mRNA_H-elongata_contig55947.13022.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig55947.13022.1 vs. uniprot
Match: D8LTJ5_ECTSI (HDc domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTJ5_ECTSI) HSP 1 Score: 292 bits (747), Expect = 2.260e-93 Identity = 142/183 (77.60%), Postives = 154/183 (84.15%), Query Frame = 1
Query: 1 QDPLYGSLVLEPVIQRLMDTPQFQRLHGLKQLGASDFVYRSCTHTRFEHSVGVAHLAHRFAEGLRRRQPELGISAADVMCVKIAGLLHDLGHGPFSHMWDDEFVRRMGFKWRHEIGSVNMLRFMLTDNK------IDLCSFEPPLYARDVTFIEEMILGTPDNKRTGRGVEKEFLYDIVNNTR 531
+D LYG+L LEPVIQ LMDTPQFQRLHGLKQLG SD V+RSCTHTRFEHSVGVAHLA RFAEGLRRRQPELGI+AADVMCVKIAGLLHDLGHGPFSHMWDD FV+RMG KW HE GSVNM+R+ML IDL + P L A+DVTFIEEMILGTP+ +R GR +KEFLYDIVNNTR
Sbjct: 86 KDSLYGTLELEPVIQLLMDTPQFQRLHGLKQLGTSDNVFRSCTHTRFEHSVGVAHLAQRFAEGLRRRQPELGITAADVMCVKIAGLLHDLGHGPFSHMWDDAFVKRMGVKWEHETGSVNMMRYMLRGGDGGPAKAIDLGRYRPALDAKDVTFIEEMILGTPEEQRKGRSSDKEFLYDIVNNTR 268
BLAST of mRNA_H-elongata_contig55947.13022.1 vs. uniprot
Match: A0A835YQ16_9STRA (HDc domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ16_9STRA) HSP 1 Score: 214 bits (545), Expect = 4.830e-64 Identity = 99/174 (56.90%), Postives = 127/174 (72.99%), Query Frame = 1
Query: 13 YGSLVLEPVIQRLMDTPQFQRLHGLKQLGASDFVYRSCTHTRFEHSVGVAHLAHRFAEGLRRRQPELGISAADVMCVKIAGLLHDLGHGPFSHMWDDEFVRRMGFKWRHEIGSVNMLRFMLTDNKIDLCSFEPPLYARDVTFIEEMILGT-PDNKRTGRGVEKEFLYDIVNNTR 531
+GSL LEP + +M+TPQF RLHGL QLG S +V+R THTRF HSVGVAHLA + R QP L I+ D++CV+IAGL HDLGHGP+SH+WD+ F++RMG W+HE GS++MLRF+L DN IDL + L RD+ FIEE+I+G P+ + GR +K FLYD+VNN R
Sbjct: 9 HGSLQLEPALVEIMNTPQFNRLHGLAQLGTSSYVFRDATHTRFAHSVGVAHLAEKMVTNFMRYQPYLNITKEDLLCVQIAGLCHDLGHGPYSHIWDNNFMKRMGIDWKHEQGSIDMLRFLLRDNNIDLRKYG--LQERDLVFIEELIMGVGPEKREGGRDSKKGFLYDVVNNVR 180
BLAST of mRNA_H-elongata_contig55947.13022.1 vs. uniprot
Match: A0A7S2RPY7_9STRA (Hypothetical protein (Fragment) n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RPY7_9STRA) HSP 1 Score: 197 bits (501), Expect = 6.980e-57 Identity = 104/182 (57.14%), Postives = 124/182 (68.13%), Query Frame = 1
Query: 1 QDPLYGSLVLEPVIQRLMDTPQFQRLHGLKQLGASDFVYRSCTHTRFEHSVGVAHLAHRFAEGLRRRQPELGISAADVMCVKIAGLLHDLGHGPFSHMWDDEFVRRMGFKWRHEIGSVNMLRFMLTDNKIDLC-SFEPPLYARDVTFIEEMILGTPD----NKRTGRGVEKEFLYDIVNNTR 531
QDP++ + P + LMDTPQFQRL GLKQLGAS V+ THTRF+HS+GVAHL F + L+ RQPELGI DV+CV IAGL HDLGHGPFSH++D F+ + +W HE GS M R+ML DNKIDL FE D+ FIEE+ILG N R GRG EK+FLYDI+NN R
Sbjct: 63 QDPIHEFMEFHPSLVALMDTPQFQRLRGLKQLGASHLVFPGATHTRFDHSLGVAHLGMTFVKQLKARQPELGIDDVDVLCVGIAGLCHDLGHGPFSHLFDGTFLSK-NKEWTHERGSALMFRYMLEDNKIDLKRDFE--FNDLDLVFIEELILGKKIPGGVNARKGRGHEKQFLYDIINNER 241
BLAST of mRNA_H-elongata_contig55947.13022.1 vs. uniprot
Match: A0A7N8XNP0_9TELE (Deoxynucleoside triphosphate triphosphohydrolase SAMHD1-like n=1 Tax=Mastacembelus armatus TaxID=205130 RepID=A0A7N8XNP0_9TELE) HSP 1 Score: 187 bits (475), Expect = 1.130e-55 Identity = 92/185 (49.73%), Postives = 125/185 (67.57%), Query Frame = 1
Query: 4 DPLYGSLVLEPVIQRLMDTPQFQRLHGLKQLGASDFVYRSCTHTRFEHSVGVAHLAHRFAEGLRRRQPELGISAADVMCVKIAGLLHDLGHGPFSHMWDDEFV--RRMGFKWRHEIGSVNMLRFMLTDNKIDLCSFEPPLYARDVTFIEEMI--------LGTPDNKRTGRGVEKEFLYDIVNNT 528
DP++G + L P++ +++DTPQFQRL +KQLG + FVY +H RFEHS+GVA+LA E L R+QPEL I D++CVKIAGL HDLGHGPFSH++D +F+ R KW+HE SV M +++ D++++ E L +DVTFI+EMI TPD GRG EK FLY+IV+N+
Sbjct: 25 DPIHGHIELHPLLVKIIDTPQFQRLRNIKQLGGAYFVYPGASHNRFEHSLGVAYLAGELVEALSRKQPELKIDDRDILCVKIAGLCHDLGHGPFSHLFDGKFIPKARPDIKWKHEEASVKMFDYLMEDDEVEEEMSEYHLTDQDVTFIKEMIDPKGQTKETDTPDWPYKGRGQEKSFLYEIVSNS 209
BLAST of mRNA_H-elongata_contig55947.13022.1 vs. uniprot
Match: A0A671W5L0_SPAAU (HD domain-containing protein n=4 Tax=Sparus aurata TaxID=8175 RepID=A0A671W5L0_SPAAU) HSP 1 Score: 192 bits (487), Expect = 1.980e-55 Identity = 93/184 (50.54%), Postives = 128/184 (69.57%), Query Frame = 1
Query: 4 DPLYGSLVLEPVIQRLMDTPQFQRLHGLKQLGASDFVYRSCTHTRFEHSVGVAHLAHRFAEGLRRRQPELGISAADVMCVKIAGLLHDLGHGPFSHMWDDEFVR--RMGFKWRHEIGSVNMLRFMLTDNKIDLCSFEPPL-YARDVTFIEEMILGTPDNKRT-----GRGVEKEFLYDIVNNTR 531
DP++G L L P++ +++DTPQFQRL +KQLG + FVY +H RFEHS+GVAHLA A L+ +QPELGI+ D++CV+IAGL HDLGHGPFSH++D F++ R GFKW+HE S+ + +++ DN ++ E L +D+ FI+EMI G D + T GRG EK FLY+IV+N R
Sbjct: 13 DPIHGHLELHPLLIKIIDTPQFQRLRFIKQLGGAYFVYPGASHNRFEHSIGVAHLAGELARALKTQQPELGITDEDILCVQIAGLCHDLGHGPFSHLYDGMFIKKQRPGFKWKHEEASIEVFDYLMKDNDLEKEMKEWKLDLTKDLVFIKEMIYGPLDTEETPWPYKGRGKEKSFLYEIVSNKR 196
BLAST of mRNA_H-elongata_contig55947.13022.1 vs. uniprot
Match: A0A4W6BIL7_LATCA (HD domain-containing protein n=2 Tax=Lates calcarifer TaxID=8187 RepID=A0A4W6BIL7_LATCA) HSP 1 Score: 186 bits (473), Expect = 7.950e-55 Identity = 93/182 (51.10%), Postives = 125/182 (68.68%), Query Frame = 1
Query: 4 DPLYGSLVLEPVIQRLMDTPQFQRLHGLKQLGASDFVYRSCTHTRFEHSVGVAHLAHRFAEGLRRRQPELGISAADVMCVKIAGLLHDLGHGPFSHMWDDEFVR--RMGFKWRHEIGSVNMLRFMLTDNKI-DLCSFEPPLYARDVTFIEEMILGTPDNKR---TGRGVEKEFLYDIVNNTR 531
DP++G + L P++ R++DTPQFQRL +KQLG + +VY +H RFEHS+GVA+LA FA+ LR RQPEL I+ D++CV+IAGL HDLGHGPFSH++D F+R R G KW HE S+ M ++L N + D+ + L +D+ FI+EMI G P N GRG +K FLY+IV N R
Sbjct: 40 DPIHGHVELHPLLVRIIDTPQFQRLRNIKQLGGAYYVYPGASHNRFEHSIGVAYLAGEFAQALRSRQPELNITDKDILCVQIAGLCHDLGHGPFSHLFDQMFIRKARPGKKWEHEEASLKMFEYLLDKNGLKDIMKEQYGLEDKDLVFIKEMI-GGPQNTNWPYEGRGQDKSFLYEIVANKR 220
BLAST of mRNA_H-elongata_contig55947.13022.1 vs. uniprot
Match: UPI000E45D448 (deoxynucleoside triphosphate triphosphohydrolase SAMHD1-like n=1 Tax=Mastacembelus armatus TaxID=205130 RepID=UPI000E45D448) HSP 1 Score: 187 bits (475), Expect = 9.370e-54 Identity = 92/185 (49.73%), Postives = 125/185 (67.57%), Query Frame = 1
Query: 4 DPLYGSLVLEPVIQRLMDTPQFQRLHGLKQLGASDFVYRSCTHTRFEHSVGVAHLAHRFAEGLRRRQPELGISAADVMCVKIAGLLHDLGHGPFSHMWDDEFV--RRMGFKWRHEIGSVNMLRFMLTDNKIDLCSFEPPLYARDVTFIEEMI--------LGTPDNKRTGRGVEKEFLYDIVNNT 528
DP++G + L P++ +++DTPQFQRL +KQLG + FVY +H RFEHS+GVA+LA E L R+QPEL I D++CVKIAGL HDLGHGPFSH++D +F+ R KW+HE SV M +++ D++++ E L +DVTFI+EMI TPD GRG EK FLY+IV+N+
Sbjct: 21 DPIHGHIELHPLLVKIIDTPQFQRLRNIKQLGGAYFVYPGASHNRFEHSLGVAYLAGELVEALSRKQPELKIDDRDILCVKIAGLCHDLGHGPFSHLFDGKFIPKARPDIKWKHEEASVKMFDYLMEDDEVEEEMSEYHLTDQDVTFIKEMIDPKGQTKETDTPDWPYKGRGQEKSFLYEIVSNS 205
BLAST of mRNA_H-elongata_contig55947.13022.1 vs. uniprot
Match: UPI0011C178B9 (deoxynucleoside triphosphate triphosphohydrolase SAMHD1-like n=1 Tax=Sparus aurata TaxID=8175 RepID=UPI0011C178B9) HSP 1 Score: 185 bits (470), Expect = 3.750e-52 Identity = 94/200 (47.00%), Postives = 129/200 (64.50%), Query Frame = 1
Query: 4 DPLYGSLVLEPVIQRLMDTPQFQRLHGLKQLGASDFVYRSCTHTRFEHSVGVAHLAHRFAEGLRRRQPELGISAADVMCVKIAGLLHDLGHGPFSHMWDDEFVR--RMGFKWRHEIGSVNMLRFMLTDNKIDLCSFEPPL-YARDVTFIEEMILGT----------------PDNKRT-----GRGVEKEFLYDIVNNTR 531
DP++G L L P++ +++DTPQFQRL +KQLG + FVY +H RFEHS+GVAHLA A L+ +QPELGI+ D++CV+IAGL HDLGHGPFSH++D F++ R GFKW+HE S+ + +++ DN ++ E L +D+ FI+EMI G P+ K T GRG EK FLY+IV+N R
Sbjct: 126 DPIHGHLELHPLLIKIIDTPQFQRLRFIKQLGGAYFVYPGASHNRFEHSIGVAHLAGELARALKTQQPELGITDEDILCVQIAGLCHDLGHGPFSHLYDGMFIKKQRPGFKWKHEEASIEVFDYLMKDNDLEKEMKEWKLDLTKDLVFIKEMIYGPLDTEAAQDKGVEDMMDPEKKETPWPYKGRGKEKSFLYEIVSNKR 325
BLAST of mRNA_H-elongata_contig55947.13022.1 vs. uniprot
Match: A0A2R5GKB0_9STRA (Deoxynucleoside triphosphate triphosphohydrolase SAMHD1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GKB0_9STRA) HSP 1 Score: 185 bits (470), Expect = 1.040e-51 Identity = 93/180 (51.67%), Postives = 121/180 (67.22%), Query Frame = 1
Query: 4 DPLYGSLVLEPVIQRLMDTPQFQRLHGLKQLGASDFVYRSCTHTRFEHSVGVAHLAHRFAEGLRRRQPELGISAADVMCVKIAGLLHDLGHGPFSHMWDDEFVRRMGFKWRHEIGSVNMLRFMLTDNKIDLCSFEPPLYARDVTFIEEMILGTPDN----KRTGRGVEKEFLYDIVNNTR 531
DP++ S+ P++ +MDTP++QRL LKQLGA+ +VY TH+RFEHS+GVAHL F + LR +QP+LGI+ DV CV +AGL HDLGHGPFSH++D EF+R G W HE+GSV ML +L N+ID + L D+ F+EE+ILG R GR K FLYDI+NN R
Sbjct: 84 DPIHSSMEFPPLLLAVMDTPEYQRLKSLKQLGAAQYVYPGATHSRFEHSLGVAHLGMYFVKMLRSKQPDLGITENDVTCVGLAGLCHDLGHGPFSHLFDGEFLR--GKDWSHEMGSVRMLHLLLQRNRIDP-EVQYGLSQTDLKFVEELILGKEIEGGVKNRRGRDSSKSFLYDIINNER 260
BLAST of mRNA_H-elongata_contig55947.13022.1 vs. uniprot
Match: UPI00148FBC97 (deoxynucleoside triphosphate triphosphohydrolase SAMHD1-like n=1 Tax=Notolabrus celidotus TaxID=1203425 RepID=UPI00148FBC97) HSP 1 Score: 178 bits (452), Expect = 1.240e-51 Identity = 90/189 (47.62%), Postives = 122/189 (64.55%), Query Frame = 1
Query: 4 DPLYGSLVLEPVIQRLMDTPQFQRLHGLKQLGASDFVYRSCTHTRFEHSVGVAHLAHRFAEGLRRRQPELGISAADVMCVKIAGLLHDLGHGPFSHMWDDEFVRRMGFK-----WRHEIGSVNMLRFMLTDNKIDLCSFEPPLYARDVTFIEEMILGTPDNKRT--------GRGVEKEFLYDIVNNTR 531
DP++G + L P++ +++DTPQFQRL +KQLG FVY TH+RFEHS+G +LA + AE LR RQPEL I+ D++CV+IAGL HDLGHGPFSH++D F+ + W+HE GS +M ++ NK++ E L +D+TFI+EM G D KR GR +K FLYDIV+N R
Sbjct: 17 DPIHGLIKLHPLLIKIIDTPQFQRLRHIKQLGGVCFVYPGATHSRFEHSIGTGYLAGQLAENLRTRQPELDITEKDILCVQIAGLCHDLGHGPFSHLFDGCFLPKTKKSEEKENWKHEQGSCDMFDHLVRSNKLEPVMKEYGLKEKDMTFIKEMFFGPLDTKRNTDQKWPYNGREEKKAFLYDIVSNKR 205 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig55947.13022.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig55947.13022.1 >prot_H-elongata_contig55947.13022.1 ID=prot_H-elongata_contig55947.13022.1|Name=mRNA_H-elongata_contig55947.13022.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=183bp QDPLYGSLVLEPVIQRLMDTPQFQRLHGLKQLGASDFVYRSCTHTRFEHSback to top mRNA from alignment at H-elongata_contig55947:158..1543+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig55947.13022.1 ID=mRNA_H-elongata_contig55947.13022.1|Name=mRNA_H-elongata_contig55947.13022.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1386bp|location=Sequence derived from alignment at H-elongata_contig55947:158..1543+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig55947:158..1543+ >mRNA_H-elongata_contig55947.13022.1 ID=mRNA_H-elongata_contig55947.13022.1|Name=mRNA_H-elongata_contig55947.13022.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1098bp|location=Sequence derived from alignment at H-elongata_contig55947:158..1543+ (Himanthalia elongata Himel1 dioecious)back to top |