mRNA_H-elongata_contig56422.13087.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig56422.13087.1 vs. uniprot
Match: D7FNM0_ECTSI (Tetrahydrofolate synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNM0_ECTSI) HSP 1 Score: 262 bits (670), Expect = 4.270e-80 Identity = 147/245 (60.00%), Postives = 172/245 (70.20%), Query Frame = 1
Query: 1 MAGTSGLRPQGSDNVG-KSFEEAKSTLYGTISASGPALEAASKRRKSTVHAMTGYLQRLKLDVSGLSVIHVTGTKGKGSTCTLADS-------STGLFTSPHLLEVTERVRVNGKPLSKEAFAKYFFEVWDRLQATRGGKRVI------------ASGLTA-----------------ESRVDAPADMPTFFHLITLVGLWCFVKEGVDVCVIEVGMGGRFDATNVLPMPVVCGVTMLDLDHTQV 624
MAG G G D G ++FE+AKSTLYGTISA+G ALE ASKRR+STV ++ YL R++LD+SGLSVIHVTGTKGKGSTC + +S TGL+TSPHLLEVTERVR +GKPL+KEAFA+YFF+VWDRLQ T +G+TA E AP +MPT+FHL+TLVGLWCFV+EGVDVCV+EVGMGGRFDATNV+P PV CGV MLDLDHTQV
Sbjct: 1 MAGVHGA---GGDATGLRTFEDAKSTLYGTISAAGAALEKASKRRESTVTSVAAYLDRIQLDLSGLSVIHVTGTKGKGSTCAMVESILRHHGFRTGLYTSPHLLEVTERVRCDGKPLTKEAFARYFFQVWDRLQDTAAPTNTDDATAAATXXXXGTTGITAAASEGPSQAEQGPAAPEEEGTTAP-EMPTYFHLLTLVGLWCFVQEGVDVCVLEVGMGGRFDATNVVPSPVACGVAMLDLDHTQV 241
BLAST of mRNA_H-elongata_contig56422.13087.1 vs. uniprot
Match: A0A835ZAG6_9STRA (Tetrahydrofolate synthase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAG6_9STRA) HSP 1 Score: 190 bits (483), Expect = 1.260e-55 Identity = 105/194 (54.12%), Postives = 134/194 (69.07%), Query Frame = 1
Query: 100 GPALEAASKRRKSTVHAMTGYL--QRLKLDVSGLSVIHVTGTKGKGSTCTLADS-------STGLFTSPHLLEVTERVRVNGKPLSKEAFAKYFFEVWDRLQATRGGKRVIASGLTAESRVDAP--ADMPTFFHLITLVGLWCFVKEG---VDVCVIEVGMGGRFDATNVLPMPVVCGVTMLDLDHTQVVVLTL 639
G ALEAA+ +RK TV AM YL RL LD+SGL V+HVTGTKGKGSTC +S +TGLFTSPHL ++TER+RV G+P+S++AF+ Y +EVW++L+AT ES V+ A MPTFF L+TL+GLW FV E VD ++EVG+GGR+DATNV+P P+ CGVT LD DHT ++ TL
Sbjct: 25 GAALEAAAAQRKQTVEAMHHYLGPTRLNLDISGLKVVHVTGTKGKGSTCCFVESILQHYGVATGLFTSPHLQKMTERIRVGGRPISEQAFSTYTYEVWEKLKAT-------------ESAVEGTGHARMPTFFRLLTLIGLWTFVHERHLLVDTVILEVGIGGRYDATNVVPPPIACGVTTLDYDHTAILGATL 205
BLAST of mRNA_H-elongata_contig56422.13087.1 vs. uniprot
Match: A0A6H5L5N3_9PHAE (Tetrahydrofolate synthase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5N3_9PHAE) HSP 1 Score: 172 bits (437), Expect = 1.860e-47 Identity = 92/150 (61.33%), Postives = 103/150 (68.67%), Query Frame = 1
Query: 259 TGLFTSPHLLEVTERVRVNGKPLSKEAFAKYFFEVWDRLQ--------------------------ATRGGKRVIASGLTA--ESRVDAPADMPTFFHLITLVGLWCFVKEGVDVCVIEVGMGGRFDATNVLPMPVVCGVTMLDLDHTQV 624
TGL+TSPHLLEVTERVR +GKPL+KEAFA+YFF+VWDRLQ A G G TA E AP +MPT+FHL+TLVGLWCFV+EGVDVCV+EVGMGGRFDATNV+P PV CGV MLDLDHTQV
Sbjct: 13 TGLYTSPHLLEVTERVRCDGKPLTKEAFARYFFQVWDRLQDPAARTNTDDATAAAVAATGTTGITAAASEGPSQAKQGPTAPEEEGTTAP-EMPTYFHLLTLVGLWCFVQEGVDVCVLEVGMGGRFDATNVVPSPVACGVAMLDLDHTQV 161
BLAST of mRNA_H-elongata_contig56422.13087.1 vs. uniprot
Match: A0A1V9Z8Y6_9STRA (Folylpolyglutamate synthase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z8Y6_9STRA) HSP 1 Score: 166 bits (419), Expect = 4.010e-45 Identity = 92/200 (46.00%), Postives = 120/200 (60.00%), Query Frame = 1
Query: 49 KSFEEAKSTLYGTISASGPALEAASK-RRKSTVHAMTGYLQRLKLDVSGLSVIHVTGTKGKGSTCTLADS-------STGLFTSPHLLEVTERVRVNGKPLSKEAFAKYFFEVWDRLQATRGGKRVIASGLTAESRVDAPADMPTFFHLITLVGLWCFVKEGVDVCVIEVGMGGRFDATNVLPMPVVCGVTMLDLDHTQV 624
+ + A L G S G L +K R+ST+ M Y+QRL +D+SGLSVIH+ GTKGKGST +S TG+FTSPHL+ V ER R+NGKP+S+ F ++F+ VWD L AT+ + + M FF TL+ L F E VDV ++EVG+GGR DATNV+ PVVCG+T LDLDHT+V
Sbjct: 16 RGVDGAMDLLLGLPSRPGNVLPPTAKDTRESTIKLMKQYMQRLNMDISGLSVIHIAGTKGKGSTTAFTESILRAHGARTGMFTSPHLIHVCERFRINGKPISEALFLEHFWAVWDGLYATK-------------DQANGEPPMAGFFRFFTLLALRVFAAEAVDVVILEVGLGGRLDATNVVERPVVCGITTLDLDHTRV 202
BLAST of mRNA_H-elongata_contig56422.13087.1 vs. uniprot
Match: A0A024UQV9_9STRA (Tetrahydrofolate synthase n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UQV9_9STRA) HSP 1 Score: 162 bits (411), Expect = 6.540e-44 Identity = 87/181 (48.07%), Postives = 112/181 (61.88%), Query Frame = 1
Query: 103 PALEAASKRRKSTVHAMTGYLQRLKLDVSGLSVIHVTGTKGKGSTCTLADS-------STGLFTSPHLLEVTERVRVNGKPLSKEAFAKYFFEVWDRLQATRGGKRVIASGLTAESRVDAPADMPTFFHLITLVGLWCFVKEGVDVCVIEVGMGGRFDATNVLPMPVVCGVTMLDLDHTQV 624
P+ R+ V M YL+RL +D S LS++HV GTKGKGSTC +S TG+FTSPHL+ TER R+NGKP+S+ F F+ +WD L AT T+E+ + P M FF TL+ L F +EGVDV ++EVG+GGR DATNV+ PVVCG+T LDLDHT+V
Sbjct: 40 PSYTGPGDSRELAVEMMESYLKRLHMDTSRLSIVHVAGTKGKGSTCAFTESILRAHGAKTGMFTSPHLIHSTERFRINGKPISEALFLSNFWAIWDGLTAT-----------TSEAGIFPP--MANFFRFFTLMALRMFQEEGVDVVILEVGLGGRLDATNVIKHPVVCGITTLDLDHTRV 207
BLAST of mRNA_H-elongata_contig56422.13087.1 vs. uniprot
Match: A0A067D399_SAPPC (Tetrahydrofolate synthase n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067D399_SAPPC) HSP 1 Score: 162 bits (410), Expect = 8.300e-44 Identity = 85/172 (49.42%), Postives = 111/172 (64.53%), Query Frame = 1
Query: 130 RKSTVHAMTGYLQRLKLDVSGLSVIHVTGTKGKGSTCTLADS-------STGLFTSPHLLEVTERVRVNGKPLSKEAFAKYFFEVWDRLQATRGGKRVIASGLTAESRVDAPADMPTFFHLITLVGLWCFVKEGVDVCVIEVGMGGRFDATNVLPMPVVCGVTMLDLDHTQV 624
R+ST+ M Y++RL++D++ LSVIH+ GTKGKGST +S TG+FTSPHL+ V ER R+NGKP+++ F +F+ VWD L AT+ + D P M FF TL+ L F E VDV ++EVG+GGR DATNV+P PVVCGVT LDLDHT+V
Sbjct: 44 RESTIQIMQHYMRRLRMDITDLSVIHIAGTKGKGSTTAFTESILRAHGVRTGMFTSPHLIHVCERFRINGKPIAEATFLTHFWAVWDGLYATK------------DQATDEPP-MAGFFRFFTLLALRIFAAEAVDVVILEVGLGGRLDATNVVPHPVVCGVTTLDLDHTRV 202
BLAST of mRNA_H-elongata_contig56422.13087.1 vs. uniprot
Match: A0A6G0XFF3_9STRA (Tetrahydrofolate synthase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XFF3_9STRA) HSP 1 Score: 160 bits (405), Expect = 4.780e-43 Identity = 86/175 (49.14%), Postives = 110/175 (62.86%), Query Frame = 1
Query: 121 SKRRKSTVHAMTGYLQRLKLDVSGLSVIHVTGTKGKGSTCTLADS-------STGLFTSPHLLEVTERVRVNGKPLSKEAFAKYFFEVWDRLQATRGGKRVIASGLTAESRVDAPADMPTFFHLITLVGLWCFVKEGVDVCVIEVGMGGRFDATNVLPMPVVCGVTMLDLDHTQV 624
S R+ + M YL+RL++D+SGLS+IHV GTKGKGSTC +S TG+FTSPHL+ ER R+NGKP+S E F F+ VWD L AT E++ P + FF TL+ L F +E VDV ++EVG+GGR DATNV+ PVVCG+T LDLDHT+V
Sbjct: 45 SDSREVAIEMMVSYLKRLRMDISGLSIIHVAGTKGKGSTCAFTESILRAHGAKTGMFTSPHLIHPNERFRINGKPISDEIFLTNFWAVWDGLSATMN-----------EAQGFPP--IANFFRFFTLMALRMFQEERVDVVILEVGLGGRLDATNVVEKPVVCGITTLDLDHTRV 206
BLAST of mRNA_H-elongata_contig56422.13087.1 vs. uniprot
Match: A0A367IN47_RHIAZ (Tetrahydrofolate synthase (Fragment) n=1 Tax=Rhizopus azygosporus TaxID=86630 RepID=A0A367IN47_RHIAZ) HSP 1 Score: 152 bits (384), Expect = 9.520e-43 Identity = 82/189 (43.39%), Postives = 116/189 (61.38%), Query Frame = 1
Query: 112 EAASKRRKSTVHAMTGYLQRLKL---DVSGLSVIHVTGTKGKGSTCTLADS---------STGLFTSPHLLEVTERVRVNGKPLSKEAFAKYFFEVWDRLQATRGGKRVIASGLTAESRVDA------PADMPTFFHLITLVGLWCFVKEGVDVCVIEVGMGGRFDATNVLPMPVVCGVTMLDLDHTQV 624
+A + + ++ M Y +R+ D L++IHVTGTKGKGSTC L S TGLFTSPHL+ V ER+R+NGKP+S+E FAKYF +VWDRL+AT+ + + A L + + D P +F +TLV F++E VD ++EVG+GG +D+TN++ P+VCG+T L LDH V
Sbjct: 11 KAGPRMNERSLPEMREYFKRIGYEPQDFDKLNLIHVTGTKGKGSTCALVQSVLHNYDPSIKTGLFTSPHLVAVRERIRINGKPISEELFAKYFHDVWDRLEATKE-EAIRAMDLPEADKREMIKNTRQHPDKPVYFRYLTLVAFHTFMQEKVDCAILEVGVGGEYDSTNIIEKPIVCGITALGLDHVSV 198
BLAST of mRNA_H-elongata_contig56422.13087.1 vs. uniprot
Match: A0A397FHP4_9STRA (Tetrahydrofolate synthase n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397FHP4_9STRA) HSP 1 Score: 157 bits (398), Expect = 3.910e-42 Identity = 84/181 (46.41%), Postives = 108/181 (59.67%), Query Frame = 1
Query: 103 PALEAASKRRKSTVHAMTGYLQRLKLDVSGLSVIHVTGTKGKGSTCTLADS-------STGLFTSPHLLEVTERVRVNGKPLSKEAFAKYFFEVWDRLQATRGGKRVIASGLTAESRVDAPADMPTFFHLITLVGLWCFVKEGVDVCVIEVGMGGRFDATNVLPMPVVCGVTMLDLDHTQV 624
P+ R+ V M YL RL++D+S LS++HV GTKGKGSTC +S TG+FTSPHL+ TER R+NGKP+S+ F F+ VWD L AT T ++ + FF TL+ L F E VDV ++EVG+GGR DATNV+ PVVCG+T LDLDHT+V
Sbjct: 37 PSYTGVGDSREVAVEMMESYLTRLQMDISRLSIVHVAGTKGKGSTCAFTNSILRAHGVKTGMFTSPHLIHPTERFRINGKPISEALFLANFWAVWDGLSAT-----------TVRAKAGIYPPIANFFRFFTLMALRLFQAEHVDVVILEVGLGGRLDATNVVKNPVVCGITTLDLDHTRV 206
BLAST of mRNA_H-elongata_contig56422.13087.1 vs. uniprot
Match: A0A367J5F2_RHIST (Folylpolyglutamate synthase n=1 Tax=Rhizopus stolonifer TaxID=4846 RepID=A0A367J5F2_RHIST) HSP 1 Score: 157 bits (397), Expect = 5.460e-42 Identity = 82/175 (46.86%), Postives = 115/175 (65.71%), Query Frame = 1
Query: 127 RRKSTVHAMTGYLQRLKL---DVSGLSVIHVTGTKGKGSTCTLADSSTGLFTSPHLLEVTERVRVNGKPLSKEAFAKYFFEVWDRLQATRGGKRVIASGLTAESRVDA------PADMPTFFHLITLVGLWCFVKEGVDVCVIEVGMGGRFDATNVLPMPVVCGVTMLDLDHTQV 624
+++ ++ M +L R+ D L++IHVTGTKGKGST L TGLFTSPHL+ V ER+R+NGKP+S+E FAKYF EVWDRL+AT+ + + + + + + +A D P +F +TLV L FV+E VD ++EVG+GG D+TN++ PVVCG+T L LDH V
Sbjct: 35 KKQDSLTRMKKFLDRIGYIPKDFDKLNLIHVTGTKGKGSTSALTHIKTGLFTSPHLVAVRERIRINGKPISEELFAKYFQEVWDRLEATK--EETLFTDIPRDKKQEAIQLLRLHPDKPAYFRYLTLVALHAFVQEKVDCAILEVGVGGENDSTNIIERPVVCGITALGLDHISV 207 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig56422.13087.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig56422.13087.1 >prot_H-elongata_contig56422.13087.1 ID=prot_H-elongata_contig56422.13087.1|Name=mRNA_H-elongata_contig56422.13087.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=213bp MAGTSGLRPQGSDNVGKSFEEAKSTLYGTISASGPALEAASKRRKSTVHAback to top mRNA from alignment at H-elongata_contig56422:1389..3599+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig56422.13087.1 ID=mRNA_H-elongata_contig56422.13087.1|Name=mRNA_H-elongata_contig56422.13087.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2211bp|location=Sequence derived from alignment at H-elongata_contig56422:1389..3599+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig56422:1389..3599+ >mRNA_H-elongata_contig56422.13087.1 ID=mRNA_H-elongata_contig56422.13087.1|Name=mRNA_H-elongata_contig56422.13087.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1278bp|location=Sequence derived from alignment at H-elongata_contig56422:1389..3599+ (Himanthalia elongata Himel1 dioecious)back to top |