mRNA_H-elongata_contig5653.13101.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig5653.13101.1 vs. uniprot
Match: D7FVE6_ECTSI (Voltage Gated Calcium/Sodium Channel subunit alpha n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVE6_ECTSI) HSP 1 Score: 901 bits (2328), Expect = 2.990e-304 Identity = 488/771 (63.29%), Postives = 549/771 (71.21%), Query Frame = 1
Query: 1 MIYPTHHHGEFKKDNEAAGYDHSKEAVFKAFGKTFKYAKTSLWVFDELNPVRVACVKIIAHPWFDRFILFLILLNSIVLALTDWSVIDEDPDSENVWRPVAEGSWRNTLLWKSEPVFTIFFTVECMLKIIAQGFYLGRGSYLKDTWNILDFTVVVTCLMTNIPGVPRMTAXXXXXXXXXXXXXXXXXXXQKLVVSMLRSVPQLISVVILLQFIFTVFGIFGIQIFSGKQHARCRLTPYPVNNTFQIGMNYKAYRCLDVSNFDLLDEEPAWTQSSSPWATPRECWWPLDTEDERLCTVDTGYGKHKCDHDPRYMNESEFRWCGSNYDAMGNPRFTGGVIEGVEWDANSLTANATFVESLNWGYTTFDNIFVAFLSIFQSITTEGWSDILYQVKDCSLPILGDVVFIILILWGSFFTLNLLLAVLEGNVTKCKAEDKVNECVLANGIAGECSHANHACDEDSASRMTYKRSAARWQFYRDYWGREEWTIFPRSWLMPLSDLGNSSAMESPQKNGLTLSSYCGHVDETSRKTRPHDDSRYPCREGGGGIIRNDEMY-FPAWRLLLRRVVHHENFQNFMTLLIALNTVVLAMDHHPMDKDFAGYLEVFNFAFSLCFVLEMVLKLVALGPREYANDSFNLFDGFIVIIGLLELGISKPAFLEGSTGRTSGGALSPLRSFRLFRVFKLAREWESMRELLNTLGKTLRDIGNFGLLLMLFMYIYALVGLETFANRFHFGEDGRAVHIGEEGYDSAWVPRSNFDTLGNAFTTIFEASSG 2310
MIYPT HHG F+K NE GYDHSKEAVFKA GKTFKYAKTSL+VFDELNPVRVACVK IAHPWFDRFILFLI+LNS VLALTDWSVID+DP+S +V P+ +GSWRN LL++SE VFT FFT+E +LK+IAQGFYLGRGSYL+D+WNILDF VVVT LMT+IPG+ XXXXXXXXXXXXXXXXXXX IQIF+GKQH+RCRLTP+PVNN+F++GMNY YRCL VSNFD++D+EP+WTQS+SPWATPRECWWP+D+E+ERLCT ++G GKHKC+HD RYMN SEFRWCGSNYDA+GNPRF GGVIEGVEW A LT NATFV+SLNWGYT FDNIFVAFL+IFQSIT EGWSD+LYQVKDCSLPILGDV FIILILWGSFFTLNLLLAVLEGN TK K +DK E + A W +D G + A +DE E GGG+ NDE+ P WRL+LRR+V H FQN +TLLI LNT+VLA+DHHPMD++F+ YLEVFNFAFSLCF+LEM LK+ ALGPREYA D+FNLFDGFIVI GLLEL +S P L G TG KLAREW SMRELLNTLGKTL DIGNFG+LL+LFMYIYALVGL+ FANRFHF E G V IGE GY +A VPRSNFDTL NAFTTIFE SG
Sbjct: 1 MIYPTQHHGAFEKGNETPGYDHSKEAVFKACGKTFKYAKTSLYVFDELNPVRVACVKTIAHPWFDRFILFLIVLNSFVLALTDWSVIDDDPNSPDVGEPIDDGSWRNALLFESEAVFTAFFTLEFVLKVIAQGFYLGRGSYLRDSWNILDFMVVVTALMTSIPGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIQIFAGKQHSRCRLTPFPVNNSFEVGMNYTDYRCLSVSNFDVVDDEPSWTQSTSPWATPRECWWPIDSENERLCTSNSGSGKHKCEHDDRYMNLSEFRWCGSNYDALGNPRFAGGVIEGVEWGAGRLTDNATFVQSLNWGYTNFDNIFVAFLTIFQSITMEGWSDVLYQVKDCSLPILGDVFFIILILWGSFFTLNLLLAVLEGNFTKGKEDDKEAE---------------------------ERHRQALW-----------------------ADEGTNGA---------------SFIDENEE-------------EEGGGVTGNDELQDLPTWRLVLRRLVDHVKFQNSITLLIVLNTLVLALDHHPMDEEFSTYLEVFNFAFSLCFMLEMALKVAALGPREYAKDNFNLFDGFIVISGLLELILSPPDILTGETGNXXXXXXXXXXXXXXXXXXKLAREWHSMRELLNTLGKTLLDIGNFGMLLVLFMYIYALVGLQFFANRFHFNEVGEVVGIGEPGYYTAEVPRSNFDTLMNAFTTIFEILSG 693
BLAST of mRNA_H-elongata_contig5653.13101.1 vs. uniprot
Match: A0A6H5KPD7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPD7_9PHAE) HSP 1 Score: 770 bits (1989), Expect = 1.370e-258 Identity = 425/799 (53.19%), Postives = 533/799 (66.71%), Query Frame = 1
Query: 73 EAVFKAFGKTFKYAKTSLWVFDELNPVRVACVKIIAHPWFDRFILFLILLNSIVLALTDWSVIDEDPDSENVWRPVAEGSWRNTLLWKSEPVFTIFFTVECMLKIIAQGFYLGRGSYLKDTWNILDFTVVVTCLMTNIPGVPRMTAXXXXXXXXXXXXXXXXXXXQKLVVSMLRSVPQLISVVILLQFIFTVFGIFGIQIFSGKQHARCRLTPYPVNNTFQIGMNYKAYRCLDVSNFDLLDEEPAWTQSSSPWATPRECWWPLDTEDERLCTVDTGYGKHKCDHDPRYMNESEFRWCGSNYDAMGNPRFTGGV-IEGVEWDANSLTANATFVESLNWGYTTFDNIFVAFLSIFQSITTEGWSDILYQV----------------------------------------------------KDCSLPILGDVVFIILILWGSFFTLNLLLAVLEGNVTKCKAEDKVNECVLANGIAGECSHANHACDEDSASRMTYKRSAARWQFYRDYWGREEWTIFPRSWLMPLSDLGNSSAMESPQKNGLTLSSYCGHVDETSRKTRPHDDSRYPCREGGGGIIRNDEMYFPAWRLLLRRVVHHENFQNFMTLLIALNTVVLAMDHHPMDKDFAGYLEVFNFAFSLCFVLEMVLKLVALGPREYANDSFNLFDGFIVIIGLLELGISKPAFLEGSTGRTSGGALSPLRSFRLFRVFKLAREWESMRELLNTLGKTLRDIGNFGLLLMLFMYIYALVGLETFANRFHFGEDGRAVHIGEEGYDSAWVPRSNFDTLGNAFTTIFEASSG 2310
EAV+ +GK Y K+SL++F E + VRVA VK++AHPWFDRFIL +I LNSIVLALTDW+ IDEDP SE+V P+AEGSWRNTLL+++E +FT FT+E +LK+++QGF G G+YL+D WN+LDF VVVT ++T+IPG+P TA XXXXXXXXXXXXXXXXXQ LVVSML+SVPQL+SV+ILLQFIF VFGI GIQ+F+GKQH+RCRLTPYPV F+ GM+Y +RCL+ SNFD++DE+ +WTQSSSPW+TP++CWWPLDT+D RLC D G H+C+HDP Y+NES+FRWCGS+YDA+GN RF GGV +EG W +LT NATFVE L WGYTTFDNIFVAFL+IFQSIT EGWSDILYQV KDCS P+L D+ FI+L+LWG+FFTLNLLLAVLE N ++ A+ + D+ + K AA + E+ ++ +D G ++ E + G +++ V+ +R+ D G GG ++ + WR++L R+ + F +T LI LNT+ LA+DHHPMD DF+ L++ N F+LCF LEM LKLVALGPR YA D FNLFDG +V+ L+EL I P L G G GG LS LRSFR+ R+ KLAR W SMR+LL TL KTL DIGNF LLL+LFM+IY L+G++ FANR HF EDGR + IGEEGY A VPRSNFDTL +AFTT+FE SG
Sbjct: 25 EAVYDFYGKHLVYPKSSLYLFSEKSRVRVAFVKLVAHPWFDRFILLVIALNSIVLALTDWTRIDEDPSSEHVGEPIAEGSWRNTLLYETESMFTAIFTLEFVLKVVSQGFIFGHGAYLRDAWNVLDFVVVVTAVLTSIPGMPTATAIRXXXXXXXXXXXXXXXXXQHLVVSMLKSVPQLVSVLILLQFIFVVFGILGIQLFAGKQHSRCRLTPYPVTTAFETGMDYADHRCLEASNFDVVDEDNSWTQSSSPWSTPQDCWWPLDTDDTRLCAFDDSPGNHQCEHDPAYLNESDFRWCGSDYDALGNRRFEGGVTLEGSPWGGWNLTDNATFVEDLAWGYTTFDNIFVAFLTIFQSITLEGWSDILYQVVVDCVCVCVLFFVLFQGHCRRRRXXXXXXXXXXTRRRAWSLGGCGAFFRWQVKDCSRPVLADLFFIVLVLWGAFFTLNLLLAVLENNFSQGXXXXXXXXXXXXXXXXXXX-XADSSIDDVLGVSVEEKAIAAEREV-------EDGEAGVKAAAXXXAD-GLAATEEGRRTGGGEGAAWGLGVEGGTREELLSDRCHSISSSGSGG---SETEGYRDWRVILWRLTASDAFLRSITTLIILNTLTLALDHHPMDDDFSTVLDLLNLVFTLCFALEMALKLVALGPRGYAKDKFNLFDGLVVLSSLVELAIWPPNILTGGEGEDWGGGLSALRSFRVLRILKLARGWSSMRDLLETLRKTLLDIGNFALLLLLFMFIYVLIGVQFFANRLHFAEDGRVIGIGEEGYYDAKVPRSNFDTLLHAFTTVFEVLSG 811
BLAST of mRNA_H-elongata_contig5653.13101.1 vs. uniprot
Match: A0A6H5JJ68_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ68_9PHAE) HSP 1 Score: 704 bits (1817), Expect = 1.490e-247 Identity = 355/451 (78.71%), Postives = 397/451 (88.03%), Query Frame = 1
Query: 1 MIYPTHHHGEFKKDNEAAGYDHSKEAVFKAFGKTFKYAKTSLWVFDELNPVRVACVKIIAHPWFDRFILFLILLNSIVLALTDWSVIDEDPDSENVWRPVAEGSWRNTLLWKSEPVFTIFFTVECMLKIIAQGFYLGRGSYLKDTWNILDFTVVVTCLMTNIPGVPRMTAXXXXXXXXXXXXXXXXXXXQKLVVSMLRSVPQLISVVILLQFIFTVFGIFGIQIFSGKQHARCRLTPYPVNNTFQIGMNYKAYRCLDVSNFDLLDEEPAWTQSSSPWATPRECWWPLDTEDERLCTVDTGYGKHKCDHDPRYMNESEFRWCGSNYDAMGNPRFTGGVIEGVEWDANSLTANATFVESLNWGYTTFDNIFVAFLSIFQSITTEGWSDILYQVKDCSLPILGDVVFIILILWGSFFTLNLLLAVLEGNVTKCKAEDKVNECVLANGIAGECSH 1353
MIYPT HHG F+K NE GYDHSKEAVFKA GKTFKYAKTSL+VFDELNPVRVACVK IAHPWFDRFILFLI+LNS VLALTDWSVID+DP+S +V P+ +GSWRN LL++SE VFT FFT+E +LK+IAQGFYLGRGSYL+D+WNILDF VVVT LMT+IPG+ XXXXXXXXXXXXXXXXXXXQKLVV MLRSVPQL+SVVILLQFIFTVFGIFGIQIF+GKQH+RCRLTP+PVNN+F++GMNY YRCL VSNFD++D+EP+WTQS+SPWATPRECWWP+D+EDERLCT ++G GKHKC+HD RYMN SEFRWCGSNYDA+GNPRF GG+IEGVEW + LT NATFV+SLNWGYT FDNIFVAFL+IFQSIT EGWSDILYQ+KDCSLPILGDV FIILILWGSFFTLNLLLAVLEGN TK K +DKV + C H
Sbjct: 1 MIYPTQHHGAFEKGNETPGYDHSKEAVFKACGKTFKYAKTSLYVFDELNPVRVACVKTIAHPWFDRFILFLIVLNSFVLALTDWSVIDDDPNSPDVGEPIDDGSWRNALLFESEAVFTAFFTLEFVLKVIAQGFYLGRGSYLRDSWNILDFMVVVTALMTSIPGMXXXXXXXXXXXXXXXXXXXXXXXXQKLVVGMLRSVPQLVSVVILLQFIFTVFGIFGIQIFAGKQHSRCRLTPFPVNNSFEVGMNYADYRCLSVSNFDVVDDEPSWTQSTSPWATPRECWWPIDSEDERLCTSNSGSGKHKCEHDERYMNLSEFRWCGSNYDALGNPRFAGGMIEGVEWGSGRLTDNATFVQSLNWGYTNFDNIFVAFLTIFQSITMEGWSDILYQIKDCSLPILGDVFFIILILWGSFFTLNLLLAVLEGNFTKGKEDDKVMSLMFTGDYICSCRH 451
BLAST of mRNA_H-elongata_contig5653.13101.1 vs. uniprot
Match: D8LI93_ECTSI (Similar to sodium channel, voltage-gated, type IX, alpha isoform 5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI93_ECTSI) HSP 1 Score: 479 bits (1233), Expect = 1.540e-148 Identity = 256/524 (48.85%), Postives = 310/524 (59.16%), Query Frame = 1
Query: 742 MNYKAYRCLDVSNFDLLDEEPAWTQSSSPWATPRECWWPLDTEDERLCTVDTGYGKHKCDHDPRYMNESEFRWCGSNYDAMGNPRFTGGV-IEGVEWDANSLTANATFVESLNWGYTTFDNIFVAFLSIFQSITTEGWSDILYQVKDCSLPILGDVVFIILILWGSFFTLNLLLAVLEGNVTKCKAEDKVNECVLANGIAGECSHANHACDEDSASRMTYKRSAARWQFYRDYWGREEWTIFPRSWLMPLSDLGNSSAMESPQKNGLTLSSYCGHVDETSRKTRPHDDSRYPCREGGGGIIRNDEMYFPAWRLLLRRVVHHENFQNFMTLLIALNTVVLAMDHHPMDKDFAGYLEVFNFAFSLCFVLEMVLKLVALGPREYANDSFNLFDGFIVIIGLLELGISKPAFLEGSTGRTSGGALSPLRSFRLFRVFKLAREWESMRELLNTLGKTLRDIGNFGLLLMLFMYIYALVGLETFANRFHFGEDGRAVHIGEEGYDSAWVPRSNFDTLGNAFTTIFEASSG 2310
M+Y +RCL+ SNFD++DE+ +WTQSSSPW+TP++CWWPLDT+D RLC D G H+C+HDP Y+NES+FRWCGS+YDA+GN RF GGV +EG W +LT NATFVE L WGYTTFDNIFVAFL+IFQSIT EGWSDILYQVKDCS P+L D+ FI+L+LWG+FFTLNLLLAVLE N ++ K + D+ +S E + +T LI LNT+ LA+DHHPMD++F+ L++ N F+LCF LEM LKLVALGPR YA D FNLFDG +V+ L+EL I P L G G GG LS LRSFR+ R+ KLAR W SMR+LL TL KTL DIGNF LLL+LFM+IY L+G++ FANR HF EDGR + IGEEGY A VPRSNFDTL +AFTT+FE SG
Sbjct: 1 MDYADHRCLEASNFDVVDEDNSWTQSSSPWSTPQDCWWPLDTDDTRLCAFDGSPGNHQCEHDPAYLNESDFRWCGSDYDALGNRRFEGGVTLEGSPWGGWNLTDNATFVEDLAWGYTTFDNIFVAFLTIFQSITLEGWSDILYQVKDCSRPVLADLFFIVLVLWGAFFTLNLLLAVLENNFSQGKXXXXXXXXXXXXXXXXXXXX-----------------------------------XXXXXXXXXIDDVLGASVEE----------------------------------------------------------------KRSITTLIILNTLTLALDHHPMDEEFSTVLDLLNLVFTLCFALEMALKLVALGPRGYAKDKFNLFDGLVVLSSLVELAIWPPDILTGGDGEDWGGGLSALRSFRVLRILKLARGWSSMRDLLETLRKTLLDIGNFALLLLLFMFIYVLIGVQFFANRLHFAEDGRVIGIGEEGYYDAEVPRSNFDTLLHAFTTVFEVLSG 425
BLAST of mRNA_H-elongata_contig5653.13101.1 vs. uniprot
Match: A0A7S2QWF6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2QWF6_9STRA) HSP 1 Score: 423 bits (1088), Expect = 5.760e-126 Identity = 287/798 (35.96%), Postives = 401/798 (50.25%), Query Frame = 1
Query: 70 KEAVFKAFGKTFKYAKTSLWVFDELNPVRVACVKIIAHPWFDRFILFLILLNSIVLALTDWSVIDED----------PDSENVWRPVAEGSWRNTLLWKSEPVFTIFFTVECMLKIIAQGFYLGRGSYLKDTWNILDFTVVVTCLMTNIPGVPRMTAXXXXXXXXXXXXXXXXXXXQKLVVSMLRSVPQLISVVILLQFIFTVFGIFGIQIFSGKQHARCRLTPYPVNNTFQI---GMNYKAYRCLD--------VSNFDL----LDEEPAWTQSSSPWATPRECWWPLDTEDERLCTVDTGYGKHKCDHDPRYMNESEFRWCGSNYDAMGNPRFTGGVI----EGVEWDANSLT--ANATFVES------------LNWGYTTFDNIFVAFLSIFQSITTEGWSDILYQVKDCSLPILGDVVFIILILWGSFFTLNLLLAVLEGNVTKCKAEDKVNECVLANGIAGECSHANHACDEDSASRMTYKRSAARWQFYRDYWGREEWTIFPRSWLMPLSDLGNSSAMESPQKNGLTLSSYCGHVDETSRKTRPHDDSRYPCREGGGGIIRNDEMYFPAWRLLLRRVVHHENFQNFMTLLIALNTVVLAMDHHPMDKDFAGYLEVFNFAFSLCFVLEMVLKLVALGPREYANDSFNLFDGFIVIIGLLELGISKPAFLEGST--GRTSGGALSPLRSFRLFRVFKLAREWESMRELLNTLGKTLRDIGNFGLLLMLFMYIYALVGLETFANRFHFGEDGRAVHIG----EEG--YDSAWVPRSNFDTLGNAFTTIFEASSG 2310
KE F+ G + +A+TSL NPVR VKI+ H F+ IL I +NSI+LA TD+S + D PD+ + S+RN + K +PVFT F +EC++K+IA GF SYL+D+WN LDF +VV L+ + ++ Q +V S+L S+P L SV++L+ F+F +FGI G Q+F G H RCRLTPYPV ++ G NY ++C+ +NFD+ LD+E +SPW ++C+WPL + D R CT+D G G H C HD + ++ + WCGSNYDA GNPRF G + EG+ ++ ++ ++ T++ N+G TTFDN AF+SIFQSIT EGW DI+Y D S +L F ILI++GSFF LNLLLAVLE N K E + A E + DE + + A + ++ PL ++ +++A FQ F+T +I +NTVVLA + PM LE+ NF +L F +EM +KL G +Y +D N+FDG IV+I ++ELGI+ P F+ ST G + G +S LRSFRLFR+FKLAREW SMR +L + T +I NF +LL LFMYIYAL+G++ FAN+F F +DG A+ IG +EG ++ R NFD AF TIF+ SG
Sbjct: 44 KEYNFEVNGVQYDFAETSLQCLSSQNPVRKFAVKIMLHWSFEFLILLAIGINSILLACTDYSTVRLDVAKSDFEYGEPDTR------CDKSYRNCIQEKLDPVFTAIFIIECVVKVIALGFVSHENSYLRDSWNKLDFVIVVMSLVGMLGLDINVSVIRTFRVLRPLKTLSALPGLQLIVRSLLASIPALSSVIVLIMFVFCIFGILGNQLFVGITHQRCRLTPYPVTPDYRWELHGSNYSDFQCIPNYKTYSGKETNFDIIVSSLDKE------TSPWYVAQDCYWPL-SNDGRTCTLDGGSGAHVCVHDVESIPKTSWSWCGSNYDAWGNPRFNGEINVTMPEGIPYNEATIPDGSHVTYLTKERFNSMPIYNGDKNFGMTTFDNFPRAFVSIFQSITMEGWVDIMYICGDASSKLLASTFFGILIIFGSFFVLNLLLAVLEENYATGKDEQEAE--------AKEKLEGQDSDDEGXXXDEAHHKEADHF------------------FIQPLKEIADNNA-----------------------------------------------------------------FQTFVTAMIVINTVVLACETFPMATSTDSTLEMINFILTLVFAVEMGVKLGGYGIVDYLSDEMNVFDGLIVLISIVELGIAPPDFISSSTSTGGVNIGGISALRSFRLFRIFKLAREWVSMRIILTKIVLTAIEISNFSVLLALFMYIYALMGMQFFANKFKFDDDGLAIPIGSPHPQEGTPWEKIHSERHNFDDFHFAFVTIFQILSG 737
BLAST of mRNA_H-elongata_contig5653.13101.1 vs. uniprot
Match: A0A225VQ21_9STRA (Voltage-gated Ion Channel n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VQ21_9STRA) HSP 1 Score: 403 bits (1035), Expect = 6.570e-119 Identity = 272/744 (36.56%), Postives = 380/744 (51.08%), Query Frame = 1
Query: 145 NPVRVACVKIIAHPWFDRFILFLILLNSIVLALTDWSVIDEDPDSENVWRPVAEG------SWRNTLLWKSEPVFTIFFTVECMLKIIAQGFYLGRGSYLKDTWNILDFTVVVTCLMTNIPGVPRMTAXXXXXXXXXXXXXXXXXXXQKLVVSMLRSVPQLISVVILLQFIFTVFGIFGIQIFSGKQHARCRLTPYPVNNTF----------------QIGMNYKAYRCLDVSNFDLLDEEPAWTQSSSPWATPRECWWPLDTEDERLCTVDTGYGKHKCDHDPRYMNESEFRWCGSNYDAMGNPRFTGGVIEGVEWDANSLTANATFVESLNWGYTTFDNIFVAFLSIFQSITTEGWSDILYQVKDCSLPILGDVVFIILILWGSFFTLNLLLAVLEGNVTKCKAEDKVNECVLANGIAGECSHANHACDEDSASRMTYKRSAARWQFYRDYWGREEWTIFPRSWLMPLSDLGNSSAMESPQKNGLTLSSYCGHVDETSRKTRPHDDSRYPCREGGGGIIRNDEMYFPAWRLLLRRVVHHENFQNFMTLLIALNTVVLAMDHHPMDKDFAGYLEVFNFAFSLCFVLEMVLKLVALGPREYANDSFNLFDGFIVIIGLLELGISKPAFLEGSTGRTSGGALSPLRSFRLFRVFKLAREWESMRELLNTLGKTLRDIGNFGLLLMLFMYIYALVGLETFANRFHFGEDGRAVHIGEEGYDSAWVPRSNFDTLGNAFTTIFEASSG 2310
N +R C +++ H +FDRFI+ I+ NS++L L+D+SV+D + + + EG S N ++ SE FT+ FTVEC+LKIIA G Y GRGSY KDTWN+LDF VVV+ L+ ++PG+P XXXXXXXXXXXXXXX ++L+ ++L+++P L +VVIL GIQ+F G + RCR+T +P+ F Q+ N AY C+D D D +T +SPW TP++C+WP+D D LC G H+C+ + + CGS+YD GNPRF + A ++ SL+WG TTFDNI AF +IFQSIT EGW+ I+Y V D S P +G + F++LI++ SFF +NL LAV+ EE+ + + G ++A + ++ L + R R H W L VV H+ F F+ +I NTVVLA+DH+PM LE+ NFA S FV+EMV+KL LG R+YA D FNLFD FIV +G+LE S P+F+ + + GA+S LRSF R+W+S+RELL + + + I NFG+LL LF+YIYALVG++ F N F +G EG+ VPR+NFDTL A T+F+ +G
Sbjct: 51 NKLRELCAQLVTHRYFDRFIIAAIVANSVILGLSDFSVVDSSLNPASSGKRWVEGKLVNAYSLPNHIVEVSEVPFTVIFTVECVLKIIAMGIY-GRGSYEKDTWNVLDFFVVVSSLVASLPGMPXXXXXXXXXXXXXXXXXXXIPGMRRLIAALLKALPALGNVVILQXXXXXXXXXLGIQLFGGSMNRRCRVTQFPIKLPFDDTNVAVWPVPNEYLEQVKANETAYYCMDAPLLDYEDTTDTYTMETSPWNTPQDCFWPVDDNDTLLCVAPGQAGNHECNFN---------KTCGSDYDTYGNPRFR----------HHKAMIYALYLPSLDWGLTTFDNIGRAFFTIFQSITQEGWTIIMYMVMDSSQPAIGAIFFVVLIIFASFFVMNLTLAVIS----------------------------------------------------------EEFNVDEKP--------GKTAAQKREEERRAKL-----ERENAERLAREH------------------------W---LNAVVSHKFFAGFIMAVIMANTVVLALDHYPMPTKMDEDLEIVNFALSCVFVVEMVMKLFGLGLRQYARDRFNLFDAFIVTMGILETIASPPSFMSSNPPKK--GAVSALRSFXXXXXXXXXRDWKSLRELLEMIIRAVASITNFGVLLFLFIYIYALVGVQFFGNTMRFDPEGYPTPYTLEGFWDGTVPRNNFDTLLWAAVTVFQIITG 674
BLAST of mRNA_H-elongata_contig5653.13101.1 vs. uniprot
Match: W2QUR8_PHYPN (Uncharacterized protein n=12 Tax=Phytophthora TaxID=4783 RepID=W2QUR8_PHYPN) HSP 1 Score: 398 bits (1023), Expect = 3.600e-117 Identity = 274/744 (36.83%), Postives = 383/744 (51.48%), Query Frame = 1
Query: 145 NPVRVACVKIIAHPWFDRFILFLILLNSIVLALTDWSVIDEDPDSENVWRPVAEG------SWRNTLLWKSEPVFTIFFTVECMLKIIAQGFYLGRGSYLKDTWNILDFTVVVTCLMTNIPGVPRMTAXXXXXXXXXXXXXXXXXXXQKLVVSMLRSVPQLISVVILLQFIFTVFGIFGIQIFSGKQHARCRLTPYPVNNTF----------------QIGMNYKAYRCLDVSNFDLLDEEPAWTQSSSPWATPRECWWPLDTEDERLCTVDTGYGKHKCDHDPRYMNESEFRWCGSNYDAMGNPRFTGGVIEGVEWDANSLTANATFVESLNWGYTTFDNIFVAFLSIFQSITTEGWSDILYQVKDCSLPILGDVVFIILILWGSFFTLNLLLAVLEGNVTKCKAEDKVNECVLANGIAGECSHANHACDEDSASRMTYKRSAARWQFYRDYWGREEWTIFPRSWLMPLSDLGNSSAMESPQKNGLTLSSYCGHVDETSRKTRPHDDSRYPCREGGGGIIRNDEMYFPAWRLLLRRVVHHENFQNFMTLLIALNTVVLAMDHHPMDKDFAGYLEVFNFAFSLCFVLEMVLKLVALGPREYANDSFNLFDGFIVIIGLLELGISKPAFLEGSTGRTSGGALSPLRSFRLFRVFKLAREWESMRELLNTLGKTLRDIGNFGLLLMLFMYIYALVGLETFANRFHFGEDGRAVHIGEEGYDSAWVPRSNFDTLGNAFTTIFEASSG 2310
+ +R CV+++ H +FDRFI+ I+ NSI+L L+D+SV+D + + + + +G S +N ++ SE FTI FT EC+LKIIA G + GRGSY KD WN+LDF VVV+ L+ ++PG+P XXXXXXXXXXXXXXX ++L+ ++L+++P L +VVIL GIQ+F G + RCRLT +PV Q+ MN +AY C+D D D +T+ +SPW TP+ C+WP+D EDE LC G H C+ + CGS+YDA GNPRF+ + A + SL+WG TTFDNI AF +IFQSIT EGW+ I+Y V D S P +G + F++LI++ SFF +NL LAV+ EE+ + QK G T + E R+ + RE + R W L VV H+ F F+ +I NT +LA+DH+PM LE+ NFA S FV+EM++KL LG R+Y+ D FNLFD FIV +G+LE S P+F+ + + GA+S LRSF R+W+S+RELL + + + I NFG+LL LF+YIYALVG++ F N F E+G E + + VPR+NFDTL A T+F+ +G
Sbjct: 59 HKLRRWCVQVVTHKYFDRFIIAAIVANSIILGLSDFSVVDSELNPASTGKKCQDGGLVDAYSLQNHIVEISELPFTIIFTAECILKIIAMGVH-GRGSYGKDMWNVLDFFVVVSSLVASLPGMPXXXXXXXXXXXXXXXXXXXIPGMRRLIAALLKALPALGNVVILQXXXXXXXXXLGIQLFGGSMNRRCRLTSFPVKLPLDDMNEAIWPVPKEYIDQVKMNEEAYFCIDAPLLDYEDSAGDYTKETSPWNTPQSCFWPVDDEDEFLCAAKGQAGNHACNIG---------KTCGSDYDAFGNPRFS----------HHKAMDYALYRPSLDWGLTTFDNIGRAFFTIFQSITQEGWTVIMYMVMDSSQPTIGAIFFVVLIIFASFFVMNLTLAVIS----------------------------------------------------------EEFNL--------------------DQKPGKTAA----QKREEERRAKLE-------RENAEKLAREH------W---LNAVVSHKLFSGFIMAVILANTAILALDHYPMPTKMDEDLEIVNFALSCVFVIEMIMKLFGLGLRQYSRDRFNLFDAFIVTMGILETIASPPSFMSSNPPKK--GAVSALRSFXXXXXXXXXRDWKSLRELLEMIIRAVASITNFGVLLFLFIYIYALVGVQFFGNTMRFDEEGYPTPFNLEEFWNGTVPRNNFDTLLWAAVTVFQIITG 682
BLAST of mRNA_H-elongata_contig5653.13101.1 vs. uniprot
Match: A0A0P1B727_PLAHL (Voltage-gated ion channel superfamily n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B727_PLAHL) HSP 1 Score: 395 bits (1015), Expect = 4.360e-116 Identity = 276/744 (37.10%), Postives = 384/744 (51.61%), Query Frame = 1
Query: 145 NPVRVACVKIIAHPWFDRFILFLILLNSIVLALTDWSVIDEDPDSENVWRPVAEG------SWRNTLLWKSEPVFTIFFTVECMLKIIAQGFYLGRGSYLKDTWNILDFTVVVTCLMTNIPGVPRMTAXXXXXXXXXXXXXXXXXXXQKLVVSMLRSVPQLISVVILLQFIFTVFGIFGIQIFSGKQHARCRLTPYPV-------NNTF---------QIGMNYKAYRCLDVSNFDLLDEEPAWTQSSSPWATPRECWWPLDTEDERLCTVDTGYGKHKCDHDPRYMNESEFRWCGSNYDAMGNPRFTGGVIEGVEWDANSLTANATFVESLNWGYTTFDNIFVAFLSIFQSITTEGWSDILYQVKDCSLPILGDVVFIILILWGSFFTLNLLLAVLEGNVTKCKAEDKVNECVLANGIAGECSHANHACDEDSASRMTYKRSAARWQFYRDYWGREEWTIFPRSWLMPLSDLGNSSAMESPQKNGLTLSSYCGHVDETSRKTRPHDDSRYPCREGGGGIIRNDEMYFPAWRLLLRRVVHHENFQNFMTLLIALNTVVLAMDHHPMDKDFAGYLEVFNFAFSLCFVLEMVLKLVALGPREYANDSFNLFDGFIVIIGLLELGISKPAFLEGSTGRTSGGALSPLRSFRLFRVFKLAREWESMRELLNTLGKTLRDIGNFGLLLMLFMYIYALVGLETFANRFHFGEDGRAVHIGEEGYDSAWVPRSNFDTLGNAFTTIFEASSG 2310
+ +R CV++IAH +FDRFI+ I+ NSI+L L+D+SV+D + + + + G S +N ++ SE FTI FT EC+LKIIA G Y G+GSY +D WN+LDF VVV+ L+ ++PG+P XXXXXXXXXXXXXXX ++L+ ++L+++P L +VVIL GIQ+F G + RCRLT +PV N T Q+ N + Y C+D D D +T+ +SPW+T + C+WP+D +DE LC G H C ++CGS++DA GNPRF+ A + SL+WG TTFDNI AF +IFQSIT EGW+ I+Y V D S P +G + F+ LI++ SFF +NL LAV+ ++ N D+ T KR R R+ L D R + H W L VV H+ F F+ +I NT VLA+DH+PM + LE+ NFA S FVLEMV+KL LG R+Y+ D FNLFD FIV +G+LE S P+F+ + + GA+S LRSFRL LAR+W+S+RELL + + + I NFG+LL LF+YIYAL+G++ F N F +G + + + VPR+NFDTL A T+F+ +G
Sbjct: 57 HKLREWCVELIAHKYFDRFIIAAIVANSIILGLSDFSVVDTELNPASSGKTYINGKLIDAYSLQNHIVEFSELPFTIIFTGECVLKIIAMGIY-GKGSYGQDMWNVLDFFVVVSSLVASLPGMPXXXXXXXXXXXXXXXXXXXIPGMRRLIAALLKALPALGNVVILQXXXXXXXXXLGIQLFGGSMNRRCRLTTFPVKLPLNEMNETIWPIPQGYLDQVTANEENYLCIDAPLLDYEDSVGHYTKETSPWSTAQPCFWPVDEQDEFLCAATGQAGNHAC---------KIGKFCGSDWDAFGNPRFSN----------RKAMDYALYRPSLDWGLTTFDNIGRAFFTIFQSITQEGWTAIMYMVMDSSQPTIGAIFFVGLIIFASFFVMNLTLAVIS---------EEFN------------------LDQKPGKTSTQKREEER-----------------RAKL---------------------------DRDNAERLAKEH------------------------W---LNAVVSHKLFAGFIMAVILANTAVLALDHYPMPTEMDEDLEIVNFALSCVFVLEMVMKLFGLGLRQYSRDRFNLFDAFIVTMGILETVASPPSFMSNNPPKK--GAVSALRSFRLXXXXXLARDWKSLRELLEMIFRAVASITNFGVLLFLFIYIYALIGVQFFGNTMRFDNEGYSTPFNLDEFWDGTVPRNNFDTLLWAAVTVFQIITG 680
BLAST of mRNA_H-elongata_contig5653.13101.1 vs. uniprot
Match: A0A2D4C6S1_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C6S1_PYTIN) HSP 1 Score: 391 bits (1004), Expect = 1.280e-114 Identity = 278/757 (36.72%), Postives = 393/757 (51.92%), Query Frame = 1
Query: 82 FKAFGKTFKYAKTSLWVFDELNPVRVACVKIIAHPWFDRFILFLILLNSIVLALTDWSVIDEDPDSENVWRPVAEGSWRNTLLWKSEPVFTIFFTVECMLKIIAQGFYLGRGSYLKDTWNILDFTVVVTCLMTNIPGVPRMTAXXXXXXXXXXXXXXXXXXXQKLVVSMLRSVPQLISVVILLQFIFTVFGIFGIQIFSGKQHARCRLTPYPVN----------NTFQ--IGMNYKAYRCLDVSNFDLLDEEPAWTQSSSPWATPRECWWPL-DTEDERLCTVDTGYGKHKCDHDPRYMNESEFRWCGSNYDAMGNPRFTGGVIEGVEWDANSLTANATFVESLNWGYTTFDNIFVAFLSIFQSITTEGWSDILYQVKDCSLPILGDVVFIILILWGSFFTLNLLLAVLEGNVTKCKAEDKVNECVLANGIAGECSHANHACDEDSASRMTYKRSAARWQFYRDYWGREEWTIFPRSWLMPLSDLGNSSAMESPQKNGLTLSSYCGHVDETSRKTRPHDDSRYPCREGGGGIIRNDEMYFPAWRLLLRRVVHHENFQNFMTLLIALNTVVLAMDHHPMDKDFAGYLEVFNFAFSLCFVLEMVLKLVALGPREYANDSFNLFDGFIVIIGLLELGISKPAFLEGSTGRTSGGA-LSPLRSFRLFRVFKLAREWESMRELLNTLGKTLRDIGNFGLLLMLFMYIYALVGLETFANRFHFGEDGRAVHIGEEGYDSAWVPRSNFDTLGNAFTTIFEASSG 2310
F A GK F +A SL +F E + R V I FD+FILFLI NSI+LA+ D+S +DE D + + S+RN ++ ++ +FT FTVEC LKIIA G + +G+YL D WN LDF VV L+ IPG+ XXXXXXXXXXXXXXXXXXX+KL+ ++L+S+P+L G+ G+Q++SG H+RCRLTPYPV T+Q + N+ YRC N D + +WT +SPW PR+C+WP+ D + C++D G C + CGS+YDA GN RF E D L A AT L+WG FDNI A L+IFQ IT EGW+DI+Y ++D I+ F+ I++GS+F LNL LAV+ N ++ ++ +E R +++ N E +GL S+ R + RV+ H+ F+ T LI LNTV+L++D +P D+ +EV +F ++ F +E +LK+ ALG R++ D +NLFD +V++G++EL +S P F G + G A LS LRSFRLF +F+LAR W S+++LL T+ TLR++GNF +L +LFMYIYAL+G++TFAN+F F G E Y ++PRSNFDTL + T+F+ +G
Sbjct: 84 FYAHGKRFLFAPLSLGLFPESSRFRQLVVWCITSKRFDQFILFLIFANSIILAIADYSKVDEHGDLD------SSRSYRNAVVNYADSIFTALFTVECSLKIIAMGMFGEKGAYLMDPWNGLDFAVVFVGLLATIPGIXXXXXXXXXXXXXXXXXXXXXXXXKKLINALLKSIPELXXXXXXXXXXXXXXGVIGVQLWSGVLHSRCRLTPYPVRLDSNITLESLATYQDLVVRNFSQYRC-SFKNGDPIPAIGSWTHDTSPWRHPRQCFWPIADESPAQTCSLD-GVSNRLC---------PAGQTCGSDYDAFGNFRFR---HPREEMDHYLLRA-ATHNPDLSWGLVNFDNIAAAALAIFQCITREGWTDIMYSLQDAGFNIIAVGYFVSFIIFGSYFMLNLTLAVIWENFSESSFQE---------------------AEERKRQRKLHQQ--------------------------------NGPKRERHVSDGLATSTI---------------------------------------RRFVYRVITHKLFEWLRTTLILLNTVILSLDQYPSDEKVEHAVEVISFCLTIAFAVECLLKITALGWRKWGRDGYNLFDALVVLLGIVELLLSPPDFFPGEQQDSKGTASLSGLRSFRLFALFRLARSWPSLQQLLATMLSTLREVGNFSVLFLLFMYIYALIGMQTFANQFQFDVHGNRASRPENIY---YIPRSNFDTLLWSLVTVFQILTG 724
BLAST of mRNA_H-elongata_contig5653.13101.1 vs. uniprot
Match: F0WCG7_9STRA (Similar to sodium channel putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WCG7_9STRA) HSP 1 Score: 384 bits (985), Expect = 7.660e-112 Identity = 276/778 (35.48%), Postives = 394/778 (50.64%), Query Frame = 1
Query: 64 HSKEAVFKAFGKTFKYAKTSLWVFDELNPVRVACVKIIAHPWFDRFILFLILLNSIVLALTDWSVIDEDPDSENVWRPVAEG------SWRNTLLWKSEPVFTIFFTVECMLKIIAQGFYLGRGSYLKDTWNILDFTVVVTCLMTNIPGVPRMTAXXXXXXXXXXXXXXXXXXXQKLVVSMLRSVPQLISVVILLQFIFTVFGIFGIQIFSGKQHARCRLTPYPV------NNTFQ--IGMNYKA--------YRCLDVSNFDLLDEEPA----WTQSSSPWATPRECWWPLDTEDERLCTVDTGYGKHKCDHDPRYMNESEFRWCGSNYDAMGNPRFTGGVIEGVEWDANSLTANATFVESLNWGYTTFDNIFVAFLSIFQSITTEGWSDILYQVKDCSLPILGDVVFIILILWGSFFTLNLLLAVLEGNVTKCKAEDKVNECVLANGIAGECSHANHACDEDSASRMTYKRSAARWQFYRDYWGREEWTIFPRSWLMPLSDLGNSSAMESPQKNGLTLSSYCGHVDETSRKTRPHDDSRYPCREGGGGIIRNDEMYFPAWRLLLRRVVHHENFQNFMTLLIALNTVVLAMDHHPMDKDFAGYLEVFNFAFSLCFVLEMVLKLVALGPREYANDSFNLFDGFIVIIGLLELGISKPAFLEGSTGRTSGGALSPLRSFRLFRVFKLAREWESMRELLNTLGKTLRDIGNFGLLLMLFMYIYALVGLETFANRFHFGEDGRAV---HIGEEGYDSAWVPRSNFDTLGNAFTTIFEASSG 2310
H + F K+ +A TSL+ F + N VR C+ I D ++ I+ NS +L +TD SV+D + + G S N ++ SE FT FTVEC LKIIA GF +G+YL+D WN+LDF VV+ L+ + XXXXXXXXXXXXX ++L+ ++L+++P L +VVIL F+F +FGI GIQ+F G +RCRLTPYP+ + T+Q I Y A Y+CL N LL E +T+ +SPW P++C+WP+++ DE LCT + G HKC S+ CGS+YDA GNPRF + A F + ++GYTTFDNI AF +IFQ+IT EGW+ I+Y D S PI+ + F+IL+++ SFF +NL LAV+ D+ N +D ++ S +R SS ++S + S +D ++ R + + Y+ R + +V H+ F + L+I NT V+A+DH+PM + LEV NF S FV+EM+LK+ LG YA D FNLFD FIV++ +LEL +S P+FL S R S G +S LR+FR S RELL + + + I NF +LL LF+YIYAL+G++ +AN F D AV H + + +A +PRSNFD+L AF T+F+ +G
Sbjct: 68 HLRTLFFAQSHKSQSFAGTSLFFFSKQNFVRRWCINIATSRILDIVVVSAIIANSAILGITDHSVVDHHMNPSVIGYKYDNGAMVEAYSQSNWIVQSSELPFTALFTVECALKIIAMGFIRSKGAYLRDAWNVLDFVVVLMSLIGILXXXXXXXXXXXXXXXXXXXXXSMIPGMRRLISALLKALPALANVVILQLFVFLIFGILGIQLFGGLMTSRCRLTPYPIKMPVDKDGTYQWPIPSEYLAKVISDPVTYQCL---NEPLLSHEDRSSRLYTKETSPWRFPQDCFWPINSTDETLCTFTSESGVHKC---------SQVNVCGSDYDAFGNPRFKN----------EKVMQKAVFSIAFDYGYTTFDNIGKAFFTIFQAITQEGWTVIMYMTMDTSQPIVASLFFVILMIFASFFLMNLTLAVIS---------DEFNL-------------------DDQKRQLVSTSSKSR----------------------------RSSRLDSSPSLLMLSSQSTSRIDPSTSSQRTQSK-----------MSTRNSFYYRV-RKCVHVLVSHQAFSGVIMLVIMANTTVMALDHYPMPPTLSSNLEVINFGLSCVFVVEMLLKVFGLGFCVYARDRFNLFDAFIVVMSMLELILSPPSFL--SKNRPSRGNVSALRTFRXXXXXXXXXXXXSFRELLALIIRAVAGIANFAVLLFLFIYIYALLGIQFYANTMRFDADAYAVSAAHGTDLAFWNAQLPRSNFDSLLWAFVTVFQVITG 753 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5653.13101.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig5653.13101.1 >prot_H-elongata_contig5653.13101.1 ID=prot_H-elongata_contig5653.13101.1|Name=mRNA_H-elongata_contig5653.13101.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=773bp MIYPTHHHGEFKKDNEAAGYDHSKEAVFKAFGKTFKYAKTSLWVFDELNPback to top mRNA from alignment at H-elongata_contig5653:1097..7252+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig5653.13101.1 ID=mRNA_H-elongata_contig5653.13101.1|Name=mRNA_H-elongata_contig5653.13101.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=6156bp|location=Sequence derived from alignment at H-elongata_contig5653:1097..7252+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig5653:1097..7252+ >mRNA_H-elongata_contig5653.13101.1 ID=mRNA_H-elongata_contig5653.13101.1|Name=mRNA_H-elongata_contig5653.13101.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=4638bp|location=Sequence derived from alignment at H-elongata_contig5653:1097..7252+ (Himanthalia elongata Himel1 dioecious)back to top |