mRNA_H-elongata_contig56119.13052.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig56119.13052.1
Unique NamemRNA_H-elongata_contig56119.13052.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig56119.13052.1 vs. uniprot
Match: A0A6H5JPR7_9PHAE (JmjC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPR7_9PHAE)

HSP 1 Score: 273 bits (699), Expect = 8.100e-84
Identity = 130/163 (79.75%), Postives = 144/163 (88.34%), Query Frame = 1 
Query:    1 DWQKFQKLLASKTFTAHDTQRIRGEDLTAEWAQETGFREPVIAPDKAGTGLMVPDASFTVADVARIVGEEEQIRPIHVGEQANLDQSMSLAEFAEYFETCTKPGQAILNMISLEFSDTPLAELVQSPKLVRDMDWINRCWPDSRKRFGQFPKVICDCLCVHGG 489
            DW KF+KLLASKTF  HDT+RIRGEDLTAEWA E+GFREPVIAPDK G GL VPD+SFTVADVAR+VGE++ IRPIHVGEQA +DQSM+LAEFAEYFETCTKPGQAILNMISLEFSDTPLA++VQSP+LVRDMDW+NRCWP  R + GQFPKV   CL   GG
Sbjct:   47 DWHKFKKLLASKTFAVHDTKRIRGEDLTAEWAAESGFREPVIAPDKGGMGLKVPDSSFTVADVARVVGEDKAIRPIHVGEQAIIDQSMTLAEFAEYFETCTKPGQAILNMISLEFSDTPLAKMVQSPQLVRDMDWLNRCWPADRLQEGQFPKVQYYCLMSQGG 209
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BLAST of mRNA_H-elongata_contig56119.13052.1 vs. uniprot
Match: D7FTJ5_ECTSI (JmjC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTJ5_ECTSI)

HSP 1 Score: 273 bits (697), Expect = 2.350e-83
Identity = 129/163 (79.14%), Postives = 144/163 (88.34%), Query Frame = 1 
Query:    1 DWQKFQKLLASKTFTAHDTQRIRGEDLTAEWAQETGFREPVIAPDKAGTGLMVPDASFTVADVARIVGEEEQIRPIHVGEQANLDQSMSLAEFAEYFETCTKPGQAILNMISLEFSDTPLAELVQSPKLVRDMDWINRCWPDSRKRFGQFPKVICDCLCVHGG 489
            DW KF+KLLASKTF  HDT+RIRGEDLTAEWA E GFREPVIAPDK G GL VPD+SFTVADVAR+VGE++ IRPIHVGEQAN+DQSM+LAEFAEYFETCTKPGQAILNMISLEFSD+PLA++VQSP+LVRDMDW++RCWP  R + GQFPKV   CL   GG
Sbjct:   56 DWHKFKKLLASKTFAVHDTKRIRGEDLTAEWAAENGFREPVIAPDKGGMGLEVPDSSFTVADVARVVGEDKAIRPIHVGEQANIDQSMTLAEFAEYFETCTKPGQAILNMISLEFSDSPLAKMVQSPQLVRDMDWLHRCWPADRLQEGQFPKVQYYCLMSQGG 218
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BLAST of mRNA_H-elongata_contig56119.13052.1 vs. uniprot
Match: A0A835Z0K8_9STRA (JmjC domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0K8_9STRA)

HSP 1 Score: 153 bits (387), Expect = 3.540e-40
Identity = 86/160 (53.75%), Postives = 107/160 (66.88%), Query Frame = 1 
Query:    1 DWQKFQKLLASKTFTAHDTQRIRGEDLTAEWAQETGFREPVIAPDKAGTGLMVPDAS-FTVADVARIVGEEEQIRPIHVGEQANLDQSMSLAEFAEYFETCTKPGQAILNMISLEFSDTPLAELVQSPKLVRDMDWINRCWP-DSRKRFGQFPKVICDCL 474
            D  KFQ LL SK FT  + Q++RGE+LTAEWA +TG REPV+  DK G GL VPDAS FTV DVA IVGE+  +  I V  Q+ L     L ++AEY+ET  K  Q  LN+ISLEFS TPL + V SPK+VR +DWI+  WP + R+  G +P+V   CL
Sbjct:   35 DRNKFQHLLESKRFTPLEVQQLRGEELTAEWAYKTGLREPVMVRDKTGLGLQVPDASTFTVRDVADIVGEDFPVSVIEVCSQSELP-GWRLGDWAEYYET-RKAEQPPLNVISLEFSQTPLRKFVTSPKMVRSLDWIDAVWPAEDRREGGTYPQVQYYCL 192
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BLAST of mRNA_H-elongata_contig56119.13052.1 vs. uniprot
Match: A0A507E5S3_9FUNG ([Histone H3]-dimethyl-L-lysine(36) demethylase n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507E5S3_9FUNG)

HSP 1 Score: 132 bits (331), Expect = 1.280e-32
Identity = 65/155 (41.94%), Postives = 94/155 (60.65%), Query Frame = 1 
Query:   10 KFQKLLASKTFTAHDTQRIRGEDLTAEWAQETGFREPVIAPDKAGTGLMVPDASFTVADVARIVGEEEQIRPIHVGEQANLDQSMSLAEFAEYFETCTKPGQAILNMISLEFSDTPLAELVQSPKLVRDMDWINRCWPDSRKRFGQFPKVICDCL 474
            +F K+L ++ F     QR++GEDLT EWA++ G REPVI     G  + +PD    V  VA I G   Q+  I V  Q+  ++ M+L E+A+YF    +  + ILN+ISLE S TPLAE ++ P+LVRD+DW +  WP  +K   ++P+V   CL
Sbjct:   55 RFTKILQARKFAQESFQRLKGEDLTLEWARKDGLREPVIIESPEGLDIQMPDKRLIVDQVANICGRTRQVDAIEVSTQS--ERMMTLDEWAKYFHQPPEKRKRILNVISLEISQTPLAEQIRRPRLVRDLDWTDNVWPRDKKLANEYPRVQLYCL 207
[Close]
BLAST of mRNA_H-elongata_contig56119.13052.1 vs. uniprot
Match: A0A0L0HKN2_SPIPD (JmjC domain-containing histone demethylation protein 1 n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HKN2_SPIPD)

HSP 1 Score: 122 bits (306), Expect = 3.070e-29
Identity = 59/155 (38.06%), Postives = 94/155 (60.65%), Query Frame = 1 
Query:   10 KFQKLLASKTFTAHDTQRIRGEDLTAEWAQETGFREPVIAPDKAGTGLMVPDASFTVADVARIVGEEEQIRPIHVGEQANLDQSMSLAEFAEYFETCTKPGQAILNMISLEFSDTPLAELVQSPKLVRDMDWINRCWPDSRKRFGQFPKVICDCL 474
            +F KLL +++F     QR++G D+T +WA+ TG +EP++     G  + +PD S  V  VA + G E ++  I V  Q+  ++ M+L E+A+YF    +  + ILN+ISLE S TPL + ++ P+LVR++DWI+  WP   K    +P+V   CL
Sbjct:  127 RFTKLLRARSFAPDRFQRLQGRDVTLDWARTTGLKEPIVIESPEGLDMCMPDKSLIVNQVADLCGREREVDVIEVATQS--ERIMTLDEWAKYFHQPPEKRKRILNVISLEISQTPLGDQIKRPRLVRELDWIDNVWPVDLKAKDDYPRVQLYCL 279
[Close]
BLAST of mRNA_H-elongata_contig56119.13052.1 vs. uniprot
Match: F0YBT4_AURAN (JmjC domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YBT4_AURAN)

HSP 1 Score: 116 bits (291), Expect = 3.620e-29
Identity = 61/140 (43.57%), Postives = 87/140 (62.14%), Query Frame = 1 
Query:   70 GEDLTAEWAQETGFREPVIAPDKAGTGLMVPDASFTVADVARIVGEEEQIRPIHVGEQANLDQSMSLAEFAEYFETCTKPGQAILNMISLEFSDTPLAELVQSPKLVRDMDWINRCWPDSRKRFGQFPKVICDCLCVHGG 489
            G      WA+ TG R P +  D AG GL VP  SF V DVARIVGE   ++ +   +Q++++ + SLA++A Y+    +  +  LN+ISLEFS TPLA  V+SP LVR +DWI+ C+PD+ +  G++P+    CL   GG
Sbjct:    4 GRGFDEAWARRTGLRRPALIADAAGLGLAVPSGSFGVRDVARIVGERTPVQVMRSQDQSSVE-NWSLADWARYWHAPVR--EDTLNVISLEFSRTPLAAHVRSPALVRRLDWIDNCFPDAYRARGEYPQTQYYCLMSTGG 140
[Close]
BLAST of mRNA_H-elongata_contig56119.13052.1 vs. uniprot
Match: UPI0019041404 (uncharacterized protein n=1 Tax=Cantharellus anzutake TaxID=1750568 RepID=UPI0019041404)

HSP 1 Score: 122 bits (305), Expect = 4.150e-29
Identity = 62/160 (38.75%), Postives = 99/160 (61.88%), Query Frame = 1 
Query:    1 DWQKFQKLLASKTFTAHDTQRIRGEDLTAEWAQET--GFREPVIAPDKAGTGLMVPDASFTVADVARIVGEEEQIRPIHVGEQANLDQSMSLAEFAEYFETCTKPGQAILNMISLEFSDTPLAELVQSPKLVRDMDWINRCWPDSRKRFGQFPKVICDCL 474
            D +++   LA+K    H    ++G ++T+ W  E      +P+I  +  G G+ +PD SFTV+DVAR+VGE+E++  + VG Q   D+  +L ++A+Y+ +  +    I N+ISLE S+T LAE +  P+LVR +DW+ + WP + KR GQ+PKV   CL
Sbjct:  132 DPKRWMHYLATKRIVPHAFPTMKGSEVTSAWLTENEDAMTQPIIIEEPEGLGMKMPDPSFTVSDVARMVGEDEKVEVLDVGTQRE-DKGWTLGKWADYYNSPPRDRDKIRNVISLEISETKLAEKILPPRLVRQIDWVEQAWPVN-KRKGQYPKVQLYCL 289
[Close]
BLAST of mRNA_H-elongata_contig56119.13052.1 vs. uniprot
Match: UPI0004416E58 (jumonji protein n=1 Tax=Punctularia strigosozonata (strain HHB-11173) TaxID=741275 RepID=UPI0004416E58)

HSP 1 Score: 119 bits (299), Expect = 2.260e-28
Identity = 62/161 (38.51%), Postives = 97/161 (60.25%), Query Frame = 1 
Query:    1 DWQKFQKLLASKTFTAHDTQRIRGEDLTAEWAQ--ETGFREPVIAPDKAGTGLMVPDASFTVADVARIVGEEEQIRPIHVGEQANLDQSMSLAEFAEYFETCTKPGQAILNMISLEFSDTPLAELVQSPKLVRDMDWINRCWPDSRKRFGQ-FPKVICDCL 474
            D  ++ K+   K  +  + +R++G ++T EW +  +   + P++  D  G G+ +PD+SFTV+DVA IVGE+  +  I V  QAN     +L ++AEY+ T  +    I N+ISLE S T LA+ V  P+LVR++DW+ + WP +RK  G  +PKV   CL
Sbjct:  143 DATRWTKMFEGKKISPDNFRRMQGSEVTMEWLEGDDAALKTPIVIEDPEGLGMKMPDSSFTVSDVASIVGEQTPVEVIDVASQAN-SPGWTLGKWAEYYNTPPEKRDKIRNVISLEISGTSLADQVLPPRLVRELDWVEKFWPANRKGKGHAYPKVQLYCL 302
[Close]
BLAST of mRNA_H-elongata_contig56119.13052.1 vs. uniprot
Match: A0A0C3Q626_9AGAM (JmjC domain-containing histone demethylation protein 1 n=1 Tax=Tulasnella calospora MUT 4182 TaxID=1051891 RepID=A0A0C3Q626_9AGAM)

HSP 1 Score: 118 bits (296), Expect = 6.030e-28
Identity = 63/168 (37.50%), Postives = 95/168 (56.55%), Query Frame = 1 
Query:   10 KFQKLLASKTFTAHDTQRIRGEDLTAEWAQE--TGFREPVIAPDKAGTGLMVP-----------DASFTVADVARIVGEEEQIRPIHVGEQANLDQSMSLAEFAEYFETCTKPGQAILNMISLEFSDTPLAELVQSPKLVRDMDWINRCWPDSRKRFGQFPKVICDCL 474
            K+ K++ +K       +R++GE+++ +W  E  T FREP++  D  G G+ +P              F V DVA++VGEE  +  I V  Q+N     +LA +AEY+         I N+ISLE + TP+AE++  P+LV+D+DW  R WP +R+  GQFPKV   CL
Sbjct:  130 KWTKMIENKPLAPDRFKRMKGEEVSVKWMNEDETAFREPIVIEDARGLGMRMPCWPSEDGVGGATVPFDVRDVAQVVGEETPVEVIDVATQSN-SPGWNLARWAEYYHKPEAERDKIRNVISLEVTGTPMAEMITPPRLVQDIDWFQRYWPLNRRSKGQFPKVQLYCL 296
[Close]
BLAST of mRNA_H-elongata_contig56119.13052.1 vs. uniprot
Match: A0A197JK65_9FUNG (JmjC domain-containing histone demethylation protein 1 n=1 Tax=Linnemannia elongata AG-77 TaxID=1314771 RepID=A0A197JK65_9FUNG)

HSP 1 Score: 118 bits (295), Expect = 9.180e-28
Identity = 68/160 (42.50%), Postives = 98/160 (61.25%), Query Frame = 1 
Query:   10 KFQKLLASKTFTAHDTQRIRGEDLTAEWAQETGFREPVIAP-DKAGT----GLMVPDASFTVADVARIVGEEEQIRPIHVGEQANLDQSMSLAEFAEYFETCTKPGQAILNMISLEFSDTPLAELVQSPKLVRDMDWINRCWPDSRKRFGQFPKVICDCL 474
            K++ +L S  F A   +RI+GEDLT +W + TGF+EPVI   DK GT     + +P+A+ TV DV   VG +  +  I V  Q+      ++A +A+YF+T  +P   + N+ISLE + TPLA+ VQ PK+VR++DWI   WP+   R  +FPKV   CL
Sbjct:   89 KWRVVLDSHQFQADKFERIQGEDLTLDWLRATGFKEPVIVKRDKDGTTDGLSMKMPEATLTVDDVRDYVGADTPVEVIDVATQSE-QADWNMASWADYFKT--EPKDRVYNVISLEITGTPLADKVQRPKVVRELDWIENFWPEEL-RPTEFPKVQLYCL 244
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig56119.13052.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JPR7_9PHAE8.100e-8479.75JmjC domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7FTJ5_ECTSI2.350e-8379.14JmjC domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A835Z0K8_9STRA3.540e-4053.75JmjC domain-containing protein n=1 Tax=Tribonema m... [more]
A0A507E5S3_9FUNG1.280e-3241.94[Histone H3]-dimethyl-L-lysine(36) demethylase n=1... [more]
A0A0L0HKN2_SPIPD3.070e-2938.06JmjC domain-containing histone demethylation prote... [more]
F0YBT4_AURAN3.620e-2943.57JmjC domain-containing protein (Fragment) n=1 Tax=... [more]
UPI00190414044.150e-2938.75uncharacterized protein n=1 Tax=Cantharellus anzut... [more]
UPI0004416E582.260e-2838.51jumonji protein n=1 Tax=Punctularia strigosozonata... [more]
A0A0C3Q626_9AGAM6.030e-2837.50JmjC domain-containing histone demethylation prote... [more]
A0A197JK65_9FUNG9.180e-2842.50JmjC domain-containing histone demethylation prote... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig56119contigH-elongata_contig56119:56..3505 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score275.4
Seed ortholog evalue1.7e-71
Seed eggNOG ortholog2880.D7FTJ5
Preferred nameJHD1
KEGG rclassRC00185,RC03038
KEGG koko:K10276,ko:K11445
KEGG ReactionR10056
GOsGO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006325,GO:0006355,GO:0006357,GO:0006464,GO:0006482,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0008214,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016043,GO:0016491,GO:0016569,GO:0016570,GO:0016577,GO:0016705,GO:0016706,GO:0019219,GO:0019222,GO:0019538,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032451,GO:0032452,GO:0032784,GO:0032786,GO:0032968,GO:0034243,GO:0035064,GO:0036211,GO:0042393,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0045893,GO:0045935,GO:0045944,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051213,GO:0051252,GO:0051254,GO:0051276,GO:0051864,GO:0055114,GO:0060255,GO:0065007,GO:0070076,GO:0070544,GO:0070988,GO:0071704,GO:0071840,GO:0080090,GO:0140030,GO:0140034,GO:0140096,GO:1901564,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141
EggNOG free text desc.demethylase
EggNOG OGsKOG1633@1,KOG1633@2759
EC1.14.11.27
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03036,ko04121
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionJumonji domain protein
Ec32 orthologEc-21_001600.1
Exons4
Model size489
Cds size489
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig56119.13052.1prot_H-elongata_contig56119.13052.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig56119 56..3505 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930914.0758693-CDS-H-elongata_contig56119:55..1971622930914.0758693-CDS-H-elongata_contig56119:55..197Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig56119 56..197 -
1691679622.6354926-CDS-H-elongata_contig56119:55..1971691679622.6354926-CDS-H-elongata_contig56119:55..197Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig56119 56..197 -
1622930914.0988634-CDS-H-elongata_contig56119:1285..13741622930914.0988634-CDS-H-elongata_contig56119:1285..1374Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig56119 1286..1374 -
1691679622.6476834-CDS-H-elongata_contig56119:1285..13741691679622.6476834-CDS-H-elongata_contig56119:1285..1374Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig56119 1286..1374 -
1622930914.1149335-CDS-H-elongata_contig56119:2340..24421622930914.1149335-CDS-H-elongata_contig56119:2340..2442Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig56119 2341..2442 -
1691679622.6563542-CDS-H-elongata_contig56119:2340..24421691679622.6563542-CDS-H-elongata_contig56119:2340..2442Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig56119 2341..2442 -
1622930914.1350617-CDS-H-elongata_contig56119:3349..35051622930914.1350617-CDS-H-elongata_contig56119:3349..3505Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig56119 3350..3505 -
1691679622.6656394-CDS-H-elongata_contig56119:3349..35051691679622.6656394-CDS-H-elongata_contig56119:3349..3505Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig56119 3350..3505 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig56119.13052.1

>prot_H-elongata_contig56119.13052.1 ID=prot_H-elongata_contig56119.13052.1|Name=mRNA_H-elongata_contig56119.13052.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=163bp
DWQKFQKLLASKTFTAHDTQRIRGEDLTAEWAQETGFREPVIAPDKAGTG
LMVPDASFTVADVARIVGEEEQIRPIHVGEQANLDQSMSLAEFAEYFETC
TKPGQAILNMISLEFSDTPLAELVQSPKLVRDMDWINRCWPDSRKRFGQF
PKVICDCLCVHGG
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mRNA from alignment at H-elongata_contig56119:56..3505-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig56119.13052.1 ID=mRNA_H-elongata_contig56119.13052.1|Name=mRNA_H-elongata_contig56119.13052.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3450bp|location=Sequence derived from alignment at H-elongata_contig56119:56..3505- (Himanthalia elongata Himel1 dioecious)
GATTGGCAAAAGTTCCAGAAATTGTTAGCCTCCAAGACTTTCACCGCGCA
CGACACGCAGCGCATCAGGGGAGAGGACCTCACCGCCGAGTGGGCACAAG
AGACCGGCTTCCGAGAGCCTGTCATCGCGCCTGACAAGGCCGGCACGGGG
CTAATGGTAAGCCTGCACCACCTGAGCGTGAACTTGGGCCTGGTGCCTGT
CGAACGGAGACGAGCAAGATCTGCGTGCTGGGTTTTCTCTCTCGTGTTTT
TCTTCGCTCGAAATAAACAATGGCGGAAACTGACGGACACCCGACGACCT
ACCGAGATAGGGAAAACATGACCACAGAAAATTTGGAGCTGTGACGTCGG
CAACAAAACAGCCTCCCCTTCCCCGTAGCTCCTCCGCCTCTTACTCTGTA
CCAGTAGTGTTAATTATCTAGATGCTGCTCTGTTTTATTTGCTGGTTTTC
GATTTTCGCTAGGCATACTCGTGATATACTTATATGCATTTGAGGGGGGG
GGTACTGTTTTTTTTGTAGTGAGCGACACGAAGTCTATACAGAAGCAGGA
CAGCAAGAGGTAATATAATGGGCACAGTAGATGTTGGGCCATTAGCTGAG
TAGGCCAAGGATCCCTGCACGCTATTTTCTCCTCTTCCATGAAGTAGAGC
AAGGGAGGGGCTAGGGCATGTTCCGCGCTGAGCGCAGTGCCCGAGGGTTC
AACGGCATATTAGTAAAAAATATAGATTACCTCGTAGTTTGAAGTATTTT
AACTCGTAGAAGAGTGAAGACCGATATCGCTCTAGAGACAAGAACAGCGC
GAGCAGTAGCAGTTAGTCGCGATGCTGTTTCTCTCTGTAATCCCTCGTCC
TCACCCACCAGAGGCGTTGCCCGCTTTTGCGCCCCATTCAACCGCCTCCC
TCTTTCATGCGATCGAAACCCCATGTACTGTAACTCCTCTTGGTTATCAT
CGGTACGTCGTGGTCGTTGTTGCTGTGGTTGTCGCTGCTGCTGCTGATGT
CGTCTCGATGGCGTCAATGAATGGGGACCATGTATCATACATGCATCTCG
GCCTTGCCTGCAGGTGCCGGACGCTTCATTCACTGTGGCCGATGTGGCTC
GCATCGTGGGGGAAGAGGAGCAGATCCGACCGATTCACGTCGGAGAGCAG
GCCAACCTCGATCAGGTGCAGTACGTTCGGTACCAGCAGTGTCACTGGTT
CTTTCGCTGTCGGCCTCTGTATCGAACACGTCTCTCTCGTCTCTCTCGTC
TTGCCTCACATACCCGAAAAATTACACACTTACACGTGAAACTTTACACG
CCTGACAACTAACTTCACACGTGAAAATTTGCTCAAATTTACACTATACA
CCTACACTTAGCAGTATATACTTTACACTACACACTTAAAACTTGAAGCG
TGGCACGTCGAATCAAATCTTCGGAGCAGACGAGACCTGACCCCAGACCA
GATCGGATCGGTGTCATGTTTCTCAATACGGAGTATATATATATATATAT
ATATTATATGAGTAGACTACGTAGTCTAGATGATTTACGCTCTTGATTGT
TATGTGAGACCAAGGTATACCTTTGCAGTTCGAGGCCCTAATGTCCACAA
GGGCTCGTGGCAGCCCCAGAATCTCATCTCCCCCTGCTAACCATAAGAAG
GAAATTTTCCCAGCACGGCGACGGCTCACAACACATACGACAATCTCAGG
GAATTCCCCCCCCCCCCCCCCCCCCCCCCCCCACACCCACCACAACCTCC
CCCAACTCTCACTATCAAAACTAAACCACAACTCNNNNNNNNNNACCAAC
CGACAAATCCAAGGAAATCCCCCCCCCCCCCCCCCTCCACCCAAAATTAA
TTCTAGATCACTTCAACGTGTTTCTAGAAGAGTTGCACAGTCATGCTACG
ACGGTTCATCCAAATGTGGCTTATATTTCGGGCCAGAGTGATATGAACGT
ATGTATGGTGCATATCTGGCTAGCTCTCCGTCGATAGCGCATGTATATAT
ATATACAGTGTACATGCGTAGTAGGATATATAGAGTGCTATATATATATA
TATATATGTATATGTTTTCATGAGAGTCACCTTGCTTTTGTTTACCTTCC
CCTGCTATGCGCGTGTGATCGCTGGGCACAGAGCATGTCCCTCGCTGAGT
TCGCCGAATACTTCGAGACGTGCACCAAGCCAGGGCAGGCCATCCTTAAC
ATGATCTCCTTGGAGTTCAGGTTCGCTTTTTTCGTTTTCCCTGTACTTGT
TCTTGTTCTTGTTCTTGTTCTTTTTTCTAGATATAAATACGTAAGAAGAT
CTCTGTTGAACGCGATACATTCTCTGAATGGGTCAGCCACGGGATGCAGC
CAGCTTCCTTGACCCCTCAGTGGGAGGGCGGCCCCTGGTGGGGTGTGGAG
TCGAAATCCACGGGCTTTTGCCTGCCATGTTAGACAGCTCCCTGTCTTCC
TTTTCTCGAGAGCGCATTTTTCTTTTAAGGGCGTGACGGTCCTCTCGGGG
ATCGCGGGTCTGTGAGCGTTTTTTTAAGGCATTAGTGTTATACTTGCCGA
TACTAAAAATCAAGTGTTTTCAACGCCTAGGGTTCAATTTTTGGACTGTA
CCCACCATTGCTTCGGTCGGAGAGAGGTGCCCGCCGGACTCTGCGTCGTT
ACACCATCATTATTTTGGTGTTTTATCGTTGCCGCGAGGTTTTGCGTTGG
ACGTCGTTGCTCGAGGTGTATCTATCCACAGAGGCCAGCCAATGCCGATG
TCACTCCCGTGTTCCCTTCTCATCGTCTTAGTCTGTCGTATTGAACTCGT
CGTGGACATCCATGGCTGTAGGCGGAAAATGGGTGGGTGTAGGGGAAGCC
CGACCTGTACAGCAGTCGTCCGGCAGTCGAATCTCGAACGTCGAAAAAGA
GGAAAACATTAAAACAGGGGACTGTAGGAAAAATGCCTGACGATATGTTC
ATCCCCTGAGCTGGACCTCGCACGGTGCTAAAAAGGCGTGGATGTTCGGA
GGGTTGGAATGCGTTCATATGTTTTTAAATAAAAAAACAATAATCTGTTC
CTGTGATTTTTTTTTGTGGGTGGGGGGTTGGGGCTGACTCGAGAGCGCGA
TAGCTCTAGATGGGTTTACATCCAGATATTATTATGTACTAAAGAGGACA
CAGGCAGGGAGGGCAGGGGCCGACGGGCGGGGTGATGAAATTTTTTCAGA
ATTCCCGGGAGGAGATATGATATTTGGTCCCTTAGTCCTGCCCCCCCCCC
CAACGACAGAAACATAACAGAGCGCAACGTCTCTCTCCCCCTCGAATGCG
CCCTCCAGCGACACTCCCTTGGCGGAGCTTGTGCAGTCGCCGAAGCTGGT
GAGAGACATGGACTGGATCAATCGTTGCTGGCCGGACAGCCGTAAACGGT
TTGGGCAGTTCCCCAAGGTGATATGTGATTGCCTGTGCGTTCACGGGGGG
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Coding sequence (CDS) from alignment at H-elongata_contig56119:56..3505-

>mRNA_H-elongata_contig56119.13052.1 ID=mRNA_H-elongata_contig56119.13052.1|Name=mRNA_H-elongata_contig56119.13052.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=978bp|location=Sequence derived from alignment at H-elongata_contig56119:56..3505- (Himanthalia elongata Himel1 dioecious)
GATTGGCAAAAGTTCCAGAAATTGTTAGCCTCCAAGACTTTCACCGCGCA
CGACACGCAGCGCATCAGGGGAGAGGACCTCACCGCCGAGTGGGCACAAG
AGACCGGCTTCCGAGAGCCTGTCATCGCGCCTGACAAGGCCGGCACGGGG
CTAATGGATTGGCAAAAGTTCCAGAAATTGTTAGCCTCCAAGACTTTCAC
CGCGCACGACACGCAGCGCATCAGGGGAGAGGACCTCACCGCCGAGTGGG
CACAAGAGACCGGCTTCCGAGAGCCTGTCATCGCGCCTGACAAGGCCGGC
ACGGGGCTAATGGTGCCGGACGCTTCATTCACTGTGGCCGATGTGGCTCG
CATCGTGGGGGAAGAGGAGCAGATCCGACCGATTCACGTCGGAGAGCAGG
CCAACCTCGATCAGGTGCCGGACGCTTCATTCACTGTGGCCGATGTGGCT
CGCATCGTGGGGGAAGAGGAGCAGATCCGACCGATTCACGTCGGAGAGCA
GGCCAACCTCGATCAGAGCATGTCCCTCGCTGAGTTCGCCGAATACTTCG
AGACGTGCACCAAGCCAGGGCAGGCCATCCTTAACATGATCTCCTTGGAG
TTCAGAGCATGTCCCTCGCTGAGTTCGCCGAATACTTCGAGACGTGCACC
AAGCCAGGGCAGGCCATCCTTAACATGATCTCCTTGGAGTTCAGCGACAC
TCCCTTGGCGGAGCTTGTGCAGTCGCCGAAGCTGGTGAGAGACATGGACT
GGATCAATCGTTGCTGGCCGGACAGCCGTAAACGGTTTGGGCAGTTCCCC
AAGGTGATATGTGATTGCCTGTGCGTTCACGGGGGGCGACACTCCCTTGG
CGGAGCTTGTGCAGTCGCCGAAGCTGGTGAGAGACATGGACTGGATCAAT
CGTTGCTGGCCGGACAGCCGTAAACGGTTTGGGCAGTTCCCCAAGGTGAT
ATGTGATTGCCTGTGCGTTCACGGGGGG
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