mRNA_H-elongata_contig56130.13056.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig56130.13056.1 vs. uniprot
Match: D8LD26_ECTSI (Flagellar outer dynein arm-docking complex n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD26_ECTSI) HSP 1 Score: 292 bits (748), Expect = 1.270e-93 Identity = 159/183 (86.89%), Postives = 172/183 (93.99%), Query Frame = 1
Query: 1 REVIKSIQHGNELLKCDLAFEARESRFITNPSAAAEMQRLQDQADVYAKKTEQDRRKIQDLDRQIAATQGKVLEQRHKMGGLRASQENNEMISKQIRMLENRLDKAVVKFNESLAHNKILREKIDTLRRERVVFDTIYKKMERELHEKKKEMAAIINDSSNAYHARDKAQSELMALRQQVTVD 549
+E IKSI+HGNELLK DLA+EARESRFITNPSAAAE+QRLQDQAD+YAKKTEQDRRKIQDLDRQIAATQ +VLEQR KMGGL ASQENNEMI+KQIR LENRLDKA+VKFNESLA NK LRE+IDTLRRERVVFD+IYKK+ERELHEKKKEMAAIINDS+NAYHARDKAQSE+MALRQQ D
Sbjct: 24 KEAIKSIRHGNELLKSDLAWEARESRFITNPSAAAEIQRLQDQADIYAKKTEQDRRKIQDLDRQIAATQSRVLEQRQKMGGLNASQENNEMIAKQIRTLENRLDKALVKFNESLAMNKNLRERIDTLRRERVVFDSIYKKLERELHEKKKEMAAIINDSNNAYHARDKAQSEMMALRQQAEKD 206
BLAST of mRNA_H-elongata_contig56130.13056.1 vs. uniprot
Match: A0A835YL73_9STRA (Flagellar outer dynein arm-docking complex n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL73_9STRA) HSP 1 Score: 236 bits (603), Expect = 3.450e-72 Identity = 126/181 (69.61%), Postives = 155/181 (85.64%), Query Frame = 1
Query: 7 VIKSIQHGNELLKCDLAFEARESRFITNPSAAAEMQRLQDQADVYAKKTEQDRRKIQDLDRQIAATQGKVLEQRHKMGGLRASQENNEMISKQIRMLENRLDKAVVKFNESLAHNKILREKIDTLRRERVVFDTIYKKMERELHEKKKEMAAIINDSSNAYHARDKAQSELMALRQQVTVD 549
+I+++Q NE +K DLA E+RESRF+TNP+A + RLQDQAD+YAKK E +RRKI+ LD+QIA TQ +VLEQR KMGGL AS+ENN+MI++QI +LENRLDKA+VKFNESLA+NK LRE+ID +RRERVVFD IYKK+ERELHE+KKEMAAII DS+NAY ARDK+Q E++ALRQQ D
Sbjct: 20 MIETVQQSNEQMKTDLARESRESRFVTNPAAMKSIVRLQDQADLYAKKIEAERRKIEALDKQIAVTQARVLEQRQKMGGLNASEENNQMIARQINILENRLDKALVKFNESLAYNKTLRERIDAMRRERVVFDGIYKKLERELHERKKEMAAIIEDSNNAYRARDKSQGEMIALRQQAEKD 200
BLAST of mRNA_H-elongata_contig56130.13056.1 vs. uniprot
Match: A0A7S2CC35_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CC35_9STRA) HSP 1 Score: 199 bits (507), Expect = 5.780e-61 Identity = 112/180 (62.22%), Postives = 140/180 (77.78%), Query Frame = 1
Query: 1 REVIKSIQHGNELLKCDLAFEARESRFITNPSAAAEMQRLQDQADVYAKKTEQDRRKIQDLDRQIAATQGKVLEQRHKMGGLRASQENNEMISKQIRMLENRLDKAVVKFNESLAHNKILREKIDTLRRERVVFDTIYKKMERELHEKKKEMAAIINDSSNAYHARDKAQSELMALRQQV 540
R I I+ NE LK LA E+R SR N S ++E+ +LQD+A++Y K+ E +R+KI +LD IA Q ++EQR KMGG+ AS+EN+EMISKQIR+ ENRLDKA+VKFNESLA NK LRE+ID LR+ERVVFD IYKK+ERELHEKKKEMAAII DS NAY RDK+Q+E++ L+QQ
Sbjct: 15 RAAIDKIKVDNEALKQRLARESRFSRLSQNMSTSSEIMKLQDEANMYLKRIETERKKIAELDSSIAEHQSTIIEQRRKMGGINASKENHEMISKQIRLFENRLDKALVKFNESLAKNKQLREQIDNLRKERVVFDGIYKKLERELHEKKKEMAAIIEDSKNAYQLRDKSQNEMLVLKQQA 194
BLAST of mRNA_H-elongata_contig56130.13056.1 vs. uniprot
Match: F0XWP0_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XWP0_AURAN) HSP 1 Score: 194 bits (493), Expect = 2.180e-56 Identity = 112/182 (61.54%), Postives = 141/182 (77.47%), Query Frame = 1
Query: 1 REVIKSIQHGNELLKCDLAFEARESRF--ITNPSAAAEMQRLQDQADVYAKKTEQDRRKIQDLDRQIAATQGKVLEQRHKMGGLRASQENNEMISKQIRMLENRLDKAVVKFNESLAHNKILREKIDTLRRERVVFDTIYKKMERELHEKKKEMAAIINDSSNAYHARDKAQSELMALRQQV 540
R I+ IQ NE LK DLA E+R+SR + N + E+QRLQ +AD+Y +K E +RRKI+ LD +IA Q ++EQR KMGG+ AS+EN++MISKQIR+LENRLDKA+ KFNESLA NK LRE+ID LR+ERVVFD IYKK+E++LHEKKKEMAAII DS AY D+A E++AL+QQV
Sbjct: 13 RAAIEKIQGENEALKQDLARESRQSRLTQVMNSNQGGEVQRLQMEADMYLRKIEGERRKIEQLDYKIAMAQRTIIEQRQKMGGINASKENHDMISKQIRILENRLDKALQKFNESLAMNKQLREQIDNLRKERVVFDGIYKKLEKDLHEKKKEMAAIIEDSKVAYQRSDRAMGEMVALKQQV 194
BLAST of mRNA_H-elongata_contig56130.13056.1 vs. uniprot
Match: A0A482S1B7_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S1B7_9ARCH) HSP 1 Score: 187 bits (475), Expect = 1.610e-53 Identity = 99/178 (55.62%), Postives = 140/178 (78.65%), Query Frame = 1
Query: 1 REVIKSIQHGNELLKCDLAFEARESRFITNPSAAAEMQRLQDQADVYAKKTEQDRRKIQDLDRQIAATQGKVLEQRHKMGGLRASQENNEMISKQIRMLENRLDKAVVKFNESLAHNKILREKIDTLRRERVVFDTIYKKMERELHEKKKEMAAIINDSSNAYHARDKAQSELMALRQ 534
RE+++S++H NE+L+ DL E R+++ + AA+++ RLQ++A + KK E +R KI +LD+QI Q +L+Q+ ++GG+ A+Q NN++I KQI++L+NRLDK + KFNE++AHNK LR KID RRER+VFD IYKK+ER+LHEKKKEM AIINDS NAY ARDK+QSE+ AL+Q
Sbjct: 22 RELVESMKHENEVLRLDLTREERDAKHSQSAGAASDIARLQEEAGRFMKKIEGEREKIAELDKQIIKYQELILDQKTRLGGVNAAQINNQLIQKQIKVLDNRLDKCLTKFNETIAHNKELRLKIDEYRRERIVFDVIYKKLERDLHEKKKEMTAIINDSKNAYQARDKSQSEMAALQQ 199
BLAST of mRNA_H-elongata_contig56130.13056.1 vs. uniprot
Match: A0A7S2ALL2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2ALL2_9STRA) HSP 1 Score: 176 bits (445), Expect = 1.810e-52 Identity = 98/170 (57.65%), Postives = 131/170 (77.06%), Query Frame = 1
Query: 40 LKCDLAFEARESRFITNPSAAAEMQRLQDQADVYAKKTEQDRRKIQDLDRQIAATQGKVLEQRHKMGGLRASQENNEMISKQIRMLENRLDKAVVKFNESLAHNKILREKIDTLRRERVVFDTIYKKMERELHEKKKEMAAIINDSSNAYHARDKAQSELMALRQQVTVD 549
+K LA E+R SR N S + E+ +LQD A+ Y KK E +RRKIQ+ D +IA + +++QR K GG+ AS+EN+EM++KQIR+ ENRLDKA+VKFNESLA NK +RE++D LRRERVVFD IYKK+ERELHEKKKEM AII DS +AY RDK+Q++++ L+Q+ +
Sbjct: 1 MKQRLARESRFSRLAQNMSTSTEVMKLQDDANNYLKKIETERRKIQEADAKIAEYEVILVDQRRKTGGINASKENHEMLTKQIRLYENRLDKALVKFNESLAKNKQMREQVDNLRRERVVFDGIYKKLERELHEKKKEMMAIIEDSQHAYELRDKSQNQMLMLKQRAETE 170
BLAST of mRNA_H-elongata_contig56130.13056.1 vs. uniprot
Match: A0A7S0SDG4_9CHLO (Hypothetical protein n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0SDG4_9CHLO) HSP 1 Score: 178 bits (451), Expect = 9.640e-50 Identity = 94/180 (52.22%), Postives = 135/180 (75.00%), Query Frame = 1
Query: 1 REVIKSIQHGNELLKCDLAFEARESRFITNPSAAAEMQRLQDQADVYAKKTEQDRRKIQDLDRQIAATQGKVLEQRHKMGGLRASQENNEMISKQIRMLENRLDKAVVKFNESLAHNKILREKIDTLRRERVVFDTIYKKMERELHEKKKEMAAIINDSSNAYHARDKAQSELMALRQQV 540
R+ I+ ++ N LK +LA E +++ P+ AE+ +LQD AD+Y +K E +RR+++DLD + + K+LEQR MGG+ A++EN+ ++KQ+++LEN+LDKA+V+FNE+L+ NK LRE+ID LRRERV FD +Y+KMERELHEKKKEMA II S+ AY ARD+AQ+E+ ALR Q
Sbjct: 45 RQAIEKLKEDNASLKTELAMELKDAALAPPPNVQAEITKLQDTADLYTRKIEIERRRVEDLDHHLQLSDLKILEQRRAMGGIHAAKENSHQVTKQVKVLENKLDKALVQFNEALSSNKSLREEIDNLRRERVAFDNVYRKMERELHEKKKEMANIIEISNIAYEARDQAQNEIAALRAQA 224
BLAST of mRNA_H-elongata_contig56130.13056.1 vs. uniprot
Match: A0A7S4FCZ6_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4FCZ6_CHRCT) HSP 1 Score: 175 bits (443), Expect = 1.880e-48 Identity = 97/180 (53.89%), Postives = 136/180 (75.56%), Query Frame = 1
Query: 1 REVIKSIQHGNELLKCDLAFEARESRFITNPSAAAEMQRLQDQADVYAKKTEQDRRKIQDLDRQIAATQGKVLEQRHKMGGLRASQENNEMISKQIRMLENRLDKAVVKFNESLAHNKILREKIDTLRRERVVFDTIYKKMERELHEKKKEMAAIINDSSNAYHARDKAQSELMALRQQV 540
RE I+ +++ N LK +LA E + ++ + SA A++ +LQD D Y KK EQ++R+I++LD+Q+ K+ EQR KMGG+ AS+EN++ I+KQI +LENRLDKA+ K+NE+LA NK LRE ID LRRER+VFD IYKK+E+EL +KKKEMA II+ S+ AY ARD AQ+E++AL+ Q
Sbjct: 51 RETIEKLKNDNLQLKEELASERKHAKLFDSVSAQAQIAKLQDAGDTYTKKIEQEKRRIEELDKQMDIMHKKIWEQRKKMGGVNASRENSQAITKQIHVLENRLDKALKKYNEALAQNKKLRENIDNLRRERLVFDQIYKKLEKELADKKKEMARIIDISNRAYEARDNAQAEMVALKTQA 230
BLAST of mRNA_H-elongata_contig56130.13056.1 vs. uniprot
Match: A0A0M0JE40_9EUKA (Flagellar outer dynein arm-docking complex protein 1 n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JE40_9EUKA) HSP 1 Score: 174 bits (440), Expect = 3.540e-48 Identity = 96/180 (53.33%), Postives = 134/180 (74.44%), Query Frame = 1
Query: 1 REVIKSIQHGNELLKCDLAFEARESRFITNPSAAAEMQRLQDQADVYAKKTEQDRRKIQDLDRQIAATQGKVLEQRHKMGGLRASQENNEMISKQIRMLENRLDKAVVKFNESLAHNKILREKIDTLRRERVVFDTIYKKMERELHEKKKEMAAIINDSSNAYHARDKAQSELMALRQQV 540
R I ++ NE LK +L+ E R ++ + SA A++ +LQD D+Y +K E ++R+IQ+LD+Q+ K+ +QR KMGG+ AS+ENN+ I+KQI++LENRLDKA+ ++NE+LA+NK LRE ID LRRER+V+D IYKK+E+EL EKKKEMA II S+ AY ARD AQSE+ AL+ Q
Sbjct: 33 RATIDKLKDDNEQLKEELSLERRHAKVYDSVSAQAQIAKLQDTGDMYTRKIELEKRRIQELDKQMEVMHKKIWDQRQKMGGINASRENNQAIAKQIQILENRLDKALKRYNEALANNKRLRENIDNLRRERLVYDQIYKKLEKELAEKKKEMARIIEISNKAYEARDAAQSEMQALKAQA 212
BLAST of mRNA_H-elongata_contig56130.13056.1 vs. uniprot
Match: A0A2R5GGQ1_9STRA (Coiled-coil domain-containing protein 63 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GGQ1_9STRA) HSP 1 Score: 166 bits (421), Expect = 3.350e-45 Identity = 86/180 (47.78%), Postives = 131/180 (72.78%), Query Frame = 1
Query: 1 REVIKSIQHGNELLKCDLAFEARESRFITNPSAAAEMQRLQDQADVYAKKTEQDRRKIQDLDRQIAATQGKVLEQRHKMGGLRASQENNEMISKQIRMLENRLDKAVVKFNESLAHNKILREKIDTLRRERVVFDTIYKKMERELHEKKKEMAAIINDSSNAYHARDKAQSELMALRQQV 540
++ I+ + N+ L +LA E+++ + N +A+AE++RLQDQ D Y +K E +RR+I +L++QI Q KV QR KMGG S++NN++++KQIR+LENRLDKA V++NE L NK+++EKID LRRERV+FD IYKK+E+E+H +KKEMA ++ + + AY RD+ + E+ L+ Q
Sbjct: 57 KKAIERLTLDNQKLVQELALESKQDNMVNNSAASAEIRRLQDQGDAYTRKIELERRRIAELEKQITIVQDKVHAQRKKMGGANVSKQNNQVLAKQIRVLENRLDKATVRYNEILGKNKLIKEKIDDLRRERVIFDGIYKKLEKEMHSEKKEMARLVQECNRAYMERDEVKQEISKLKVQA 236 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig56130.13056.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig56130.13056.1 >prot_H-elongata_contig56130.13056.1 ID=prot_H-elongata_contig56130.13056.1|Name=mRNA_H-elongata_contig56130.13056.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=192bp REVIKSIQHGNELLKCDLAFEARESRFITNPSAAAEMQRLQDQADVYAKKback to top mRNA from alignment at H-elongata_contig56130:365..2988- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig56130.13056.1 ID=mRNA_H-elongata_contig56130.13056.1|Name=mRNA_H-elongata_contig56130.13056.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2624bp|location=Sequence derived from alignment at H-elongata_contig56130:365..2988- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig56130:365..2988- >mRNA_H-elongata_contig56130.13056.1 ID=mRNA_H-elongata_contig56130.13056.1|Name=mRNA_H-elongata_contig56130.13056.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1152bp|location=Sequence derived from alignment at H-elongata_contig56130:365..2988- (Himanthalia elongata Himel1 dioecious)back to top |