mRNA_H-elongata_contig55717.12999.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig55717.12999.1
Unique NamemRNA_H-elongata_contig55717.12999.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig55717.12999.1 vs. uniprot
Match: D7FQA3_ECTSI (Cysteine proteinase Cathepsin F (ISS) n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQA3_ECTSI)

HSP 1 Score: 302 bits (774), Expect = 1.580e-99
Identity = 158/219 (72.15%), Postives = 193/219 (88.13%), Query Frame = 1
Query:   22 SVFFLLCTRLKTSPSLLYQAGGNDALALLLTVTTNLLGVLTVPFFVKAVVKAG-DAEIDAVDLLVKLIITVLVPLIIGKIVREAVPGTKAWVKRWKLYLSLTNNFMIIMVVWQTLSRGQDDITSVAFEQILSVVAAGIALHAIYLSINYTVCRFVLRLERREFKAVVLMSSQKTLPVSVTVIAFLGGVGEEGLMTIPCIIGHLSQLFIDAYISTRWARE 675
            SVF ++ T L +  +L+  AGGNDALALLLTVTTNLLGV+TVPF+VK VV AG DA ID V LLVKLII+VLVPL++GK++REAVPG KA VKR+K+ LSLT++ M+IMVVWQTLSR QD++TSVAF QILSV+A+GI LH +YLSINY +C+++L+L+RREFKAVVLMSSQKTLPVSVTVI FLG VG+EGLMTIPCI+GH+SQLF+DAYI++RWA +
Sbjct:  119 SVFCVVPTTLSSGVTLVMNAGGNDALALLLTVTTNLLGVVTVPFYVKGVVNAGEDASIDPVGLLVKLIISVLVPLVVGKVIREAVPGAKARVKRFKVRLSLTSSAMLIMVVWQTLSRAQDNLTSVAFTQILSVIASGIGLHLVYLSINYPICKYILKLKRREFKAVVLMSSQKTLPVSVTVIGFLGNVGQEGLMTIPCIVGHMSQLFMDAYIASRWAND 337          
BLAST of mRNA_H-elongata_contig55717.12999.1 vs. uniprot
Match: A0A836CLX8_9STRA (Cysteine proteinase cathepsin F n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLX8_9STRA)

HSP 1 Score: 209 bits (532), Expect = 1.060e-62
Identity = 112/224 (50.00%), Postives = 156/224 (69.64%), Query Frame = 1
Query:   22 SVFFLLCTRLKTSPSLLYQAGGNDALALLLTVTTNLLGVLTVPFFVKAVVKA-----GDAEIDAVDLLVKLIITVLVPLIIGKIVREAVPGTKAWVKRWKLYLSLTNNFMIIMVVWQTLSRGQDDITSVAFEQILSVVAAGIALHAIYLSINYTVCRFVLRLERREFKAVVLMSSQKTLPVSVTVIAFLGGVGEEGLMTIPCIIGHLSQLFIDAYISTRWAREV 678
            +VF  + T L +  S++ QAGGN ALALLLTV TNL  V+T PF++ A+ K+       A ID V LL KLI+TVLVPL+ GK++R+ VPG K +V R K+ L + NN M+ ++VW T+S   +D+ S  F  I  V+A GIA+H IYLS+N+ + +F L+L   EFKAV +M+SQKTLP+SVT+I++L  +G  G MT+PCI+GH+SQLFIDA + + W  + 
Sbjct:   98 TVFCAVPTTLASGVSMVTQAGGNGALALLLTVVTNLTAVVTTPFWLSAMFKSKSQGTNGATIDPVSLLQKLIVTVLVPLVFGKLLRDLVPGCKGFVTRQKVKLGVCNNIMLTLIVWLTISDAAEDLLSTPFADIAVVIACGIAVHVIYLSLNWPMGKFALKLPLPEFKAVTIMASQKTLPLSVTIISYLTALGSTGFMTLPCIVGHMSQLFIDAGLQSMWLAQA 321          
BLAST of mRNA_H-elongata_contig55717.12999.1 vs. uniprot
Match: A0A836CJ89_9STRA (Cysteine proteinase cathepsin F n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ89_9STRA)

HSP 1 Score: 185 bits (470), Expect = 1.070e-53
Identity = 98/225 (43.56%), Postives = 151/225 (67.11%), Query Frame = 1
Query:   22 SVFFLLCTRLKTSPSLLYQAGGNDALALLLTVTTNLLGVLTVPFFVKAVVKAGDAEIDAVDLLVKLIITVLVPLIIGKIVREAVPGTKAWVKRWKLYLSLTNNFMIIMVVWQTLSRGQDDITSVAFEQILSVVAAGIALHAIYLSINYTVCRFVLRLERREFKAVVLMSSQKTLPVSVTVIAFLGGVGEEGLMTIPCIIGHLSQLFIDAYISTRWAREVESGGEN 696
            ++F  + T +    ++   AGGN ALAL+LTV +NLLGVL  PF+++A     D  IDA+DLLV L+ITVL PL++G+ +R  VP  +  V R K  L L ++  + ++VWQT+SR  +DI +V+   I++++AA + +H  YL +++   R++LRL   E KAVV+MSS+KTLPV++ VIAFL  VG EGL++IP I+    QLF+D++I+T+W  +  +   +
Sbjct:   93 AIFCGVPTTIAVGVAMTTAAGGNAALALMLTVFSNLLGVLITPFWLQAFFSGQDVAIDALDLLVNLLITVLAPLLVGQAIRFLVPPVRTLVTRHKTALKLISSTSLALIVWQTVSRSAEDILAVSGGSIVAIIAASLIMHVAYLVVSFVTARYLLRLGDAELKAVVIMSSEKTLPVAIAVIAFLTNVGSEGLLSIPPIVSQQVQLFMDSFIATKWGEKTSAAARH 317          
BLAST of mRNA_H-elongata_contig55717.12999.1 vs. uniprot
Match: A0A6H5KQQ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQQ7_9PHAE)

HSP 1 Score: 178 bits (452), Expect = 9.950e-52
Identity = 95/125 (76.00%), Postives = 112/125 (89.60%), Query Frame = 1
Query:   76 QAGGNDALALLLTVTTNLLGVLTVPFFVKAVVKAGD-AEIDAVDLLVKLIITVLVPLIIGKIVREAVPGTKAWVKRWKLYLSLTNNFMIIMVVWQTLSRGQDDITSVAFEQILSVVAAGIALHAI 447
            QAGGNDALALLLTVTTNLLGV+TVPF+VK VV AGD A ID V LLVKLII+VLVPL++GK++REAVPG KAWVKR+K+ LSLT++ M+IMVVWQTLSR QD++TSVAF QILSV+A+GI LH +
Sbjct:  172 QAGGNDALALLLTVTTNLLGVVTVPFYVKGVVNAGDDASIDPVGLLVKLIISVLVPLVVGKVIREAVPGAKAWVKRFKVRLSLTSSAMLIMVVWQTLSRAQDNLTSVAFTQILSVIASGIGLHLV 296          
BLAST of mRNA_H-elongata_contig55717.12999.1 vs. uniprot
Match: A0A7S3W5J0_9SPIT (Hypothetical protein n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3W5J0_9SPIT)

HSP 1 Score: 180 bits (457), Expect = 3.820e-51
Identity = 99/222 (44.59%), Postives = 147/222 (66.22%), Query Frame = 1
Query:   28 FFLLC---TRLKTSPSLLYQAGGNDALALLLTVTTNLLGVLTVPFFVKAVVKAGDAEIDAVDLLVKLIITVLVPLIIGKIVREAVPGTKAWVKRWKLYLSLTNNFMIIMVVWQTLSRGQDDITSVAFEQILSVVAAGIALHAIYLSINYTVCRFVLRLERREFKAVVLMSSQKTLPVSVTVIAFLGG-VGEEGLMTIPCIIGHLSQLFIDAYISTRWAREVE 681
            F L C   T + +  +L+    GN ALALLLTVT+NLLGV TVPFF+  ++   D +ID   LLVKL++ +L+PLI+GK +R+     +AW+KR K  +S T++F + ++ W  LS     + S+++E +L ++A G+ +H IYL  NY+V   +L  E    KAVV+M SQKTLP+++TV+AF    +GE GL+ IPCI+ HL+Q+F+DA+I  +WA   E
Sbjct:  144 FILFCSMPTTINSGVALVTAGKGNVALALLLTVTSNLLGVFTVPFFLSLLLNVSDIKIDPGPLLVKLLLMILLPLIMGKAIRDMSKRVQAWLKRHKQLVSNTSSFFLCLIPWMKLSESNTALRSLSWEAVLGLIACGLVIHTIYLIFNYSVAHCILGTELSLKKAVVVMCSQKTLPMAMTVLAFFPTTLGEPGLIAIPCIVTHLTQIFMDAFIVAKWATAKE 365          
BLAST of mRNA_H-elongata_contig55717.12999.1 vs. uniprot
Match: A0A5B8MCM7_9CHLO (Putative sodium/metabolite cotransporter n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MCM7_9CHLO)

HSP 1 Score: 175 bits (443), Expect = 7.240e-49
Identity = 101/225 (44.89%), Postives = 150/225 (66.67%), Query Frame = 1
Query:   22 SVFFLLCTRLKTSPSLLYQAGGNDALALLLTVTTNLLGVLTVPFFVKAVVKAG-DAEIDAVDLLVKLIITVLVPLIIGKIVREAVPGTKAWVKRWKLYLSLTNNFMIIMVVWQTLSRGQDDITSVAFEQILSVVAAGIALHAIYLSINYTVCRFVLRLERREFKAVVLMSSQKTLPVSVTVIAFLGGV--GEEGLMTIPCIIGHLSQLFIDAYISTRWAREVESG 687
            SVF  + T L +  +L+ Q GGN ALALLLTV TNLLG+LTVPF VK V+ +  D + DA+ LL+KL IT+L PLI+GK++R +      + K  K   S+ N+  ++++VWQTLS+ Q ++   +   +L +VA GI +H  +L  N+ +   +LR+E+ E++A++L +SQKTLP++VTVI FL     G  GL+ +PC++ HL Q+ ID+ I +RW   VESG
Sbjct:  114 SVFCAVPTTLSSGVALVTQGGGNAALALLLTVGTNLLGILTVPFAVKLVLDSEEDFDFDALSLLIKLAITILAPLILGKLLRHSHQALGKFAKEKKQKFSMANSLCLVLIVWQTLSKAQPEVIDQSAGDLLLLVAGGIGIHIAFLVFNF-ISVSLLRVEQPEYRALLLCTSQKTLPIAVTVINFLPEPYEGYHGLLVVPCVVSHLVQILIDSVIVSRWMGGVESG 337          
BLAST of mRNA_H-elongata_contig55717.12999.1 vs. uniprot
Match: A0A061RZ11_9CHLO (Cysteine proteinase cathepsin f n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RZ11_9CHLO)

HSP 1 Score: 171 bits (432), Expect = 2.780e-47
Identity = 103/219 (47.03%), Postives = 140/219 (63.93%), Query Frame = 1
Query:   22 SVFFLLCTRLKTSPSLLYQAGGNDALALLLTVTTNLLGVLTVPFFVKAVVKA-------GDAEIDAVDLLVKLIITVLVPLIIGKIVREAVPGTKAWVKRWKLYLSLTNNFMIIMVVWQTLSRGQDDITSVAFEQILSVVAAGIALHAIYLSINYTVCRFVLRLERREFKAVVLMSSQKTLPVSVTVIAFLGG-VGEEGLMTIPCIIGHLSQLFIDAYI 654
            +VF  + T L +  +L+ QA GN ALAL+LTVTTN+LGV T P  +   ++        G    D   L+VKL+ T+L P + GK+VRE+      WV   K  LSLTNN ++I +VW T+S G+D I +   E I   +A GIALHA+ L++N   C ++LRL   E KA  ++ SQKTLPVS+TV++FL   +G  GL+TIPCIIGHLSQLF DA++
Sbjct:  166 AVFCSVPTTLTSGVTLVNQAAGNGALALMLTVTTNVLGVFTTPLMLALNLRVSGMSAETGTITFDTGALIVKLVATILAPTVFGKLVRESHHSVSDWVAGHKTLLSLTNNSLLICIVWMTISSGRDVIVAQPAEMIFLAIAVGIALHAVLLALNGAAC-WLLRLAPPERKAAHILGSQKTLPVSITVLSFLPPRLGNIGLLTIPCIIGHLSQLFTDAFL 383          
BLAST of mRNA_H-elongata_contig55717.12999.1 vs. uniprot
Match: A0A7S0SJ85_9CHLO (Hypothetical protein n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0SJ85_9CHLO)

HSP 1 Score: 167 bits (422), Expect = 3.630e-46
Identity = 99/229 (43.23%), Postives = 146/229 (63.76%), Query Frame = 1
Query:   22 SVFFLLCTRLKTSPSLLYQAGGNDALALLLTVTTNLLGVLTVPFFVKAVVKAGDAE-----------IDAVDLLVKLIITVLVPLIIGKIVREAVPGTKAWVKRWKLYLSLTNNFMIIMVVWQTLSRGQDDITSVAFEQILSVVAAGIALHAIYLSINYTVCRFVLRLERREFKAVVLMSSQKTLPVSVTVIAFLGGV--GEEGLMTIPCIIGHLSQLFIDAYISTRWA 669
            ++F  + T L +  +L+  A GN ALAL+LTVTTN+LGV TVPF + AV+ +                 A+ LL+KL+I++++P+ IGK VRE     +     +K+ L L NN  +I +VW ++S+ ++ +       I  +V AGI LH I+L++N+T+   VLRL  +E +AV+LM+S KTLPV+VTVI++L     G  GL+ IPCI+GH+SQLFIDA I+ RWA
Sbjct:  110 ALFCCVPTTLTSGVTLVTSALGNSALALMLTVTTNVLGVFTVPFILNAVLDSAPGNGXXXXXXXSVAKTAMQLLIKLVISIIIPMSIGKSVREFFAVAQKATATYKVELGLVNNSCLIAIVWMSVSKSREKLVGQTPLNIFIIVVAGITLHIIFLAVNWTMTTPVLRLREKERRAVLLMTSAKTLPVAVTVISYLDEAVWGGHGLIAIPCIVGHVSQLFIDAAIAARWA 338          
BLAST of mRNA_H-elongata_contig55717.12999.1 vs. uniprot
Match: A0A7S2T7R9_9CHLO (Hypothetical protein n=1 Tax=Chloropicon roscoffensis TaxID=1461544 RepID=A0A7S2T7R9_9CHLO)

HSP 1 Score: 163 bits (413), Expect = 8.300e-46
Identity = 89/198 (44.95%), Postives = 132/198 (66.67%), Query Frame = 1
Query:   82 GGNDALALLLTVTTNLLGVLTVPFFVKAVVKAGDAEIDAVDLLVKLIITVLVPLIIGKIVREAVPGTKAWVKRWKLYLSLTNNFMIIMVVWQTLSRGQDDITSVAFEQILSVVAAGIALHAIYLSINYTVCRFVLRLERREFKAVVLMSSQKTLPVSVTVIAFLGGV--GEEGLMTIPCIIGHLSQLFIDAYISTRWA 669
            GGN ALALLLTV +NLLG+LTVPF VK ++ + D  +DA+ LL+KL+IT+L PL  GK +R +      + K  K   S+ N+  +I++VWQTLS+ Q  +      ++L ++A GI +H ++L +N+     +LR+E  E++AV+L SSQKTLP++VTVI FL     G  GL+ +PC++ HL Q+ ID+ I + WA
Sbjct:    1 GGNAALALLLTVGSNLLGILTVPFAVKLILDSEDFNLDALSLLLKLLITILTPLCFGKALRHSNKKLAQFAKEQKQKFSMANSLCLILIVWQTLSKAQPQVIDQKAGELLLLIAGGIGIHLVFLMVNFFFIS-LLRMETEEYRAVLLCSSQKTLPIAVTVINFLPEPYEGYHGLLVVPCVVSHLVQILIDSVIVSHWA 197          
BLAST of mRNA_H-elongata_contig55717.12999.1 vs. uniprot
Match: C1E9H5_MICCC (Bile Acid:Na+ symporter family n=2 Tax=Micromonas TaxID=38832 RepID=C1E9H5_MICCC)

HSP 1 Score: 165 bits (418), Expect = 1.480e-45
Identity = 95/228 (41.67%), Postives = 148/228 (64.91%), Query Frame = 1
Query:   22 SVFFLLCTRLKTSPSLLYQAGGNDALALLLTVTTNLLGVLTVPFFVKAVV------KAGDAEID----AVDLLVKLIITVLVPLIIGKIVREAVPGTKAWVKRWKLYLSLTNNFMIIMVVWQTLSRGQDDITSVAFEQILSVVAAGIALHAIYLSINYTVCRFVLRLERREFKAVVLMSSQKTLPVSVTVIAFLGGV--GEEGLMTIPCIIGHLSQLFIDAYISTRWA 669
            ++F  + T L +  +L+  A GN  +AL+LTVTTN+LGV TVPF + AV+       +G  + D    A  LL+KLII++++P+ +GK  RE V    ++  ++K  L LTNN  +I +VW ++S  +  +   +   I  +V AG+ LH  +L++N+ +   V+++   E +AV+LM+SQKTLPV+VT+IA+L     G +GL+ IPCI+GH+SQLFIDAYI++ WA
Sbjct:  124 ALFACVPTTLTSGVTLVTSALGNGVMALMLTVTTNVLGVFTVPFILNAVLLSAPGGDSGGTDTDMAETAAKLLLKLIISIIIPMGVGKATREFVEQAPSFTTKYKTELGLTNNSCLIAIVWMSISNSRGKLVRESALNIFVIVVAGVLLHLFFLTMNWVMTTAVMKIPEAERRAVLLMTSQKTLPVAVTIIAYLDEARWGAQGLIAIPCIVGHVSQLFIDAYIASIWA 351          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig55717.12999.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQA3_ECTSI1.580e-9972.15Cysteine proteinase Cathepsin F (ISS) n=2 Tax=Ecto... [more]
A0A836CLX8_9STRA1.060e-6250.00Cysteine proteinase cathepsin F n=1 Tax=Tribonema ... [more]
A0A836CJ89_9STRA1.070e-5343.56Cysteine proteinase cathepsin F n=1 Tax=Tribonema ... [more]
A0A6H5KQQ7_9PHAE9.950e-5276.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3W5J0_9SPIT3.820e-5144.59Hypothetical protein n=1 Tax=Strombidinopsis acumi... [more]
A0A5B8MCM7_9CHLO7.240e-4944.89Putative sodium/metabolite cotransporter n=1 Tax=C... [more]
A0A061RZ11_9CHLO2.780e-4747.03Cysteine proteinase cathepsin f n=1 Tax=Tetraselmi... [more]
A0A7S0SJ85_9CHLO3.630e-4643.23Hypothetical protein n=1 Tax=Mantoniella antarctic... [more]
A0A7S2T7R9_9CHLO8.300e-4644.95Hypothetical protein n=1 Tax=Chloropicon roscoffen... [more]
C1E9H5_MICCC1.480e-4541.67Bile Acid:Na+ symporter family n=2 Tax=Micromonas ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig55717contigH-elongata_contig55717:1276..2467 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score303.1
Seed ortholog evalue1.1e-79
Seed eggNOG ortholog2880.D7FQA3
KEGG koko:K14347
KEGG TC2.A.93.1
EggNOG free text desc.symporter activity
EggNOG OGsCOG0385@1,KOG4821@2759
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000,ko04147
Hectar predicted targeting categorysignal peptide
Exons3
Model size699
Cds size699
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig55717.12999.1prot_H-elongata_contig55717.12999.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig55717 1276..2467 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930908.2645705-CDS-H-elongata_contig55717:1275..14941622930908.2645705-CDS-H-elongata_contig55717:1275..1494Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig55717 1276..1494 +
1691679620.162139-CDS-H-elongata_contig55717:1275..14941691679620.162139-CDS-H-elongata_contig55717:1275..1494Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig55717 1276..1494 +
1622930908.2808096-CDS-H-elongata_contig55717:1749..19761622930908.2808096-CDS-H-elongata_contig55717:1749..1976Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig55717 1750..1976 +
1691679620.1785285-CDS-H-elongata_contig55717:1749..19761691679620.1785285-CDS-H-elongata_contig55717:1749..1976Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig55717 1750..1976 +
1622930908.2972634-CDS-H-elongata_contig55717:2214..24671622930908.2972634-CDS-H-elongata_contig55717:2214..2467Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig55717 2215..2467 +
1691679620.188689-CDS-H-elongata_contig55717:2214..24671691679620.188689-CDS-H-elongata_contig55717:2214..2467Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig55717 2215..2467 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig55717.12999.1

>prot_H-elongata_contig55717.12999.1 ID=prot_H-elongata_contig55717.12999.1|Name=mRNA_H-elongata_contig55717.12999.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=233bp
PRRYLFTSVFFLLCTRLKTSPSLLYQAGGNDALALLLTVTTNLLGVLTVP
FFVKAVVKAGDAEIDAVDLLVKLIITVLVPLIIGKIVREAVPGTKAWVKR
WKLYLSLTNNFMIIMVVWQTLSRGQDDITSVAFEQILSVVAAGIALHAIY
LSINYTVCRFVLRLERREFKAVVLMSSQKTLPVSVTVIAFLGGVGEEGLM
TIPCIIGHLSQLFIDAYISTRWAREVESGGEN*
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mRNA from alignment at H-elongata_contig55717:1276..2467+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig55717.12999.1 ID=mRNA_H-elongata_contig55717.12999.1|Name=mRNA_H-elongata_contig55717.12999.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1192bp|location=Sequence derived from alignment at H-elongata_contig55717:1276..2467+ (Himanthalia elongata Himel1 dioecious)
CCTCGACGATACTTGTTCACATCGGTCTTCTTTCTTTTGTGTACACGGTT AAAAACCTCCCCGTCCTTGCTTTACCAGGCTGGCGGTAATGATGCCCTCG CGCTGCTGCTGACAGTGACGACCAATCTCCTCGGGGTCCTCACCGTACCG TTCTTCGTCAAGGCAGTAGTGAAGGCTGGAGATGCCGAAATCGACGCGGT TGACCTTCTGGTGAAGTTGGTGAGACACGACCATCGGCAGGCCGAAATCA ACTATGGGGGGGGGGATTGTCGCAATGCCCGTCTGTGCGGTAGCATGTGT ACCGTAGATCGAGATTGATGCCGTTCTAAGAGACGATCGTGGCGCACGGG GATTGTTAACAAGGTCCGCCATGCAGTGGCAACATTGAAATTAACTGAAT ATTCGAATCGAATCGAATCGAATCGAATCAAATCGAAAGCCCGTCCATCT TTCTATCGTTATCCGTTATCTCAGATCATCACCGTCTTGGTGCCTCTAAT AATCGGGAAAATCGTTCGAGAGGCCGTGCCGGGAACAAAAGCGTGGGTCA AGCGATGGAAATTGTACCTGAGCCTCACGAATAACTTCATGATCATTATG GTTGTGTGGCAGACACTCAGCAGGGGCCAGGACGATATTACCTCAGTGGC GTTCGAGCAGATCTTGTCTGTCGTCGCCGCGGGTATCGCACTCCACGCCA TGTAAGCAAGGGGAGTTACAGCTATGATCGGTTGTTACGAAGGTAGACAG GCGCACGGGAGAGGGCATATAATTGTCAGTCCTGATGCGAGCACATGTGA GGGGAATATAATTTCCACGACACTAGACAATTACCTCGGTATATCTCATG TTATCGGGCATTGCTTCGCTTCATCGGTCTCTATTTCGTTTCGCCCGTTA TCATCTACCTTCTCGTTCTCTCCCCAACCAAAACCACAGCTACCTCAGCA TTAACTACACGGTGTGTCGCTTTGTGCTTCGGCTCGAACGTCGGGAGTTT AAGGCAGTCGTGCTCATGAGCTCGCAGAAGACTCTACCGGTATCAGTCAC CGTGATCGCGTTCCTTGGGGGCGTGGGAGAAGAGGGACTCATGACGATAC CATGCATCATCGGGCACTTATCTCAGCTGTTCATAGACGCCTACATATCG ACGAGGTGGGCGAGAGAGGTAGAATCTGGCGGAGAGAATTAA
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Coding sequence (CDS) from alignment at H-elongata_contig55717:1276..2467+

>mRNA_H-elongata_contig55717.12999.1 ID=mRNA_H-elongata_contig55717.12999.1|Name=mRNA_H-elongata_contig55717.12999.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1398bp|location=Sequence derived from alignment at H-elongata_contig55717:1276..2467+ (Himanthalia elongata Himel1 dioecious)
CCTCGACGATACTTGTTCACATCGGTCTTCTTTCTTTTGTGTACACGGTT
AAAAACCTCCCCGTCCTTGCTTTACCAGGCTGGCGGTAATGATGCCCTCG
CGCTGCTGCTGACAGTGACGACCAATCTCCTCGGGGTCCTCACCGTACCG
TTCTTCGTCAAGGCAGTAGTGAAGGCTGGAGATGCCGAAATCGACGCGGT
TGACCTTCTGGTGAAGTTGCCTCGACGATACTTGTTCACATCGGTCTTCT
TTCTTTTGTGTACACGGTTAAAAACCTCCCCGTCCTTGCTTTACCAGGCT
GGCGGTAATGATGCCCTCGCGCTGCTGCTGACAGTGACGACCAATCTCCT
CGGGGTCCTCACCGTACCGTTCTTCGTCAAGGCAGTAGTGAAGGCTGGAG
ATGCCGAAATCGACGCGGTTGACCTTCTGGTGAAGTTGATCATCACCGTC
TTGGTGCCTCTAATAATCGGGAAAATCGTTCGAGAGGCCGTGCCGGGAAC
AAAAGCGTGGGTCAAGCGATGGAAATTGTACCTGAGCCTCACGAATAACT
TCATGATCATTATGGTTGTGTGGCAGACACTCAGCAGGGGCCAGGACGAT
ATTACCTCAGTGGCGTTCGAGCAGATCTTGTCTGTCGTCGCCGCGGGTAT
CGCACTCCACGCCATATCATCACCGTCTTGGTGCCTCTAATAATCGGGAA
AATCGTTCGAGAGGCCGTGCCGGGAACAAAAGCGTGGGTCAAGCGATGGA
AATTGTACCTGAGCCTCACGAATAACTTCATGATCATTATGGTTGTGTGG
CAGACACTCAGCAGGGGCCAGGACGATATTACCTCAGTGGCGTTCGAGCA
GATCTTGTCTGTCGTCGCCGCGGGTATCGCACTCCACGCCATCTACCTCA
GCATTAACTACACGGTGTGTCGCTTTGTGCTTCGGCTCGAACGTCGGGAG
TTTAAGGCAGTCGTGCTCATGAGCTCGCAGAAGACTCTACCGGTATCAGT
CACCGTGATCGCGTTCCTTGGGGGCGTGGGAGAAGAGGGACTCATGACGA
TACCATGCATCATCGGGCACTTATCTCAGCTGTTCATAGACGCCTACATA
TCGACGAGGTGGGCGAGAGAGGTAGAATCTGGCGGAGAGAATTAACTACC
TCAGCATTAACTACACGGTGTGTCGCTTTGTGCTTCGGCTCGAACGTCGG
GAGTTTAAGGCAGTCGTGCTCATGAGCTCGCAGAAGACTCTACCGGTATC
AGTCACCGTGATCGCGTTCCTTGGGGGCGTGGGAGAAGAGGGACTCATGA
CGATACCATGCATCATCGGGCACTTATCTCAGCTGTTCATAGACGCCTAC
ATATCGACGAGGTGGGCGAGAGAGGTAGAATCTGGCGGAGAGAATTAA
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