mRNA_H-elongata_contig56441.13091.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig56441.13091.1 vs. uniprot
Match: D8LKZ5_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKZ5_ECTSI) HSP 1 Score: 263 bits (671), Expect = 1.610e-82 Identity = 130/173 (75.14%), Postives = 143/173 (82.66%), Query Frame = 1
Query: 1 QVRRFITLVDVLYERGVKLVCLAQAPCSELLDPGPGNRADMPDEVFSFGRTASRLAEMQGEDYLKRRVLETAEGRRNWRSTENYLVQFTAEQLSDQELYKIWEAYDVNGDGKMDREELSFLMEDLSEAKNGHRNVSTEALDMTFEAMDVKKEGYISKKTFMTFGRRFGLIIWW 519
QVRR ITLVDV+YERGVKLVCLA+A EL DPGPG R DMPDEVF+FGRTASRL EMQG+ YLKR WR +ENYLV+FT EQLSD+EL KIWEAYDVNGDG+MDREELSFLMEDL EAKNGHRNV TEALD TF+AMD++ EGY+S KTFM FGRRFGL +WW
Sbjct: 393 QVRRLITLVDVMYERGVKLVCLAEALPLELFDPGPGRREDMPDEVFAFGRTASRLTEMQGQKYLKR----------TWRPSENYLVRFTGEQLSDEELVKIWEAYDVNGDGRMDREELSFLMEDLCEAKNGHRNVPTEALDTTFKAMDLENEGYVSNKTFMRFGRRFGLTVWW 555
BLAST of mRNA_H-elongata_contig56441.13091.1 vs. uniprot
Match: A0A836C7Q8_9STRA (AFG1-like ATPase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7Q8_9STRA) HSP 1 Score: 174 bits (440), Expect = 3.910e-48 Identity = 90/175 (51.43%), Postives = 118/175 (67.43%), Query Frame = 1
Query: 7 RRFITLVDVLYERGVKLVCLAQAPCSELLDPGPG--NRADMPDEVFSFGRTASRLAEMQGEDYLKRRVLETAEGRRNWR-STENYLVQFTAEQLSDQELYKIWEAYDVNGDGKMDREELSFLMEDLSEAKNGHRNVSTEALDMTFEAMDVKKEGYISKKTFMTFGRRFGLIIWWG 522
RRFITLVD LYER VKLVCLA+ P ++L P PG R+ MPDEVF+F RTASRLAEMQG +YLKR WR S +LV F + +++ L +W YD++GD K+D EL +M+D+SE K+GHRNV EA+ TF AMD K +GYI++ F+ G ++G+ +WWG
Sbjct: 402 RRFITLVDTLYERNVKLVCLAECPPTQLFAPPPGAKGRSAMPDEVFAFDRTASRLAEMQGREYLKR----------CWRPSGPEFLVNFEGQTITEDLLLDVWRRYDLDGDDKLDINELFAIMQDVSELKSGHRNVPEEAVQWTFRAMDPKNQGYINRDMFVRQGLKYGINVWWG 566
BLAST of mRNA_H-elongata_contig56441.13091.1 vs. uniprot
Match: A0A7J6S2V1_PEROL (Lactation elevated protein 1 n=1 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6S2V1_PEROL) HSP 1 Score: 112 bits (279), Expect = 2.670e-27 Identity = 65/172 (37.79%), Postives = 95/172 (55.23%), Query Frame = 1
Query: 1 QVRRFITLVDVLYERGVKLVCLAQAPCSELLDPGPGNRADMP-DEVFSFGRTASRLAEMQGEDYLKRRVLETAEGRRNWRSTENYLVQFTAEQLSDQELYKIWEAYDVNGDGKMDREELSFLMEDLSEAKNGHRNVSTEALDMTFEAMDVKKEGYISKKTFMTFGRRFGLII 513
QVRRFITL+D LYE G KLVC A+A L +++ DEVF++ RT SRL EMQ +YL + S + L Q+ LS +++ +W YD + G +D EL+ L+EDL+E GHRNV E + + + +D+ K G I + F + +++GL I
Sbjct: 67 QVRRFITLIDGLYEAGTKLVCSAEADPGALFSISEEDKSSSAFDEVFAWDRTVSRLMEMQSGEYLSEHARKL--------SADQMLGQYELNNLSKEDMDDLWFRYDRDDSGSIDVSELTLLLEDLTEHVEGHRNVPAEVVIASMDFLDLDKNGVIDRNEFDQYCQKYGLAI 230
BLAST of mRNA_H-elongata_contig56441.13091.1 vs. uniprot
Match: A0A7J6T1F0_PEROL (Lactation elevated protein 1 (Fragment) n=1 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6T1F0_PEROL) HSP 1 Score: 112 bits (279), Expect = 3.770e-26 Identity = 65/172 (37.79%), Postives = 95/172 (55.23%), Query Frame = 1
Query: 1 QVRRFITLVDVLYERGVKLVCLAQAPCSELLDPGPGNRADMP-DEVFSFGRTASRLAEMQGEDYLKRRVLETAEGRRNWRSTENYLVQFTAEQLSDQELYKIWEAYDVNGDGKMDREELSFLMEDLSEAKNGHRNVSTEALDMTFEAMDVKKEGYISKKTFMTFGRRFGLII 513
QVRRFITL+D LYE G KLVC A+A L +++ DEVF++ RT SRL EMQ +YL + S + L Q+ LS +++ +W YD + G +D EL+ L+EDL+E GHRNV E + + + +D+ K G I + F + +++GL I
Sbjct: 213 QVRRFITLIDGLYEAGTKLVCSAEAEPGALFSISEEDKSSSAFDEVFAWDRTVSRLMEMQSGEYLSEHARKL--------SADQMLGQYELNNLSKEDMDDLWFRYDRDDSGSIDVSELTLLLEDLTEHVEGHRNVPAEVVIASMDFLDLDKNGVIDRNEFDQYCQKYGLAI 376
BLAST of mRNA_H-elongata_contig56441.13091.1 vs. uniprot
Match: A0A7S0QMZ4_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QMZ4_9CRYP) HSP 1 Score: 106 bits (264), Expect = 3.120e-25 Identity = 65/173 (37.57%), Postives = 90/173 (52.02%), Query Frame = 1
Query: 1 QVRRFITLVDVLYERGVKLVCLAQAPCSELLDPGPGNRADMPDEVFSFGRTASRLAEMQGEDYLKRRVLETAEGRRNWRSTENYLVQFTAEQLSDQELYKIWEAYDVNGDGKMDREELSFLMEDLSEAKNGHRNVSTEALDMTFEAMDVKKEGYISKKTFMTFGRRFGLIIWW 519
+VRR ITL+DVLY+ VKL+C A A EL +R DE F+F RTASRL +M ++Y + A E L + E ++ IW YD NG G ++ E+ L+EDL AK GHRNVS E + +D ++G+I K F +F R G +W+
Sbjct: 63 EVRRMITLIDVLYDHHVKLLCSAAAEPFELFK---ADRGASQDEAFAFDRTASRLMDMMSDEYKAKPHRPPA--------PELGLPELQVELITKDHSDLIWNRYDSNGTGFLEVAEIRLLLEDLRYAKQGHRNVSDETVQEAMRLLDADQDGHIRKDEFDSFVERTGYSVWY 224
BLAST of mRNA_H-elongata_contig56441.13091.1 vs. uniprot
Match: A0A7J6MBC6_PERCH (Lactation elevated protein 1 n=1 Tax=Perkinsus chesapeaki TaxID=330153 RepID=A0A7J6MBC6_PERCH) HSP 1 Score: 110 bits (276), Expect = 4.890e-25 Identity = 66/172 (38.37%), Postives = 94/172 (54.65%), Query Frame = 1
Query: 1 QVRRFITLVDVLYERGVKLVCLAQAPCSELLDPGPGNRADMP-DEVFSFGRTASRLAEMQGEDYLKRRVLETAEGRRNWRSTENYLVQFTAEQLSDQELYKIWEAYDVNGDGKMDREELSFLMEDLSEAKNGHRNVSTEALDMTFEAMDVKKEGYISKKTFMTFGRRFGLII 513
QVRRFITL+D LYE G KLVC A A L +RA+ DEVF++ RT SRL EMQ +YL + S + L Q+ LS +++ +W YD + G +D EL+ L+EDL+E GHR+V E + + + +D+ K G I + F + ++GL I
Sbjct: 210 QVRRFITLIDGLYEAGTKLVCSAAAEPGALFSITDEDRANSAFDEVFAWDRTVSRLMEMQSGEYLSEHARKL--------SADEMLGQYELSNLSKEDMDDLWFRYDRDDSGSIDASELALLLEDLTEHVEGHRHVPAEVVVASMDFLDLDKNGVIDRSEFDHYCEKYGLAI 373
BLAST of mRNA_H-elongata_contig56441.13091.1 vs. uniprot
Match: A0A7S0NDH6_9CRYP (Hypothetical protein n=2 Tax=Geminigeraceae TaxID=589343 RepID=A0A7S0NDH6_9CRYP) HSP 1 Score: 110 bits (275), Expect = 5.230e-25 Identity = 63/173 (36.42%), Postives = 97/173 (56.07%), Query Frame = 1
Query: 1 QVRRFITLVDVLYERGVKLVCLAQAPCSELLDPGPGNRADMPDEVFSFGRTASRLAEMQGEDYLKRRVLETAEGRRNWRSTENYLVQFTAEQLSDQELYKIWEAYDVNGDGKMDREELSFLMEDLSEAKNGHRNVSTEALDMTFEAMDVKKEGYISKKTFMTFGRRFGLIIWW 519
+VRR ITL+D+LY+ VKL+C A A +L +++ M DE F+F RTASR+ +M ++Y+ + + L + E ++++EL +IW YD + GK+ + EL LMED+S K GHRNV L+ F ++D +G+I K FM F R G +W+
Sbjct: 377 EVRRLITLIDILYDHKVKLICSAAAEPFKLFR---ADKSAMQDEAFAFDRTASRIQDMMSQEYMIKMHNPSVSSIGEDIDVCPGLAELHHE-VTEEELQEIWMRYDKDASGKLSKSELRTLMEDVSLIKKGHRNVRDVVLEEAFTSLDADGDGFIDKHEFMNFAARSGFNVWY 545
BLAST of mRNA_H-elongata_contig56441.13091.1 vs. uniprot
Match: A0A812SXX9_SYMPI (Calmodulin n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812SXX9_SYMPI) HSP 1 Score: 103 bits (256), Expect = 1.430e-24 Identity = 63/177 (35.59%), Postives = 93/177 (52.54%), Query Frame = 1
Query: 1 QVRRFITLVDVLYERGVKLVCLAQAPCSELLDPGP-------GNRADMPDEVFSFGRTASRLAEMQGEDYLKRRVLETAEGRRNWRSTENYLVQFTAEQLSDQELYKIWEAYDVNGDGKMDREELSFLMEDLSEAKNGHRNVSTEALDMTFEAMDVKKEGYISKKTFMTFGRRFGLI 510
QVRRFITL+D LYE K+VC A+ LDP P + + DE+F++ RT SRL EMQ YL S E +L Q+ + L+D++ ++W YD + G +D +EL +EDL E + GHRN+S E ++ EA+D +G +S + F + + I
Sbjct: 6 QVRRFITLIDSLYECHTKVVCTAE------LDPIPLFYVSEEERKTSIADEIFAWDRTVSRLMEMQSTAYLSAASQSL--------SGEQFLGQYRLKSLTDEDFKEMWRRYDQDDSGHLDMDELRLFLEDLLEKQCGHRNLSDELFEICREAIDANADGEVSFEEFQNYLSDYSTI 168
BLAST of mRNA_H-elongata_contig56441.13091.1 vs. uniprot
Match: A0A8J5XKK8_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XKK8_DIALT) HSP 1 Score: 108 bits (271), Expect = 1.820e-24 Identity = 72/178 (40.45%), Postives = 91/178 (51.12%), Query Frame = 1
Query: 7 RRFITLVDVLYERGVKLVCLAQAPCSELLDPGPGNRADMPDEVFSFGRTASRLAEMQGEDYLKRRVLETAEGRRNWRSTENYLVQFTAEQLSDQELYKIWEAYDVNGDGKMDREELSFLMEDLSEAKNGHRNVSTEALDMTFEAMDVKKEGYISKKTFMTF--GRRFGLII--WWGEN 528
RRFITL+D LYER VKLV A AP EL GP + DE F+F R ASRL EMQ DYL + + + E L+ L ++ K+W+ YDV+GDG + EL LMEDL E +GHRNV E L +D G I ++ F + GR G + W G
Sbjct: 368 RRFITLIDALYERRVKLVVTAAAPPDELYTAGPNSS----DEAFAFDRAASRLNEMQSRDYLTAATRQAS--LTHGVEREAALLFEQRRGLQKAQVQKLWDRYDVDGDGVIGAPELLLLMEDLRERASGHRNVLPEELKSMMARLDRDGSGTIEEREFFDYFEGRSMGKVARRWLGRE 539
BLAST of mRNA_H-elongata_contig56441.13091.1 vs. uniprot
Match: A0A7S2B6P1_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B6P1_9STRA) HSP 1 Score: 99.4 bits (246), Expect = 1.460e-23 Identity = 50/131 (38.17%), Postives = 80/131 (61.07%), Query Frame = 1
Query: 127 DEVFSFGRTASRLAEMQGEDYLKRRVLETAEGRRNWRSTENYLVQFTAEQLSDQELYKIWEAYDVNGDGKMDREELSFLMEDLSEAKNGHRNVSTEALDMTFEAMDVKKEGYISKKTFMTFGRRFGLIIWW 519
DE+F+F RT SRL EMQ +YL R + G S E+ TA L+D +L ++W+AYDV+ G ++ E L+ED+ E ++GHRNV + ++ ++D ++G+I ++ FM +GRR G ++WW
Sbjct: 10 DELFAFDRTISRLMEMQSVEYLSRSKDDHVIGSDLLSSLEH-----TA--LNDDDLRRVWDAYDVDSSGVLELNETRALLEDIQELRSGHRNVPEQTVNAIVGSLDTNQDGFIDREEFMVYGRRLGTMVWW 133 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig56441.13091.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig56441.13091.1 >prot_H-elongata_contig56441.13091.1 ID=prot_H-elongata_contig56441.13091.1|Name=mRNA_H-elongata_contig56441.13091.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=177bp QVRRFITLVDVLYERGVKLVCLAQAPCSELLDPGPGNRADMPDEVFSFGRback to top mRNA from alignment at H-elongata_contig56441:2193..3750- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig56441.13091.1 ID=mRNA_H-elongata_contig56441.13091.1|Name=mRNA_H-elongata_contig56441.13091.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1558bp|location=Sequence derived from alignment at H-elongata_contig56441:2193..3750- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig56441:2193..3750- >mRNA_H-elongata_contig56441.13091.1 ID=mRNA_H-elongata_contig56441.13091.1|Name=mRNA_H-elongata_contig56441.13091.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1062bp|location=Sequence derived from alignment at H-elongata_contig56441:2193..3750- (Himanthalia elongata Himel1 dioecious)back to top |