mRNA_H-elongata_contig565.13099.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig565.13099.1
Unique NamemRNA_H-elongata_contig565.13099.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
[Close]
BLAST of mRNA_H-elongata_contig565.13099.1 vs. uniprot
Match: A0A6H5KPS9_9PHAE (Non-specific serine/threonine protein kinase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPS9_9PHAE)

HSP 1 Score: 574 bits (1479), Expect = 7.970e-182
Identity = 444/1023 (43.40%), Postives = 528/1023 (51.61%), Query Frame = 1 
Query:    1 LISIQVIPSKQRPRKISMQGEDGRDYMFLLKGHEDLRQDERVMQLFGQVNALFGKDRRNYSHDLFIQRYAVSPLSHNAGVVGWVPNTDTLHQLIRQYREKRKILLNIEHRLMSQKAGPCDYETLNIMQKVEVFEMSLKYTAGQDLYKILWLKSKNSEAWLERRTCYTRSLAVMSMVGYILGLGDRHPSNLMLDRFTGKILHIDFGDCFEVAMNRGKFPERIPFRLTRMLVNAMEVSRLLPVSGVEGNFRNTCELVMSVLRESRDSLVAMLEAFVHDPLISWRLLGTETLEDEA----SHHSGTGXXXXXXXXXXXXXXXXXXPPSNMERIALPPRVSSPRAGQPPGRSFGADTNAPPLAAQAPLASPHLNPVNGGERAKGLRD-------ASRNPPQH-----TGVVTATIEFLAAADTAAAAAEAEPYYTRHGYRVVAGVGTTCV-----------------------KXXXXXXXXXXXXXXXXXSSVKECVGRVGPSG--------SNVLPPSTAMMSHSHRGATSVPRPLTLAGMTPLQPVPE----FGQGGRESDP---------DSDATEETPQEKRNSRVGVLGA----------RPVSSRVNGGS--------------------------------DAPNGATPDE--------------GGGFHAANIGGG-----GNVEGSDSRRVA--ITTTEGDTAPAAIAADTSNLT--RTEREHVLSAAISSNYVRQGSVRVYP--------AARGGAMDEAPSVTDGRMDGRRRIRLGDEDGSVRPGTSAAVDVRRPRSASISVHGSRPRRAPGTGGGAGNEGGNVSGDRNRDRDDVDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQQSSSFKPDLYLQIQALSNRTNTSLHDTFASRTPQPDDD-----PSELASLT----ASRFSRSTRERDLRAQHGIEGGSAPQEALNQKAVKVIRRVEDKLAGLDFHNDE--PYDVDKQVDYLIQQATGNDRLCQCFIGWCPFW 2637
            L  +QVIPSKQRPRKI+MQGEDGRDY+FLLKGHEDLRQDERVMQLFGQVNAL  KDRRNYSHDL IQRYAVSPLSHNAGVVGWVPNTDTLHQLIR YR+ RKI+LNIEHRLM+Q   PC+Y+ L +MQKVEVFEMSL++TAGQDLYK+LWLKS +SEAWLERRTCYTRSLAVMSMVGYILGLGDRHPSNLMLDRFTGKILHIDFGDCFEVAMNRGKFPE+IPFRLTRMLVNAMEVS      G+EGNFR TCELVM VLRESR+SLVAMLEAFVHDPLISWRLL  E  +D A    S H  T                                         P +++                +P + P+N G  AK  ++       AS NPP H      G  +A++                                                          +                  +V +  GRVG SG           LP S   +SH    ++   RPLTL      QPV E    +G+GG ESD          D+D T  +PQ    SR G  G           + V  +  GG                                   P G  P+E                   AA +GGG     G +E    R+    I    G    +    D +NL    T  E  +  A +++    G+  V P           GG  D A  +   R       + G+        T A  + R   S+S+++ G  P        G G+       D+  + D+        XXXX     XXXXXXXXXXX         L+QSSSF+P +++++QALS R +     + A  T  P        P E+AS+     ASRFSRSTRERDL+ + G EG SAPQEALN+KAVKVIRRV+ KL+GL+F + +  PY V  QVD LI+QAT N+RLCQCFIGWCPFW
Sbjct:  539 LPDVQVIPSKQRPRKITMQGEDGRDYVFLLKGHEDLRQDERVMQLFGQVNALLAKDRRNYSHDLSIQRYAVSPLSHNAGVVGWVPNTDTLHQLIRNYRDSRKIVLNIEHRLMTQATIPCEYDPLTLMQKVEVFEMSLQHTAGQDLYKVLWLKSPHSEAWLERRTCYTRSLAVMSMVGYILGLGDRHPSNLMLDRFTGKILHIDFGDCFEVAMNRGKFPEKIPFRLTRMLVNAMEVS------GIEGNFRTTCELVMEVLRESRESLVAMLEAFVHDPLISWRLL--EGKQDGADATGSSHRSTSTAGGAPSEAPAPTDPVSAAVPXXXXXXXXXXXXXXXLNALPQQAYXXXXXXXXXXXXXXXXTPRIGPMNPGAAAKWQQETAGPDGAASSNPPPHPSGNAVGNPSASVRVPLTPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSHTAASGRVYQDHCGQGYHEQQHAPPAVNQYAGRVGVSGLMPPXXXXXXXLPLSARAVSHRVGPSSLSGRPLTL------QPVHELRARYGRGGAESDTEVGSDLGTEDNDETPRSPQSPTGSRAGDSGGGGRSTESGRDQAVGKQDPGGEWPGQRQAGYAMAGXXXXXXXXSESVAEGGAREGLPPGGRPEELRSVPPTLSGPVVVAPAIGAAGVGGGRRVFSGIIEPPSPRKTGDGIDHDHGFGTSSPHQQDDTNLPVLDTSNEGGVDEAAAASGGAWGTAGVPPDHGPPVGREEEGGGKDVAGPLGGLRSPPADGTKRGEAVDGGNGNTKALPEGR--SSSSVAIQGDGPAA------GTGDAPDGTEEDQPAEMDEX-------XXXXMVAEAXXXXXXXXXXXRPPHRPGSLLEQSSSFRPHMHVRMQALSARRHGLSLSSRAGLTVGPAGGGVGGLPVEMASIARSIAASRFSRSTRERDLQQELGPEGTSAPQEALNEKAVKVIRRVQAKLSGLEFGDGDEPPYAVKAQVDLLIKQATSNERLCQCFIGWCPFW 1532
[Close]
BLAST of mRNA_H-elongata_contig565.13099.1 vs. uniprot
Match: D7G264_ECTSI (Non-specific serine/threonine protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G264_ECTSI)

HSP 1 Score: 520 bits (1338), Expect = 9.430e-157
Identity = 441/1140 (38.68%), Postives = 535/1140 (46.93%), Query Frame = 1 
Query:    1 LISIQVIPSKQRPRKISMQGEDGRDYMFLLKGHEDLRQDERVMQLFGQVNALFGKDRRNYSHDLFIQRYAVSPLSHNAGVVGWVPNTDTLHQLIRQYREKRKILLNIEHRLMSQKAGPCDYETLNIMQKVEVFEMSLKYTAGQDLYKILWLKSKNSEAWLERRTCYTRSLAVMSMVGYILGLGDRHPSNLMLDRFTGKILHIDFGDCFEVAMNRGKFPERIPFRLTRMLVNAME------VSRLLPV-----------SGVEGNFRNTCELVMSVLRESRDSLVAMLEAFVHDPLISWRLLGTETLEDEASHHSGTGXXXXXXXXXXXXXXXXXXPPSNMERIALPPRVSSPRAGQPPGRSFGADTNA--PPLAA---QAPLASPHLNPVNGGERAKGLRDASRNPPQ-----------------------------------------------------HTGVVTATIEFLAAADTAAAAAEAEPYYTRHGYRVVAGVGTTCV---------------------------------------------------------------------KXXXXXXXXXXXXXXXXXSSVKECVGRVGPSGSNVLPP-----------STAMMSHSHRGATSVPRPLTLAGMTPLQPVPE----FGQGGRESDPD------SDATEETPQE--------------------------------------------KRNSRVGVLGARPV-----SSRVNGGS---DAPNGATPDE--------------GGGFHAANIGGG-----GNVEGSDSRRVAITTTEGDTAPAAIAADTSNLTRTEREHVLSAAISSNYVRQGSVRVYPAARGGA-------MDEAPSVTDGRMDGRRRI-------RLGDEDGSVRPGTSAAVDVRRPRSASISVHGSRPRRAPGTGGGAGNEGGNVSGDRNRDRDDVDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQQSSSFKPDLYLQIQALSNRTNTSLHDTFASRTPQP-----DDDPSELASLT----ASRFSRSTRERDLRAQHGIEGGSAPQEALNQKAVKVIRRVEDKLAGLDFHNDE--PYDVDKQVDYLIQQATGNDRLCQCFIGWCPFW 2637
            L  +QVIPSKQRPRKI+MQGEDGRDY+FLLKGHEDLRQDERVMQLFGQVNAL  KDRRNYSHDL IQRYAVSPLSHNAGVVGWVPNTDTLHQLIR YR+ RKI+LNIEHRLM+Q   PC+Y+TL +MQKVEVFEMSL++TAGQDLYK+LWLKS++SEAWLERRTCYTRSLAVMSMVGYILGLGDRHPSNLMLDRFTGKILHIDFGDCFEVAMNRGKFPE+IPFRLTRMLVNAME      V +LLP            SG++GNF NTCELVM  L ESR++L  +LE FV +PLISWRLL  +    +    +   XXXXXXXXX     XXXX                      P  +      A  PP A    Q P  +P + P+N G+R  G     +  P                                                      H G +   ++  A  D    AA  +P     G  V     +  V                                                                     +                  +VK+   RVG  G  ++P            S   +S+    ++   RPLTL      QPV E    +G+GG +SD +      ++  +ETP+                                             +R +   + G         S  V+ G      P G  P+E                G  AA +GGG     G +E    R     +  G         DTS+  R + +  L    +SN   +G +    AA GGA       MD  P V     DG   +       R    DG+ R G   AVD     + ++    S        GGG           R+ DR                                         QSSSF+P +++++QALS   + S   + A  T  P     DD P+E+AS+     ASRFSRSTRERDL+ + G EG SAPQEALN+KAVKVIRRV+DKL+GL+F + +  PY V  QVD LI+QAT N+RLCQCFIGWCPFW
Sbjct: 2262 LPDVQVIPSKQRPRKITMQGEDGRDYVFLLKGHEDLRQDERVMQLFGQVNALLAKDRRNYSHDLSIQRYAVSPLSHNAGVVGWVPNTDTLHQLIRDYRDSRKIVLNIEHRLMTQATIPCEYDTLTLMQKVEVFEMSLQHTAGQDLYKVLWLKSRHSEAWLERRTCYTRSLAVMSMVGYILGLGDRHPSNLMLDRFTGKILHIDFGDCFEVAMNRGKFPEKIPFRLTRMLVNAMERGYYVVVRKLLPPTLDGLPPPPPGSGIQGNFPNTCELVMEGLPESRENLGTLLETFVDEPLISWRLLERKQEGAQPPGSNXXXXXXXXXXXXETPAPXXXXXXXXXXXXXXXXXXXXXXXXXXPLNAMPQQAYAMPPPQATAVPQQPPPTPRIGPMNPGQRGPGRAQHPQQQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHVGRLGRLLQETAGPD---GAASGDPPPHPGGNAVGDPSASVRVALAPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHTAASGRVSQDSYGQRYHEQQHPPQAVKQYASRVGVGG--LMPXXXXXXXXXXXXSARAVSYRVGPSSLSGRPLTL------QPVHELRSRYGRGGADSDTEVGSDVGTEENDETPRXXXXXXXXXXXXXXXXXXXXXXXXATDSGRDEAVRKEDPGGEWAGQRQAGYAMTGXXXXXXXXXSESVDEGGAREGLPPGGRPEELRSVPPTPSGPVVVAPGIGAAGVGGGRRVFSGIIEPPSPRNAVDGSDHG--------FDTSS-PRQQDDANLPVLGTSN---EGGIDEAAAASGGAWGTGGVPMDHGPPVGRDEEDGGEDVAGPLGGLRSPSADGTKRDG---AVDGSNGNTKALPERQSAKAAVAAVGGG-----------RDADR---------------------------------PRSSSVAIQSSSFRPHMHVRMQALSALRHESYLSSRAGLTVGPAGGGVDDLPAEMASIARSIAASRFSRSTRERDLQQELGPEGTSAPQEALNEKAVKVIRRVQDKLSGLEFGDGDEPPYPVKAQVDLLIKQATSNERLCQCFIGWCPFW 3331
[Close]
BLAST of mRNA_H-elongata_contig565.13099.1 vs. uniprot
Match: A0A7S3XMQ5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XMQ5_HETAK)

HSP 1 Score: 424 bits (1090), Expect = 4.940e-138
Identity = 218/299 (72.91%), Postives = 245/299 (81.94%), Query Frame = 1 
Query:    7 SIQVIPSKQRPRKISMQGEDGRDYMFLLKGHEDLRQDERVMQLFGQVNALFGKDRRNYSHDLFIQRYAVSPLSHNAGVVGWVPNTDTLHQLIRQYREKRKILLNIEHRLMSQKAGPCDYETLNIMQKVEVFEMSLKYTAGQDLYKILWLKSKNSEAWLERRTCYTRSLAVMSMVGYILGLGDRHPSNLMLDRFTGKILHIDFGDCFEVAMNRGKFPERIPFRLTRMLVNAMEVSRLLPVSGVEGNFRNTCELVMSVLRESRDSLVAMLEAFVHDPLISWRL-LGTETLEDEASHHSGTG 900
            ++QVIPSKQRPRKI++QGEDGR Y+FLLKGHEDLRQDERVMQL GQVNAL  KDRR    DL  QRY V PLS NAGVVGWVP+ +TLH LIR YRE RKILLNIEHRLM Q A   DY+ L ++QKVEVFE +L++TAG DLYK+LWLKS+NSEAWL+RRT YTRSLAVMS+VGYILGLGDRHPSNLMLDR +GKILHIDFGDCFEVAM+R KFPE++PFRLTRML NAM VS      GVEGNFR T E VM+VLRE+ +SLV MLEAFVHDPLI+WRL   T   E E + +   G
Sbjct:   74 AVQVIPSKQRPRKIALQGEDGRAYVFLLKGHEDLRQDERVMQLKGQVNALLAKDRRTQKRDLAAQRYTVLPLSCNAGVVGWVPHCETLHTLIRDYRESRKILLNIEHRLMMQMAP--DYDALTLLQKVEVFEAALEHTAGMDLYKVLWLKSRNSEAWLDRRTNYTRSLAVMSVVGYILGLGDRHPSNLMLDRRSGKILHIDFGDCFEVAMHRDKFPEKVPFRLTRMLANAMGVS------GVEGNFRATAEAVMTVLRENSESLVTMLEAFVHDPLITWRLHAATAAREGEQAANGKAG 364
[Close]
BLAST of mRNA_H-elongata_contig565.13099.1 vs. uniprot
Match: U9U1R8_RHIID (Non-specific serine/threonine protein kinase (Fragment) n=1 Tax=Rhizophagus irregularis (strain DAOM 181602 / DAOM 197198 / MUCL 43194) TaxID=747089 RepID=U9U1R8_RHIID)

HSP 1 Score: 410 bits (1054), Expect = 1.110e-132
Identity = 200/282 (70.92%), Postives = 235/282 (83.33%), Query Frame = 1 
Query:    7 SIQVIPSKQRPRKISMQGEDGRDYMFLLKGHEDLRQDERVMQLFGQVNALFGKDRRNYSHDLFIQRYAVSPLSHNAGVVGWVPNTDTLHQLIRQYREKRKILLNIEHRLMSQKAGPCDYETLNIMQKVEVFEMSLKYTAGQDLYKILWLKSKNSEAWLERRTCYTRSLAVMSMVGYILGLGDRHPSNLMLDRFTGKILHIDFGDCFEVAMNRGKFPERIPFRLTRMLVNAMEVSRLLPVSGVEGNFRNTCELVMSVLRESRDSLVAMLEAFVHDPLISWRLL 852
            ++ +I SKQRPRK+++ G DG++Y FLLKGHEDLRQDERVMQLFG VN L   D   +   L IQRY V+PL+ N G++GWVPN DTLH LIR YRE +KILLNIEHRLM Q A   DY+   I++KVEVFE +L  T GQDLYK+LWLKSKNSEAWLERRT YTRSLA+MSMVGYILGLGDRHPSN+MLDR+TGKI+HIDFGDCFEVAM R K+PE+IPFRLTRMLVNAMEVS      G+EGNFR TCE VMSVLR++++SL+A+LEAFVHDPLI+WR++
Sbjct:   18 TVNIISSKQRPRKLNLIGNDGKEYQFLLKGHEDLRQDERVMQLFGLVNTLLSVDSETFKRHLHIQRYTVTPLTPNIGLLGWVPNCDTLHALIRDYRESKKILLNIEHRLMLQMAP--DYDQCTIIEKVEVFEFALANTTGQDLYKVLWLKSKNSEAWLERRTNYTRSLALMSMVGYILGLGDRHPSNIMLDRYTGKIVHIDFGDCFEVAMTREKYPEKIPFRLTRMLVNAMEVS------GIEGNFRTTCEAVMSVLRKNKESLMAVLEAFVHDPLINWRIM 291
[Close]
BLAST of mRNA_H-elongata_contig565.13099.1 vs. uniprot
Match: W7TTX4_9STRA (Serine/threonine-protein kinase TOR n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TTX4_9STRA)

HSP 1 Score: 443 bits (1140), Expect = 1.410e-130
Identity = 217/283 (76.68%), Postives = 247/283 (87.28%), Query Frame = 1 
Query:    7 SIQVIPSKQRPRKISMQGEDGRDYMFLLKGHEDLRQDERVMQLFGQVNALFGKDRRNYSHDLFIQRYAVSPLSHNAGVVGWVPNTDTLHQLIRQYREKRKILLNIEHRLMSQKAGPCDYETLNIMQKVEVFEMSLKYTAGQDLYKILWLKSKNSEAWLERRTCYTRSLAVMSMVGYILGLGDRHPSNLMLDRFTGKILHIDFGDCFEVAMNRGKFPERIPFRLTRMLVNAMEVSRLLPVSGVEGNFRNTCELVMSVLRESRDSLVAMLEAFVHDPLISWRLLG 855
            ++QVI SKQRPRK+++QGEDG+DY+FLLKGHEDLRQDERVMQLFG VNAL  +DRR   HDL IQRYAV+PLSHN G+VGWVP+ DTLH LIR YRE RK++L IEHRLM Q +   DYE L +M KVEVFE +L+ TAGQDLYK+LWLKS+NSE WL+RRT YTRSLAVMSMVGYILGLGDRHPSNLMLDR+TGKILHIDFGDCFEVAM+R K+PE+IPFRLTRML NAME+S      G+EGNFR TCE VM+VLR++RDSL+AMLEAFVHDPLISWRLLG
Sbjct: 2236 AVQVISSKQRPRKVTIQGEDGQDYLFLLKGHEDLRQDERVMQLFGLVNALLARDRRTNKHDLSIQRYAVTPLSHNVGIVGWVPHCDTLHALIRDYREARKVMLGIEHRLMLQMSP--DYEALPLMHKVEVFEAALENTAGQDLYKVLWLKSENSEIWLDRRTSYTRSLAVMSMVGYILGLGDRHPSNLMLDRYTGKILHIDFGDCFEVAMHREKYPEKIPFRLTRMLTNAMEIS------GIEGNFRCTCERVMTVLRDNRDSLIAMLEAFVHDPLISWRLLG 2510
[Close]
BLAST of mRNA_H-elongata_contig565.13099.1 vs. uniprot
Match: A0A4P9XNT6_9FUNG (Non-specific serine/threonine protein kinase (Fragment) n=1 Tax=Thamnocephalis sphaerospora TaxID=78915 RepID=A0A4P9XNT6_9FUNG)

HSP 1 Score: 413 bits (1062), Expect = 3.830e-130
Identity = 203/282 (71.99%), Postives = 240/282 (85.11%), Query Frame = 1 
Query:    7 SIQVIPSKQRPRKISMQGEDGRDYMFLLKGHEDLRQDERVMQLFGQVNALFGKDRRNYSHDLFIQRYAVSPLSHNAGVVGWVPNTDTLHQLIRQYREKRKILLNIEHRLMSQKAGPCDYETLNIMQKVEVFEMSLKYTAGQDLYKILWLKSKNSEAWLERRTCYTRSLAVMSMVGYILGLGDRHPSNLMLDRFTGKILHIDFGDCFEVAMNRGKFPERIPFRLTRMLVNAMEVSRLLPVSGVEGNFRNTCELVMSVLRESRDSLVAMLEAFVHDPLISWRLL 852
            ++ VI SKQRPRK+S++G DG+DY +LLKGHEDLRQDERVMQLFG VN L   D   +   L I+RYAV PLS N+G++GWVP+TDTLH LIR YRE +KILLNIEHRLM Q A   DY+ L ++QKVEVFE +L+ T GQDLY++LWLKS+NSE+WLERRT YTRSLAVMSMVGYILGLGDRHPSNLML+R+TGK++HIDFGDCFEVAM+R KFPERIPFRLTRMLVNAMEVS      G+EGNFR TCE VM VLRE+++SL+A+LEAFV+DPLI+WRL+
Sbjct:  273 TLTVITSKQRPRKLSLKGSDGKDYQYLLKGHEDLRQDERVMQLFGLVNTLLQVDPETFKRHLSIRRYAVIPLSPNSGLIGWVPHTDTLHTLIRDYRESKKILLNIEHRLMLQMAP--DYDNLTLLQKVEVFEYALENTTGQDLYRVLWLKSRNSESWLERRTNYTRSLAVMSMVGYILGLGDRHPSNLMLERYTGKVVHIDFGDCFEVAMHREKFPERIPFRLTRMLVNAMEVS------GIEGNFRTTCENVMRVLRENKESLMAVLEAFVYDPLINWRLM 546
[Close]
BLAST of mRNA_H-elongata_contig565.13099.1 vs. uniprot
Match: A0A7R9UGR2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UGR2_9STRA)

HSP 1 Score: 415 bits (1067), Expect = 8.950e-130
Identity = 209/298 (70.13%), Postives = 240/298 (80.54%), Query Frame = 1 
Query:    7 SIQVIPSKQRPRKISMQGEDGRDYMFLLKGHEDLRQDERVMQLFGQVNALFGKDRRNYSHDLFIQRYAVSPLSHNAGVVGWVPNTDTLHQLIRQYREKRKILLNIEHRLMSQKAGPCDYETLNIMQKVEVFEMSLKYTAGQDLYKILWLKSKNSEAWLERRTCYTRSLAVMSMVGYILGLGDRHPSNLMLDRFTGKILHIDFGDCFEVAMNRGKFPERIPFRLTRMLVNAMEVSRLLPVSGVEGNFRNTCELVMSVLRESRDSLVAMLEAFVHDPLISWRLLGTETLEDEASHHSGTG 900
            +I+V+ SKQRPRKI M G DG +YMFLLK HEDLRQDER MQLFG VNAL  +DR+   HDL I RYAV PLSH AGVVGWV N DTLH LI++YRE R+IL+N+EHRLM+Q A   DY+ L  +QK EVF  +L+ T GQDLYKILWLKS NSE WLERRT ++RSLAVMSMVGYILGLGDRHPSNLML+R  GKILH+DFGDCFEV+MNR ++PERIPFRLTRMLV AME S      G+EGNFR+TCE VM VLR++RDSL+AMLEAFV+DPLISWRLLGT+   +EA      G
Sbjct:  408 NIEVVLSKQRPRKIVMIGNDGLEYMFLLKAHEDLRQDERCMQLFGLVNALLDRDRKTNKHDLAISRYAVMPLSHQAGVVGWVQNCDTLHALIKEYRETRRILINVEHRLMTQMAP--DYDKLTQLQKCEVFNAALENTTGQDLYKILWLKSTNSEKWLERRTNFSRSLAVMSMVGYILGLGDRHPSNLMLERSNGKILHVDFGDCFEVSMNRERYPERIPFRLTRMLVKAMEAS------GIEGNFRSTCERVMDVLRDNRDSLIAMLEAFVYDPLISWRLLGTQHNAEEAEEGEQQG 697
[Close]
BLAST of mRNA_H-elongata_contig565.13099.1 vs. uniprot
Match: A0A7S1BDY4_9STRA (Non-specific serine/threonine protein kinase n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BDY4_9STRA)

HSP 1 Score: 426 bits (1095), Expect = 1.760e-129
Identity = 213/300 (71.00%), Postives = 254/300 (84.67%), Query Frame = 1 
Query:    7 SIQVIPSKQRPRKISMQGEDGRDYMFLLKGHEDLRQDERVMQLFGQVNALFGKDRRNYSHDLFIQRYAVSPLSHNAGVVGWVPNTDTLHQLIRQYREKRKILLNIEHRLMSQKAGPCDYETLNIMQKVEVFEMSLKYTAGQDLYKILWLKSKNSEAWLERRTCYTRSLAVMSMVGYILGLGDRHPSNLMLDRFTGKILHIDFGDCFEVAMNRGKFPERIPFRLTRMLVNAMEVSRLLPVSGVEGNFRNTCELVMSVLRESRDSLVAMLEAFVHDPLISWRLLGTE---TLEDEASHHSGT 897
            S+QVI SKQRPRKI +QG DG +Y+FLLKGHEDLRQDERVMQLFG VNAL  KDRR  +HDL IQRYA++PLSHNAGVVGWVP+ DTLH LI++YRE +KI+LN+E+RLM++ A   DY+ L ++QKVEVFE +L  T+G+DLY++LWLKSK+SE WLERRT YTRSLAVMSMVGYILGLGDRHPSNLMLDR +G +LHIDFGDCFEVAM+R KFPE++PFRLTRML+ AMEVS      G+EG++R+TCE  M VLRE+RDSLVAMLEAFV+DPLISWRLLG +   T  ++A+  S T
Sbjct:  601 SVQVITSKQRPRKIIIQGNDGNNYVFLLKGHEDLRQDERVMQLFGLVNALLAKDRRTNNHDLKIQRYAIAPLSHNAGVVGWVPHCDTLHILIKEYREAKKIMLNMENRLMTKMAP--DYDLLTVLQKVEVFEAALAKTSGKDLYEVLWLKSKDSEEWLERRTRYTRSLAVMSMVGYILGLGDRHPSNLMLDRMSGSLLHIDFGDCFEVAMHREKFPEKVPFRLTRMLIKAMEVS------GIEGSYRSTCEQTMGVLRENRDSLVAMLEAFVYDPLISWRLLGEDAAATAPEKAAQPSTT 892
[Close]
BLAST of mRNA_H-elongata_contig565.13099.1 vs. uniprot
Match: A0A7S1UG31_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UG31_9STRA)

HSP 1 Score: 409 bits (1051), Expect = 4.050e-129
Identity = 205/295 (69.49%), Postives = 243/295 (82.37%), Query Frame = 1 
Query:   10 IQVIPSKQRPRKISMQGEDGRDYMFLLKGHEDLRQDERVMQLFGQVNALFGKDRRNYSHDLFIQRYAVSPLSHNAGVVGWVPNTDTLHQLIRQYREKRKILLNIEHRLMSQKAGPCDYETLNIMQKVEVFEMSLKYTAGQDLYKILWLKSKNSEAWLERRTCYTRSLAVMSMVGYILGLGDRHPSNLMLDRFTGKILHIDFGDCFEVAMNRGKFPERIPFRLTRMLVNAMEVSRLLPVSGVEGNFRNTCELVMSVLRESRDSLVAMLEAFVHDPLISWRLLG-TETLEDEASHHS 891
            ++V+ SKQRPRKI M G +GR+YMFLLK HEDLRQDER MQLFG VNAL  +DR+   HDL I RYAV PLSH AGVVGWV N DTLH LI++YRE R+IL+N+E+RLM+Q A   DY+ L  +QK EVF  +L+ T GQDLYK+LWLKS NSE WL+RRT ++RSLAVMSMVGYILGLGDRHPSNLMLD+  GKILH+DFGDCFEV+M+R ++PE+IPFRLTRMLVNAME S      G+EGNFR+TCE VM+VLR++RDSL+AMLEAFV+DPLISWRLLG T+  ED+ S  S
Sbjct:   93 VEVVVSKQRPRKIVMLGNNGREYMFLLKAHEDLRQDERCMQLFGLVNALLDRDRKTNKHDLAISRYAVMPLSHQAGVVGWVQNCDTLHALIKEYRETRRILINVEYRLMTQMAP--DYDKLTQLQKCEVFTTTLENTTGQDLYKVLWLKSTNSEKWLDRRTNFSRSLAVMSMVGYILGLGDRHPSNLMLDKNNGKILHVDFGDCFEVSMHRERYPEKIPFRLTRMLVNAMEAS------GIEGNFRSTCERVMNVLRDNRDSLIAMLEAFVYDPLISWRLLGATKGDEDDVSEAS 379
[Close]
BLAST of mRNA_H-elongata_contig565.13099.1 vs. uniprot
Match: A0A7S2LRZ4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LRZ4_9STRA)

HSP 1 Score: 405 bits (1041), Expect = 1.220e-127
Identity = 200/293 (68.26%), Postives = 244/293 (83.28%), Query Frame = 1 
Query:   10 IQVIPSKQRPRKISMQGEDGRDYMFLLKGHEDLRQDERVMQLFGQVNALFGKDRRNYSHDLFIQRYAVSPLSHNAGVVGWVPNTDTLHQLIRQYREKRKILLNIEHRLMSQKAGPCDYETLNIMQKVEVFEMSLKYTAGQ--DLYKILWLKSKNSEAWLERRTCYTRSLAVMSMVGYILGLGDRHPSNLMLDRFTGKILHIDFGDCFEVAMNRGKFPERIPFRLTRMLVNAMEVSRLLPVSGVEGNFRNTCELVMSVLRESRDSLVAMLEAFVHDPLISWRLLGTETLEDEAS 882
            +QVI SKQRPRKI ++G DG+DY+FLLKGHEDLRQDERVMQLFG VNAL  +DRR  SHDL IQRY ++PLSH+ G+VGWVP+T+T+H  IR YRE +KI+LN+E+R M + A   DY+ L ++QKVEVFE +L+   G+  DLY++LW+KS +SE WLERRT YTRSLAVMSMVGYILGLGDRHPSNLMLD+ +G++LHIDFGDCFEVAM+R KFPE++PFRLTRMLVNAMEVS      G+EG++R+TCE  M VLR++RDSLVAMLEAFVHDPLISWRLL     ++ A+
Sbjct:  289 VQVITSKQRPRKIVLRGSDGKDYVFLLKGHEDLRQDERVMQLFGLVNALLARDRRTKSHDLNIQRYVITPLSHHVGLVGWVPHTETIHSHIRDYRESKKIVLNMENREMMKMAP--DYDFLTVLQKVEVFETALQRATGKGMDLYEVLWMKSIDSEEWLERRTKYTRSLAVMSMVGYILGLGDRHPSNLMLDQISGRVLHIDFGDCFEVAMHREKFPEKVPFRLTRMLVNAMEVS------GIEGSYRSTCERTMGVLRDNRDSLVAMLEAFVHDPLISWRLLEQGKTDENAT 573
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig565.13099.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KPS9_9PHAE7.970e-18243.40Non-specific serine/threonine protein kinase n=1 T... [more]
D7G264_ECTSI9.430e-15738.68Non-specific serine/threonine protein kinase n=1 T... [more]
A0A7S3XMQ5_HETAK4.940e-13872.91Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
U9U1R8_RHIID1.110e-13270.92Non-specific serine/threonine protein kinase (Frag... [more]
W7TTX4_9STRA1.410e-13076.68Serine/threonine-protein kinase TOR n=3 Tax=Monodo... [more]
A0A4P9XNT6_9FUNG3.830e-13071.99Non-specific serine/threonine protein kinase (Frag... [more]
A0A7R9UGR2_9STRA8.950e-13070.13Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A7S1BDY4_9STRA1.760e-12971.00Non-specific serine/threonine protein kinase n=1 T... [more]
A0A7S1UG31_9STRA4.050e-12969.49Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A7S2LRZ4_9STRA1.220e-12768.26Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig565contigH-elongata_contig565:876..6989 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score535.0
Seed ortholog evalue6.5e-149
Seed eggNOG ortholog2880.D7G264
Preferred nameMTOR
KEGG koko:K07203
KEGG Pathwayko01521,ko01522,ko04012,ko04066,ko04072,ko04136,ko04138,ko04139,ko04140,ko04150,ko04151,ko04152,ko04211,ko04212,ko04213,ko04218,ko04371,ko04630,ko04659,ko04714,ko04910,ko04919,ko04920,ko04930,ko04931,ko05165,ko05167,ko05200,ko05205,ko05206,ko05210,ko05212,ko05214,ko05215,ko05221,ko05224,ko05225,ko05226,ko05230,ko05231,map01521,map01522,map04012,map04066,map04072,map04136,map04138,map04139,map04140,map04150,map04151,map04152,map04211,map04212,map04213,map04218,map04371,map04630,map04659,map04714,map04910,map04919,map04920,map04930,map04931,map05165,map05167,map05200,map05205,map05206,map05210,map05212,map05214,map05215,map05221,map05224,map05225,map05226,map05230,map05231
GOsGO:0000003,GO:0000139,GO:0000182,GO:0000228,GO:0000322,GO:0000323,GO:0000324,GO:0000329,GO:0000491,GO:0000492,GO:0000768,GO:0000785,GO:0000790,GO:0000902,GO:0000904,GO:0000981,GO:0001016,GO:0001025,GO:0001030,GO:0001031,GO:0001032,GO:0001067,GO:0001101,GO:0001156,GO:0001300,GO:0001505,GO:0001558,GO:0001666,GO:0001763,GO:0001775,GO:0001932,GO:0001933,GO:0001934,GO:0001936,GO:0001938,GO:0002009,GO:0002119,GO:0002164,GO:0002165,GO:0002250,GO:0002252,GO:0002263,GO:0002285,GO:0002286,GO:0002287,GO:0002292,GO:0002293,GO:0002294,GO:0002295,GO:0002296,GO:0002360,GO:0002363,GO:0002366,GO:0002376,GO:0002460,GO:0002520,GO:0002521,GO:0002682,GO:0002683,GO:0002697,GO:0002698,GO:0002761,GO:0002831,GO:0002832,GO:0003006,GO:0003007,GO:0003008,GO:0003012,GO:0003013,GO:0003015,GO:0003170,GO:0003179,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0003824,GO:0004672,GO:0004674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005737,GO:0005739,GO:0005764,GO:0005768,GO:0005773,GO:0005774,GO:0005794,GO:0005829,GO:0005844,GO:0005886,GO:0005979,GO:0006091,GO:0006109,GO:0006112,GO:0006139,GO:0006206,GO:0006207,GO:0006259,GO:0006281,GO:0006351,GO:0006355,GO:0006356,GO:0006357,GO:0006359,GO:0006360,GO:0006412,GO:0006413,GO:0006417,GO:0006446,GO:0006464,GO:0006468,GO:0006518,GO:0006629,GO:0006644,GO:0006650,GO:0006661,GO:0006725,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006914,GO:0006915,GO:0006936,GO:0006941,GO:0006949,GO:0006950,GO:0006955,GO:0006970,GO:0006974,GO:0006979,GO:0006995,GO:0006996,GO:0007010,GO:0007015,GO:0007049,GO:0007050,GO:0007154,GO:0007163,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0007275,GO:0007276,GO:0007281,GO:0007282,GO:0007292,GO:0007293,GO:0007346,GO:0007399,GO:0007417,GO:0007420,GO:0007424,GO:0007430,GO:0007492,GO:0007498,GO:0007507,GO:0007520,GO:0007525,GO:0007548,GO:0007552,GO:0007565,GO:0007568,GO:0007569,GO:0007584,GO:0007610,GO:0007611,GO:0007612,GO:0007613,GO:0007616,GO:0007632,GO:0008015,GO:0008064,GO:0008104,GO:0008134,GO:0008150,GO:0008152,GO:0008219,GO:0008283,GO:0008284,GO:0008286,GO:0008306,GO:0008340,GO:0008356,GO:0008361,GO:0008406,GO:0008542,GO:0008582,GO:0008610,GO:0008654,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009112,GO:0009266,GO:0009267,GO:0009303,GO:0009314,GO:0009408,GO:0009410,GO:0009416,GO:0009605,GO:0009606,GO:0009607,GO:0009611,GO:0009615,GO:0009628,GO:0009629,GO:0009630,GO:0009635,GO:0009636,GO:0009653,GO:0009719,GO:0009725,GO:0009733,GO:0009743,GO:0009744,GO:0009745,GO:0009756,GO:0009790,GO:0009791,GO:0009793,GO:0009886,GO:0009887,GO:0009888,GO:0009889,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009895,GO:0009896,GO:0009898,GO:0009966,GO:0009967,GO:0009968,GO:0009987,GO:0009991,GO:0010008,GO:0010033,GO:0010035,GO:0010115,GO:0010116,GO:0010154,GO:0010182,GO:0010243,GO:0010259,GO:0010389,GO:0010467,GO:0010468,GO:0010506,GO:0010507,GO:0010514,GO:0010515,GO:0010556,GO:0010557,GO:0010562,GO:0010563,GO:0010564,GO:0010565,GO:0010591,GO:0010592,GO:0010604,GO:0010605,GO:0010608,GO:0010611,GO:0010613,GO:0010623,GO:0010628,GO:0010629,GO:0010632,GO:0010634,GO:0010638,GO:0010646,GO:0010647,GO:0010648,GO:0010675,GO:0010717,GO:0010718,GO:0010720,GO:0010769,GO:0010770,GO:0010830,GO:0010831,GO:0010906,GO:0010921,GO:0010922,GO:0010928,GO:0010929,GO:0010941,GO:0010942,GO:0010948,GO:0010962,GO:0010971,GO:0010972,GO:0010975,GO:0010976,GO:0012501,GO:0012505,GO:0014013,GO:0014015,GO:0014041,GO:0014042,GO:0014070,GO:0014072,GO:0014706,GO:0014733,GO:0014735,GO:0014736,GO:0014742,GO:0014743,GO:0014744,GO:0014745,GO:0014823,GO:0014902,GO:0015980,GO:0016020,GO:0016043,GO:0016070,GO:0016072,GO:0016192,GO:0016197,GO:0016202,GO:0016226,GO:0016241,GO:0016242,GO:0016301,GO:0016303,GO:0016310,GO:0016358,GO:0016740,GO:0016772,GO:0016773,GO:0017085,GO:0018105,GO:0018107,GO:0018130,GO:0018193,GO:0018209,GO:0018210,GO:0019216,GO:0019217,GO:0019219,GO:0019220,GO:0019221,GO:0019222,GO:0019438,GO:0019538,GO:0019637,GO:0019747,GO:0019856,GO:0019897,GO:0019898,GO:0019899,GO:0019900,GO:0019901,GO:0019904,GO:0019953,GO:0021510,GO:0022008,GO:0022402,GO:0022412,GO:0022414,GO:0022603,GO:0022604,GO:0022607,GO:0022613,GO:0022618,GO:0023051,GO:0023052,GO:0023056,GO:0023057,GO:0030029,GO:0030030,GO:0030036,GO:0030037,GO:0030097,GO:0030098,GO:0030100,GO:0030154,GO:0030162,GO:0030163,GO:0030182,GO:0030217,GO:0030258,GO:0030307,GO:0030334,GO:0030335,GO:0030425,GO:0030727,GO:0030832,GO:0030833,GO:0030838,GO:0030950,GO:0030952,GO:0031090,GO:0031135,GO:0031136,GO:0031137,GO:0031138,GO:0031139,GO:0031140,GO:0031142,GO:0031156,GO:0031163,GO:0031175,GO:0031234,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031328,GO:0031329,GO:0031330,GO:0031331,GO:0031334,GO:0031344,GO:0031346,GO:0031347,GO:0031348,GO:0031396,GO:0031397,GO:0031399,GO:0031400,GO:0031401,GO:0031410,GO:0031505,GO:0031529,GO:0031532,GO:0031641,GO:0031644,GO:0031646,GO:0031667,GO:0031668,GO:0031669,GO:0031670,GO:0031929,GO:0031930,GO:0031931,GO:0031932,GO:0031974,GO:0031981,GO:0031982,GO:0031984,GO:0031998,GO:0032092,GO:0032095,GO:0032101,GO:0032102,GO:0032103,GO:0032104,GO:0032107,GO:0032147,GO:0032148,GO:0032231,GO:0032233,GO:0032268,GO:0032269,GO:0032270,GO:0032271,GO:0032273,GO:0032434,GO:0032436,GO:0032456,GO:0032501,GO:0032502,GO:0032504,GO:0032516,GO:0032535,GO:0032774,GO:0032868,GO:0032869,GO:0032870,GO:0032879,GO:0032881,GO:0032885,GO:0032956,GO:0032970,GO:0032989,GO:0032990,GO:0032991,GO:0033036,GO:0033043,GO:0033554,GO:0033674,GO:0034064,GO:0034097,GO:0034198,GO:0034248,GO:0034250,GO:0034285,GO:0034599,GO:0034605,GO:0034622,GO:0034641,GO:0034645,GO:0034654,GO:0034660,GO:0034762,GO:0034763,GO:0034765,GO:0034766,GO:0035004,GO:0035023,GO:0035025,GO:0035051,GO:0035069,GO:0035096,GO:0035176,GO:0035239,GO:0035262,GO:0035264,GO:0035295,GO:0035303,GO:0035304,GO:0035306,GO:0035307,GO:0035556,GO:0035710,GO:0035722,GO:0036092,GO:0036211,GO:0036293,GO:0036294,GO:0036477,GO:0038201,GO:0038202,GO:0038203,GO:0040007,GO:0040008,GO:0040012,GO:0040014,GO:0040017,GO:0040018,GO:0040019,GO:0042060,GO:0042088,GO:0042093,GO:0042110,GO:0042127,GO:0042149,GO:0042176,GO:0042177,GO:0042220,GO:0042221,GO:0042254,GO:0042325,GO:0042326,GO:0042327,GO:0042493,GO:0042594,GO:0042692,GO:0042790,GO:0042802,GO:0042981,GO:0042995,GO:0043005,GO:0043021,GO:0043022,GO:0043043,GO:0043066,GO:0043067,GO:0043069,GO:0043085,GO:0043087,GO:0043170,GO:0043200,GO:0043201,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043254,GO:0043255,GO:0043269,GO:0043271,GO:0043276,GO:0043278,GO:0043279,GO:0043367,GO:0043368,GO:0043369,GO:0043373,GO:0043393,GO:0043412,GO:0043434,GO:0043455,GO:0043467,GO:0043487,GO:0043488,GO:0043489,GO:0043502,GO:0043549,GO:0043562,GO:0043565,GO:0043603,GO:0043604,GO:0043610,GO:0043621,GO:0043666,GO:0043900,GO:0043901,GO:0043902,GO:0043933,GO:0044057,GO:0044070,GO:0044085,GO:0044087,GO:0044089,GO:0044093,GO:0044212,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044427,GO:0044428,GO:0044431,GO:0044433,GO:0044437,GO:0044440,GO:0044444,GO:0044446,GO:0044454,GO:0044459,GO:0044463,GO:0044464,GO:0044571,GO:0044703,GO:0044706,GO:0044877,GO:0045017,GO:0045058,GO:0045063,GO:0045137,GO:0045165,GO:0045176,GO:0045229,GO:0045321,GO:0045428,GO:0045429,GO:0045472,GO:0045595,GO:0045597,GO:0045598,GO:0045637,GO:0045664,GO:0045666,GO:0045670,GO:0045685,GO:0045687,GO:0045727,GO:0045732,GO:0045786,GO:0045787,GO:0045792,GO:0045793,GO:0045807,GO:0045828,GO:0045834,GO:0045844,GO:0045859,GO:0045860,GO:0045861,GO:0045862,GO:0045887,GO:0045893,GO:0045927,GO:0045930,GO:0045931,GO:0045934,GO:0045935,GO:0045936,GO:0045937,GO:0045943,GO:0045945,GO:0045948,GO:0045995,GO:0046112,GO:0046320,GO:0046474,GO:0046483,GO:0046486,GO:0046488,GO:0046578,GO:0046579,GO:0046620,GO:0046622,GO:0046626,GO:0046628,GO:0046631,GO:0046632,GO:0046649,GO:0046677,GO:0046685,GO:0046777,GO:0046834,GO:0046854,GO:0046889,GO:0046890,GO:0046907,GO:0046999,GO:0048134,GO:0048135,GO:0048142,GO:0048255,GO:0048316,GO:0048382,GO:0048468,GO:0048471,GO:0048477,GO:0048513,GO:0048518,GO:0048519,GO:0048520,GO:0048522,GO:0048523,GO:0048534,GO:0048583,GO:0048584,GO:0048585,GO:0048589,GO:0048608,GO:0048609,GO:0048634,GO:0048636,GO:0048638,GO:0048639,GO:0048646,GO:0048660,GO:0048661,GO:0048666,GO:0048667,GO:0048699,GO:0048707,GO:0048713,GO:0048714,GO:0048729,GO:0048731,GO:0048738,GO:0048754,GO:0048812,GO:0048813,GO:0048856,GO:0048858,GO:0048869,GO:0050678,GO:0050679,GO:0050687,GO:0050688,GO:0050730,GO:0050731,GO:0050767,GO:0050769,GO:0050770,GO:0050772,GO:0050773,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050795,GO:0050803,GO:0050807,GO:0050848,GO:0050849,GO:0050877,GO:0050879,GO:0050881,GO:0050882,GO:0050890,GO:0050896,GO:0050920,GO:0050921,GO:0050994,GO:0051049,GO:0051050,GO:0051051,GO:0051056,GO:0051057,GO:0051094,GO:0051098,GO:0051099,GO:0051128,GO:0051130,GO:0051146,GO:0051147,GO:0051149,GO:0051153,GO:0051155,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051186,GO:0051219,GO:0051234,GO:0051239,GO:0051240,GO:0051241,GO:0051246,GO:0051247,GO:0051248,GO:0051252,GO:0051253,GO:0051254,GO:0051270,GO:0051272,GO:0051301,GO:0051321,GO:0051336,GO:0051338,GO:0051345,GO:0051347,GO:0051492,GO:0051493,GO:0051495,GO:0051496,GO:0051547,GO:0051549,GO:0051604,GO:0051641,GO:0051649,GO:0051703,GO:0051704,GO:0051705,GO:0051707,GO:0051716,GO:0051726,GO:0051896,GO:0051897,GO:0051930,GO:0051931,GO:0051960,GO:0051962,GO:0051963,GO:0051965,GO:0052742,GO:0055001,GO:0055002,GO:0055006,GO:0055007,GO:0055013,GO:0055021,GO:0055023,GO:0055024,GO:0055025,GO:0055086,GO:0055114,GO:0060033,GO:0060047,GO:0060048,GO:0060135,GO:0060251,GO:0060252,GO:0060255,GO:0060259,GO:0060284,GO:0060322,GO:0060359,GO:0060420,GO:0060421,GO:0060429,GO:0060446,GO:0060491,GO:0060537,GO:0060541,GO:0060548,GO:0060562,GO:0060627,GO:0060998,GO:0060999,GO:0061013,GO:0061041,GO:0061050,GO:0061051,GO:0061061,GO:0061136,GO:0061138,GO:0061458,GO:0061919,GO:0062012,GO:0062013,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070482,GO:0070671,GO:0070873,GO:0070884,GO:0070885,GO:0070887,GO:0071214,GO:0071229,GO:0071230,GO:0071233,GO:0071310,GO:0071322,GO:0071324,GO:0071329,GO:0071345,GO:0071349,GO:0071375,GO:0071417,GO:0071453,GO:0071456,GO:0071470,GO:0071495,GO:0071496,GO:0071554,GO:0071555,GO:0071704,GO:0071826,GO:0071840,GO:0071849,GO:0071850,GO:0071851,GO:0071852,GO:0071944,GO:0072347,GO:0072359,GO:0072527,GO:0072528,GO:0080084,GO:0080090,GO:0080134,GO:0080135,GO:0090066,GO:0090068,GO:0090069,GO:0090070,GO:0090153,GO:0090257,GO:0090303,GO:0090304,GO:0090335,GO:0090407,GO:0090527,GO:0090559,GO:0097159,GO:0097305,GO:0097327,GO:0097428,GO:0097435,GO:0097447,GO:0097458,GO:0097659,GO:0097708,GO:0098552,GO:0098562,GO:0098588,GO:0098781,GO:0098791,GO:0098805,GO:0098852,GO:0099174,GO:0104004,GO:0106056,GO:0106057,GO:0110020,GO:0110053,GO:0120025,GO:0120032,GO:0120034,GO:0120035,GO:0120036,GO:0120038,GO:0120039,GO:0140096,GO:0140110,GO:1900006,GO:1900034,GO:1900076,GO:1900078,GO:1900087,GO:1900457,GO:1900459,GO:1901214,GO:1901216,GO:1901355,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901652,GO:1901653,GO:1901654,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1901799,GO:1901800,GO:1901836,GO:1901838,GO:1901861,GO:1901863,GO:1901987,GO:1901988,GO:1901989,GO:1901990,GO:1901991,GO:1901992,GO:1902074,GO:1902105,GO:1902369,GO:1902373,GO:1902531,GO:1902532,GO:1902533,GO:1902659,GO:1902661,GO:1902667,GO:1902669,GO:1902680,GO:1902743,GO:1902745,GO:1902749,GO:1902750,GO:1902751,GO:1902806,GO:1902808,GO:1902903,GO:1902905,GO:1902930,GO:1902932,GO:1903034,GO:1903036,GO:1903050,GO:1903051,GO:1903052,GO:1903311,GO:1903312,GO:1903320,GO:1903321,GO:1903362,GO:1903363,GO:1903364,GO:1903426,GO:1903428,GO:1903429,GO:1903431,GO:1903506,GO:1903508,GO:1903664,GO:1903689,GO:1903691,GO:1903706,GO:1903792,GO:1903795,GO:1903796,GO:1903935,GO:1903959,GO:1903960,GO:1903998,GO:1904000,GO:1904035,GO:1904036,GO:1904054,GO:1904056,GO:1904058,GO:1904192,GO:1904193,GO:1904195,GO:1904197,GO:1904201,GO:1904202,GO:1904204,GO:1904206,GO:1904212,GO:1904213,GO:1904396,GO:1904398,GO:1904407,GO:1904424,GO:1904426,GO:1904475,GO:1904477,GO:1904688,GO:1904690,GO:1905038,GO:1905097,GO:1905099,GO:1905207,GO:1905209,GO:1905330,GO:1905332,GO:1905356,GO:1990253,GO:1990837,GO:1990904,GO:1990928,GO:2000026,GO:2000045,GO:2000058,GO:2000060,GO:2000112,GO:2000145,GO:2000147,GO:2000232,GO:2000234,GO:2000241,GO:2000242,GO:2000243,GO:2000253,GO:2000331,GO:2000377,GO:2000379,GO:2000725,GO:2000727,GO:2000765,GO:2000767,GO:2001023,GO:2001106,GO:2001108,GO:2001141
EggNOG free text desc.phosphatidylinositol kinase activity
EggNOG OGsCOG5032@1,KOG0891@2759
EC2.7.11.1
COG Functional cat.BDLTU
BiGG ReactioniMM904.YKL203C,iND750.YKL203C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01001,ko04131
Hectar predicted targeting categoryother localisation
Exons8
Model size2640
Cds size2640
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig565.13099.1prot_H-elongata_contig565.13099.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig565 876..6989 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930919.32579-CDS-H-elongata_contig565:875..10191622930919.32579-CDS-H-elongata_contig565:875..1019Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig565 876..1019 +
1691679624.650338-CDS-H-elongata_contig565:875..10191691679624.650338-CDS-H-elongata_contig565:875..1019Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig565 876..1019 +
1622930919.3439968-CDS-H-elongata_contig565:1487..16491622930919.3439968-CDS-H-elongata_contig565:1487..1649Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig565 1488..1649 +
1691679624.663778-CDS-H-elongata_contig565:1487..16491691679624.663778-CDS-H-elongata_contig565:1487..1649Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig565 1488..1649 +
1622930919.3560362-CDS-H-elongata_contig565:2082..22171622930919.3560362-CDS-H-elongata_contig565:2082..2217Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig565 2083..2217 +
1691679624.6725738-CDS-H-elongata_contig565:2082..22171691679624.6725738-CDS-H-elongata_contig565:2082..2217Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig565 2083..2217 +
1622930919.3698254-CDS-H-elongata_contig565:2668..28211622930919.3698254-CDS-H-elongata_contig565:2668..2821Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig565 2669..2821 +
1691679624.6823256-CDS-H-elongata_contig565:2668..28211691679624.6823256-CDS-H-elongata_contig565:2668..2821Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig565 2669..2821 +
1622930919.3850434-CDS-H-elongata_contig565:3063..31891622930919.3850434-CDS-H-elongata_contig565:3063..3189Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig565 3064..3189 +
1691679624.6931648-CDS-H-elongata_contig565:3063..31891691679624.6931648-CDS-H-elongata_contig565:3063..3189Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig565 3064..3189 +
1622930919.4007585-CDS-H-elongata_contig565:3542..51581622930919.4007585-CDS-H-elongata_contig565:3542..5158Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig565 3543..5158 +
1691679624.706796-CDS-H-elongata_contig565:3542..51581691679624.706796-CDS-H-elongata_contig565:3542..5158Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig565 3543..5158 +
1622930919.414142-CDS-H-elongata_contig565:5631..58781622930919.414142-CDS-H-elongata_contig565:5631..5878Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig565 5632..5878 +
1691679624.7215247-CDS-H-elongata_contig565:5631..58781691679624.7215247-CDS-H-elongata_contig565:5631..5878Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig565 5632..5878 +
1622930919.4277995-CDS-H-elongata_contig565:6932..69891622930919.4277995-CDS-H-elongata_contig565:6932..6989Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig565 6933..6989 +
1691679624.7305436-CDS-H-elongata_contig565:6932..69891691679624.7305436-CDS-H-elongata_contig565:6932..6989Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig565 6933..6989 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig565.13099.1

>prot_H-elongata_contig565.13099.1 ID=prot_H-elongata_contig565.13099.1|Name=mRNA_H-elongata_contig565.13099.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=880bp
LISIQVIPSKQRPRKISMQGEDGRDYMFLLKGHEDLRQDERVMQLFGQVN
ALFGKDRRNYSHDLFIQRYAVSPLSHNAGVVGWVPNTDTLHQLIRQYREK
RKILLNIEHRLMSQKAGPCDYETLNIMQKVEVFEMSLKYTAGQDLYKILW
LKSKNSEAWLERRTCYTRSLAVMSMVGYILGLGDRHPSNLMLDRFTGKIL
HIDFGDCFEVAMNRGKFPERIPFRLTRMLVNAMEVSRLLPVSGVEGNFRN
TCELVMSVLRESRDSLVAMLEAFVHDPLISWRLLGTETLEDEASHHSGTG
GPPSPPDPSPPPQTQQQRPPSNMERIALPPRVSSPRAGQPPGRSFGADTN
APPLAAQAPLASPHLNPVNGGERAKGLRDASRNPPQHTGVVTATIEFLAA
ADTAAAAAEAEPYYTRHGYRVVAGVGTTCVKGVGAGVDDGSGHGTDSGSS
VKECVGRVGPSGSNVLPPSTAMMSHSHRGATSVPRPLTLAGMTPLQPVPE
FGQGGRESDPDSDATEETPQEKRNSRVGVLGARPVSSRVNGGSDAPNGAT
PDEGGGFHAANIGGGGNVEGSDSRRVAITTTEGDTAPAAIAADTSNLTRT
EREHVLSAAISSNYVRQGSVRVYPAARGGAMDEAPSVTDGRMDGRRRIRL
GDEDGSVRPGTSAAVDVRRPRSASISVHGSRPRRAPGTGGGAGNEGGNVS
GDRNRDRDDVDDEEEEERLAAAAAAAAAAIRDASMTQSERRRSTSLLQQS
SSFKPDLYLQIQALSNRTNTSLHDTFASRTPQPDDDPSELASLTASRFSR
STRERDLRAQHGIEGGSAPQEALNQKAVKVIRRVEDKLAGLDFHNDEPYD
VDKQVDYLIQQATGNDRLCQCFIGWCPFW*
back to top

mRNA from alignment at H-elongata_contig565:876..6989+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig565.13099.1 ID=mRNA_H-elongata_contig565.13099.1|Name=mRNA_H-elongata_contig565.13099.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=6114bp|location=Sequence derived from alignment at H-elongata_contig565:876..6989+ (Himanthalia elongata Himel1 dioecious)
CTCATTTCGATACAGGTGATCCCCTCCAAGCAGCGGCCGCGGAAGATCAG
CATGCAAGGGGAGGACGGTCGCGATTACATGTTCCTCCTGAAGGGCCACG
AGGACCTCAGGCAGGACGAGAGGGTCATGCAGCTATTCGGCCAGGTGAGA
CGAGAGGCTAAGGCTAGCGTTAGGGTTAGCCGCCCCACCCCGCCCCGCAC
TCTCTTGGTGGAAGTATCTTCTTAATGGCATCCTATCCAGAACGCACGAA
ATAAATAGGCAGCTCGATCGGAATTGTGACATTGTCCCTTAGAGTAGTTT
TGGTAAAATATTTTGTCGAATCTTGACTAAAGACTAAATGTGTTACATCT
TCCCCATATTGGGCACCACCTTGTCGATGTATAACATAGTCGTGTCTTGT
CGGCAAATGAACTGTAGATACTCTAAATACTGCCAAGCTATTGGTGCCGC
GGTGTTGTTTAGGGGATCATGCCAAAATGTGCTGAAAATAATGTGGTAAT
GGCACTCGTGTTGTCTAGTGGGTGGCGTCGTAATGCACTGAAAATAAGGC
CTTGTTTCGTGGGGGGCGCGATATGCTATTGTCATTCGTTTTGTGGTGTT
GTCTTGAGGCAGGTGAACGCCCTTTTCGGCAAAGACCGCCGCAACTACAG
CCATGATCTATTCATCCAGAGGTACGCGGTGTCTCCTCTCAGCCACAACG
CCGGGGTCGTTGGCTGGGTGCCAAACACCGACACGCTGCACCAGCTGATT
CGACAGTACCGCGAGAAAAGGAAGGTGGGGAACTGTTCTTCGGAACGTTC
AACTCGTTTTTGGTGGGTATACAGTACATGAAGGGGGTAGGGAACTGTTC
TTCGGAACGTTCCACTCGTTTTTGGTAACAGTATGAAATGTGCTCATTTA
TCCTTGTTATTGTCTTATCCCTCTCTTGTGTCACTTTATATCTTCGTTTT
TTCTCTCTCTCTATTTATAACCACTCAATCCGTCATAGTCCCTTTCATTC
TAATAATAGTCATTGTAGGCTAGTATGTGCGTTTTTATGTGGTGTGGTTG
TGTTAACCATTTTGGAACTGAATTTCAAGTTTTATATTGAATTTAGTATG
TAAAAAAACAGATCGAGTTCCGTAGGGGTTAATTCAGAATAAAACCCCAC
TCTCTTTTTGACACATAAAGATCGACATATTATTCGCTGCTTCGGATCGC
GTGACAGATCCTGCTGAACATCGAGCACCGGCTGATGAGTCAGAAAGCAG
GACCGTGCGACTACGAGACATTGAACATTATGCAGAAGGTGGAGGTGTTT
GAGATGTCCCTCAAATACACGGCGGGCCAAGATCTTTACAAGGTACAAAA
TACTACAAGGTACAAAATACTACAAGGTACAGGGTTTTTGAGTAGATATT
ACAGTGCCGTACTATTTTAACAATAGTTGGAAAGCTGTCCTCTGGAGCTA
TTAATATATAAACTTTTACAGTACTGTGGGGTATGGTCCAGCCAGCGTCG
GCGATGAAGACGCGATGAGGCATTTAGGTGATGGGATGAGGGGATGATAG
ACGGCTTCAGATCAGATGGGAAACTCATGGCGTATTGTGGGCGTATTGGG
AAATATCAGGGATACTGTATACTATACTGTAGATATTGTATACTATACTA
TTAATAGTACTAGATACTGTACGCTATACTAAATACTATATATTGTATCA
GTTTCGATATATAGTATATACTATATACTATAGATAGTATACACTATATT
AAGTATATAGTATACTATAAATACTATATACTCTATGCTCTAGATACTAT
GGCTTAAGTCGAAGAACAGCGAGGCCTGGCTGGAGAGGCGCACCTGCTAC
ACTCGATCTCTGGCGGTGATGAGCATGGTGGGCTACATCCTGGGACTGGG
CGATCGGCACCCTTCGAACCTTATGCTCGACCGCTTCACCGGCAAGGTTG
GATGATATTTTATTTTAGATTGTATTTTAGGTTTTGATGCTTTAAAGAGG
GATTCGTTTATGACATACCGTGGTATAATCACCACACACACCGTGGTATT
TAATAGTGTCGCTTCCTCGGCACTCTCTTCCATGGAGCATGGAACGTGCT
AAGCATTATCGTTAGGATTTTTGGTAGGGTGCTGGAAATTGTACTAGTAT
TAGTGCTGAAATCACTTTCATGCTGTTTGCCGCGACAGATCCTGCACATC
GACTTCGGTGACTGTTTCGAGGTTGCCATGAACAGGGGAAAGTTCCCGGA
GCGCATACCGTTTCGCCTCACGCGGATGCTCGTGAACGCCATGGAAGTGA
GTCGCTTGTTGCCTGTCCTAAATCTTCCCTATCCCCTGCGGCGATGATTG
ATGATTGATAGATGACTATTGATTGATTGATGACTATTGATTGATTGATG
ACTATTGATTGATCGACGATGATTGATTGACCATTGATATTCGGTTGATG
ATTGATTGATGATTATTGATAATTGGTTGATGATTGATTGATGATTATGA
TTGATGATTCATTCATTTTTACCCACCTATTAATAGGCAATAGTCTTGGG
CAGGTTATCTTTATCCGCGCCAGCGCAATCCTGTTCCTCGTTTTTCTTTT
TTTCTTTTTACACGAACATGCACGCTATTCACGTCATAAAGTTTTGATAC
AACACTGATTAATAAAGGTGAGCGGTGTCGAAGGCAACTTCCGCAACACA
TGCGAGCTGGTGATGTCCGTGCTGCGCGAGTCCCGCGACAGCCTGGTGGC
CATGCTGGAGGCTTTCGTCCACGACCCTCTAATCTCATGGCGCCTGCTGG
GCACCGAGACCCTAGAAGACGAGGCCAGCCACCACAGCGGCACTGGTGGA
CCACCCTCTCCACCCGACCCTTCCCCACCGCCCCAGACGCAGCAGCAGCG
ACCACCTTCGAACATGGAACGCATCGCCCTGCCGCCACGCGTGTCCTCCC
CTCGAGCCGGACAGCCACCCGGTCGTTCGTTCGGCGCTGACACCAATGCC
CCCCCTCTGGCCGCACAGGCGCCTCTCGCTTCTCCCCATCTCAATCCTGT
CAACGGAGGGGAACGGGCGAAGGGGCTGCGCGATGCCTCCAGGAATCCGC
CGCAGCACACAGGTGTTGTGACAGCAACGATCGAATTTTTAGCAGCGGCC
GACACAGCAGCAGCAGCAGCAGAAGCGGAACCATATTATACTCGTCATGG
CTACCGGGTAGTAGCAGGAGTTGGTACGACATGCGTTAAAGGGGTGGGGG
CGGGGGTTGACGATGGCTCGGGTCATGGAACGGACTCAGGCTCTAGCGTC
AAGGAGTGTGTAGGGAGGGTGGGCCCGTCTGGGTCGAATGTGCTGCCGCC
TTCGACTGCGATGATGAGCCACAGCCACAGAGGAGCAACTTCCGTCCCGA
GGCCGCTGACACTCGCCGGCATGACGCCGCTCCAGCCGGTCCCGGAGTTC
GGCCAAGGGGGGAGGGAATCGGACCCCGATAGCGACGCGACAGAAGAGAC
CCCACAGGAGAAGCGGAACTCTCGAGTAGGCGTGTTGGGAGCAAGGCCTG
TCAGCAGCCGGGTCAACGGCGGAAGCGATGCCCCGAACGGAGCGACACCG
GATGAGGGAGGTGGCTTTCATGCTGCCAACATTGGTGGCGGAGGTAACGT
TGAGGGGAGTGATAGTAGGAGGGTCGCCATAACAACGACAGAAGGTGATA
CCGCTCCTGCCGCGATCGCCGCCGACACTTCAAATCTGACGCGGACAGAA
AGGGAGCATGTGCTCAGTGCAGCAATAAGTTCGAATTACGTGCGCCAGGG
AAGTGTTAGGGTATACCCTGCTGCGCGTGGCGGGGCTATGGATGAGGCCC
CGAGTGTGACTGACGGTCGCATGGATGGGAGGAGAAGGATCAGGCTTGGT
GATGAAGATGGCTCGGTTAGGCCAGGCACGAGTGCGGCCGTGGACGTGCG
CCGCCCGCGTAGCGCGTCGATTTCCGTTCATGGGAGCAGGCCGAGGAGAG
CCCCAGGAACAGGCGGTGGTGCTGGCAACGAGGGAGGTAATGTTTCTGGT
GATCGTAATCGTGATCGTGATGACGTAGATGATGAAGAAGAGGAAGAGAG
GTTGGCTGCCGCCGCGGCTGCTGCTGCGGCAGCTATACGGGATGCATCGA
TGACGCAAAGCGAGCGCCGTAGGAGTACCAGTCTGCTGCAGCAGAGCTCG
AGTTTCAAGCCCGACCTGTATCTCCAGATCCAGGCGCTGTCCAACCGTAC
CAACACATCTCTGCACGACACCTTCGCGTCTAGGTGGGAAAGGCCCTCGG
CGCGCCTTTACGATTCCACCCTGCTGACATTTGGGGATGTGTTTCTCTTA
TTTTTTGTTTGTGGCCGTTGATTTTTCCCGCCAAGATCACCTGGTGGCTG
AGGGTATGGCGGGAATCTTTGATATTCCGACTCGAGTTGTTTTGGGTACA
CGTCCACGTCCACGTCGGCGGGGCCCTAGTCTATTACGAAAAGTCCCCTA
AAGAACGTTTCCCCCTTTTTCATTTTTATTTTATTGAGCTGAAAGTTCCA
AACCTTTACGGCGTTGGTTGAAATAATCTGAAGTTTCGAGGAGAGACAAA
TGTCTACCCCTGACTGAGCAATCTCGGGAAGAGTCGTGATTATTTTATTC
TCCCTGACAGAAGGGAGGCGTTCCTTCCTTCGAAGATAGTCCTAACCCCG
TTCCTTTTTTGTGATATGTGTGACGCGATGTGGCGAGGCGCTGATAGGAT
CGGGAGGACGCCGCAACCGGATGACGACCCGTCGGAGCTGGCCTCTCTGA
CGGCCTCGCGATTCTCACGCAGCACCCGCGAAAGGGATCTGAGGGCGCAG
CACGGCATCGAGGGGGGATCGGCTCCCCAGGAGGCCCTGAACCAAAAAGC
GGTGAAGGTAATCAGAAGGGTGGAGGACAAACTGGCAGGGCTTGATTTCC
ACAACGACGAGCCTTACGACGTGGACAAGCAAGTTGATTACCTCATCCAG
CAGGTGCGAGGAGAGAAGTAAAATATTATTTTTATTAAAAAAAAAACTTG
AATAAAAATAGGATATGATTTTGAATATGAATATACCTGGTAAGGCATTA
TAATAGGTTATTAGACGAGAGGAGATGGGCTACTGGTGTACCCCGACAGT
GTTTCGATATTAATGCCTTAATATCAATTTAACGCATGGTAGCAGCGGGG
AAGGCAAAAACGGCTCGATTTGGTACAAAGCCTTTTCTTTCCCCGGTTCC
GTAGGGCTAATATTATTATTATCCCAATATATGTTGTTAATAGGCTATTA
TCATACCAGTATATGTTTTTAATAGGCTATTATTAGAACAGTTTTTTAAT
AGGATATTGAGCAGCTTGTGTTGAGCAGTCTATAAACCCACACATTCGCC
GAGTAGTCAAATATTTAACTAAAGAGTAATGTACCAGATGTGGTATTGTG
TTATTAATAGTGTAGTAGTACACCGTGCTATTAATACTGTATTATTGTAC
TATTAATATTATAATAGTGTGCTATTAATAGTGTACTATTGTGCTATTAA
TATTATAATAGTGCGCTATTAATAGTGTAGTAGTATACCGTGCTATTACT
AGTGTATTATTGTGCTATTATTAGTGCAGTAGTATACCGTGGTATTAATA
GTGTATTAGTATACCATGCTGTAATAATGGTATGGTACTGTACCGTAAGG
AGATTAGGGTGCCCTTGATCCTCCGTCCTCCCCATTAAAGGATTAAACCG
AGAACAACGGTAGAAGGTGAGGGCGCATTGGTTGGCTTCTTCCGCCGTTT
GAGGAGATTCATTTCCATCCAGTTGTAGCATTGAATCCATGAATCCATCT
TATACAGTTAATCCATCTTATACAGTTATGCCACATTATACTAGAAAAAT
ATACAGTAATGTCATTTAACAGCACCGCGCCGTTTACCACACCATCACCA
AGAGTCGCAAGCTCCCATGCTCCTGCTGACGACCTCCGCCCCCACCCTTG
CTGCTACTGACGACGATGGCGGCCACCTGTCTTATCCACCATGATCGGGC
GGCGTAGGCCACGGGGAACGACAGGCTCTGCCAATGCTTCATCGGGTGGT
GTCCCTTCTGGTGA
back to top

Coding sequence (CDS) from alignment at H-elongata_contig565:876..6989+

>mRNA_H-elongata_contig565.13099.1 ID=mRNA_H-elongata_contig565.13099.1|Name=mRNA_H-elongata_contig565.13099.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=5280bp|location=Sequence derived from alignment at H-elongata_contig565:876..6989+ (Himanthalia elongata Himel1 dioecious)
CTCATTTCGATACAGGTGATCCCCTCCAAGCAGCGGCCGCGGAAGATCAG
CATGCAAGGGGAGGACGGTCGCGATTACATGTTCCTCCTGAAGGGCCACG
AGGACCTCAGGCAGGACGAGAGGGTCATGCAGCTATTCGGCCAGCTCATT
TCGATACAGGTGATCCCCTCCAAGCAGCGGCCGCGGAAGATCAGCATGCA
AGGGGAGGACGGTCGCGATTACATGTTCCTCCTGAAGGGCCACGAGGACC
TCAGGCAGGACGAGAGGGTCATGCAGCTATTCGGCCAGGTGAACGCCCTT
TTCGGCAAAGACCGCCGCAACTACAGCCATGATCTATTCATCCAGAGGTA
CGCGGTGTCTCCTCTCAGCCACAACGCCGGGGTCGTTGGCTGGGTGCCAA
ACACCGACACGCTGCACCAGCTGATTCGACAGTACCGCGAGAAAAGGAAG
GTGAACGCCCTTTTCGGCAAAGACCGCCGCAACTACAGCCATGATCTATT
CATCCAGAGGTACGCGGTGTCTCCTCTCAGCCACAACGCCGGGGTCGTTG
GCTGGGTGCCAAACACCGACACGCTGCACCAGCTGATTCGACAGTACCGC
GAGAAAAGGAAGATCCTGCTGAACATCGAGCACCGGCTGATGAGTCAGAA
AGCAGGACCGTGCGACTACGAGACATTGAACATTATGCAGAAGGTGGAGG
TGTTTGAGATGTCCCTCAAATACACGGCGGGCCAAGATCTTTACAAGATC
CTGCTGAACATCGAGCACCGGCTGATGAGTCAGAAAGCAGGACCGTGCGA
CTACGAGACATTGAACATTATGCAGAAGGTGGAGGTGTTTGAGATGTCCC
TCAAATACACGGCGGGCCAAGATCTTTACAAGATACTATGGCTTAAGTCG
AAGAACAGCGAGGCCTGGCTGGAGAGGCGCACCTGCTACACTCGATCTCT
GGCGGTGATGAGCATGGTGGGCTACATCCTGGGACTGGGCGATCGGCACC
CTTCGAACCTTATGCTCGACCGCTTCACCGGCAAGATACTATGGCTTAAG
TCGAAGAACAGCGAGGCCTGGCTGGAGAGGCGCACCTGCTACACTCGATC
TCTGGCGGTGATGAGCATGGTGGGCTACATCCTGGGACTGGGCGATCGGC
ACCCTTCGAACCTTATGCTCGACCGCTTCACCGGCAAGATCCTGCACATC
GACTTCGGTGACTGTTTCGAGGTTGCCATGAACAGGGGAAAGTTCCCGGA
GCGCATACCGTTTCGCCTCACGCGGATGCTCGTGAACGCCATGGAAGTGA
GTCGCTTGTTGCCTATCCTGCACATCGACTTCGGTGACTGTTTCGAGGTT
GCCATGAACAGGGGAAAGTTCCCGGAGCGCATACCGTTTCGCCTCACGCG
GATGCTCGTGAACGCCATGGAAGTGAGTCGCTTGTTGCCTGTGAGCGGTG
TCGAAGGCAACTTCCGCAACACATGCGAGCTGGTGATGTCCGTGCTGCGC
GAGTCCCGCGACAGCCTGGTGGCCATGCTGGAGGCTTTCGTCCACGACCC
TCTAATCTCATGGCGCCTGCTGGGCACCGAGACCCTAGAAGACGAGGCCA
GCCACCACAGCGGCACTGGTGGACCACCCTCTCCACCCGACCCTTCCCCA
CCGCCCCAGACGCAGCAGCAGCGACCACCTTCGAACATGGAACGCATCGC
CCTGCCGCCACGCGTGTCCTCCCCTCGAGCCGGACAGCCACCCGGTCGTT
CGTTCGGCGCTGACACCAATGCCCCCCCTCTGGCCGCACAGGCGCCTCTC
GCTTCTCCCCATCTCAATCCTGTCAACGGAGGGGAACGGGCGAAGGGGCT
GCGCGATGCCTCCAGGAATCCGCCGCAGCACACAGGTGTTGTGACAGCAA
CGATCGAATTTTTAGCAGCGGCCGACACAGCAGCAGCAGCAGCAGAAGCG
GAACCATATTATACTCGTCATGGCTACCGGGTAGTAGCAGGAGTTGGTAC
GACATGCGTTAAAGGGGTGGGGGCGGGGGTTGACGATGGCTCGGGTCATG
GAACGGACTCAGGCTCTAGCGTCAAGGAGTGTGTAGGGAGGGTGGGCCCG
TCTGGGTCGAATGTGCTGCCGCCTTCGACTGCGATGATGAGCCACAGCCA
CAGAGGAGCAACTTCCGTCCCGAGGCCGCTGACACTCGCCGGCATGACGC
CGCTCCAGCCGGTCCCGGAGTTCGGCCAAGGGGGGAGGGAATCGGACCCC
GATAGCGACGCGACAGAAGAGACCCCACAGGAGAAGCGGAACTCTCGAGT
AGGCGTGTTGGGAGCAAGGCCTGTCAGCAGCCGGGTCAACGGCGGAAGCG
ATGCCCCGAACGGAGCGACACCGGATGAGGGAGGTGGCTTTCATGCTGCC
AACATTGGTGGCGGAGGTAACGTTGAGGGGAGTGATAGTAGGAGGGTCGC
CATAACAACGACAGAAGGTGATACCGCTCCTGCCGCGATCGCCGCCGACA
CTTCAAATCTGACGCGGACAGAAAGGGAGCATGTGCTCAGTGCAGCAATA
AGTTCGAATTACGTGCGCCAGGGAAGTGTTAGGGTATACCCTGCTGCGCG
TGGCGGGGCTATGGATGAGGCCCCGAGTGTGACTGACGGTCGCATGGATG
GGAGGAGAAGGATCAGGCTTGGTGATGAAGATGGCTCGGTTAGGCCAGGC
ACGAGTGCGGCCGTGGACGTGCGCCGCCCGCGTAGCGCGTCGATTTCCGT
TCATGGGAGCAGGCCGAGGAGAGCCCCAGGAACAGGCGGTGGTGCTGGCA
ACGAGGGAGGTAATGTTTCTGGTGATCGTAATCGTGATCGTGATGACGTA
GATGATGAAGAAGAGGAAGAGAGGTTGGCTGCCGCCGCGGCTGCTGCTGC
GGCAGCTATACGGGATGCATCGATGACGCAAAGCGAGCGCCGTAGGAGTA
CCAGTCTGCTGCAGCAGAGCTCGAGTTTCAAGCCCGACCTGTATCTCCAG
ATCCAGGCGCTGTCCAACCGTACCAACACATCTCTGCACGACACCTTCGC
GTCTAGGTGAGCGGTGTCGAAGGCAACTTCCGCAACACATGCGAGCTGGT
GATGTCCGTGCTGCGCGAGTCCCGCGACAGCCTGGTGGCCATGCTGGAGG
CTTTCGTCCACGACCCTCTAATCTCATGGCGCCTGCTGGGCACCGAGACC
CTAGAAGACGAGGCCAGCCACCACAGCGGCACTGGTGGACCACCCTCTCC
ACCCGACCCTTCCCCACCGCCCCAGACGCAGCAGCAGCGACCACCTTCGA
ACATGGAACGCATCGCCCTGCCGCCACGCGTGTCCTCCCCTCGAGCCGGA
CAGCCACCCGGTCGTTCGTTCGGCGCTGACACCAATGCCCCCCCTCTGGC
CGCACAGGCGCCTCTCGCTTCTCCCCATCTCAATCCTGTCAACGGAGGGG
AACGGGCGAAGGGGCTGCGCGATGCCTCCAGGAATCCGCCGCAGCACACA
GGTGTTGTGACAGCAACGATCGAATTTTTAGCAGCGGCCGACACAGCAGC
AGCAGCAGCAGAAGCGGAACCATATTATACTCGTCATGGCTACCGGGTAG
TAGCAGGAGTTGGTACGACATGCGTTAAAGGGGTGGGGGCGGGGGTTGAC
GATGGCTCGGGTCATGGAACGGACTCAGGCTCTAGCGTCAAGGAGTGTGT
AGGGAGGGTGGGCCCGTCTGGGTCGAATGTGCTGCCGCCTTCGACTGCGA
TGATGAGCCACAGCCACAGAGGAGCAACTTCCGTCCCGAGGCCGCTGACA
CTCGCCGGCATGACGCCGCTCCAGCCGGTCCCGGAGTTCGGCCAAGGGGG
GAGGGAATCGGACCCCGATAGCGACGCGACAGAAGAGACCCCACAGGAGA
AGCGGAACTCTCGAGTAGGCGTGTTGGGAGCAAGGCCTGTCAGCAGCCGG
GTCAACGGCGGAAGCGATGCCCCGAACGGAGCGACACCGGATGAGGGAGG
TGGCTTTCATGCTGCCAACATTGGTGGCGGAGGTAACGTTGAGGGGAGTG
ATAGTAGGAGGGTCGCCATAACAACGACAGAAGGTGATACCGCTCCTGCC
GCGATCGCCGCCGACACTTCAAATCTGACGCGGACAGAAAGGGAGCATGT
GCTCAGTGCAGCAATAAGTTCGAATTACGTGCGCCAGGGAAGTGTTAGGG
TATACCCTGCTGCGCGTGGCGGGGCTATGGATGAGGCCCCGAGTGTGACT
GACGGTCGCATGGATGGGAGGAGAAGGATCAGGCTTGGTGATGAAGATGG
CTCGGTTAGGCCAGGCACGAGTGCGGCCGTGGACGTGCGCCGCCCGCGTA
GCGCGTCGATTTCCGTTCATGGGAGCAGGCCGAGGAGAGCCCCAGGAACA
GGCGGTGGTGCTGGCAACGAGGGAGGTAATGTTTCTGGTGATCGTAATCG
TGATCGTGATGACGTAGATGATGAAGAAGAGGAAGAGAGGTTGGCTGCCG
CCGCGGCTGCTGCTGCGGCAGCTATACGGGATGCATCGATGACGCAAAGC
GAGCGCCGTAGGAGTACCAGTCTGCTGCAGCAGAGCTCGAGTTTCAAGCC
CGACCTGTATCTCCAGATCCAGGCGCTGTCCAACCGTACCAACACATCTC
TGCACGACACCTTCGCGTCTAGGACGCCGCAACCGGATGACGACCCGTCG
GAGCTGGCCTCTCTGACGGCCTCGCGATTCTCACGCAGCACCCGCGAAAG
GGATCTGAGGGCGCAGCACGGCATCGAGGGGGGATCGGCTCCCCAGGAGG
CCCTGAACCAAAAAGCGGTGAAGGTAATCAGAAGGGTGGAGGACAAACTG
GCAGGGCTTGATTTCCACAACGACGAGCCTTACGACGTGGACAAGCAAGT
TGATTACCTCATCCAGCAGGACGCCGCAACCGGATGACGACCCGTCGGAG
CTGGCCTCTCTGACGGCCTCGCGATTCTCACGCAGCACCCGCGAAAGGGA
TCTGAGGGCGCAGCACGGCATCGAGGGGGGATCGGCTCCCCAGGAGGCCC
TGAACCAAAAAGCGGTGAAGGTAATCAGAAGGGTGGAGGACAAACTGGCA
GGGCTTGATTTCCACAACGACGAGCCTTACGACGTGGACAAGCAAGTTGA
TTACCTCATCCAGCAGGCCACGGGGAACGACAGGCTCTGCCAATGCTTCA
TCGGGTGGTGTCCCTTCTGGTGAGCCACGGGGAACGACAGGCTCTGCCAA
TGCTTCATCGGGTGGTGTCCCTTCTGGTGA
back to top