mRNA_H-elongata_contig5669.13117.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig5669.13117.1
Unique NamemRNA_H-elongata_contig5669.13117.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig5669.13117.1 vs. uniprot
Match: UPI000C7162A7 (breast cancer type 2 susceptibility protein homolog n=1 Tax=Orussus abietinus TaxID=222816 RepID=UPI000C7162A7)

HSP 1 Score: 94.7 bits (234), Expect = 2.610e-17
Identity = 103/366 (28.14%), Postives = 165/366 (45.08%), Query Frame = 1
Query:   10 EAGLATGFRTGRGKSLCVSAEALEKTRQYFPEEVAL-------TPRVVSGVPSATTRGTSRRPPSGMMFSTGKGRPIEVSAEALARAQSLFKDG-DARASPEMKHPPPPALTGGVIDSGESDGVF-----STASGKSIEVSAEGLTQAKRMFQDP----GCAAVTAPGSGNGDTTS------RNHLPSSMMFSTGRGRPIEVSVEALTRAKRLFEDLNPPALPKPKLLPLSNVAGDITDGGKKSLE--------GKEGRI----FSTANGTSIKVSDEAFTWAKKMFEEPGSTEATDSRNVGEGGDRRKRESAGSKTSVQNNTRDMF-----FTGTGKKVVVSAGAIARAEEMF--RNVESLTEVS 981
            E GL  GF T  GK + +S +AL K  + F +++         +P   S   ++          S   F T  G+P+ +S EAL +A++L  D  D         P     T         + +F     STASGK + +S E L++AK +F DP      A+  +P       TS      +++ PS + FST  G+P+ +S EAL++AK LF D            PL +      D   K  +         K+G      FSTA+G  + +S EA + AK +F +P      D   +    D   ++SA S +S ++N +D+F     +T +GK V VS  A+ +A+ +F  ++ ES  +++
Sbjct:  921 ETGLRFGFTTASGKPVNISKDALAKAEKLFVDQINDFDIANNDSPLRKSNPSTSYKDSNKENVLSSSEFFTASGKPVNISKEALLKAKTLIADPLDDFEIVNNDSPSKKTDTSTSFKESNKNDIFPYSGFSTASGKPVNISKEALSKAKTLFADPLDDFEIASNDSPSKKTDTFTSFKESNKKDNFPS-VGFSTASGKPVNISKEALSKAKTLFAD------------PLDDFQIANNDSPSKKTDTSTSFKESNKKGNFPSVGFSTASGKPVNISKEALSKAKTLFADP-----LDDFEIANN-DSPSKKSAASTSSKESN-KDIFPSSGFYTASGKSVGVSKEALLKAKALFSEQSEESAVQIN 1266          
BLAST of mRNA_H-elongata_contig5669.13117.1 vs. uniprot
Match: UPI000771BB05 (breast cancer type 2 susceptibility protein homolog n=1 Tax=Cephus cinctus TaxID=211228 RepID=UPI000771BB05)

HSP 1 Score: 90.5 bits (223), Expect = 6.620e-16
Identity = 107/390 (27.44%), Postives = 184/390 (47.18%), Query Frame = 1
Query:   19 LATGFRTGRGKSLCVSAEALEKTRQYFPE-EVALTPRVVSG-VPSATTRGTSRRPPSGMMFSTGKGRPIEVSAEALARAQSLFKDGDARASPEMKHPPPPALTGGVIDSGESDGV-FSTASGKSIEVSAEGLTQAKRMFQDPGCAAVTAPG-----SGNGDTTSRNHLPSSMMFSTGRGRPIEVSVEALTRAKRLFEDLNPPALPKPKLLPLSNVAGDITDGGKKSLEGKEGRIFSTANGTSIKVSDEAFTWAKKMFEEPGSTEATD--SRNVGEGGDRRKRESAGSKTSVQNNTRDMFFTGTGKKVVVSAGAIARAEEMFRNVES-LTEVSFDGGCVGGGECGGGGDSV-----------------FSTGNGRAVKVSPAAICKARNMF 1104
            +A GF T  G+++ VS EAL K +  F   E  +T  +    +       T  + P  + FST  GRP++VS +AL++++++F++ ++  + ++       +     D  +   + FSTA G+ ++VS + L+++K +F++   + VT        S   D  +    P ++ FST  GRP++VS +AL+++K +FE+L            LS +    TD  K    G     FSTA G  +KVS++A + +K +FE   ST   D    ++ E  D         +T  +      F T  G+ V VS  A+++++ +F N+ES +T+  F              D +                 FST  GR VKVS  A+ K++ +F
Sbjct:  986 MAFGFSTAGGRAVNVSEEALSKAKALFENVESTITKDLFQEHLSEMKDYETDVKKPMTLGFSTAGGRPVKVSEQALSKSKAIFENLESTVTKDLFQEHLSEMKDYETDVKKPMTLGFSTAGGRPVKVSEQALSKSKAIFENLE-STVTKDLFQEHLSEMKDYETDVKKPMTLGFSTAGGRPVKVSEQALSKSKAIFENLESTVTKDLFQDHLSEMKDYETDAKKLMTLG-----FSTAGGRPVKVSEQALSKSKAIFENLESTVTKDLFQDHLSEMKDY--------ETDAKKLMTLGFSTAGGRPVKVSEQALSKSKAIFENLESTVTKDLFQ-------------DHLSEMKDYETDAKKLMTLGFSTAGGRPVKVSEQALSKSKAIF 1348          
BLAST of mRNA_H-elongata_contig5669.13117.1 vs. uniprot
Match: UPI0010FB46C2 (breast cancer type 2 susceptibility protein homolog n=1 Tax=Nylanderia fulva TaxID=613905 RepID=UPI0010FB46C2)

HSP 1 Score: 89.4 bits (220), Expect = 1.560e-15
Identity = 96/385 (24.94%), Postives = 174/385 (45.19%), Query Frame = 1
Query:   31 FRTGRGKSLCVSAEALEKTRQYFPEEVALTPRVVSGVPSATTRGTSRRPPSGM---MFSTGKGRPIEVSAEALARAQSLFKDGDARASPEMKHPPPPALTGGVIDSGESDGV----FSTASGKSIEVSAEGLTQAKRMFQDP---GCAAVTAPGSGNGDTTS-RNHLPSSMMFSTGRGRPIEVSVEALTRAKRLFEDLNPPALPKPKLLPLSNVAGDITDGGKKSLEGKEGRIFSTANGTSIKVSDEAFTWAKKMFEEPGSTEATDSRNVGEGGDRRKRESAGSKTSVQNN--TRDMFFTGTGKKVVVSAGAIARAEEMFRNV-------------ESLTEVSFDGGCVGGGECGGGGDSVFSTGNGRAVKVSPAAICKARNMFA 1107
            F T  GK + +S ++L K ++   +E      V    P  +    +    + M   +FST  G+ I +S ++LA+A+ L  D     +  +   P  + T   ++S ES+ +    FSTA GKSI +S + L +AK++  D       ++  P     D  S  ++  +S +FST  G+PI +S ++L +AK+L  D       K   + +       TD            +FSTA G  I +S+++   AKK+  +    +   S    E       +S     S+++N  T  +F T  GK + +S  ++A+A+++  +              +SLT+V+         E      ++FST  G+++ +S  ++ KA+ +FA
Sbjct:  686 FSTAGGKPINISEKSLAKAKKLLADEAEKKNDVSIKYPEKSFTDVNSMESNNMTSTLFSTAGGKSINISEKSLAKAKKLLADEAENKNDMLIKYPEKSFTD--VNSMESNNMTSTLFSTAGGKSINISEKSLAKAKKLLADEEKKNDISIKYPEKSFTDINSMESNNMTSTLFSTAGGKPINISEKSLAKAKKLLAD----EAEKKNDVSIKYPEKSFTDINSMESNNMTSTLFSTAGGKPINISEKSLAEAKKLLADEAEKKNDVSIKYPE-------KSFTDINSMESNNMTSTLFSTAGGKSINISEKSLAKAKKLLADEAENKNDMLIKYPEKSLTDVNSM-------ESNNMTSALFSTAGGKSINISEKSLAKAKILFA 1050          
BLAST of mRNA_H-elongata_contig5669.13117.1 vs. uniprot
Match: UPI00160189B3 (uncharacterized protein LOC118419819 isoform X1 n=2 Tax=Branchiostoma floridae TaxID=7739 RepID=UPI00160189B3)

HSP 1 Score: 87.8 bits (216), Expect = 5.370e-15
Identity = 101/391 (25.83%), Postives = 166/391 (42.46%), Query Frame = 1
Query:   28 GFRTGRGKSLCVSAEALEKTRQYFPEEVALTPRVVSGVPSATTRGTSRRPPSGMM--FSTGKGRPIEVSAEALARAQSLFKDGDARASPEMKHPPPPALTGGVIDSGESDGVFSTASGKSIEVSAEGLTQAKRMFQDP------GCAAVTAPGSGNGDTTSRNHLPSSMMFSTGRGRPIEVSVEALTRAKRLFEDLNPPALPKPKLLPLSNVAGDITDGGKKSLEGKEGRIFSTANGTSIKVSDEAFTWAKKMFEEPGSTEATDSRNVGEGGDRRKRESAGSKTSVQNNTRDMFFTG----TGKKVVVSAGAIARA-------------EEMFRN--VESL--TEVSFDGGCVGGGECGGGGDSVFSTGNGRAVKVSPAAICKARNMFASD 1113
            GF+T RG+ + VS +AL K R  F ++       + G+   T  G ++   +     F T +G+ I+VS +AL +A++LF D     +   +    P +      +  +   F TA G+ IEVS + L +A+ +F D       G   + +P   +   T+ +       F T RG+ I+VS +AL +A+ L  D       K + +    +     +  K +     G  F TA G  ++VSD+A   A+ +F E    E+T    +            G K     NT    F G     G+K+ VS  A+ +A             +E F++  V+S+  T  S  GG              F TG G+ +++S  A+ KAR   + D
Sbjct: 2594 GFQTARGQKIKVSDDALRKARALFSDDANEETTALEGI-QGTEVGIAKNTNNLTFRGFQTARGQKIKVSEDALRKARALFSDDSKEETTGQEGIRSPKVRNAKDANASTFRGFQTARGQKIEVSEDALQKARALFSDDANEETTGQEGIQSPKVESAKDTNASTFRG---FQTARGQKIKVSDDALQKARALLSDDA-----KEETIGQEGIQSPKMESAKDANASGFGG-FQTARGQKVEVSDDALRKARALFSEDAKEESTALEGI-----------QGPKVESAKNTNTSMFRGFQTARGQKIKVSDDALRKARALLSDDAKETTGQEGFQSPKVKSMKDTNTSMFGG--------------FQTGRGKQIEISEDALQKARVRLSED 2949          
BLAST of mRNA_H-elongata_contig5669.13117.1 vs. uniprot
Match: A0A6H5JH10_9PHAE (BRCA-2_helical domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH10_9PHAE)

HSP 1 Score: 87.4 bits (215), Expect = 7.220e-15
Identity = 66/202 (32.67%), Postives = 93/202 (46.04%), Query Frame = 1
Query:   25 TGFRTGRGKSLCVSAEALEKTRQYFPEEVALTPRVVSGVPSATTRGTSRRPPSGMMFSTGKGRPIEVSAEALARAQSLFK-------------DGDARASPEMKHPPPPALTGGVIDSGESDGVFSTASGKSIEVSAEGLTQAKRMFQ--DPGCAAVTAPGSGNGDTTSRNHLPSSMMFSTGRGRPIEVSVEALTRAKRLFE 585
            +GF+TGRG++L VS EAL K +  F             + S      + R P+   F TG+GR + VSAEALA+ Q LF+             + +AR    ++    PA +G           F T  G+++ VSAE L + + +FQ  D G           G   SR        F TGRGR +EVS EAL + + LF+
Sbjct: 1937 SGFQTGRGRALAVSTEALAKVQHLFQGNEDXXXXXXXAMESEARGLRASRSPAASGFQTGRGRALAVSAEALAKVQHLFQGNEDXXXXXXXAMESEARG---LRASRSPAASG-----------FQTGRGRALAVSAEALAKVQHLFQGDDYGGGGSAIESQARGLRASRQPATGGSGFQTGRGRALEVSAEALAKVQHLFQ 2124          
BLAST of mRNA_H-elongata_contig5669.13117.1 vs. uniprot
Match: E2A3F8_CAMFO (Breast cancer type 2 susceptibility protein-like protein n=3 Tax=Camponotus floridanus TaxID=104421 RepID=E2A3F8_CAMFO)

HSP 1 Score: 85.9 bits (211), Expect = 2.130e-14
Identity = 94/374 (25.13%), Postives = 173/374 (46.26%), Query Frame = 1
Query:   31 FRTGRGKSLCVSAEALEKTRQYFPEEVALT-PRVVSGVPSATTRGTSRRPPSGMMFSTGKGRPIEVSAEALARAQSLFKDGDARASPEMKHPPPPALTGG--VIDSGESDGVFSTASGKSIEVSAEGLTQAKRMFQDPG------CAAVTAPGSGNGDTTSRNHLPSSMMFSTGRGRPIEVSVEALTRAKRLFEDLNPPALPKPKLLPLSNVAGDITDGGKKSLEGKEGRIFSTANGTSIKVSDEAFTWAKKMFEEPGSTEATDSRNVGEGGDRRKRESAGSKTSVQNN--TRDMFFTGTGKKVVVSAGAIARAEEMFRNVESLTEV--SFDGGCVGGGECGGGG--DSVFSTGNGRAVKVSPAAICKARNMFA 1107
            F T  G  + +S EAL K      +E+     +++    +++T   S +  +  +FST  G  I +S ++LA+A+ L +D   + +  +K+    + TGG     +  +  +FSTA GK I +S   LT+AK +  D            +     +GD+T  N++    +FST  G+ I +S ++L +AK L  D     L K   + + N    +TD            +FSTA+G  I +S+++   AK +  +    E     NV +  ++    S   + S++ N  T  +F T  GK + +S  ++A+A+ +    E   ++  +++    GG          S+FST  G+ + +S  ++ KA+ + A
Sbjct:  388 FSTASGAPINISKEALTKANILLADELEKNNDKLIKCSKTSSTDRDSTKNVTLSLFSTASGNTISISEKSLAKAKMLLEDESEKENDIIKNYEK-SFTGGNSTKSNNVTSSLFSTAGGKPINISKTSLTKAKILLADTSEKENDILIKYSDKSFIDGDSTKPNNMT---LFSTAAGKAINISEKSLAKAKILLAD----ELEKENNV-IKNSEKSLTDENSIKPNNITSSLFSTADGKPINISEKSLAKAKILLAD----ELEKENNVIKNSEK----SLTDENSIKPNNITSSLFSTADGKPINISEKSLAKAKILLTESEKENDIIKNYEKSFTGGNSTKSNNVTSSLFSTAGGKPINISKTSLTKAKILLA 744          
BLAST of mRNA_H-elongata_contig5669.13117.1 vs. uniprot
Match: UPI000623B78C (LOW QUALITY PROTEIN: breast cancer type 2 susceptibility protein homolog n=1 Tax=Linepithema humile TaxID=83485 RepID=UPI000623B78C)

HSP 1 Score: 75.9 bits (185), Expect = 4.000e-11
Identity = 97/325 (29.85%), Postives = 143/325 (44.00%), Query Frame = 1
Query:   28 GFRTGRGKSLCVSAEALEKTRQYFPEEV--ALTPRVV---SGVPSATTRGTSRRPPSGMMFSTGKGRPIEVSAEALARAQSLFKDGDARASPEMKHPPPPALTGGVIDSGESDGVFSTASGKSIEVSAEGLTQAKRMF----QDPGCAAVTAPGSG--NGDTTSRNHLPSSMMFSTGRGRPIEVSVEALTRAKRLFEDLNPPALPKPKLLPLSNVAGDITDGGKKSLEGKEGRI----FSTANGTSIKVSDEAFTWAKKMFEEPGSTEATDSRNVGEGGDRRKRESAGSKTSVQNNTRDMFFTGTGKKVVVSAGAIARAEEMFRN 957
            GF T RG S+ +S EAL + +  F  E+    TP V    SG    T    ++ P  G  F T +   I +S +AL+RA++LF       S   +          V+++  S+  F TA G SI +S + L++AK +F     D     V    SG    D      +P+   F T R     +S +AL+RAK LF           +L  +S VA +   G KK  +  E ++    F TA  TSI +S++A + AK +F    ST       V E     K E A  +  V N     F T  G  + +S  A++ A+ +F N
Sbjct:  634 GFETARGTSINISEEALSRAKTLFATELDDISTPTVAEKTSGCKKKTKXLEAKVPNFG--FQTARNTSINISEQALSRAKTLFAGELNEISTVAEKASGCKKEDKVLEAKVSNFGFQTARGTSINISEQALSKAKTLFTTEFDDISTPTVAEKASGCKEEDKELEAKVPN-FGFQTARNTSNNISEQALSRAKTLFAG---------ELNEISTVA-EKASGCKKEDKVLEAKVPNFGFQTARNTSINISEQALSRAKTLFAGELST-----LTVAEKTSAHKEEKA-VEVKVSNFG---FQTARGSCINISEQALSEAKSLFAN 936          
BLAST of mRNA_H-elongata_contig5669.13117.1 vs. uniprot
Match: UPI0011443744 (breast cancer type 2 susceptibility protein homolog isoform X1 n=4 Tax=Formica exsecta TaxID=72781 RepID=UPI0011443744)

HSP 1 Score: 73.9 bits (180), Expect = 1.660e-10
Identity = 79/320 (24.69%), Postives = 144/320 (45.00%), Query Frame = 1
Query:   31 FRTGRGKSLCVSAEALEKTRQYFPEEVAL-TPRVVSGVPSATTRGTSRRPPSGMMFSTGKGRPIEVSAEALARAQSLFKDGDARASPEMKHPPPPALTGGVIDSGESDGV----FSTASGKSIEVSAEGLTQAKRMF-----QDPGCAAVTAPGSGNGDTTSRN-HLPSSMMFSTGRGRPIEVSVEALTRAKRLFEDLNPPALPKPKLLPLSNVAGDITDGGKKSLEGKEGRIFSTANGTSIKVSDEAFTWAKKMFEEPGSTEATDSRNVGEGGDRRKRESAGSKTSVQNNTRDMFFTGTGKKVVVSAGAIARAEEMFRN 957
            F T  G  + +S +AL K +    +E      +++     ++    S +  +  +FST  G+PI +S ++L++A+ L  D   + +  +   P  + T    +S + D +    FSTA GKSI +S + L +AKR+      +D       +  S   + +++N  LP   +FST  G+ I +S ++L +AK L  D +     K   + +       TD            +FSTA G SI +S+++   AK +  +    +        E        S+  + S +N T  +F T  GK + +S  ++A+A+ +  N
Sbjct:  392 FSTASGAPINISKKALSKAKLLLADESEKDNDKLIKYSECSSMNENSAKNITLPLFSTAGGKPISISEKSLSKAKMLLADESEKENEILIKCPEKSFTD--ANSVKPDNITLPLFSTAGGKSINISEKSLAKAKRLLADESEKDSDKLIKYSERSSTDENSAKNITLP---LFSTAGGKSINISEKSLAKAKMLLADESE----KENDILIKCPEKSFTDANSMKPNNITLPLFSTAGGKSINISEKSLAKAKLLLADESEKDNDKLIKYSE-------RSSTDENSAKNITLPLFSTAGGKPINISEKSLAKAKMLLVN 695          
BLAST of mRNA_H-elongata_contig5669.13117.1 vs. uniprot
Match: A0A6P5AVM1_BRABE (uncharacterized protein LOC109487565 n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P5AVM1_BRABE)

HSP 1 Score: 72.4 bits (176), Expect = 5.660e-10
Identity = 78/256 (30.47%), Postives = 120/256 (46.88%), Query Frame = 1
Query:   28 GFRTGRGKSLCVSAEALEKTRQYFPEEVALTPRVVSGVPSATTRGTSRRPPSGMMFSTGKGRPIEVSAEALARAQSLFKDG---DARASPEMKHPPPPALTGGVIDSGESDGVFSTASGKSIEVSAEGLTQAKRM-------FQDPGCAAVTAPGSGNGDTTSRNHLPSSMMFSTGRGRPIEVSVEALTRAKRLFEDLNPPALPKPKLLPLSNVAGDITDGGKKSLEGKEGRIFSTANGTSIKVSDEAFTWAKKMF 765
            GF+T +G+ + VS ++L+  +  + E  +        +P  +   + +   +   F T  G+ I VS EAL +A++LF D        SPE      P    G  + G     F TA G+ IEVS + L  AK +       F DP   A  +P     + + +  +P    F T  G+ I VS EAL +AK LF D    +LP   + P +++   +TD G+ S  G E R F TA G  I+VS++A   A+ + 
Sbjct: 2377 GFQTAKGQKIEVSKKSLQFAKNLWKESESGFDDPAE-MPKKSPEDSEKTTVTYRGFQTAGGQKIHVSKEALQKAKALFSDDAPLPGNNSPEKS----PLADQGQSNIGTEFRGFQTAKGQKIEVSKKSLQFAKNLWKESESGFDDPAEVAKKSP-----EDSEKTTVPY-RGFQTAGGQKIHVSKEALQKAKALFSD--DASLPG-NISPENSL---LTDQGQ-SNNGTEFRGFQTAKGQKIEVSEDALQKARAIL 2614          
BLAST of mRNA_H-elongata_contig5669.13117.1 vs. uniprot
Match: UPI0013F2ABC2 (breast cancer type 2 susceptibility protein homolog isoform X1 n=2 Tax=Odontomachus brunneus TaxID=486640 RepID=UPI0013F2ABC2)

HSP 1 Score: 72.0 bits (175), Expect = 7.160e-10
Identity = 84/321 (26.17%), Postives = 136/321 (42.37%), Query Frame = 1
Query:   28 GFRTGRGKSLCVSAEALEKTRQYFPEEVALTPRVVSGVPSATTRGTSRRPPSGMMFSTGKGRPIEVSAEALARAQSLFKDGDARASPEMKHPPPPALTGGVIDSGE--------SDGVFSTASGKSIEVSAEGLTQAKRMFQDPGCAAVTAPGSGNGDTTSRNHLPSSMMFSTGRGRPIEVSVEALTRAKRLF-EDLNPPALPKPKLLPLSNVAGDITDGGKKSLEGKEGRIFSTANGTSIKVSDEAFTWAKKMF----EEPGSTEATDSRNVGEGGDRRKRESAGSKTSVQNNTRDMFFTGTGKKVVVSAGAIARAEEMF 951
            GF+T RG  + +S +AL + +  F +E+   P  V+ V  A  +      P+ + F T  G PI +S + L++A SLF         E+  P    L   V+             D  F TA G  I +S + L++AK +F       +        +   +     ++ F T RG PI +S +AL++AK LF ++LN P           NV  + +   K+      G  F TA GT I +S +A + AK +F    +EP         N+ +            + S  N     F T  G  + +S  A+++A+ +F
Sbjct:  605 GFQTARGAPINISKQALSRAKSLFAKELD-EPLEVNVVQEANIQDKEVSTPN-IGFQTAGGAPINISKQTLSKATSLFAQ-------ELNEP----LEVNVVQEASIQNKEITTPDIGFQTARGAPINISKQALSRAKSLFAKELDEPLEVNVVQEANIQDKEVSTPNIGFQTARGAPINISKQALSKAKSLFAQELNEPLE--------VNVVQETSIQNKEITTPDIG--FQTARGTPINISKQALSRAKSLFAKELDEPLEVNVVQEANIQD-----------KEVSTPNIG---FQTARGTPINISKQALSKAKSLF 888          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5669.13117.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI000C7162A72.610e-1728.14breast cancer type 2 susceptibility protein homolo... [more]
UPI000771BB056.620e-1627.44breast cancer type 2 susceptibility protein homolo... [more]
UPI0010FB46C21.560e-1524.94breast cancer type 2 susceptibility protein homolo... [more]
UPI00160189B35.370e-1525.83uncharacterized protein LOC118419819 isoform X1 n=... [more]
A0A6H5JH10_9PHAE7.220e-1532.67BRCA-2_helical domain-containing protein n=1 Tax=E... [more]
E2A3F8_CAMFO2.130e-1425.13Breast cancer type 2 susceptibility protein-like p... [more]
UPI000623B78C4.000e-1129.85LOW QUALITY PROTEIN: breast cancer type 2 suscepti... [more]
UPI00114437441.660e-1024.69breast cancer type 2 susceptibility protein homolo... [more]
A0A6P5AVM1_BRABE5.660e-1030.47uncharacterized protein LOC109487565 n=1 Tax=Branc... [more]
UPI0013F2ABC27.160e-1026.17breast cancer type 2 susceptibility protein homolo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig5669contigH-elongata_contig5669:6553..8376 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeArthropoda
Seed ortholog score124.4
Seed ortholog evalue1.1e-25
Seed eggNOG ortholog136037.KDR12341
Preferred nameBrca2
KEGG koko:K08775
KEGG Pathwayko03440,ko03460,ko05200,ko05212,ko05224,map03440,map03460,map05200,map05212,map05224
GOsGO:0000003,GO:0000075,GO:0000280,GO:0000711,GO:0000724,GO:0000725,GO:0000731,GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006355,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007049,GO:0007127,GO:0007131,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010033,GO:0010243,GO:0010468,GO:0010556,GO:0010564,GO:0010639,GO:0010778,GO:0010948,GO:0014070,GO:0016043,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0022402,GO:0022414,GO:0031323,GO:0031326,GO:0033043,GO:0033313,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0035825,GO:0040020,GO:0042221,GO:0042493,GO:0043150,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043279,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0045786,GO:0045835,GO:0046483,GO:0048285,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051129,GO:0051171,GO:0051252,GO:0051321,GO:0051445,GO:0051447,GO:0051598,GO:0051716,GO:0051726,GO:0051783,GO:0051784,GO:0060255,GO:0061982,GO:0065007,GO:0071704,GO:0071840,GO:0071897,GO:0080090,GO:0090304,GO:0097159,GO:0097305,GO:0097327,GO:0140013,GO:1901360,GO:1901362,GO:1901363,GO:1901563,GO:1901576,GO:1901698,GO:1901700,GO:1903046,GO:1903506,GO:2000112,GO:2000241,GO:2000242,GO:2001141
EggNOG free text desc.Breast cancer type 2 susceptibility
EggNOG OGs38E5R@33154,3BCP5@33208,3D028@33213,3SHZB@50557,41U7J@6656,KOG4751@1,KOG4751@2759
Ec32 ortholog descriptionNucleic acid-binding, OB-fold
Ec32 orthologEc-03_002260.2
COG Functional cat.L
Best tax levelInsecta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03036,ko03400,ko04121
Hectar predicted targeting categoryother localisation
Exons4
Model size1113
Cds size1113
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig5669.13117.1prot_H-elongata_contig5669.13117.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig5669 6553..8376 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930921.7590387-CDS-H-elongata_contig5669:6552..66611622930921.7590387-CDS-H-elongata_contig5669:6552..6661Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5669 6553..6661 +
1691679625.7876973-CDS-H-elongata_contig5669:6552..66611691679625.7876973-CDS-H-elongata_contig5669:6552..6661Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5669 6553..6661 +
1622930921.7805374-CDS-H-elongata_contig5669:6763..68031622930921.7805374-CDS-H-elongata_contig5669:6763..6803Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5669 6764..6803 +
1691679625.8036847-CDS-H-elongata_contig5669:6763..68031691679625.8036847-CDS-H-elongata_contig5669:6763..6803Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5669 6764..6803 +
1622930921.8064306-CDS-H-elongata_contig5669:7154..74771622930921.8064306-CDS-H-elongata_contig5669:7154..7477Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5669 7155..7477 +
1691679625.8211997-CDS-H-elongata_contig5669:7154..74771691679625.8211997-CDS-H-elongata_contig5669:7154..7477Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5669 7155..7477 +
1622930921.8260345-CDS-H-elongata_contig5669:7735..83761622930921.8260345-CDS-H-elongata_contig5669:7735..8376Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5669 7736..8376 +
1691679625.833049-CDS-H-elongata_contig5669:7735..83761691679625.833049-CDS-H-elongata_contig5669:7735..8376Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5669 7736..8376 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig5669.13117.1

>prot_H-elongata_contig5669.13117.1 ID=prot_H-elongata_contig5669.13117.1|Name=mRNA_H-elongata_contig5669.13117.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=371bp
TNGEAGLATGFRTGRGKSLCVSAEALEKTRQYFPEEVALTPRVVSGVPSA
TTRGTSRRPPSGMMFSTGKGRPIEVSAEALARAQSLFKDGDARASPEMKH
PPPPALTGGVIDSGESDGVFSTASGKSIEVSAEGLTQAKRMFQDPGCAAV
TAPGSGNGDTTSRNHLPSSMMFSTGRGRPIEVSVEALTRAKRLFEDLNPP
ALPKPKLLPLSNVAGDITDGGKKSLEGKEGRIFSTANGTSIKVSDEAFTW
AKKMFEEPGSTEATDSRNVGEGGDRRKRESAGSKTSVQNNTRDMFFTGTG
KKVVVSAGAIARAEEMFRNVESLTEVSFDGGCVGGGECGGGGDSVFSTGN
GRAVKVSPAAICKARNMFASD
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mRNA from alignment at H-elongata_contig5669:6553..8376+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig5669.13117.1 ID=mRNA_H-elongata_contig5669.13117.1|Name=mRNA_H-elongata_contig5669.13117.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1824bp|location=Sequence derived from alignment at H-elongata_contig5669:6553..8376+ (Himanthalia elongata Himel1 dioecious)
ACTAACGGGGAAGCAGGATTAGCGACGGGATTCAGGACCGGACGGGGGAA GTCTCTCTGCGTGTCTGCCGAGGCCTTGGAGAAGACGAGGCAGTATTTCC CAGAGGAGGGTTGCCCTACTGGGGTTCCTTCATCGCGCCGCGATTCCGAC GCTGCTGTCTGCAATGTAAGTCACGTCAGCAATCTCGACAGTGCACTTGA GCAGGGGGCAGTGGCCTTGACTCCGAGGGTGGTGTCTGGAGTACCGTCTG CGTCATTTCAAGAACGTGGAGCACATCATATATCGAGCTCGAGTATCGAT ACTCGAAGGCACTCATGTCTTGGGACCTTAGGAGGCGGTACGCCATCGGG GTTTGTTACAGGCAGAGGGGCCCCGGTCCACGTGTCCGCAGATACCCTGA AAAGGGCGACGGATTTGCTAGCGAAAAGAAGTGCAGACGATGCCGAAGAC ATTCTGCGGGTCAATCATAGCGCGGATGTTCCCTCTAATCACCCCCCCGC GGTAAAGCGCATTATCAGCGAGTTTCGTCCTTCTGGAGATGTCGTTAACT GCGGTAGCGGTGGCAGCGGTAGCGGCAATATTACCGGGGTTATCACTGGC AGGACTACACGGGGTACCAGCCGTCGACCCCCTTCCGGCATGATGTTTTC CACCGGCAAGGGAAGGCCTATAGAGGTGTCGGCTGAAGCCCTGGCGCGAG CGCAAAGTTTATTCAAAGACGGGGATGCTCGGGCTTCACCGGAAATGAAG CACCCACCCCCTCCTGCCCTTACTGGTGGTGTTATCGACAGTGGGGAGAG CGACGGCGTTTTCTCTACAGCAAGTGGCAAGTCGATTGAGGTTTCCGCCG AGGGTCTGACTCAGGCGAAGAGAATGTTCCAGGACCCGGGCTGCGCGGCA GTTACAGCCCCCGGTAGTGGGAACGGTGGCGAAAGCGACTGCCAACAGCG GGAGAGCGAGAGCGCAGATAGAAGCGGTAGCATTAGCACGAGCGTAATCG CCGCTATGCTTTCCACCAAAACTGGAAGAACCTTCGAGGTCTCCGCGGAC ACGATGACCAGAACAGAGGAGAAAATGTGCCGTAACCTCGAGTCTGGTGC TGATGTGGCGACCGGCGGGTGCTTCGGAGGCGACCAGGACGAAAGATTTG GCGACACCGGTAGTGACATTGGCGAGACTACAGGGGATACCACTAGCCGG AACCATCTGCCTTCCAGCATGATGTTTTCCACCGGCAGGGGACGACCTAT CGAGGTCTCTGTTGAAGCCCTTACGCGAGCGAAGAGGTTGTTCGAGGACC TGAATCCTCCGGCTTTGCCGAAACCGAAGCTTCTACCTCTTTCTAATGTT GCAGGCGACATTACCGACGGCGGCAAAAAAAGCCTGGAAGGGAAAGAAGG GCGAATTTTCTCCACAGCAAACGGCACATCTATCAAGGTCTCCGACGAAG CTTTTACTTGGGCAAAGAAAATGTTTGAGGAGCCGGGATCTACTGAAGCG ACTGACTCCCGAAATGTCGGCGAAGGCGGCGACAGGCGGAAGCGCGAAAG CGCCGGCAGCAAGACCAGCGTCCAGAACAACACCAGAGACATGTTTTTTA CCGGAACTGGGAAAAAGGTTGTGGTGTCCGCGGGCGCGATTGCCAGAGCA GAGGAAATGTTCCGTAATGTTGAGTCCTTGACGGAGGTGAGTTTTGACGG GGGCTGCGTGGGCGGAGGCGAATGTGGTGGCGGAGGTGATTCCGTGTTCT CCACCGGCAATGGCAGGGCGGTGAAAGTATCTCCGGCGGCTATTTGTAAG GCACGAAATATGTTCGCGAGTGAC
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Coding sequence (CDS) from alignment at H-elongata_contig5669:6553..8376+

>mRNA_H-elongata_contig5669.13117.1 ID=mRNA_H-elongata_contig5669.13117.1|Name=mRNA_H-elongata_contig5669.13117.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2226bp|location=Sequence derived from alignment at H-elongata_contig5669:6553..8376+ (Himanthalia elongata Himel1 dioecious)
ACTAACGGGGAAGCAGGATTAGCGACGGGATTCAGGACCGGACGGGGGAA
GTCTCTCTGCGTGTCTGCCGAGGCCTTGGAGAAGACGAGGCAGTATTTCC
CAGAGGAGGACTAACGGGGAAGCAGGATTAGCGACGGGATTCAGGACCGG
ACGGGGGAAGTCTCTCTGCGTGTCTGCCGAGGCCTTGGAGAAGACGAGGC
AGTATTTCCCAGAGGAGGTGGCCTTGACTCCGAGGGTGGTGTCTGGAGTA
CCGTCTGCTGGCCTTGACTCCGAGGGTGGTGTCTGGAGTACCGTCTGCGA
CTACACGGGGTACCAGCCGTCGACCCCCTTCCGGCATGATGTTTTCCACC
GGCAAGGGAAGGCCTATAGAGGTGTCGGCTGAAGCCCTGGCGCGAGCGCA
AAGTTTATTCAAAGACGGGGATGCTCGGGCTTCACCGGAAATGAAGCACC
CACCCCCTCCTGCCCTTACTGGTGGTGTTATCGACAGTGGGGAGAGCGAC
GGCGTTTTCTCTACAGCAAGTGGCAAGTCGATTGAGGTTTCCGCCGAGGG
TCTGACTCAGGCGAAGAGAATGTTCCAGGACCCGGGCTGCGCGGCAGTTA
CAGCCCCCGGTAGTGGGAACGGACTACACGGGGTACCAGCCGTCGACCCC
CTTCCGGCATGATGTTTTCCACCGGCAAGGGAAGGCCTATAGAGGTGTCG
GCTGAAGCCCTGGCGCGAGCGCAAAGTTTATTCAAAGACGGGGATGCTCG
GGCTTCACCGGAAATGAAGCACCCACCCCCTCCTGCCCTTACTGGTGGTG
TTATCGACAGTGGGGAGAGCGACGGCGTTTTCTCTACAGCAAGTGGCAAG
TCGATTGAGGTTTCCGCCGAGGGTCTGACTCAGGCGAAGAGAATGTTCCA
GGACCCGGGCTGCGCGGCAGTTACAGCCCCCGGTAGTGGGAACGGGGATA
CCACTAGCCGGAACCATCTGCCTTCCAGCATGATGTTTTCCACCGGCAGG
GGACGACCTATCGAGGTCTCTGTTGAAGCCCTTACGCGAGCGAAGAGGTT
GTTCGAGGACCTGAATCCTCCGGCTTTGCCGAAACCGAAGCTTCTACCTC
TTTCTAATGTTGCAGGCGACATTACCGACGGCGGCAAAAAAAGCCTGGAA
GGGAAAGAAGGGCGAATTTTCTCCACAGCAAACGGCACATCTATCAAGGT
CTCCGACGAAGCTTTTACTTGGGCAAAGAAAATGTTTGAGGAGCCGGGAT
CTACTGAAGCGACTGACTCCCGAAATGTCGGCGAAGGCGGCGACAGGCGG
AAGCGCGAAAGCGCCGGCAGCAAGACCAGCGTCCAGAACAACACCAGAGA
CATGTTTTTTACCGGAACTGGGAAAAAGGTTGTGGTGTCCGCGGGCGCGA
TTGCCAGAGCAGAGGAAATGTTCCGTAATGTTGAGTCCTTGACGGAGGTG
AGTTTTGACGGGGGCTGCGTGGGCGGAGGCGAATGTGGTGGCGGAGGTGA
TTCCGTGTTCTCCACCGGCAATGGCAGGGCGGTGAAAGTATCTCCGGCGG
CTATTTGTAAGGCACGAAATATGTTCGCGAGTGACGGGATACCACTAGCC
GGAACCATCTGCCTTCCAGCATGATGTTTTCCACCGGCAGGGGACGACCT
ATCGAGGTCTCTGTTGAAGCCCTTACGCGAGCGAAGAGGTTGTTCGAGGA
CCTGAATCCTCCGGCTTTGCCGAAACCGAAGCTTCTACCTCTTTCTAATG
TTGCAGGCGACATTACCGACGGCGGCAAAAAAAGCCTGGAAGGGAAAGAA
GGGCGAATTTTCTCCACAGCAAACGGCACATCTATCAAGGTCTCCGACGA
AGCTTTTACTTGGGCAAAGAAAATGTTTGAGGAGCCGGGATCTACTGAAG
CGACTGACTCCCGAAATGTCGGCGAAGGCGGCGACAGGCGGAAGCGCGAA
AGCGCCGGCAGCAAGACCAGCGTCCAGAACAACACCAGAGACATGTTTTT
TACCGGAACTGGGAAAAAGGTTGTGGTGTCCGCGGGCGCGATTGCCAGAG
CAGAGGAAATGTTCCGTAATGTTGAGTCCTTGACGGAGGTGAGTTTTGAC
GGGGGCTGCGTGGGCGGAGGCGAATGTGGTGGCGGAGGTGATTCCGTGTT
CTCCACCGGCAATGGCAGGGCGGTGAAAGTATCTCCGGCGGCTATTTGTA
AGGCACGAAATATGTTCGCGAGTGAC
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