mRNA_H-elongata_contig55754.13006.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig55754.13006.1 vs. uniprot
Match: A0A6H5KSG8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG8_9PHAE) HSP 1 Score: 241 bits (616), Expect = 1.320e-67 Identity = 138/336 (41.07%), Postives = 200/336 (59.52%), Query Frame = 1
Query: 112 VGTKMIYKRKVGQDGKVEKYKCRLVAQGLWQVEGVHYTEKYSPTPSTASIRMRFATAAAKDGELRHFDAEQAFLKADIDEELYIEIPEKYQKFPGAVGRLSKAIYGLVQAGRCWNNKFCGNMAAIGFEQRKADPGVFRKVVDCEAEVVVVIHVDDILAHAKDKATMDRFAAELGKKFKLKDMGDARYYMGCHITRNRKACELKVDQHLYVESMVEKFDVKKESKIPATTGVPTLSKANGPGEGGNEEIPIPEAVRALMWTATMTRLDMMSAVRAVTRFCENPGAAHKKAVVKIMKYLLHTKDWGITYGGQGCGLCMEAYTDSDFGACLDTRRSVSG 1119
V +K + K ++GK++ +K RLVA+G Q+ V Y SP PS+ASI++ A A K L H+D +QA+ A +DEE+++++P + + +AIYGL Q+GR W + GFEQ KADP VFRK+VD +++VI+VDDIL D+ + A L KKF K++G+ +++ GC I R+ +A L++ Q Y++SMVE+FDVK S+IPAT G L EGG E P+ EA+ ++MW +T +R D+ AVRAV R P H A+ KI+ YL T+D GITY +G GL + Y D+ + A + RRSVSG
Sbjct: 782 VSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGA-DLGPKREDEEGG--EWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQ-RGSGLGLAVYVDASY-ADTEDRRSVSG 1111
BLAST of mRNA_H-elongata_contig55754.13006.1 vs. uniprot
Match: A0A6H5JN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN00_9PHAE) HSP 1 Score: 242 bits (617), Expect = 1.330e-67 Identity = 138/336 (41.07%), Postives = 200/336 (59.52%), Query Frame = 1
Query: 112 VGTKMIYKRKVGQDGKVEKYKCRLVAQGLWQVEGVHYTEKYSPTPSTASIRMRFATAAAKDGELRHFDAEQAFLKADIDEELYIEIPEKYQKFPGAVGRLSKAIYGLVQAGRCWNNKFCGNMAAIGFEQRKADPGVFRKVVDCEAEVVVVIHVDDILAHAKDKATMDRFAAELGKKFKLKDMGDARYYMGCHITRNRKACELKVDQHLYVESMVEKFDVKKESKIPATTGVPTLSKANGPGEGGNEEIPIPEAVRALMWTATMTRLDMMSAVRAVTRFCENPGAAHKKAVVKIMKYLLHTKDWGITYGGQGCGLCMEAYTDSDFGACLDTRRSVSG 1119
V +K + K ++GK++ +K RLVA+G Q+ V Y SP PS+ASI++ A A K L H+D +QA+ A +DEE+++++P + + +AIYGL Q+GR W + GFEQ KADP VFRK+VD +++VI+VDDIL D+ + A L KKF K++G+ +++ GC I R+ +A L++ Q Y++SMVE+FDVK S+IPAT G L EGG E P+ EA+ ++MW +T +R D+ AVRAV R P H A+ KI+ YL T+D GITY +G GL + Y D+ + A + RRSVSG
Sbjct: 1181 VSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDQVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGA-DLGPKREDEEGG--EWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQ-RGSGLGLAVYVDASY-ADTEDRRSVSG 1510
BLAST of mRNA_H-elongata_contig55754.13006.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE) HSP 1 Score: 241 bits (616), Expect = 1.780e-67 Identity = 138/336 (41.07%), Postives = 200/336 (59.52%), Query Frame = 1
Query: 112 VGTKMIYKRKVGQDGKVEKYKCRLVAQGLWQVEGVHYTEKYSPTPSTASIRMRFATAAAKDGELRHFDAEQAFLKADIDEELYIEIPEKYQKFPGAVGRLSKAIYGLVQAGRCWNNKFCGNMAAIGFEQRKADPGVFRKVVDCEAEVVVVIHVDDILAHAKDKATMDRFAAELGKKFKLKDMGDARYYMGCHITRNRKACELKVDQHLYVESMVEKFDVKKESKIPATTGVPTLSKANGPGEGGNEEIPIPEAVRALMWTATMTRLDMMSAVRAVTRFCENPGAAHKKAVVKIMKYLLHTKDWGITYGGQGCGLCMEAYTDSDFGACLDTRRSVSG 1119
V +K + K ++GK++ +K RLVA+G Q+ V Y SP PS+ASI++ A A K L H+D +QA+ A +DEE+++++P + + +AIYGL Q+GR W + GFEQ KADP VFRK+VD +++VI+VDDIL D+ + A L KKF K++G+ +++ GC I R+ +A L++ Q Y++SMVE+FDVK S+IPAT G L EGG E P+ EA+ ++MW +T +R D+ AVRAV R P H A+ KI+ YL T+D GITY +G GL + Y D+ + A + RRSVSG
Sbjct: 1161 VSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGA-DLGPKREDEEGG--EWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQ-RGSGLGLAVYVDASY-ADTEDRRSVSG 1490
BLAST of mRNA_H-elongata_contig55754.13006.1 vs. uniprot
Match: A0A6H5KF60_9PHAE (Uncharacterized protein n=12 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF60_9PHAE) HSP 1 Score: 241 bits (616), Expect = 1.820e-67 Identity = 138/336 (41.07%), Postives = 200/336 (59.52%), Query Frame = 1
Query: 112 VGTKMIYKRKVGQDGKVEKYKCRLVAQGLWQVEGVHYTEKYSPTPSTASIRMRFATAAAKDGELRHFDAEQAFLKADIDEELYIEIPEKYQKFPGAVGRLSKAIYGLVQAGRCWNNKFCGNMAAIGFEQRKADPGVFRKVVDCEAEVVVVIHVDDILAHAKDKATMDRFAAELGKKFKLKDMGDARYYMGCHITRNRKACELKVDQHLYVESMVEKFDVKKESKIPATTGVPTLSKANGPGEGGNEEIPIPEAVRALMWTATMTRLDMMSAVRAVTRFCENPGAAHKKAVVKIMKYLLHTKDWGITYGGQGCGLCMEAYTDSDFGACLDTRRSVSG 1119
V +K + K ++GK++ +K RLVA+G Q+ V Y SP PS+ASI++ A A K L H+D +QA+ A +DEE+++++P + + +AIYGL Q+GR W + GFEQ KADP VFRK+VD +++VI+VDDIL D+ + A L KKF K++G+ +++ GC I R+ +A L++ Q Y++SMVE+FDVK S+IPAT G L EGG E P+ EA+ ++MW +T +R D+ AVRAV R P H A+ KI+ YL T+D GITY +G GL + Y D+ + A + RRSVSG
Sbjct: 1324 VSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGA-DLGPKREDEEGG--EWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQ-RGSGLGLAVYVDASY-ADTEDRRSVSG 1653
BLAST of mRNA_H-elongata_contig55754.13006.1 vs. uniprot
Match: A0A6H5JC10_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC10_9PHAE) HSP 1 Score: 233 bits (593), Expect = 6.120e-66 Identity = 133/336 (39.58%), Postives = 199/336 (59.23%), Query Frame = 1
Query: 112 VGTKMIYKRKVGQDGKVEKYKCRLVAQGLWQVEGVHYTEKYSPTPSTASIRMRFATAAAKDGELRHFDAEQAFLKADIDEELYIEIPEKYQKFPGAVGRLSKAIYGLVQAGRCWNNKFCGNMAAIGFEQRKADPGVFRKVVDCEAEVVVVIHVDDILAHAKDKATMDRFAAELGKKFKLKDMGDARYYMGCHITRNRKACELKVDQHLYVESMVEKFDVKKESKIPATTGVPTLSKANGPGEGGNEEIPIPEAVRALMWTATMTRLDMMSAVRAVTRFCENPGAAHKKAVVKIMKYLLHTKDWGITYGGQGCGLCMEAYTDSDFGACLDTRRSVSG 1119
V +K + K ++GK++ +K RLVA+G Q+ V Y SP PS+ASI++ A A K L H+D +QA+ A +DEE+++++P + + +AIYGL Q+GR W + GFEQ KADP VFRK+VD +++VI+VDDIL D+ + A L KKF K++ + +++ GC I R+ + L++ Q Y++SMV++FDV+ S+IPA+ GV L +GG E P+ EA+ ++MW +T +R D+ AVRAV R P H A+ KI+ YL T+D GITY +G GL + Y D+ + A + RRSVSG
Sbjct: 336 VSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHEIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLSKKFPTKNLEECQWFDGCAIERDVETGTLRISQTAYIDSMVKRFDVQSTSRIPASPGV-DLGPKRDDEKGG--EWPVREAIGSIMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQ-RGSGLGLAVYVDASY-ADTEDRRSVSG 665
BLAST of mRNA_H-elongata_contig55754.13006.1 vs. uniprot
Match: A0A6H5JCG0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCG0_9PHAE) HSP 1 Score: 226 bits (575), Expect = 3.790e-65 Identity = 133/336 (39.58%), Postives = 191/336 (56.85%), Query Frame = 1
Query: 112 VGTKMIYKRKVGQDGKVEKYKCRLVAQGLWQVEGVHYTEKYSPTPSTASIRMRFATAAAKDGELRHFDAEQAFLKADIDEELYIEIPEKYQKFPGAVGRLSKAIYGLVQAGRCWNNKFCGNMAAIGFEQRKADPGVFRKVVDCEAEVVVVIHVDDILAHAKDKATMDRFAAELGKKFKLKDMGDARYYMGCHITRNRKACELKVDQHLYVESMVEKFDVKKESKIPATTGVPTLSKANGPGEGGNEEIPIPEAVRALMWTATMTRLDMMSAVRAVTRFCENPGAAHKKAVVKIMKYLLHTKDWGITYGGQGCGLCMEAYTDSDFGACLDTRRSVSG 1119
V +K + K +DGK+EK+K RLVA+G Q+ V Y SP PS+ASI++ A A K +L H+D +QAF A +DE++++ +P + V + +AIYGL Q+GR W + GFEQ KADP VFRK+ D D IL D + A+ L K F KD+G+ ++ GC + R+ +A L++ Q Y++S+V +FDV+ S IPA+ GV K + G E P+ EA+ ++MW +T +R D+ AVRAV R P H KA+VKI+ YL T+D GITY +G GL + Y D+ + A + RRSVSG
Sbjct: 45 VSSKWRFTWKTNKDGKIEKFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKSLKLNHWDVKQAFTHAKLDEDVFLRLPAGCGEKSHKVVKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMKDDVVXXXXXXXXDXILVAGSDDDCKELLAS-LNKAFPTKDLGECVWFDGCAVERDLEAGTLRISQTAYIDSIVNRFDVQSTSSIPASPGVDIGPKRDDESGG---EWPVREAIGSMMWVSTFSRPDISFAVRAVARHAHAPAERHWKAIVKILAYLKETRDLGITYE-RGSGLGLAVYVDASY-ADAEDRRSVSG 374
BLAST of mRNA_H-elongata_contig55754.13006.1 vs. uniprot
Match: A0A6H5JQN6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQN6_9PHAE) HSP 1 Score: 226 bits (577), Expect = 2.240e-63 Identity = 132/326 (40.49%), Postives = 191/326 (58.59%), Query Frame = 1
Query: 139 KVGQDGKVEKYKCRLVAQGLWQVEGVHYTEKYSPTPSTASIRMRFATAAAKDGELRHFDAEQAFLKADIDEELYIEIPEKYQKFPGAVGRLSKAIYGLVQAGRCWNNKFCGNMAAIGFEQRKADPGVFRKVVDCEAEVVVVIHVDDILAHAKDKATMDRFAAELGKKFKLKDMGDARYYMGCHITRNRKACELKVDQHLYVESMVEKFDVKKESKIPATTGVPTLSKANGPGEGGNEEIPIPEAVRALMWTATMTRLDMMSAVRAVTRFCENPGAAHKKAVVKIMKYLLHTKDWGITYGGQGCGLCMEAYTDSDFGACLDTRRSVS 1116
K ++GK++ K R VA+G Q+ + SP PS+ASI++ A A K L H+D +QA+ A +DEE+++++P + + +AIYGL Q+GR W + GFEQ KADP VFRK+VD +++VI+VDDIL D+ + A L KKF K++G+ +++ GC I R+ A L++ Q Y++SMVE+FDVK S+IPAT G L +GG E P+ EAV ++MW +T +R D+ AVRAV R P H A+ KI+ YL T+D GITY +G GL + Y D+ + A + RRSVS
Sbjct: 382 KTNKEGKIDTLKARRVARGFSQITSIISIPSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVDAGTLRISQTAYIDSMVERFDVKSTSRIPATPGA-DLGPKREDDKGG--EWPVREAVGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQ-RGSGLGLAVYVDARY-ADTEDRRSVS 701
BLAST of mRNA_H-elongata_contig55754.13006.1 vs. uniprot
Match: A0A6H5JQW4_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQW4_9PHAE) HSP 1 Score: 226 bits (577), Expect = 2.390e-62 Identity = 136/344 (39.53%), Postives = 195/344 (56.69%), Query Frame = 1
Query: 112 VGTKMIYKRKVGQDGKVEKYKCRLVAQGLWQVEGVHYTEKYSPTPSTASIRMRFATAAAKDGELRHFDAEQAFLKADIDEELYIEIPEKYQKFPGAVGRLSKAIYGLVQAGRCWNNKFCGNMAAIGFEQRKADPGVFRKVVDCEAEVVVVIHVDDILAHAKDKATMDRFAAELGKKFKLKDMGDARYYMGCHITRNRKACELKVDQHLYVESMVEKFDVKKESKIPATTGVPTLSKANGPGEGGNEEIPIPEAVRALMWTATMTRLDMMSAVRAVTRFCENPGAAHKKAVVKIMKYLLHTKDWGITYGGQGCGLCMEAYTDSDFGACLDTRRSVSGAVLKLAKG 1143
V +K + K ++GK++K+K R+VA+G Q+ V Y SP PS+ASI + A A K L H+D +QA A +DEE++ +P + + +AIYGL Q+GR W + GFEQ KADP VFRK+VD +++VI+VDDIL D+ + A L KKF K++G+ +++ GC I R+ +A L++ Q Y++SMVE+FDVK S+IPAT G L EGG E P+ +A+ ++MW +T +R D+ A RAV R P H A+ KI+ YL T+D GITY +G GL Y D+ + DT S SG+ L G
Sbjct: 891 VSSKWCFSWKTNKEGKIDKFKARVVARGFSQLPNVDYFRSSSPCPSSASIMLMLAVANEKGMNLNHWDVKQASPHATLDEEVFPRLPAGCGDKSHQIVKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGA-DLGPKREDEEGG--EWPVRKAIGSMMWVSTFSRPDVSFAARAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQ-RGSGLGPSVYVDASYA---DTEDSRSGSGLATTVG 1226
BLAST of mRNA_H-elongata_contig55754.13006.1 vs. uniprot
Match: A0A6H5JJY0_9PHAE (CCHC-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJY0_9PHAE) HSP 1 Score: 223 bits (567), Expect = 3.330e-61 Identity = 129/336 (38.39%), Postives = 196/336 (58.33%), Query Frame = 1
Query: 112 VGTKMIYKRKVGQDGKVEKYKCRLVAQGLWQVEGVHYTEKYSPTPSTASIRMRFATAAAKDGELRHFDAEQAFLKADIDEELYIEIPEKYQKFPGAVGRLSKAIYGLVQAGRCWNNKFCGNMAAIGFEQRKADPGVFRKVVDCEAEVVVVIHVDDILAHAKDKATMDRFAAELGKKFKLKDMGDARYYMGCHITRNRKACELKVDQHLYVESMVEKFDVKKESKIPATTGVPTLSKANGPGEGGNEEIPIPEAVRALMWTATMTRLDMMSAVRAVTRFCENPGAAHKKAVVKIMKYLLHTKDWGITYGGQGCGLCMEAYTDSDFGACLDTRRSVSG 1119
V +K + KV ++G+++K+K RLVA+G Q+ V Y SP PS+ASI++ A A K L H+D +QA A +DEE+++++P + + AIYGL Q+ R W + GFE+ KAD VFRK+VD +++VI+ DDIL D+ + A L KKF K++G+ +++ GC I R+ +A L++ Q Y++SM+++FDV+ S+IPAT G L EGG E P+ EA+ ++MW +T +R D+ AVRA R +P H A+ ++ YL T+D GITY +G GL + Y D+ + A + RRSVSG
Sbjct: 668 VSSKWCFSWKVNKEGRIDKFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAHTHATLDEEVFLKLPAGCGDRSYKIVKAEPAIYGLKQSERQWGYLAADTLVENGFEECKADRCVFRKMVDEVVVMIIVIYADDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMLKRFDVQSTSRIPATPGA-DLGPIREDEEGG--EWPVREAIGSMMWMSTFSRPDVSFAVRAAARHAHSPAERHWDAIQTVLGYLKGTRDLGITYQ-RGSGLGLAVYVDASY-ADTEDRRSVSG 997
BLAST of mRNA_H-elongata_contig55754.13006.1 vs. uniprot
Match: A0A6A3Q908_9STRA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=8 Tax=Phytophthora TaxID=4783 RepID=A0A6A3Q908_9STRA) HSP 1 Score: 215 bits (548), Expect = 8.210e-61 Identity = 135/387 (34.88%), Postives = 214/387 (55.30%), Query Frame = 1
Query: 19 DDWRKAEETKMRGMVENCVYKQVARSKDKLLVGTKMIYKRKVGQDGKVEKYKCRLVAQGLWQVEGVHYTEKYSPTPSTASIRMRFATAAAKDGELRHFDAEQAFLKADIDEELYIEIPEKYQKF---------PGAVGRLSKAIYGLVQAGRCWNNKFCGNMAAIGFEQRKADPGVFRKVVDCEAEVVVVIHVDDILAHAKDKATMDRFAAELGKKFKLKDMGDARYYMGCHITRNRKACELKVDQHLYVESMVEKFDVK--KESKIPATTGVPTLSKANGP----GEGGNEEIPIPEAVRALMWTATMTRLDMMSAVRAVTRFCENPGAAHKKAVVKIMKYLLHTKDWGITYGGQGCGLCMEAYTDSDFGACLDTRRSVSGAVLKL 1134
D+W+KA ++++ ++ N +K V + + +G + ++ K + G+V +YK RLVA+G Q G+ Y E YSP S+R A A+ E+ D + AFL +++EE+Y+E+PE ++ V L +++YGL QA R WN ++ + GFE ADP V+ + + E E +V ++VDD+L ++ KA + A + +KF++KD+G AR+ +G I + + L + Q Y ES+++KF + K P GV L+KA+ P + + P V +LM+ A TR D+ AV ++RF ENPG H A +K+++YLL TKD GI Y G G EAY+D+D+ D RRSVSG +L L
Sbjct: 79 DEWKKAIASELKSLIVNKTWKLVPKPAHQRPIGCRWVFALKRNEKGQVVRYKARLVAKGYSQRHGIDYEEAYSPVAYLNSVRAMLAKCGAEGMEIEQCDVDTAFLYGELEEEIYMELPEGLRELLDLAEAEGEDDVVCMLLQSLYGLKQASRVWNETIDKHLKSTGFEPADADPCVYTRG-EGEGECIVCLYVDDMLIASRQKAVIASVKAGIAEKFRIKDLGRARFIVGIEIDYDMERRTLGISQKAYTESIIKKFGQENAKPCLTPLEPGV-QLTKADEPQTEEDKAKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGL-LGTQPEAYSDADWAGNRDDRRSVSGMLLML 462 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig55754.13006.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig55754.13006.1 >prot_H-elongata_contig55754.13006.1 ID=prot_H-elongata_contig55754.13006.1|Name=mRNA_H-elongata_contig55754.13006.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=384bp MESPEWDDWRKAEETKMRGMVENCVYKQVARSKDKLLVGTKMIYKRKVGQback to top mRNA from alignment at H-elongata_contig55754:2671..3833+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig55754.13006.1 ID=mRNA_H-elongata_contig55754.13006.1|Name=mRNA_H-elongata_contig55754.13006.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1163bp|location=Sequence derived from alignment at H-elongata_contig55754:2671..3833+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig55754:2671..3833+ >mRNA_H-elongata_contig55754.13006.1 ID=mRNA_H-elongata_contig55754.13006.1|Name=mRNA_H-elongata_contig55754.13006.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2304bp|location=Sequence derived from alignment at H-elongata_contig55754:2671..3833+ (Himanthalia elongata Himel1 dioecious)back to top |