mRNA_H-elongata_contig57076.13162.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig57076.13162.1 vs. uniprot
Match: A0A836CLH3_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLH3_9STRA) HSP 1 Score: 103 bits (256), Expect = 1.610e-23 Identity = 50/66 (75.76%), Postives = 58/66 (87.88%), Query Frame = 1
Query: 1 QAIWILSELCSRGSLRQVLNENTP-LPSKMRLRLGVDVAEGMLYLQSREEPIIHRDLKSHNVFLHE 195
QAIWI+SELCSRGSLRQVL++ + LP MRLR+ VD+AEGMLYL SRE+PIIHRDLKSHNVF+ E
Sbjct: 96 QAIWIVSELCSRGSLRQVLDDRSQHLPLVMRLRIAVDIAEGMLYLHSREQPIIHRDLKSHNVFIQE 161
BLAST of mRNA_H-elongata_contig57076.13162.1 vs. uniprot
Match: A0A6H5J8D6_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8D6_9PHAE) HSP 1 Score: 101 bits (251), Expect = 2.340e-22 Identity = 49/67 (73.13%), Postives = 57/67 (85.07%), Query Frame = 1
Query: 1 QAIWILSELCSRGSLRQVLNEN-TPLPSKMRLRLGVDVAEGMLYLQSREEPIIHRDLKSHNVFLHED 198
QAIWI+SELC RGSLRQVL++ T L + RLR+ VDVAEGMLYL SREEP+IHRDLKSHN+F+ ED
Sbjct: 1146 QAIWIVSELCPRGSLRQVLDDRGTSLTPRARLRVAVDVAEGMLYLHSREEPVIHRDLKSHNIFMMED 1212
BLAST of mRNA_H-elongata_contig57076.13162.1 vs. uniprot
Match: D7FTR3_ECTSI (Similar to Serine/threonine-protein kinase CTR1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTR3_ECTSI) HSP 1 Score: 100 bits (249), Expect = 4.210e-22 Identity = 49/66 (74.24%), Postives = 56/66 (84.85%), Query Frame = 1
Query: 4 AIWILSELCSRGSLRQVLNEN-TPLPSKMRLRLGVDVAEGMLYLQSREEPIIHRDLKSHNVFLHED 198
AIWI+SELC RGSLRQVL++ TPL RLR+ VDVAEGMLYL SREEP+IHRDLKSHN+F+ ED
Sbjct: 521 AIWIVSELCPRGSLRQVLDDRGTPLTPWARLRVAVDVAEGMLYLHSREEPVIHRDLKSHNIFMMED 586
BLAST of mRNA_H-elongata_contig57076.13162.1 vs. uniprot
Match: A0A7S3XPL6_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XPL6_HETAK) HSP 1 Score: 99.0 bits (245), Expect = 5.420e-22 Identity = 45/66 (68.18%), Postives = 57/66 (86.36%), Query Frame = 1
Query: 1 QAIWILSELCSRGSLRQVLNEN-TPLPSKMRLRLGVDVAEGMLYLQSREEPIIHRDLKSHNVFLHE 195
Q++WI+SELCSRGSLRQVLN+ T L ++ RL+L +DVAEGMLYL + E PI+HRDLKSHN+F+HE
Sbjct: 195 QSLWIVSELCSRGSLRQVLNDRRTRLSTRRRLQLAIDVAEGMLYLHNHEAPIVHRDLKSHNIFIHE 260
BLAST of mRNA_H-elongata_contig57076.13162.1 vs. uniprot
Match: A0A835Z8B5_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8B5_9STRA) HSP 1 Score: 94.7 bits (234), Expect = 5.600e-21 Identity = 46/65 (70.77%), Postives = 55/65 (84.62%), Query Frame = 1
Query: 4 AIWILSELCSRGSLRQVLNENTP-LPSKMRLRLGVDVAEGMLYLQSREEPIIHRDLKSHNVFLHE 195
AIWI+SELCSRGSLRQVL++ + L RLR+ VDVAEGMLYL +R++PIIHRDLKSHNVF+ E
Sbjct: 97 AIWIVSELCSRGSLRQVLDDRSQQLTPVQRLRIAVDVAEGMLYLHTRDQPIIHRDLKSHNVFIQE 161
BLAST of mRNA_H-elongata_contig57076.13162.1 vs. uniprot
Match: A0A6U2RLA0_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A6U2RLA0_9STRA) HSP 1 Score: 95.1 bits (235), Expect = 3.250e-20 Identity = 46/66 (69.70%), Postives = 55/66 (83.33%), Query Frame = 1
Query: 1 QAIWILSELCSRGSLRQVL-NENTPLPSKMRLRLGVDVAEGMLYLQSREEPIIHRDLKSHNVFLHE 195
QAIWI+SELCS GSLRQVL +EN LP +RL+L + VAEGM YL ++E PIIHRDLKSHN+F+HE
Sbjct: 671 QAIWIVSELCSLGSLRQVLMDENRDLPIALRLQLALHVAEGMAYLHTQEPPIIHRDLKSHNIFIHE 736
BLAST of mRNA_H-elongata_contig57076.13162.1 vs. uniprot
Match: A0A1Z5JH37_FISSO (Protein kinase domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JH37_FISSO) HSP 1 Score: 95.1 bits (235), Expect = 3.390e-20 Identity = 49/80 (61.25%), Postives = 64/80 (80.00%), Query Frame = 1
Query: 1 QAIWILSELCSRGSLRQVLNENTPLPS-KMRLRLGVDVAEGMLYLQSREEPIIHRDLKSHNVFLHE---DVE*GTHTHSR 228
QAIWI+SELCS+GSLRQ+L++N + S +RL+L + VAEGM YL ++E PIIHRDLKSHN+F+HE DVE G+ T S+
Sbjct: 627 QAIWIVSELCSQGSLRQLLDDNERVLSVDLRLQLALQVAEGMTYLHNQEPPIIHRDLKSHNIFVHETFTDVEDGSTTSSK 706
BLAST of mRNA_H-elongata_contig57076.13162.1 vs. uniprot
Match: A0A7S1D2K4_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D2K4_CYCTE) HSP 1 Score: 93.2 bits (230), Expect = 4.330e-20 Identity = 40/65 (61.54%), Postives = 55/65 (84.62%), Query Frame = 1
Query: 1 QAIWILSELCSRGSLRQVLNENTPLPSKMRLRLGVDVAEGMLYLQSREEPIIHRDLKSHNVFLHE 195
QAIWI+SELCS GSLRQ+L+ + +P +R+R+ + VAEGM+YL +++ PIIHRDLKSHN+F+HE
Sbjct: 99 QAIWIVSELCSLGSLRQLLDGDRGMPQGLRIRMALQVAEGMMYLHNQDTPIIHRDLKSHNIFVHE 163
BLAST of mRNA_H-elongata_contig57076.13162.1 vs. uniprot
Match: A0A1Z5K8N3_FISSO (Protein kinase domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K8N3_FISSO) HSP 1 Score: 93.6 bits (231), Expect = 1.130e-19 Identity = 48/80 (60.00%), Postives = 63/80 (78.75%), Query Frame = 1
Query: 1 QAIWILSELCSRGSLRQVLNENTPLPS-KMRLRLGVDVAEGMLYLQSREEPIIHRDLKSHNVFLHE---DVE*GTHTHSR 228
QAIWI+SELCS+GSLRQ+L++N + S +RL+L + VAEGM YL ++E PIIHRDLKSHN+F+HE D E G+ T S+
Sbjct: 846 QAIWIVSELCSQGSLRQLLDDNERVLSVDLRLQLALQVAEGMTYLHNQEPPIIHRDLKSHNIFVHETFTDAEDGSTTSSK 925
BLAST of mRNA_H-elongata_contig57076.13162.1 vs. uniprot
Match: A0A7S2RJM8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RJM8_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 1.170e-19 Identity = 41/66 (62.12%), Postives = 54/66 (81.82%), Query Frame = 1
Query: 1 QAIWILSELCSRGSLRQVLNE-NTPLPSKMRLRLGVDVAEGMLYLQSREEPIIHRDLKSHNVFLHE 195
QAIWI+SEL S GSLRQVL+E +T L ++++ + + VAEGM+YL +E PIIHRDLKSHN+F+HE
Sbjct: 32 QAIWIISELMSLGSLRQVLDETDTELSIELKVNIALQVAEGMMYLHGQEPPIIHRDLKSHNIFIHE 97 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig57076.13162.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig57076.13162.1 >prot_H-elongata_contig57076.13162.1 ID=prot_H-elongata_contig57076.13162.1|Name=mRNA_H-elongata_contig57076.13162.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=41bp MRLRLGVDVAEGMLYLQSREEPIIHRDLKSHNVFLHEDVE*back to top mRNA from alignment at H-elongata_contig57076:710..1430- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig57076.13162.1 ID=mRNA_H-elongata_contig57076.13162.1|Name=mRNA_H-elongata_contig57076.13162.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=721bp|location=Sequence derived from alignment at H-elongata_contig57076:710..1430- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig57076:710..1430- >mRNA_H-elongata_contig57076.13162.1 ID=mRNA_H-elongata_contig57076.13162.1|Name=mRNA_H-elongata_contig57076.13162.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=246bp|location=Sequence derived from alignment at H-elongata_contig57076:710..1430- (Himanthalia elongata Himel1 dioecious)back to top |