mRNA_H-elongata_contig56687.13116.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig56687.13116.1
Unique NamemRNA_H-elongata_contig56687.13116.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig56687.13116.1 vs. uniprot
Match: D7G6R9_ECTSI (CN hydrolase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6R9_ECTSI)

HSP 1 Score: 261 bits (668), Expect = 1.180e-84
Identity = 134/195 (68.72%), Postives = 154/195 (78.97%), Query Frame = 1 
Query:    1 ERWTDTVEAAESMTGPSITRYRDLAKESGVWLSLGGFQEGVPRDQNPGASVHRSRHDQHSMSQPPPPSSAHCSMKVFNTHVIISRTGEVKAAYRKMHLFDVSIPGGAVFMESRYTEAGREMVVCDDTPAGTLGISTCYDLRFPEMYTCLAGKGSQVMLVPSAFTVPTGKAHWEVLLRARAIETQAYVIASAQVTQ 585
            E W + VEAAE +TGPS+ RY  LA+E G+WLSLGGFQE VP +    A    S  +     QP P + +H S KVFNTHV+IS  G+++AAYRK+HLFDV IPGG V MESRYT+AGREM VCDD+PAG+LG+STCYDLRFPEMYTCL G  SQV+LVPSAFTVPTG+AHWE LLRARAIETQAYVIASAQV Q
Sbjct:   48 EHWREAVEAAEPLTGPSMNRYCSLAREHGMWLSLGGFQESVPPEPVSPARHTASTEEAQESRQPVPAAESHRS-KVFNTHVVISENGDIRAAYRKIHLFDVDIPGGPVLMESRYTQAGREMSVCDDSPAGSLGLSTCYDLRFPEMYTCL-GMASQVVLVPSAFTVPTGEAHWETLLRARAIETQAYVIASAQVGQ 240
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BLAST of mRNA_H-elongata_contig56687.13116.1 vs. uniprot
Match: A0A4D9D6E8_9STRA (CN hydrolase domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D6E8_9STRA)

HSP 1 Score: 191 bits (484), Expect = 6.590e-57
Identity = 100/193 (51.81%), Postives = 124/193 (64.25%), Query Frame = 1 
Query:    7 WTDTVEAAESMTGPSITRYRDLAKESGVWLSLGGFQEGVPRDQNPGASVHRSRHDQHSMSQPPPPSSAHCSMKVFNTHVIISRTGEVKAAYRKMHLFDVSIPGGAVFMESRYTEAGREMVVCDDTPAGTLGISTCYDLRFPEMYTCLAGKGSQVMLVPSAFTVPTGKAHWEVLLRARAIETQAYVIASAQVTQ 585
            W +TV   +++ G  I+  R LAKE  +WLSLGGF E V  ++                             KV+NTHVI+   G ++A YRK+HLFDV +P G V  ESRYT  G  +VV D +P G LG+STCYDLRFPEMY  L  +G++++LVPSAFTVPTGKAHWEVLLRARAIETQ YV+A+AQV Q
Sbjct:   70 WRETVAVGQALEGSVISEMRALAKELKLWLSLGGFPEAVSAERG--------------------------DAKVYNTHVILDDDGGIQARYRKIHLFDVDVPNGPVLQESRYTLPGDRVVVVD-SPVGRLGLSTCYDLRFPEMYEALLRQGAEILLVPSAFTVPTGKAHWEVLLRARAIETQCYVVAAAQVGQ 235
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BLAST of mRNA_H-elongata_contig56687.13116.1 vs. uniprot
Match: E1ZL97_CHLVA (CN hydrolase domain-containing protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZL97_CHLVA)

HSP 1 Score: 188 bits (478), Expect = 1.420e-56
Identity = 98/194 (50.52%), Postives = 131/194 (67.53%), Query Frame = 1 
Query:    7 WTDTVEAAESMTGPSITRYRDLAKESGVWLSLGGFQEGVPRDQNPGASVHRSRHDQHSMSQPPPPSSAHCSMKVFNTHVIISRTGEVKAAYRKMHLFDVSIPGGAVFMESRYTEAGREMVVCDDTPAGTLGISTCYDLRFPEMYTCLAGK-GSQVMLVPSAFTVPTGKAHWEVLLRARAIETQAYVIASAQVTQ 585
            +++++  AE + GP++ RYR LA +SG+WLS+GGFQE  P  ++                             ++N HV+I+ +G ++A+YRK+HLFD S+P G V MESR+T AG  +V CD +PAG LG+S CYDLRFPE+Y  L  + G+QV+LVPSAFTV TG+AHWEVLLRARAIETQ YVIA+AQ  Q
Sbjct:   36 FSESLAVAEPLEGPTMQRYRQLAADSGLWLSVGGFQERGPDPEH-----------------------------LYNCHVVINASGRIQASYRKIHLFDNSVPNGPVLMESRFTAAGERLVACD-SPAGRLGLSVCYDLRFPELYQRLTYELGAQVLLVPSAFTVATGRAHWEVLLRARAIETQTYVIAAAQAGQ 199
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BLAST of mRNA_H-elongata_contig56687.13116.1 vs. uniprot
Match: A0A8J6C0R9_DIALT (CN hydrolase domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6C0R9_DIALT)

HSP 1 Score: 188 bits (477), Expect = 2.230e-55
Identity = 100/210 (47.62%), Postives = 138/210 (65.71%), Query Frame = 1 
Query:    7 WTDTVEAAESMTGPSITRYRDLAKESGVWLSLGGFQEGVPRDQNPGASVHRSRHDQHSMSQPP------------PPSSA-------HCSMKVFNTHVIISRTGEVKAAYRKMHLFDVSIPGGAVFMESRYTEAGREMVVCDDTPAGTLGISTCYDLRFPEMYTCLAGKGSQVMLVPSAFTVPTGKAHWEVLLRARAIETQAYVIASAQV 579
            +T TV  A+ ++GP ++ YR+LA++  +WLSLGGF E        GA + R+     + ++PP            PP++          S +VFNTHV++   G   AAYRK HLFDV +P G V +ESRYT  G  M V  D+P G LG++TCYDLRFPE++T LA +G++++LVPSAFTVPTG+AHW +LLRARA+ETQ +V+A+AQV
Sbjct:   59 FTQTVAQAQPLSGPRLSEYRNLARQHKLWLSLGGFHEARAPSAPAGAPM-RAATFASAAAEPPXXXXXXXXXXXSPPTAPVEAAAAPASSPRVFNTHVLLDSDGGTVAAYRKAHLFDVEVPNGPVMLESRYTAPGPAMAVVVDSPVGKLGLTTCYDLRFPELFTALARRGAELILVPSAFTVPTGEAHWHLLLRARAVETQTFVLAAAQV 267
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BLAST of mRNA_H-elongata_contig56687.13116.1 vs. uniprot
Match: A0A1D2A5W4_AUXPR (CN hydrolase domain-containing protein n=3 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A1D2A5W4_AUXPR)

HSP 1 Score: 186 bits (472), Expect = 7.620e-55
Identity = 97/192 (50.52%), Postives = 124/192 (64.58%), Query Frame = 1 
Query:   13 DTVEAAESMTGPSITRYRDLAKESGVWLSLGGFQEGVPRDQNPGASVHRSRHDQHSMSQPPPPSSAHCSMKVFNTHVIISRTGEVKAAYRKMHLFDVSIPGGAVFMESRYTEAGREMVVCDDTPAGTLGISTCYDLRFPEMYTCLA-GKGSQVMLVPSAFTVPTGKAHWEVLLRARAIETQAYVIASAQVTQ 585
            +++  A+ + GP + RYR LA  +G+WLSLGGFQE  P D +                             + NTHV++   G+  A YRK+HLFDV +P G V +ESR+T  G + V C  +PAG LG++TCYDLRFPE+Y  LA  KG+ V+LVPSAFTVPTGKAHWE+LLRARAIETQ+YVIA+AQ  Q
Sbjct:  110 ESLAQAQPLEGPLMARYRQLAASTGLWLSLGGFQEEGPDDSH-----------------------------IHNTHVVLDDRGQTAAVYRKIHLFDVDVPSGPVLLESRFTAPGSQAVTCA-SPAGVLGLTTCYDLRFPELYQHLAFDKGADVLLVPSAFTVPTGKAHWEILLRARAIETQSYVIAAAQAGQ 271
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BLAST of mRNA_H-elongata_contig56687.13116.1 vs. uniprot
Match: A0A2J8AG30_9CHLO (Nitrilase 1 (Fragment) n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J8AG30_9CHLO)

HSP 1 Score: 184 bits (467), Expect = 3.470e-54
Identity = 98/189 (51.85%), Postives = 124/189 (65.61%), Query Frame = 1 
Query:   13 DTVEAAESMTGPSITRYRDLAKESGVWLSLGGFQEGVPRDQNPGASVHRSRHDQHSMSQPPPPSSAHCSMKVFNTHVIISRTGEVKAAYRKMHLFDVSIPGGAVFMESRYTEAGREMVVCDDTPAGTLGISTCYDLRFPEMYTCLAG-KGSQVMLVPSAFTVPTGKAHWEVLLRARAIETQAYVIASAQ 576
            +T+ AA+ + GP +TRYRDLA+  G+WLSLGGFQE  P   +                             +FNTHV++  TG + A YRK+HLFDV +P G V +ESR T  G E VV D TPAG LG++TCYDLRFPE+Y  L   +G+Q++ +PSAFTV TG+AHWEVLLRARAIE QAYV+A+AQ
Sbjct:  100 ETLAAAQPLDGPLMTRYRDLARSLGLWLSLGGFQEVGPDPTH-----------------------------IFNTHVVVDDTGALVARYRKIHLFDVDVPNGPVLLESRTTAPGTEAVVVD-TPAGPLGMTTCYDLRFPELYAQLTWERGAQILAIPSAFTVITGQAHWEVLLRARAIECQAYVVAAAQ 258
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BLAST of mRNA_H-elongata_contig56687.13116.1 vs. uniprot
Match: UPI001E1DEED1 (deaminated glutathione amidase-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DEED1)

HSP 1 Score: 183 bits (464), Expect = 3.550e-54
Identity = 98/186 (52.69%), Postives = 119/186 (63.98%), Query Frame = 1 
Query:   19 VEAAESMTGPSITRYRDLAKESGVWLSLGGFQEGVPRDQNPGASVHRSRHDQHSMSQPPPPSSAHCSMKVFNTHVIISRTGEVKAAYRKMHLFDVSIPGGAVFMESRYTEAGREMVVCDDTPAGTLGISTCYDLRFPEMYTCLAGKGSQVMLVPSAFTVPTGKAHWEVLLRARAIETQAYVIASAQ 576
            ++AAE + GP++ RYR LA+E+ +WLSLGGF E  P  +                             KVFNTHVI+   G+VKAAYRK HLFDV +P    F+ES+ T  G E+VVC DTP G +G+S CYDLRFPEMY+ L   G+ V LVPSAF   TG+AHWEVLLRARAIETQ YV A+AQ
Sbjct:   34 LKAAEPLDGPTMMRYRGLARENHMWLSLGGFHETCPDRR-----------------------------KVFNTHVIVDAEGDVKAAYRKAHLFDVDLPN-VKFIESQITAPGNELVVCKDTPVGDIGMSICYDLRFPEMYSALRQAGAVVQLVPSAFMPGTGRAHWEVLLRARAIETQCYVGAAAQ 189
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BLAST of mRNA_H-elongata_contig56687.13116.1 vs. uniprot
Match: A0A022Q905_ERYGU (CN hydrolase domain-containing protein n=1 Tax=Erythranthe guttata TaxID=4155 RepID=A0A022Q905_ERYGU)

HSP 1 Score: 182 bits (461), Expect = 8.240e-54
Identity = 95/189 (50.26%), Postives = 124/189 (65.61%), Query Frame = 1 
Query:   13 DTVEAAESMTGPSITRYRDLAKESGVWLSLGGFQEGVPRDQNPGASVHRSRHDQHSMSQPPPPSSAHCSMKVFNTHVIISRTGEVKAAYRKMHLFDVSIPGGAVFMESRYTEAGREMVVCDDTPAGTLGISTCYDLRFPEMYTCLA-GKGSQVMLVPSAFTVPTGKAHWEVLLRARAIETQAYVIASAQ 576
            D++  AE + GP +T+YR LAKES +WLSLGGFQE    D +                             + NTHV+I  +G++++ YRKMHLFDV +PGGAV+ ES +TEAG E+   + TP G +G++ CYDLRFPE+Y  L    G+QV+LVP+AFT  TG+AHWE+LLRARAIETQ YVIA+AQ
Sbjct:   55 DSLSIAEPLDGPIMTKYRSLAKESNIWLSLGGFQETGSDDSH-----------------------------LRNTHVLIDDSGDIRSTYRKMHLFDVDVPGGAVYKESSFTEAGAEIAAVE-TPFGVVGLTVCYDLRFPELYQRLRFDGGAQVLLVPAAFTTVTGEAHWEILLRARAIETQCYVIAAAQ 213
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BLAST of mRNA_H-elongata_contig56687.13116.1 vs. uniprot
Match: A0A453K560_AEGTS (CN hydrolase domain-containing protein n=2 Tax=Poaceae TaxID=4479 RepID=A0A453K560_AEGTS)

HSP 1 Score: 179 bits (455), Expect = 1.790e-53
Identity = 96/189 (50.79%), Postives = 124/189 (65.61%), Query Frame = 1 
Query:   13 DTVEAAESMTGPSITRYRDLAKESGVWLSLGGFQEGVPRDQNPGASVHRSRHDQHSMSQPPPPSSAHCSMKVFNTHVIISRTGEVKAAYRKMHLFDVSIPGGAVFMESRYTEAGREMVVCDDTPAGTLGISTCYDLRFPEMYTCLAGKG-SQVMLVPSAFTVPTGKAHWEVLLRARAIETQAYVIASAQ 576
            ++V+ AE + GP + RY  LA ES +WLSLGGFQE  P D +                              +NTHV+I  +G+V+++YRK+HLFDV +PG  V+ ESR+T AG  +VV D +P G LG++ CYDLRFPE+Y CL  K  +QV+LVPSAFT  TG+AHWE+LLRARAIETQ YVIA+AQ
Sbjct:   44 ESVKLAEPLDGPIMQRYCSLANESSMWLSLGGFQERGPDDSHQ-----------------------------YNTHVLIDESGKVRSSYRKIHLFDVDVPGNMVYKESRFTTAGDTVVVVD-SPFGRLGLTVCYDLRFPELYQCLRFKHQAQVLLVPSAFTKVTGEAHWEILLRARAIETQCYVIAAAQ 202
[Close]
BLAST of mRNA_H-elongata_contig56687.13116.1 vs. uniprot
Match: J3NDL5_ORYBR (CN hydrolase domain-containing protein n=1 Tax=Oryza brachyantha TaxID=4533 RepID=J3NDL5_ORYBR)

HSP 1 Score: 181 bits (460), Expect = 3.230e-53
Identity = 96/189 (50.79%), Postives = 125/189 (66.14%), Query Frame = 1 
Query:   13 DTVEAAESMTGPSITRYRDLAKESGVWLSLGGFQEGVPRDQNPGASVHRSRHDQHSMSQPPPPSSAHCSMKVFNTHVIISRTGEVKAAYRKMHLFDVSIPGGAVFMESRYTEAGREMVVCDDTPAGTLGISTCYDLRFPEMYTCLAGKG-SQVMLVPSAFTVPTGKAHWEVLLRARAIETQAYVIASAQ 576
            ++++ AE + GP + RYR LAKES +WLSLGGFQE  P D +                              +NTHV+I  +GE++++YRK+HLFDV +PG  V+ ESR+T AG + VV  D+P G LG++ CYDLRFPE+Y CL  K  +QV+LVPSAFT  TG+AHWE+LL ARAIETQ YVIA+AQ
Sbjct:   96 ESIKIAEPLDGPIMQRYRSLAKESSMWLSLGGFQEKGPDDSHQ-----------------------------YNTHVLIDDSGEIRSSYRKIHLFDVDVPGNMVYKESRFTTAG-DTVVAVDSPFGRLGLTVCYDLRFPELYQCLRFKHQAQVLLVPSAFTKVTGEAHWEILLCARAIETQCYVIAAAQ 254
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig56687.13116.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6R9_ECTSI1.180e-8468.72CN hydrolase domain-containing protein n=1 Tax=Ect... [more]
A0A4D9D6E8_9STRA6.590e-5751.81CN hydrolase domain-containing protein n=2 Tax=Mon... [more]
E1ZL97_CHLVA1.420e-5650.52CN hydrolase domain-containing protein n=1 Tax=Chl... [more]
A0A8J6C0R9_DIALT2.230e-5547.62CN hydrolase domain-containing protein n=1 Tax=Dia... [more]
A0A1D2A5W4_AUXPR7.620e-5550.52CN hydrolase domain-containing protein n=3 Tax=Aux... [more]
A0A2J8AG30_9CHLO3.470e-5451.85Nitrilase 1 (Fragment) n=1 Tax=Tetrabaena socialis... [more]
UPI001E1DEED13.550e-5452.69deaminated glutathione amidase-like n=1 Tax=Mercen... [more]
A0A022Q905_ERYGU8.240e-5450.26CN hydrolase domain-containing protein n=1 Tax=Ery... [more]
A0A453K560_AEGTS1.790e-5350.79CN hydrolase domain-containing protein n=2 Tax=Poa... [more]
J3NDL5_ORYBR3.230e-5350.79CN hydrolase domain-containing protein n=1 Tax=Ory... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig56687contigH-elongata_contig56687:214..3146 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score265.4
Seed ortholog evalue2.1e-68
Seed eggNOG ortholog2880.D7G6R9
Preferred nameNIT1
KEGG rclassRC00096
KEGG koko:K01431,ko:K11206,ko:K20649
KEGG ReactionR00905,R04666,R08228
KEGG Pathwayko00240,ko00410,ko00770,ko00983,ko01100,map00240,map00410,map00770,map00983,map01100
KEGG ModuleM00046
GOsGO:0000257,GO:0003674,GO:0003824,GO:0004551,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009166,GO:0009536,GO:0009987,GO:0010035,GO:0010038,GO:0015959,GO:0015961,GO:0015962,GO:0015964,GO:0016462,GO:0016787,GO:0016810,GO:0016815,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042221,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046434,GO:0046483,GO:0046686,GO:0046700,GO:0047710,GO:0050896,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576
EggNOG free text desc.bis(5'-adenosyl)-triphosphatase activity
EggNOG OGsCOG0388@1,KOG0807@2759
Ec32 ortholog descriptionCarbon-nitrogen hydrolase
Ec32 orthologEc-26_000350.1
EC3.5.1.6
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko04131
Hectar predicted targeting categoryother localisation
Exons6
Model size585
Cds size585
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig56687.13116.1prot_H-elongata_contig56687.13116.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig56687 214..3146 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930921.599446-CDS-H-elongata_contig56687:213..2911622930921.599446-CDS-H-elongata_contig56687:213..291Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig56687 214..291 +
1691679625.72532-CDS-H-elongata_contig56687:213..2911691679625.72532-CDS-H-elongata_contig56687:213..291Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig56687 214..291 +
1622930921.6199856-CDS-H-elongata_contig56687:959..10251622930921.6199856-CDS-H-elongata_contig56687:959..1025Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig56687 960..1025 +
1691679625.7384174-CDS-H-elongata_contig56687:959..10251691679625.7384174-CDS-H-elongata_contig56687:959..1025Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig56687 960..1025 +
1622930921.639135-CDS-H-elongata_contig56687:1312..13891622930921.639135-CDS-H-elongata_contig56687:1312..1389Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig56687 1313..1389 +
1691679625.7499032-CDS-H-elongata_contig56687:1312..13891691679625.7499032-CDS-H-elongata_contig56687:1312..1389Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig56687 1313..1389 +
1622930921.655909-CDS-H-elongata_contig56687:1592..16741622930921.655909-CDS-H-elongata_contig56687:1592..1674Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig56687 1593..1674 +
1691679625.7584543-CDS-H-elongata_contig56687:1592..16741691679625.7584543-CDS-H-elongata_contig56687:1592..1674Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig56687 1593..1674 +
1622930921.67811-CDS-H-elongata_contig56687:2381..25431622930921.67811-CDS-H-elongata_contig56687:2381..2543Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig56687 2382..2543 +
1691679625.7671163-CDS-H-elongata_contig56687:2381..25431691679625.7671163-CDS-H-elongata_contig56687:2381..2543Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig56687 2382..2543 +
1622930921.6976566-CDS-H-elongata_contig56687:3026..31461622930921.6976566-CDS-H-elongata_contig56687:3026..3146Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig56687 3027..3146 +
1691679625.7764688-CDS-H-elongata_contig56687:3026..31461691679625.7764688-CDS-H-elongata_contig56687:3026..3146Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig56687 3027..3146 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig56687.13116.1

>prot_H-elongata_contig56687.13116.1 ID=prot_H-elongata_contig56687.13116.1|Name=mRNA_H-elongata_contig56687.13116.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=195bp
ERWTDTVEAAESMTGPSITRYRDLAKESGVWLSLGGFQEGVPRDQNPGAS
VHRSRHDQHSMSQPPPPSSAHCSMKVFNTHVIISRTGEVKAAYRKMHLFD
VSIPGGAVFMESRYTEAGREMVVCDDTPAGTLGISTCYDLRFPEMYTCLA
GKGSQVMLVPSAFTVPTGKAHWEVLLRARAIETQAYVIASAQVTQ
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mRNA from alignment at H-elongata_contig56687:214..3146+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig56687.13116.1 ID=mRNA_H-elongata_contig56687.13116.1|Name=mRNA_H-elongata_contig56687.13116.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2933bp|location=Sequence derived from alignment at H-elongata_contig56687:214..3146+ (Himanthalia elongata Himel1 dioecious)
GAGCGCTGGACTGACACCGTCGAGGCCGCCGAGTCCATGACGGGACCGTC
GATCACACGCTACCGTGATTTGGCCAAGGTTAGATACTTTACGCCCTTGC
GCTGTCATTCCAATCGAAAGGTTTATCAAAAGGTCAGACCGGAGGGTCAA
TCAAATGGCCATTTTGGGAGTAAAAAAACAACCTGAAAAAGTCGAGCCGG
TCCACCATACGAAGGTTTCGCCATCCGAGGAGATCTAGCGTTCTGCAGGA
TTGAGCTTGGAGCTAGAGCTAGAGCTAGAGCTAGAGCTAGAGCTAATAAT
TAATGGAAAATGTCTGCAATTGTTTTCGCGCCGATTGCCCTTGGCGTGTC
GTGTACGCTAGAAATATTACCAACCATAGCTCAATGTTTAATACGCAAGT
GTCCTCGACGCCTACTTACGATTATAACTCCCGCACCTATACTGCTTTTA
GTTTGTCGCGCCCGAGATTTTGATAAATAGAACACAACCCGGGAACAGGG
ATCCCCTCGCGCGAGGTTTTTCGACAGTTACCGCGTAACAAAAAAGTAGC
TCAGTCGAAATATTTTCATACCTGAGGGGTTAATCTGTCACTTCCCCCTT
ACGCAGTTAGTTGCCAATCAAATAGGGCTGGAGAGGGGATTGCCGCCCTC
GAGACTGTCACGATCTGTTCCTTGGATGAAATACCCTTACTTCCTTTTAT
CACTACCCCTCTGGCGTTTCTATCGCGGGCGATTCTTTTCTGCCAGGAGT
CGGGTGTGTGGCTATCGCTTGGGGGGTTCCAGGAAGGAGTGCCACGTGAT
CAAAATCCGGGCGTTCCCTCTGACGCAAGGGAGGGCATTCTCCCGGCTTC
GAGGTGATGGTTGCCCACAAACATTACGAGAAAATTATTTGAGCAATCTT
GACACCACGGCAGACCATTTTTCATGAAGGCCAGTTTCCATCCATCATCG
ATCATCGATCATCCATGACCGAAACAAGGTACTGTACAAGTACCCTGTTG
GGGTATGATCGGTGTGCTGTTGCGCAGCAGCCCGCATCTATTTCGTAACC
CAAACTACTCCGCACGAGGTACGTGATTGAGCAGGCGGTGCTTGCTTAGG
CATCGGTCCATCGATCCCGACATGACCAGCATTCGATGTCCCAACCTCCC
CCTCCGTCCTCAGCACATTGCTCTATGTGGGCCAGCATAAGGCACGCAAT
TATTTTTTATAAATACTAGACTATAGCAGTACCGTACCGTATTATTACCG
TACCATGATTCATGCCGCTGACGTTTTACTACTGTCGTACCATGATCCAT
CCAACCCGTCCACGTGACAGTACGGCCGTTCCGTAATCCATGTCATGATC
CATCCATACCTTCGACGTTACAGCGAGAGGAAGGTGTTCAACACCCACGT
GATAATATCAAGGACCGGCGAAGTCAAGGCCGCTTACAGAAAGATGCATC
TCTTCGATGTTGTAAGTCTTTTCTTGCGCGCCGTCAAGGTTATTTCACTT
AAGCGTTCCGCGTTTGTGGTAAGATGTTACCTCCGGTCTCCTCATCCAAA
ACCACCCTGTTGATTTGTGCTCAAGTCCCCCCCCCCCCGTGAAAACGCGA
AAGTCAAAGTTGAGAGGGTAACCATGCCCTAATTTGTACCATTTCCGTTG
CGGTACTGCAGGTAGGCACCGTGGGCACCATCGCAGTGATGGTACCCGCT
GCGAGGCTTGGCGATGCGTTGAAAAGCGCACATCGCGCGCAGATTTATAC
TATTCGTAATGCCTCTGCCGAAGGGAACGCCCTCTGATGGTGGTAAGATG
TCGGTGCTTGCCTTGCGCCACGTACCATCTAGATCAGACGGGGAGGGGGG
AGGGGCTGTACGCTTATATAAGCCCGTAACGGCGCGATCTTGGAGGAGCG
CAATAAGTATCCCAGTGATTCTACTGATACAAGAAACAACTGCTTAGGTG
ACTTCCGACGGCCATTGCTGTTTTTGATACAAATATCATCTGAAGCAACA
AAAGCTGCCTTTATTGGACACTTGAGAGTACCAAATTATGTCCCACCAAG
CTAGTCTTCAATTGAAACGTTGAAACGTAATGAATATCGTAGTGGAACGA
CCAGGCCGCTCCTATGCTGATACTCGTAGTATTGGCGCGCCTGCTTCCCG
GTGGCTTGATCGGCGCAGAGTATCCCTGGCGGGGCAGTCTTCATGGAATC
CCGCTACACCGAAGCGGGTCGCGAGATGGTGGTCTGCGACGACACTCCTG
CTGGGACGCTAGGCATATCCACGTGCTATGACCTCAGATTTCCAGAGATG
TACACCTGCCTTGCAGGAAAAGGGTCTCAGGTGTGCCGCTCTTTCTTTCT
ACTGATTTAGTGTGTCTTCGGACCTAGATGAGAGAGCTCTGTGCAGACGA
GACGCTTGCTTACCCCAAGTCCCGCTCAGCACCCAATATCGCGACCATTG
TGGATTTCTAGCTGATATCGCGGGGTCAGGATTGGCGGTGTTGGATCAGC
CCAGCGGCGGTCGCTTGATCCAAATATGGGGGGGGGAGGAACCAAATTTC
TCCCCTTCCTTCCGGGGATACAATCGTCGTATTCCCGGTCGAGGCGTTTC
AGGTGTGATATATGAACACCATAAAAGAGGGGATGTATACGTTTCGTCCT
CAGGAGGGGATATATTTCACATGTCCCCTCCATGAACCGGGGGCGTTTTC
GTAAGTTCGCCCCTCCCCCTTATCGTTTGGTCAGGAGGGGACGAGGACAC
CTTACCTCTACAGTGCGCAATGATACGCCGTTCAATACGAAACCGAATCG
ATACCTCGCGTAGGTGATGCTGGTGCCGAGCGCCTTCACCGTTCCGACGG
GGAAAGCCCACTGGGAAGTTTTACTTCGAGCCAGGGCTATCGAAACGCAG
GCGTACGTAATCGCCTCCGCCCAGGTGACGCAA
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Coding sequence (CDS) from alignment at H-elongata_contig56687:214..3146+

>mRNA_H-elongata_contig56687.13116.1 ID=mRNA_H-elongata_contig56687.13116.1|Name=mRNA_H-elongata_contig56687.13116.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1170bp|location=Sequence derived from alignment at H-elongata_contig56687:214..3146+ (Himanthalia elongata Himel1 dioecious)
GAGCGCTGGACTGACACCGTCGAGGCCGCCGAGTCCATGACGGGACCGTC
GATCACACGCTACCGTGATTTGGCCAAGGAGCGCTGGACTGACACCGTCG
AGGCCGCCGAGTCCATGACGGGACCGTCGATCACACGCTACCGTGATTTG
GCCAAGGAGTCGGGTGTGTGGCTATCGCTTGGGGGGTTCCAGGAAGGAGT
GCCACGTGATCAAAATCCGGGCGAGTCGGGTGTGTGGCTATCGCTTGGGG
GGTTCCAGGAAGGAGTGCCACGTGATCAAAATCCGGGCGCATCGGTCCAT
CGATCCCGACATGACCAGCATTCGATGTCCCAACCTCCCCCTCCGTCCTC
AGCACATTGCTCTATGCATCGGTCCATCGATCCCGACATGACCAGCATTC
GATGTCCCAACCTCCCCCTCCGTCCTCAGCACATTGCTCTATGAAGGTGT
TCAACACCCACGTGATAATATCAAGGACCGGCGAAGTCAAGGCCGCTTAC
AGAAAGATGCATCTCTTCGATGTTGAAGGTGTTCAACACCCACGTGATAA
TATCAAGGACCGGCGAAGTCAAGGCCGCTTACAGAAAGATGCATCTCTTC
GATGTTAGTATCCCTGGCGGGGCAGTCTTCATGGAATCCCGCTACACCGA
AGCGGGTCGCGAGATGGTGGTCTGCGACGACACTCCTGCTGGGACGCTAG
GCATATCCACGTGCTATGACCTCAGATTTCCAGAGATGTACACCTGCCTT
GCAGGAAAAGGGTCTCAGAGTATCCCTGGCGGGGCAGTCTTCATGGAATC
CCGCTACACCGAAGCGGGTCGCGAGATGGTGGTCTGCGACGACACTCCTG
CTGGGACGCTAGGCATATCCACGTGCTATGACCTCAGATTTCCAGAGATG
TACACCTGCCTTGCAGGAAAAGGGTCTCAGGTGATGCTGGTGCCGAGCGC
CTTCACCGTTCCGACGGGGAAAGCCCACTGGGAAGTTTTACTTCGAGCCA
GGGCTATCGAAACGCAGGCGTACGTAATCGCCTCCGCCCAGGTGACGCAA
GTGATGCTGGTGCCGAGCGCCTTCACCGTTCCGACGGGGAAAGCCCACTG
GGAAGTTTTACTTCGAGCCAGGGCTATCGAAACGCAGGCGTACGTAATCG
CCTCCGCCCAGGTGACGCAA
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