ++ + MD EVRLH APF + + H R+ + P P +FWSA EDG V
Sbjct: 242 VLRSVEPLDPQRLIQGHGALVRRLVCDAVLQTHDGCVNRLCWNQQGTILASGSDDTRVVLWDYQRRKPRHVITTGHSMNIFGVAFVPGTNDHIVASAGMDCEVRLHYAPFRLDGSKF--LASHRGRVKDLATSPMVPHVFWSAGEDGVV 388
BLAST of mRNA_H-elongata_contig57209.13178.1 vs. uniprot
Match: A0A7S3FNU4_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chloropicon roscoffensis TaxID=1461544 RepID=A0A7S3FNU4_9CHLO) HSP 1 Score: 109 bits (272), Expect = 1.700e-25 Identity = 68/157 (43.31%), Postives = 85/157 (54.14%), Query Frame = 1
Query: 163 LLRGSSSFGFR-----RSVGEHPSIIKRLRHTATLRGHDQCVNRLCWNETGTTIASVSDDTTVCLFDASTATRK-MQFQTGHTRNILGVRILPCTNGQLIVTGAMDKEVRLHMAPFSPEELQVEV--FKCHESRINAIEVEPGNPFLFWSASEDGTV 609
+ RG S G R RS+ E ++++ L+GH CVNRLCWNE GT +AS SDDT V L+ R + T H NI GV+ LP + +VTGAMD EV+LH E V H +R+ A+EVE GNP FWS SEDG V
Sbjct: 15 VTRGRESLGLRQPTSTRSLAE--CLLRKTDSPTVLKGHRGCVNRLCWNEQGTLLASGSDDTRVILWSYPEWRRPAIVVPTNHKANIFGVKFLPLSGDAKLVTGAMDCEVQLHHLERVSREHNVHTTTLDFHHNRVKAVEVEQGNPHNFWSGSEDGNV 169 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig57209.13178.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig57209.13178.1 >prot_H-elongata_contig57209.13178.1 ID=prot_H-elongata_contig57209.13178.1|Name=mRNA_H-elongata_contig57209.13178.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=203bp QNIAQLLQQRRVGAIPASSGGRVSGGHTNARSTSAGMRGWDFLDPCSGSGback to top mRNA from alignment at H-elongata_contig57209:1180..3593+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig57209.13178.1 ID=mRNA_H-elongata_contig57209.13178.1|Name=mRNA_H-elongata_contig57209.13178.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2414bp|location=Sequence derived from alignment at H-elongata_contig57209:1180..3593+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig57209:1180..3593+ >mRNA_H-elongata_contig57209.13178.1 ID=mRNA_H-elongata_contig57209.13178.1|Name=mRNA_H-elongata_contig57209.13178.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1218bp|location=Sequence derived from alignment at H-elongata_contig57209:1180..3593+ (Himanthalia elongata Himel1 dioecious)back to top |