mRNA_H-elongata_contig5600.13030.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig5600.13030.1 vs. uniprot
Match: A0A6H5JL23_9PHAE (1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamideisomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JL23_9PHAE) HSP 1 Score: 426 bits (1096), Expect = 1.520e-144 Identity = 215/264 (81.44%), Postives = 236/264 (89.39%), Query Frame = 1
Query: 1 DRKQEQVKQIVGSTLSATGDATAALQTNFETSKSPTDFARTYERDGLAGGHVIMLGKGCEEAALAAIRAFPGGFHVGGGVNPSNAGKFLDAGASHVIVTSYVFKDGDINWERLEELRTAVGRSRRLVLDLSCRRRPGGDKRGDFLVVTDKWQKFTRFAVTRENLERLGDYCDEFLVHGVDAEGKMCGVLEDLVSLLGNYSPRLATYAGGASSIGDLDRVRELGKGRVDLTIGSALDIFGGKLAYSDVVRWQRQEEQDKDKMPLS 792
D + +VKQIVGSTLSATGD T+ L+TNFET+KS DFA+ YERDGL GGHVIMLG GCEEAALAAI+AFPGG HVGGGVNPSNA K+LDAGASHVIVTSYVFKDG+I+WERLEELRT VG+ R LVLDLSCRRRPGG +RGDFLVVT+KWQKFTRFAVTRENLERL YCDEFLVHGVDAEGKMCGVLEDLVSLLG++SPRL TYAGGASS+ DLDRVRELG+GRVDLTIGSALDIFGG L Y DVV WQRQ+E +MP++
Sbjct: 71 DLHEGKVKQIVGSTLSATGDTTSTLETNFETTKSSADFAKMYERDGLRGGHVIMLGGGCEEAALAAIKAFPGGLHVGGGVNPSNAMKYLDAGASHVIVTSYVFKDGEIDWERLEELRTVVGKDR-LVLDLSCRRRPGGLERGDFLVVTNKWQKFTRFAVTRENLERLAGYCDEFLVHGVDAEGKMCGVLEDLVSLLGSFSPRLVTYAGGASSLEDLDRVRELGRGRVDLTIGSALDIFGGDLRYDDVVLWQRQQEA---RMPVA 330
BLAST of mRNA_H-elongata_contig5600.13030.1 vs. uniprot
Match: A0A835YTK8_9STRA (1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamideisomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTK8_9STRA) HSP 1 Score: 327 bits (837), Expect = 1.980e-106 Identity = 164/251 (65.34%), Postives = 196/251 (78.09%), Query Frame = 1
Query: 19 VKQIVGSTLSATGDATAALQTNFETSKSPTDFARTYERDGLAGGHVIMLGKGCEEAALAAIRAFPGGFHVGGGVNPSNAGKFLDAGASHVIVTSYVFKDGDINWERLEELRTAVGRSRRLVLDLSCRRRPGGDKRGDFLVVTDKWQKFTRFAVTRENLERLGDYCDEFLVHGVDAEGKMCGVLEDLVSLLGNYSPRLATYAGGASSIGDLDRVRELGKGRVDLTIGSALDIFGGKLAYSDVVRWQRQEEQD 771
VKQIVGSTLSATG+ T L+TNFETSKS +FA Y +D L GGHVIMLG CEEAA+AA+RA+P G HVGGG+ + A K+++AGASHVIVTSYVFK G I W+RL+EL AVG+ LVLDLSCRRRP G G + VVTDKWQ +T +A+TR+ + RL + CDEFLVHGV+AEGK CG+LEDLV LG +SP TYAGGA +I DLD V++LG GRVDLTIGSALDIFGG L Y VV WQR+++ +
Sbjct: 14 VKQIVGSTLSATGEVTDDLKTNFETSKSSAEFAALYRKDRLPGGHVIMLGPNCEEAAMAALRAYPQGLHVGGGITAATASKYIEAGASHVIVTSYVFKGGQIAWDRLDELVAAVGKEH-LVLDLSCRRRPDGAA-GPYYVVTDKWQAYTDYALTRDGVARLAERCDEFLVHGVEAEGKRCGILEDLVRALGEWSPIPVTYAGGARTIEDLDLVKKLGNGRVDLTIGSALDIFGGDLPYDSVVEWQRRQDAE 262
BLAST of mRNA_H-elongata_contig5600.13030.1 vs. uniprot
Match: A0A4D9CQ28_9STRA (1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamideisomerase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CQ28_9STRA) HSP 1 Score: 303 bits (777), Expect = 1.890e-97 Identity = 153/247 (61.94%), Postives = 187/247 (75.71%), Query Frame = 1
Query: 19 VKQIVGSTLSATGDATAALQTNFETSKSPTDFARTYERDGLAGGHVIMLGKGCEEAALAAIRAFPGGFHVGGGVNPSNAGKFLDAGASHVIVTSYVFKDGDINWERLEELRTAVGRSRRLVLDLSCRRRPGGDKRGDFLVVTDKWQKFTRFAVTRENLERLGDYCDEFLVHGVDAEGKMCGVLEDLVSLLGNYSPRLATYAGGASSIGDLDRVRELGKGRVDLTIGSALDIFGGKLAYSDVVRWQRQ 759
VKQIVGS+L+ + AAL TNFE + S DFA+ Y+ D L GGHVIMLG GCEEAAL A+RA+P G VGGG+ P NA KFL+AGASHVIVTS++F ++W RL+E+ VG+ R LV+DLSCRR+ G + VV DKWQ +T FA+TREN+ RL +CDEFLVHGVD EGK G++EDLV+LLG+ SP TYAGGA SI DL+RV ELGK +VDLTIGSALDIFGG L+Y+DVV W ++
Sbjct: 14 VKQIVGSSLTGSD---AALVTNFEATMSAEDFAKMYKTDDLKGGHVIMLGGGCEEAALKALRAYPQGLQVGGGITPQNAQKFLEAGASHVIVTSFLFNGSTLDWARLKEMEITVGKER-LVVDLSCRRKASDGPEGPYYVVKDKWQTYTDFAITRENVNRLSMHCDEFLVHGVDVEGKQVGIMEDLVTLLGDISPIPVTYAGGARSIEDLERVTELGKNKVDLTIGSALDIFGGALSYTDVVEWDKR 256
BLAST of mRNA_H-elongata_contig5600.13030.1 vs. uniprot
Match: A0A2R5G2D0_9STRA (1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamideisomerase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G2D0_9STRA) HSP 1 Score: 300 bits (768), Expect = 2.280e-95 Identity = 157/262 (59.92%), Postives = 189/262 (72.14%), Query Frame = 1
Query: 19 VKQIVGSTLSATGDATAALQTNFETSKSPTDFARTYERDGLAGGHVIMLGKGCEEAALAAIRAFPGGFHVGGGVNPSNAGKFLDAGASHVIVTSYVFKDGDINWERLEELRTAVGRSRRLVLDLSCRRRPGGDKRGDFLVVTDKWQKFTRFAVTRENLERLGDYCDEFLVHGVDAEGKMCGVLEDLVSLLGNYSPRLATYAGGASSIGDLDRVRELGKGRVDLTIGSALDIFGGKLAYSDVVRWQRQEEQDKDKMPLSVSCP 804
VKQIVG TL T DA +TNF + KS +FA Y+ DGL GGHVIMLGKG EEAAL A+ AFP G HVGGGV P NA K+LDAGASHVIVTSYVF+DG I++++L EL +AVG+ R LVLDLSCRRR + + VVTD+WQKFT + +T+ENLE L +C EFLVHGVD EG G++ +LV +LG +SP TYAGGA S+ DL+ V+ LG+GRVDLTIGSALDIFGG L+Y VV+W D S+S P
Sbjct: 14 VKQIVGGTL--TDDAGKTPETNFTSDKSAGNFAALYQEDGLQGGHVIMLGKGNEEAALEALGAFPDGMHVGGGVTPENAQKYLDAGASHVIVTSYVFRDGTIDFDKLHELESAVGKER-LVLDLSCRRRSNEGESPRYFVVTDRWQKFTDYEITQENLETLAQHCSEFLVHGVDVEGLRVGIIGELVEMLGRWSPIPVTYAGGARSVEDLELVKLLGRGRVDLTIGSALDIFGGSLSYDTVVKWHYANLHGDDVELSSISNP 272
BLAST of mRNA_H-elongata_contig5600.13030.1 vs. uniprot
Match: A0A7S2GCA0_9STRA (1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamideisomerase n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GCA0_9STRA) HSP 1 Score: 296 bits (758), Expect = 3.390e-94 Identity = 155/257 (60.31%), Postives = 186/257 (72.37%), Query Frame = 1
Query: 19 VKQIVGSTLSAT---GDATAA-----LQTNFETSKSPTDFARTYERDGLAGGHVIMLGKGCEEAALAAIRAFPGGFHVGGGVNPSNAGKFLDAGASHVIVTSYVFKDGDINWERLEELRTAVGRSRRLVLDLSCRRRPGGDKRGDFLVVTDKWQKFTRFAVTRENLERLGDYCDEFLVHGVDAEGKMCGVLEDLVSLLGNYSPRLATYAGGASSIGDLDRVRELGKGRVDLTIGSALDIFGGKLAYSDVVRWQRQEE 765
VKQIVGSTL+A GD +AA +Q NF T P+ F Y RD L GGHVIMLG G EEAA+ A+R++PGGFHVGGG+ P NA +FLDAGASHVIVTSYVF+DGD+ W+ L ++ AVG+ R LVLDLSCRR+ + VVTD+WQKFT V E L L ++C EFLVHGVD EG CG+L+DL++LL +SP TYAGGASS+ DLDRV+ +G G+V LTIGSALDIFGG +AY VV WQR EE
Sbjct: 31 VKQIVGSTLTAASENGDNSAASSIDAVQENFVTDSPPSFFGELYMRDALPGGHVIMLGLGNEEAAMEALRSYPGGFHVGGGITPDNASRFLDAGASHVIVTSYVFRDGDLCWDNLGKMVNAVGKDR-LVLDLSCRRKAPDS---GYFVVTDRWQKFTSLEVNSETLTMLSEHCAEFLVHGVDVEGLRCGMLDDLIALLAQHSPLPVTYAGGASSLQDLDRVKSIGLGKVHLTIGSALDIFGGDVAYDSVVAWQRSEE 283
BLAST of mRNA_H-elongata_contig5600.13030.1 vs. uniprot
Match: A0A3D6C7B1_9DELT (5-proFAR isomerase n=1 Tax=Desulfobacteraceae bacterium TaxID=2049433 RepID=A0A3D6C7B1_9DELT) HSP 1 Score: 292 bits (748), Expect = 3.570e-93 Identity = 152/253 (60.08%), Postives = 185/253 (73.12%), Query Frame = 1
Query: 1 DRKQEQVKQIVGSTLSATGDATAALQTNFETSKSPTDFARTYERDGLAGGHVIMLGKGCEEAALAAIRAFPGGFHVGGGVNPSNAGKFLDAGASHVIVTSYVFKDGDINWERLEELRTAVGRSRRLVLDLSCRRRPGGDKRGDFLVVTDKWQKFTRFAVTRENLERLGDYCDEFLVHGVDAEGKMCGVLEDLVSLLGNYSPRLATYAGGASSIGDLDRVRELGKGRVDLTIGSALDIFGGKLAYSDVVRWQRQ 759
D ++ +V QIVG TL T + NFE+ KSP +FA Y++D L GGHVI LG G EAAL+A+RA+PGG +GGG+NP NA +FLD GASHVIVTSYVF G+I+ ++L L VG+ R LVLDLSCR R G F +VTD+WQKFT AVT E++E L +CDEFLVHGVD EGKM G+ EDLV LLG++SP TYAGGAS +LDRV+ELG+ RVDLTIGSALDIFGGK+ Y+DVV W R+
Sbjct: 8 DLREGKVVQIVGGTLRDTDQDNTVV--NFESPKSPAEFAAMYQKDQLTGGHVIALGPGNREAALSALRAYPGGLQMGGGINPDNAAEFLDTGASHVIVTSYVFSGGNIDMDKLNRLVKVVGKER-LVLDLSCRMRDG-----QFWIVTDRWQKFTDQAVTPESIEHLAAFCDEFLVHGVDVEGKMQGIQEDLVVLLGDHSPIPVTYAGGASRFSELDRVKELGRNRVDLTIGSALDIFGGKIPYADVVAWHRE 252
BLAST of mRNA_H-elongata_contig5600.13030.1 vs. uniprot
Match: A0A7S3PKW7_9STRA (1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamideisomerase n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PKW7_9STRA) HSP 1 Score: 291 bits (746), Expect = 7.000e-92 Identity = 150/260 (57.69%), Postives = 191/260 (73.46%), Query Frame = 1
Query: 1 DRKQEQVKQIVGSTLS-ATGDATAALQTNFETSKSPTDFARTYERDGLAGGHVIMLGKGCEEAALAAIRAFPGGFHVGGGVNPSNAGKFLDAGASHVIVTSYVFKDGDINWERLEELRTAVGRSRRLVLDLSCRRRPGGDKRGDFLVVTDKWQKFTRFAVTRENLERLGDYCDEFLVHGVDAEGKMCGVLEDLVSLLGNYSPRLATYAGGASSIGDLDRVRELGKGRVDLTIGSALDIFGGKLAYSDVVRWQRQEEQDKD 777
D + +VKQIVGSTL+ T D L TNFE+ KS +FA Y+ D L GGH+I LG G +EAALAA+ A+PGG VGGG+ P NA K+LDAGASHVIVTSYVF +G I+++RL+EL VG+ R LVLDLSCR +PG D + VVTD+WQK+T ++ ENL++L +YC EFLVHGVD EG G++EDLV LG +SP TYAGGA S+ DL+ V++LGKG+VD+T+GSALDIFGG L+Y VV+W + +D D
Sbjct: 19 DLHRGRVKQIVGSTLTDKTNDEN--LVTNFESEKSSKEFALLYKNDKLRGGHIIKLGPGNDEAALAALEAYPGGMQVGGGIKPDNALKYLDAGASHVIVTSYVFHNGQIDFDRLDELEKVVGKDR-LVLDLSCRSKPGSDS---YFVVTDRWQKYTDLEISPENLQKLANYCVEFLVHGVDVEGMRIGIMEDLVEKLGEWSPIPVTYAGGARSLADLELVKKLGKGKVDITVGSALDIFGGDLSYEKVVQWHDSQHKDSD 272
BLAST of mRNA_H-elongata_contig5600.13030.1 vs. uniprot
Match: A0A7S1DU50_HEMAN (1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamideisomerase n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DU50_HEMAN) HSP 1 Score: 289 bits (740), Expect = 9.420e-92 Identity = 152/249 (61.04%), Postives = 184/249 (73.90%), Query Frame = 1
Query: 19 VKQIVGSTLSATGDATAALQTNFETSKSPTDFARTYERDGLAGGHVIMLGKGCEEAALAAIRAFPGGFHVGGGVNPSNAGKFLDAGASHVIVTSYVFKDGDINWERLEELRTAVGRSRRLVLDLSCRRRPGGDKRGDFLVVTDKWQKFTRFAVTRENLERLGDYCDEFLVHGVDAEGKMCGVLEDLVSLLGNYSPRLATYAGGASSIGDLDRVRELGKGRVDLTIGSALDIFGGKLAYSDVVRWQRQEE 765
VKQIVG TLS D+TAA + NF K + +A Y+ D L GGHVI LG G EEAALAA++A+PGG H+GGGVNP NA KFLDAGASHVIVTSYVFKDG ++W++LEE+ VG+ R LVLDLSCR++ G + VVTD+WQKFT AV E + L C EFLVH VD EGKM G+ +D+V++LG+ TYAGGA+++ DL V+ELGKG+VDLTIGSALDIFGG + YSDVV WQR EE
Sbjct: 26 VKQIVGGTLS--DDSTAAPKENFAADKPSSYYADMYKADKLPGGHVIALGPGNEEAALAALKAYPGGMHMGGGVNPGNAQKFLDAGASHVIVTSYVFKDGKLDWDKLEEVLKVVGKER-LVLDLSCRKKEDGK----YYVVTDRWQKFTDLAVDEETIRSLESKCSEFLVHAVDVEGKMSGIEKDIVAMLGDLVTIPCTYAGGATTMEDLKLVKELGKGKVDLTIGSALDIFGGSVKYSDVVAWQRGEE 267
BLAST of mRNA_H-elongata_contig5600.13030.1 vs. uniprot
Match: A0A2D6ETY4_9DELT (5-proFAR isomerase n=2 Tax=Desulfobacterales TaxID=213118 RepID=A0A2D6ETY4_9DELT) HSP 1 Score: 286 bits (731), Expect = 1.280e-90 Identity = 144/255 (56.47%), Postives = 182/255 (71.37%), Query Frame = 1
Query: 1 DRKQEQVKQIVGSTLSATGDATAALQTNFETSKSPTDFARTYERDGLAGGHVIMLGKGCEEAALAAIRAFPGGFHVGGGVNPSNAGKFLDAGASHVIVTSYVFKDGDINWERLEELRTAVGRSRRLVLDLSCRRRPGGDKRGDFLVVTDKWQKFTRFAVTRENLERLGDYCDEFLVHGVDAEGKMCGVLEDLVSLLGNYSPRLATYAGGASSIGDLDRVRELGKGRVDLTIGSALDIFGGKLAYSDVVRWQRQEE 765
D ++ +V QIVG +L + L+ NFET +S DFA+ Y++D L GGHVI LG G ++A+ +A+RAFPGGFH+GGG+ P+NA +LDAGASHVIVTSY+F DG + RL L +GR R LVLDLSCRRR DF VVTD+WQ+FT V R+ L +L DYCDEFLVHGVD EGKM G+ DLV +LG ++P TYAGG + DLDRV++LG+GRVDLTIGSA+DIFGG + Y +V WQR +
Sbjct: 8 DLRKGRVVQIVGGSLQ--DGSLDVLKINFETERSAEDFAQMYKKDDLPGGHVISLGPGNQDASFSALRAFPGGFHMGGGITPANAMDYLDAGASHVIVTSYIFSDGHVEKNRLRSLVKTIGRDR-LVLDLSCRRRGS-----DFWVVTDRWQRFTDVPVNRDTLFQLADYCDEFLVHGVDVEGKMQGIQPDLVEILGKHAPVPVTYAGGVKDLSDLDRVKDLGRGRVDLTIGSAMDIFGGNIPYRSIVEWQRSNQ 254
BLAST of mRNA_H-elongata_contig5600.13030.1 vs. uniprot
Match: A0A7S0AX87_9STRA (1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamideisomerase n=2 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AX87_9STRA) HSP 1 Score: 286 bits (732), Expect = 1.450e-90 Identity = 153/256 (59.77%), Postives = 183/256 (71.48%), Query Frame = 1
Query: 16 QVKQIVGSTLS--ATGDATAA-----LQTNFETSKSPTDFARTYERDGLAGGHVIMLGKGCEEAALAAIRAFPGGFHVGGGVNPSNAGKFLDAGASHVIVTSYVFKDGDINWERLEELRTAVGRSRRLVLDLSCRRRPGGDKRGDFLVVTDKWQKFTRFAVTRENLERLGDYCDEFLVHGVDAEGKMCGVLEDLVSLLGNYSPRLATYAGGASSIGDLDRVRELGKGRVDLTIGSALDIFGGKLAYSDVVRWQRQE 762
QVKQIVGSTL+ A GD L TNF T + + +A Y RD L GGHVIMLG G +AA +A++A+ GG VGGGVN SNA ++LDAGASHVIVTSYVF +G I+ RL L ++G+ R LVLDLSCRR+PG D G + VVTD+WQ +T V L LG YCDEFLVHGV+ EGK CG+LEDLV LLG +SP TYAGG I DLDRV+ELGKG+VDLTIGSALD FGG+++Y DVV W ++E
Sbjct: 13 QVKQIVGSTLTDEAGGDGATKKPDDDLATNFSTDRPASSYAEMYLRDKLTGGHVIMLGPGNVDAAKSALKAYRGGLQVGGGVNTSNAREWLDAGASHVIVTSYVFHNGQIDMGRLRSLVDSIGKDR-LVLDLSCRRKPG-DSTGSYYVVTDRWQNYTDVEVDAATLVDLGRYCDEFLVHGVENEGKRCGILEDLVELLGKHSPIPVTYAGGVKDISDLDRVKELGKGKVDLTIGSALDCFGGRISYDDVVAWHQKE 266 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5600.13030.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig5600.13030.1 >prot_H-elongata_contig5600.13030.1 ID=prot_H-elongata_contig5600.13030.1|Name=mRNA_H-elongata_contig5600.13030.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=219bp MLGKGCEEAALAAIRAFPGGFHVGGGVNPSNAGKFLDAGASHVIVTSYVFback to top mRNA from alignment at H-elongata_contig5600:1036..6745- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig5600.13030.1 ID=mRNA_H-elongata_contig5600.13030.1|Name=mRNA_H-elongata_contig5600.13030.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=5710bp|location=Sequence derived from alignment at H-elongata_contig5600:1036..6745- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig5600:1036..6745- >mRNA_H-elongata_contig5600.13030.1 ID=mRNA_H-elongata_contig5600.13030.1|Name=mRNA_H-elongata_contig5600.13030.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1314bp|location=Sequence derived from alignment at H-elongata_contig5600:1036..6745- (Himanthalia elongata Himel1 dioecious)back to top |