mRNA_H-elongata_contig5701.13154.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig5701.13154.1 vs. uniprot
Match: A0A1V9Z3Y0_9STRA (PIH1_CS domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z3Y0_9STRA) HSP 1 Score: 142 bits (357), Expect = 1.460e-39 Identity = 82/187 (43.85%), Postives = 113/187 (60.43%), Query Frame = 1
Query: 1 MAGAADLLALGDLLREGEEEEEGRYHADNALEKRFTPGDFGAPA------ITETSPQSRKTSDPKAIWDEDEAVQDEDPFHDPEDKRPQPWYDFVYKQSVMAEDAFLGMSGKTPGSQDCTHIVVKVIFPGCLMRDIEVDVTKQNFLAASPKLRLSTYLPLPVDETKGVAEWDATNETLSVTLPIITD 543
M+ +DLLAL DLLR EE + + A TPG +PA I + P +K DPKAIWDEDE D + D +D++ +P ++ +YKQ VM ED FLG+ K P + C +VVK++FPG +R+I++DV Q +A S +L+LSTYLP PV +G A+WD +TL VTLPI+ D
Sbjct: 1 MSAFSDLLALSDLLR-SEETHDDEHQRKQAF---VTPGSIASPALPKGGIIDQGFPLIKK--DPKAIWDEDEVGSDAEDEEDSDDRK-RPKHEILYKQDVMTEDVFLGLGDKDPSTAHCDAMVVKIVFPGHKLREIDLDVKAQKLVAQSSRLKLSTYLPYPVKHKEGKAKWDPKTDTLIVTLPIVRD 180
BLAST of mRNA_H-elongata_contig5701.13154.1 vs. uniprot
Match: A0A7S2BY64_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BY64_9STRA) HSP 1 Score: 143 bits (361), Expect = 2.080e-39 Identity = 68/128 (53.12%), Postives = 88/128 (68.75%), Query Frame = 1
Query: 169 DPKAIWDEDEAVQDEDPF-HDPEDKRPQPWYDFVYKQSVMAEDAFLGMSGKTPGSQDCTHIVVKVIFPGCLMRDIEVDVTKQNFLAASPKLRLSTYLPLPVDETKGVAEWDATNETLSVTLPIITDVW 549
DPK IWDEDE +E D ED RP+P Y+ ++KQ VM+ED FLGM KTPGS DCTH+ +++ FPG M+D+++DVT Q A SP++ L+ YLPLPVD +G A+WD E L +TLPI D W
Sbjct: 118 DPKDIWDEDEVPTEEAILVEDMEDARPRPKYEILFKQDVMSEDVFLGMGEKTPGSSDCTHMTIRIQFPGHTMKDLDLDVTTQKLRAESPRMLLAIYLPLPVDSDRGSAKWDTKKEMLIITLPIKRDEW 245
BLAST of mRNA_H-elongata_contig5701.13154.1 vs. uniprot
Match: A0A7S2S1L9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S1L9_9STRA) HSP 1 Score: 133 bits (334), Expect = 1.020e-35 Identity = 68/131 (51.91%), Postives = 84/131 (64.12%), Query Frame = 1
Query: 169 DPKAIWDEDEAVQDE----DPFHDPEDKRPQPWYDFVYKQSVMAEDAFLGMSGKTPGSQDCTHIVVKVIFPGCLMRDIEVDVTKQNFLAASPKLRLSTYLPLPVDETKGVAEWDATNETLSVTLPIITDVW 549
DPK IWDEDE +E + HD R +P Y+ ++KQ+V +D FLG KTPGS DCTHIV+K +FP MRD+ +DVTK A S + LS YLPLPVD G A+WDA E+L VTLPI+ D W
Sbjct: 87 DPKDIWDEDEVPPEEAILSEEIHD---GRQRPRYEVLFKQAVGTQDVFLGTGDKTPGSVDCTHIVIKAVFPSHSMRDLHLDVTKNKIRAESKSMLLSMYLPLPVDPDHGSAKWDAKKESLIVTLPIVRDEW 214
BLAST of mRNA_H-elongata_contig5701.13154.1 vs. uniprot
Match: K3WAM9_GLOUD (PIH1_CS domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WAM9_GLOUD) HSP 1 Score: 128 bits (321), Expect = 4.120e-34 Identity = 81/189 (42.86%), Postives = 107/189 (56.61%), Query Frame = 1
Query: 1 MAGAADLLALGDLLREGEEE--EEGRYHADNALEKRFTPGDFGA----PAITETSPQSRKTSDPKAIWDEDEAVQDEDPFHDPEDKRPQPWYDFVYKQSVMAEDAFLGMSGKTPGSQDCTHIVVKVIFPGCLMRDIEVDVTKQNFLAASPKLRLSTYLPLPVDETKGVAEWDATNETLSVTLPIITDVW 549
M GA D+LAL +L+ G++E +E Y + K TP G P +T Q R +DP+AIW DE D D D + RP+P +D +YKQ+VM ED FLG+S K P S C +VV+V P DIE+DV +Q L S L+LS YLP PV G A+WD +TL+++LPII D W
Sbjct: 1 MDGATDILALSELIS-GQQEMYDEDAYEEQRQVAK-LTPSTVGGAANVPKVTRPIGQIRP-ADPRAIWSLDEVPSD-DEGDDAYETRPRPIFDILYKQNVMTEDMFLGLSDKDPSSAHCEAMVVRVKCPNHRQDDIELDVKRQKLLLQSSSLKLSLYLPHPVRHQDGHAKWDPKKQTLTISLPIIRDEW 185
BLAST of mRNA_H-elongata_contig5701.13154.1 vs. uniprot
Match: A0A7R9UHK7_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UHK7_9STRA) HSP 1 Score: 127 bits (319), Expect = 9.480e-34 Identity = 84/198 (42.42%), Postives = 105/198 (53.03%), Query Frame = 1
Query: 13 ADLLALGDLLREGEEEEEGRYHADNALEKRFTPGDFGAPAITETSPQSRKTSDPKAIWDEDEAVQDEDPFHDPEDKRPQPWYDFVYKQSVMAEDAFLGMSGKTPGSQDCTHIVVKVIFPGCL-MRDIEVDVT--------------------KQNFLAASPKLRLSTYLPLPVDETKGVAEWDATNETLSVTLPIITD 543
+D+LAL LL+ E G + + TP FG P ++ P++RK DPKAIWD E V D P D RP P + YKQ V A D FLG S KTPGSQDCTH+V KV FP +++E+DV KQ +A S LRL T+LP+PVD G A+WDA + L VTLPI+ D
Sbjct: 2 SDILALSSLLQPSEGSSAG-----TSTQPVVTPATFGPP---KSKPKARK--DPKAIWDPAE-VPYADEIEAPRDDRPVPQFYMFYKQDVDAGDVFLGTSDKTPGSQDCTHLVYKVFFPDAKGAQELELDVKVRIVRKLCQLSLGLIVGMLQKQRLVAESSSLRLDTFLPMPVDSENGKAQWDAAKKCLCVTLPILLD 188
BLAST of mRNA_H-elongata_contig5701.13154.1 vs. uniprot
Match: A0A482SSY8_9ARCH (PIH1_CS domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SSY8_9ARCH) HSP 1 Score: 126 bits (316), Expect = 2.750e-33 Identity = 81/190 (42.63%), Postives = 106/190 (55.79%), Query Frame = 1
Query: 1 MAGAADLLALGDLLREGEEEEEGRYHADNALE---------KRFTPGDFGA--PAITETSPQSRKTSDPKAIWDEDEAVQDEDPFHDPEDKRPQPWYDFVYKQSVMAEDAFLGMSGKTPGSQDCTHIVVKVIFPGCLMRDIEVDVTKQNFLAASPKLRLSTYLPLPVDETKGVAEWDATNETLSVTLPII 537
M G D+ L LL E +E E R A + KR PGD A P+I E +K + IW EDE + ED + D RP P ++ YKQS+ ED FLG+S KTP + DCTHIV+K+ FPG MR++++DV+ +AAS RL TYLP VD+ G A +D+ E L+VTLPII
Sbjct: 1 MEGLMDIGNLSKLLAESKEANEFRSGEQFAQKPTATVPTVIKRSQPGDVAAATPSINE----KKKNAHSDDIWAEDE-IPTEDALLNVRDDRPTPRFEISYKQSIGTEDTFLGLSDKTPLTTDCTHIVIKIHFPGSSMRELDLDVSSNRIMAASRTHRLFTYLPADVDDANGKAAFDSKKEVLTVTLPII 185
BLAST of mRNA_H-elongata_contig5701.13154.1 vs. uniprot
Match: A0A8K1FGL0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FGL0_PYTOL) HSP 1 Score: 125 bits (315), Expect = 3.300e-33 Identity = 79/184 (42.93%), Postives = 100/184 (54.35%), Query Frame = 1
Query: 7 GAADLLALGDLLREGEEEEEGRYHADNALEKRFTPGDF---GAPAITETSPQSRKTSDPKAIWDEDEAVQDEDPFHDPEDKRPQPWYDFVYKQSVMAEDAFLGMSGKTPGSQDCTHIVVKVIFPGCLMRDIEVDVTKQNFLAASPKLRLSTYLPLPVDETKGVAEWDATNETLSVTLPIITDVW 549
G A++LAL DLL + ++ + H D TP AP + Q K D KAIW +E D D D D R +P ++ +YKQSVM ED FLG+S K P S C +VV+V P + DIE+DV KQ L S L+LS YLP PV G A+WDA +TLS+ LPII D W
Sbjct: 4 GMAEILALSDLLANCNDSDDYQEHDDVRQTPMITPASMTGHSAPVVDRPIGQI-KPVDSKAIWLPEEVPSD-DEDDDTFDTRRRPTFEILYKQSVMTEDVFLGLSDKDPSSAHCEAMVVRVDCPKHRLEDIELDVKKQKLLLHSSTLKLSLYLPYPVRYQDGQAQWDAVKQTLSIRLPIIRDEW 185
BLAST of mRNA_H-elongata_contig5701.13154.1 vs. uniprot
Match: A0A024TEU7_9STRA (PIH1_CS domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TEU7_9STRA) HSP 1 Score: 125 bits (313), Expect = 5.570e-33 Identity = 79/191 (41.36%), Postives = 104/191 (54.45%), Query Frame = 1
Query: 1 MAGAADLLALGDLLREGEEEE--EGRY------HADNALEKRFTPGDFGAPAITETSPQSRKTSDPKAIWDEDEAVQDEDPFHDPEDKRPQPWYDFVYKQSVMAEDAFLGMSGKTPGSQDCTHIVVKVIFPGCLMRDIEVDVTKQNFLAASPKLRLSTYLPLPVDETKGVAEWDATNETLSVTLPIITDVW 549
M+ DLLAL DLL+ EE++ EG HA AL K G T+DPKAIW +DE D D D D R +P ++ ++KQ VM ED FLG+ K P C + +K+ FPG + +I +D+TK +A S L+LS YLP PV +G A WDAT +TL+VT+PII D W
Sbjct: 1 MSSFHDLLALSDLLQPAEEDDRHEGAVSNGPVPHAHVALPKEAMNRQIGQIV----------TADPKAIWTDDEVGSDGD--DDEFDTRRRPKHEVLFKQEVMTEDVFLGLGDKDPSVASCDAMTIKISFPGHRLDEIALDLTKHKLIAQSHALKLSLYLPNPVRHKQGKATWDATTDTLAVTVPIIKDEW 179
BLAST of mRNA_H-elongata_contig5701.13154.1 vs. uniprot
Match: A0A329S0T5_9STRA (PIH1_CS domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A329S0T5_9STRA) HSP 1 Score: 119 bits (298), Expect = 1.150e-30 Identity = 76/182 (41.76%), Postives = 104/182 (57.14%), Query Frame = 1
Query: 16 DLLALGDLLREGEEEEEGRYHADNALEKRFTP----GDFGAPAITETSPQSRKTSDPKAIWDEDEAVQDEDPFHDPEDKRPQPWYDFVYKQSVMAEDAFLGMSGKTPGSQDCTHIVVKVIFPGCLMRDIEVDVTKQNFLAASPKLRLSTYLPLPVDETKGVAEWDATNETLSVTLPIITDVW 549
+LLAL DLL G ++ + Y N ++ TP G P +T Q R+ DPKAIW DE D D D + R +P ++ +YKQSVM ED FLG+S K P S C +VV+V P + D+E+DV +Q L S KL+L LP PV +G A+WD +++LS++LPII D W
Sbjct: 7 ELLALNDLLT-GIQDAQDDYEEQNQAQQ-VTPYTLNGAAKLPEVTRPIGQIRQ-EDPKAIWSIDEVPSD-DEDDDSFETRARPKFEILYKQSVMTEDVFLGLSDKDPSSAHCEAMVVRVECPDHRLEDLELDVKRQKLLLLSSKLKLVLSLPYPVRHLEGQAKWDHKSQSLSISLPIIRDEW 184
BLAST of mRNA_H-elongata_contig5701.13154.1 vs. uniprot
Match: A0A6A3YBP0_9STRA (PIH1_CS domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3YBP0_9STRA) HSP 1 Score: 116 bits (291), Expect = 1.400e-29 Identity = 73/183 (39.89%), Postives = 98/183 (53.55%), Query Frame = 1
Query: 16 DLLALGDLLREGEEEEEGRYHADNALEKRFTPGDFGAPAITETSPQSRKTS-----DPKAIWDEDEAVQDEDPFHDPEDKRPQPWYDFVYKQSVMAEDAFLGMSGKTPGSQDCTHIVVKVIFPGCLMRDIEVDVTKQNFLAASPKLRLSTYLPLPVDETKGVAEWDATNETLSVTLPIITDVW 549
+LLAL DLL G ++ + Y + + TP A + +R DPKAIW DE D D D + R +P ++ +YKQSVM ED FLG+S K P S C +VV+V P + DIE+DV +Q L S L+L YLP PV +G A+WD +LSV+LPI+ D W
Sbjct: 7 ELLALNDLLT-GCQDAQDEYEENQNQLHQITPYTLNGAATAKYPEVTRPIGQILQDDPKAIWSMDEVPSD-DEDDDAFETRSRPQFEILYKQSVMTEDVFLGLSDKDPSSAHCEAMVVRVECPDHRLEDIELDVKRQKLLLLSSTLKLVLYLPHPVRHLEGQAKWDHKTHSLSVSLPIVRDEW 187 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5701.13154.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig5701.13154.1 >prot_H-elongata_contig5701.13154.1 ID=prot_H-elongata_contig5701.13154.1|Name=mRNA_H-elongata_contig5701.13154.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=184bp MAGAADLLALGDLLREGEEEEEGRYHADNALEKRFTPGDFGAPAITETSPback to top mRNA from alignment at H-elongata_contig5701:6252..9162+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig5701.13154.1 ID=mRNA_H-elongata_contig5701.13154.1|Name=mRNA_H-elongata_contig5701.13154.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2911bp|location=Sequence derived from alignment at H-elongata_contig5701:6252..9162+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig5701:6252..9162+ >mRNA_H-elongata_contig5701.13154.1 ID=mRNA_H-elongata_contig5701.13154.1|Name=mRNA_H-elongata_contig5701.13154.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1104bp|location=Sequence derived from alignment at H-elongata_contig5701:6252..9162+ (Himanthalia elongata Himel1 dioecious)back to top |