mRNA_H-elongata_contig55598.12982.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig55598.12982.1
Unique NamemRNA_H-elongata_contig55598.12982.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig55598.12982.1 vs. uniprot
Match: D7FM46_ECTSI (Putative Leucine Rich Repeat Protein Kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM46_ECTSI)

HSP 1 Score: 262 bits (670), Expect = 2.180e-78
Identity = 145/250 (58.00%), Postives = 165/250 (66.00%), Query Frame = 1 
Query:    1 SFGVLIHEVLTQRVPFAGKSVAKVITAVVAKCHRPGYLENEEETMPTGLVKLADVCWTQEPAARPTSLKTVVTELGHIVNAMGGDPRVPLHHAT-GEEAAARPLSKEATSSEGGIS--PDERRIKELEEELRALKMRQRGGGEGTSSKMSSFASEDDGPIIGIPEGEAGGXXXXXXXXACLRTALRALYTATQGPAWRERQGWETNDPDLSSWYGVICGYGGHVMELKLPSNNLHGQVSRELDCLSYLRT 741
            SFG+L+HEVLTQRVPFAGK+VAKVITAVVAK HRPGYLENEE   P GL KL DVCWTQ+PAARPTSL  +VTELGHI+NA+GGDPR   H  T GE A + P+ +        +S    ERRI +LE+ELRALKM++ G G G                     GE              R ALRALYTATQGP W E+ GWETNDP+LS WYGV+CG GG V  L L SNNL GQ+ REL CLS L+T
Sbjct:  321 SFGILVHEVLTQRVPFAGKNVAKVITAVVAKGHRPGYLENEEAQFPPGLTKLVDVCWTQDPAARPTSLNGIVTELGHILNALGGDPRPQPHTQTAGEAAPSTPIEQNTPGRIPRVSMTEQERRIHDLEQELRALKMQKGGDGGGRGGS-----------------GE--------------RKALRALYTATQGPGWYEQTGWETNDPNLSKWYGVVCGEGGRVTSLHLRSNNLQGQLPRELGCLSRLKT 539
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BLAST of mRNA_H-elongata_contig55598.12982.1 vs. uniprot
Match: A0A6H5L5H1_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5H1_9PHAE)

HSP 1 Score: 255 bits (652), Expect = 1.190e-74
Identity = 146/277 (52.71%), Postives = 171/277 (61.73%), Query Frame = 1 
Query:    1 SFGVLIHEVLTQRVPFAGKSVAKVITAVVAKCHRPGYLENEEETMPTGLVKLADVCWTQEPAARPTSLKTVVTELGHIVNAMGGDPRV-PLHHATGEEAAARPLSKEATS-SEGGISPDERRIKELEEELRALKMRQRGGGEGTSSKMS--------------------------SFASEDDGPIIGIPE-GEAGGXXXXXXXXACLRTALRALYTATQGPAWRERQGWETNDPDLSSWYGVICGYGGHVMELKLPSNNLHGQVSRELDCLSYLRTL 744
            SFGVL+HEVLTQRVPFAGK++AKVITAVVAK HRPGYLENEE   P GL KL DVCWTQ+PAARP+SL  +VTELGHI+NA+GGDPR  P     GE A + P+ + +       ++  ERRI +LE+ELRALKM++   G                                  S  S   G     P  GE GG           R ALRALYT+TQGP W E+ GWETNDP+LS WYGV+CG GG V  L L SNNL GQ+ REL CLS+L+TL
Sbjct:  530 SFGVLVHEVLTQRVPFAGKNIAKVITAVVAKGHRPGYLENEEAQFPPGLTKLVDVCWTQDPAARPSSLNVIVTELGHILNALGGDPRPRPYTQTAGEAAPSMPMEQNSGRIPRVSMTEQERRIHDLEQELRALKMQKEADGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVSRRSSGVGRASMFPSAGEGGGSEE--------RKALRALYTSTQGPGWYEQTGWETNDPNLSKWYGVVCGEGGRVTSLHLRSNNLQGQLPRELGCLSHLKTL 798
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BLAST of mRNA_H-elongata_contig55598.12982.1 vs. uniprot
Match: UPI0012FF6ACA (hypothetical protein n=1 Tax=Marinicella sediminis TaxID=1792834 RepID=UPI0012FF6ACA)

HSP 1 Score: 75.1 bits (183), Expect = 1.640e-12
Identity = 34/79 (43.04%), Postives = 47/79 (59.49%), Query Frame = 1 
Query:  535 RTALRALYTATQGPAWRERQGWETNDPDLSSWYGVICGYGGHVMELKLPSNNLHGQVSRELDCLSYLRTLDLSDNMLEG 771
            R AL  L+ AT GP W  +Q W  NDP +  W+GV C    +++ L LP N L+GQ+   +  LS+L TLD+S+N L  
Sbjct:   31 RQALVDLHNATGGPNWLNQQNWLDNDPCMDEWFGVQCDGDDNIIGLSLPVNGLNGQIPANITQLSFLETLDISENYLSA 109
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BLAST of mRNA_H-elongata_contig55598.12982.1 vs. uniprot
Match: A0A7X4EIL7_9BACT (BIG2 domain-containing protein n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A7X4EIL7_9BACT)

HSP 1 Score: 70.9 bits (172), Expect = 2.750e-10
Identity = 33/75 (44.00%), Postives = 50/75 (66.67%), Query Frame = 1 
Query:  535 RTALRALYTATQGPAWRERQGWETNDPDLSSWYGVICGYGGHVMELKLPSNNLHGQVSRELDCLSYLRTLDLSDN 759
            R AL ALY AT GP WR +  W +++P +++W+GV+      V+EL+L  N+L G++  EL  LS+LR L L++N
Sbjct:  123 RVALTALYDATDGPGWRSKTNWLSDEP-MATWHGVVGNVYDRVIELRLQDNDLSGEIPPELGQLSFLRELVLNEN 196
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BLAST of mRNA_H-elongata_contig55598.12982.1 vs. uniprot
Match: A0A8J6BY20_9EUKA (Cyst wall protein, type 1B n=1 Tax=Carpediemonas membranifera TaxID=201153 RepID=A0A8J6BY20_9EUKA)

HSP 1 Score: 67.4 bits (163), Expect = 6.060e-10
Identity = 27/67 (40.30%), Postives = 43/67 (64.18%), Query Frame = 1 
Query:  541 ALRALYTATQGPAWRERQGWETNDPDLSSWYGVICGYGGHVMELKLPSNNLHGQVSRELDCLSYLRT 741
            AL  LYTA  G  W +  GW T D  + +WYG+ C   G+V +++LP+NNL G+++ ++ C  YL++
Sbjct:   27 ALMNLYTALGGDFWTDNSGWNTGD--VCTWYGIGCNLDGYVTDIRLPANNLTGELTSDIGCFPYLKS 91
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BLAST of mRNA_H-elongata_contig55598.12982.1 vs. uniprot
Match: A0A8J6AXN5_9EUKA (Cyst wall protein, type 1B n=4 Tax=Carpediemonas membranifera TaxID=201153 RepID=A0A8J6AXN5_9EUKA)

HSP 1 Score: 67.4 bits (163), Expect = 1.140e-9
Identity = 27/67 (40.30%), Postives = 43/67 (64.18%), Query Frame = 1 
Query:  541 ALRALYTATQGPAWRERQGWETNDPDLSSWYGVICGYGGHVMELKLPSNNLHGQVSRELDCLSYLRT 741
            AL  LYTA  G  W +  GW T D  + +WYG+ C   G+V +++LP+NNL G+++ ++ C  YL++
Sbjct:   27 ALMNLYTALGGDFWTDNSGWNTGD--VCTWYGIGCNLDGYVTDIRLPANNLTGELTSDIGCFPYLKS 91
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BLAST of mRNA_H-elongata_contig55598.12982.1 vs. uniprot
Match: A0A6N8V7X6_9BACT (Uncharacterized protein n=2 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A6N8V7X6_9BACT)

HSP 1 Score: 68.6 bits (166), Expect = 1.710e-9
Identity = 32/73 (43.84%), Postives = 49/73 (67.12%), Query Frame = 1 
Query:  541 ALRALYTATQGPAWRERQGWETNDPDLSSWYGVICGYGGHVMELKLPSNNLHGQVSRELDCLSYLRTLDLSDN 759
            AL+ALY AT GP WR +  W +++P +++W+GV+      V+EL L  N+L G++  EL  LS+LR L L++N
Sbjct:  224 ALKALYDATDGPGWRSKTNWLSDEP-IATWHGVVGNTYDRVVELHLQDNDLSGEIPPELGQLSFLRELVLNEN 295
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BLAST of mRNA_H-elongata_contig55598.12982.1 vs. uniprot
Match: A0A6B1D1G4_9CHLR (Fibronectin type-III domain-containing protein (Fragment) n=1 Tax=Caldilineaceae bacterium SB0661_bin_32 TaxID=2605255 RepID=A0A6B1D1G4_9CHLR)

HSP 1 Score: 66.2 bits (160), Expect = 1.060e-8
Identity = 35/77 (45.45%), Postives = 46/77 (59.74%), Query Frame = 1 
Query:  535 RTALRALYTATQGPAWRERQGWETNDPDLSSWYGVICGYGGHVMELKLPSNNLHGQVSRELDCLSYLRTLDLSDNML 765
            R AL ALY AT G  W+++  W ++ P LS W+GV    GGHV  LKL  N L+G +  +L  L+YL  L L+ N L
Sbjct:  525 RAALVALYRATGGDGWKQKDNWLSDRP-LSDWHGVTTDAGGHVTRLKLGGNQLNGTLP-DLSALTYLEELSLTGNHL 599
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BLAST of mRNA_H-elongata_contig55598.12982.1 vs. uniprot
Match: A0A6I4ZRU8_9CHLR (Uncharacterized protein (Fragment) n=1 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A6I4ZRU8_9CHLR)

HSP 1 Score: 65.1 bits (157), Expect = 2.260e-8
Identity = 38/85 (44.71%), Postives = 45/85 (52.94%), Query Frame = 1 
Query:  535 RTALRALYTATQGPAWRERQGWETNDPDLSSWYGVICGYGGHVMELK------LPSNNLHGQVSRELDCLSYLRTLDLSDNMLEG 771
            RTAL ALY AT GP W     W ++ P L  WYGV  G  G V EL       +  N L G++  ELD L+ L+ L LS N L G
Sbjct:  427 RTALVALYNATDGPNWVFNANWLSDRP-LDEWYGVTTGANGRVTELNVSGGGAITGNGLQGRIPAELDSLADLQRLYLSGNRLTG 510
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BLAST of mRNA_H-elongata_contig55598.12982.1 vs. uniprot
Match: A0A7X3QKG9_9CHLR (Uncharacterized protein (Fragment) n=1 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A7X3QKG9_9CHLR)

HSP 1 Score: 65.1 bits (157), Expect = 2.740e-8
Identity = 38/85 (44.71%), Postives = 45/85 (52.94%), Query Frame = 1 
Query:  535 RTALRALYTATQGPAWRERQGWETNDPDLSSWYGVICGYGGHVMELK------LPSNNLHGQVSRELDCLSYLRTLDLSDNMLEG 771
            RTAL ALY AT GP W     W ++ P L  WYGV  G  G V EL       +  N L G++  ELD L+ L+ L LS N L G
Sbjct:  427 RTALVALYNATDGPNWVFNANWLSDRP-LDEWYGVTTGANGRVTELNVSGGGAITGNGLQGRIPAELDSLADLQRLYLSGNRLTG 510
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig55598.12982.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FM46_ECTSI2.180e-7858.00Putative Leucine Rich Repeat Protein Kinase n=1 Ta... [more]
A0A6H5L5H1_9PHAE1.190e-7452.71Protein kinase domain-containing protein n=1 Tax=E... [more]
UPI0012FF6ACA1.640e-1243.04hypothetical protein n=1 Tax=Marinicella sediminis... [more]
A0A7X4EIL7_9BACT2.750e-1044.00BIG2 domain-containing protein n=1 Tax=Gemmatimona... [more]
A0A8J6BY20_9EUKA6.060e-1040.30Cyst wall protein, type 1B n=1 Tax=Carpediemonas m... [more]
A0A8J6AXN5_9EUKA1.140e-940.30Cyst wall protein, type 1B n=4 Tax=Carpediemonas m... [more]
A0A6N8V7X6_9BACT1.710e-943.84Uncharacterized protein n=2 Tax=Gemmatimonadetes b... [more]
A0A6B1D1G4_9CHLR1.060e-845.45Fibronectin type-III domain-containing protein (Fr... [more]
A0A6I4ZRU8_9CHLR2.260e-844.71Uncharacterized protein (Fragment) n=1 Tax=Dehaloc... [more]
A0A7X3QKG9_9CHLR2.740e-844.71Uncharacterized protein (Fragment) n=1 Tax=Dehaloc... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig55598contigH-elongata_contig55598:274..2876 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score75.9
Seed ortholog evalue3.1e-11
Seed eggNOG ortholog115417.EPrPW00000019393
EggNOG free text desc.Leucine Rich Repeat
EggNOG OGs1MGM6@121069,2S3S0@2759,COG4886@1
Ec32 ortholog descriptionPutative Leucine Rich Repeat Protein Kinase
Ec32 orthologEc-01_010620.1
COG Functional cat.S
Best tax levelPythiales
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons6
Model size771
Cds size771
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig55598.12982.1prot_H-elongata_contig55598.12982.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig55598 274..2876 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930906.2309825-CDS-H-elongata_contig55598:273..3471622930906.2309825-CDS-H-elongata_contig55598:273..347Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig55598 274..347 -
1691679619.4081655-CDS-H-elongata_contig55598:273..3471691679619.4081655-CDS-H-elongata_contig55598:273..347Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig55598 274..347 -
1622930906.254138-CDS-H-elongata_contig55598:721..8841622930906.254138-CDS-H-elongata_contig55598:721..884Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig55598 722..884 -
1691679619.41911-CDS-H-elongata_contig55598:721..8841691679619.41911-CDS-H-elongata_contig55598:721..884Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig55598 722..884 -
1622930906.2741613-CDS-H-elongata_contig55598:1252..15101622930906.2741613-CDS-H-elongata_contig55598:1252..1510Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig55598 1253..1510 -
1691679619.427893-CDS-H-elongata_contig55598:1252..15101691679619.427893-CDS-H-elongata_contig55598:1252..1510Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig55598 1253..1510 -
1622930906.289153-CDS-H-elongata_contig55598:1665..17551622930906.289153-CDS-H-elongata_contig55598:1665..1755Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig55598 1666..1755 -
1691679619.43723-CDS-H-elongata_contig55598:1665..17551691679619.43723-CDS-H-elongata_contig55598:1665..1755Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig55598 1666..1755 -
1622930906.3085442-CDS-H-elongata_contig55598:2139..22561622930906.3085442-CDS-H-elongata_contig55598:2139..2256Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig55598 2140..2256 -
1691679619.4474497-CDS-H-elongata_contig55598:2139..22561691679619.4474497-CDS-H-elongata_contig55598:2139..2256Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig55598 2140..2256 -
1622930906.3267274-CDS-H-elongata_contig55598:2807..28761622930906.3267274-CDS-H-elongata_contig55598:2807..2876Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig55598 2808..2876 -
1691679619.4582956-CDS-H-elongata_contig55598:2807..28761691679619.4582956-CDS-H-elongata_contig55598:2807..2876Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig55598 2808..2876 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig55598.12982.1

>prot_H-elongata_contig55598.12982.1 ID=prot_H-elongata_contig55598.12982.1|Name=mRNA_H-elongata_contig55598.12982.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=257bp
SFGVLIHEVLTQRVPFAGKSVAKVITAVVAKCHRPGYLENEEETMPTGLV
KLADVCWTQEPAARPTSLKTVVTELGHIVNAMGGDPRVPLHHATGEEAAA
RPLSKEATSSEGGISPDERRIKELEEELRALKMRQRGGGEGTSSKMSSFA
SEDDGPIIGIPEGEAGGGGEGEGEGACLRTALRALYTATQGPAWRERQGW
ETNDPDLSSWYGVICGYGGHVMELKLPSNNLHGQVSRELDCLSYLRTLDL
SDNMLEG
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mRNA from alignment at H-elongata_contig55598:274..2876-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig55598.12982.1 ID=mRNA_H-elongata_contig55598.12982.1|Name=mRNA_H-elongata_contig55598.12982.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2603bp|location=Sequence derived from alignment at H-elongata_contig55598:274..2876- (Himanthalia elongata Himel1 dioecious)
AGCTTCGGCGTGTTGATCCACGAGGTGCTGACCCAGCGAGTGCCGTTTGC
TGGGAAGAGCGTCGCGAAGGTAAGATCCTAGCGGAGTGCACTATACTATA
GTACTGTTAGCGAAGGAGGGTGTAATAAGCTTGACATTGACTGGACGGGA
CAGTACGGTACGGGATGAAATTTGTATGTCTTGTCTGCTTGTTCGTCTGT
CCGTGCACACGTCTTTTGGCCACGTGGACGTTAGCAGTAGACATGGTATA
CTATGACAGATCACAACATACTATGCATATTGTACTGTTGAGTAGACATG
GCATACATGCCCACTGTACTGTTATAAAACCCTTTCATGTCGTGACACGC
GGAAGCATGATGGTTGAGTGTTTGTACGTAGATCTATGTGTGTATGTGTG
TATTTGTATGTACATGTAAATATGTGTAATTAATGCGTTTATTGTGTGCG
TATGGCGTGTGTGCTCGTTATACGTGTGATGTATATATATATTTCCCTCT
CCACCCATGTTGGTGCGAGAGTTGTTCACTCTGGTACATGACGGATATAA
TAAAGCAATTTAATACAGGATTTTCTTGATCCCCCCTCCCCTTGCCGTAT
TGCCGTATTGCCCCGGTAAGGTGATCACGGCGGTGGTAGCCAAGTGCCAC
CGCCCAGGGTATCTCGAAAACGAGGAAGAAACGATGCCCACAGGCCTCGT
CAAGCTCGCCGACGTTTGCTGGACCCAAGAGCCGGCGGTGAGGTTTCATC
TTCGTGGTTACAGTCGTCATAGTCTTAGTGTTCGTTACGCTAGGCTGGTG
GTGGGGCGGGGGGTGGGGTGGGTGGGGGGGGGGGAGGTGCTCCCTACTGT
ACAATGTTTCAAAGGATACATAGCGTTACGATGCGATCCATCCCAGAACT
TCGTGCTGCCTGTCTACCGGTTGATCCTTCGATAAGGTGGTGGTACAGAG
GAGTAGTAGCTGTGGTGCTTTAAAAAAGAAGTGGGAAGTGCCTCTTTATT
TCGAGTTATTTCAGGATGGTCTATCTCGTGGCTGCCAAGTGGCCGGCATG
ATCCTCTATAATAATTGATGATTACGGACATGTGATGATGATGCTGCTGC
TGGGGTTGGCGGGCGATGCAGGCGCGACCCACGAGCTTGAAGACGGTTGT
GACCGAGCTGGGCCACATCGTGAACGCCATGGGAGGAGACCCTCGCGTTC
CGCTGCACCATGTAGGTCATGTTGGAAGTTTTTATGTCGTGATGGTATAG
CACACACGCGATGAACGGATGTAAACGAAAATAAAAAAGAGAACCGAAGA
AAACACGAAACGTCGAAACCAAACAAAAACAAACAAAAAAACGTCGAAGC
GCAATAAAACTAACAGGCAACGGGCGAGGAGGCGGCGGCACGGCCTCTGA
GCAAGGAAGCGACCTCGAGCGAGGGCGGGATAAGCCCTGATGAGCGGAGG
ATAAAAGAGCTAGAGGAGGAGTTGCGCGCCTTGAAGATGCGACAGCGAGG
GGGTGGGGAGGGGACGTCGAGCAAGATGTCTTCTTTTGCTTCGGAGGATG
ACGGACCGATAATCGGAATTCCTGAGGGTGAGGCTGGAGGGGGGGGTGAG
GGTGAGGGTGAGGGTGCATGTTTGGTCAAATTATATCTTGTCAATTTGTG
TATAAAACTGAAACAGCGACAAAAGTAAAGGGCATGGAAGAAATATTAAT
TATGTGTGCGCTGATTAAGAGAGAGAGATGTAAGCGATGCGCGCGACTTT
CCCCCCATCAAAATTCAGAAGTACGTGGATATCCGCAAGCTCCCAGTAGG
CGGCAGTACCCTGGATTACCTAGGAGCTACATTACCTTCAGAGGTCCCCC
CAACCATCCCCTACTGCCCCTCCCCTCCTTACATTCCTTTGCCTTATAGG
GTTGTTTTTTTGTCAACACACGCTTGCGCTTTCAAACACTTCCCCACCTC
CCAAACCCCTCCTCCATATTTCCCTCCTCTTACCCTGAAGAGCGTACGGC
GCTGAGAGCATTGTACACGGCGACACAGGGCCCTGCCTGGCGCGAAAGAC
AGGGGTGGGAAACGAACGACCCGGATCTGTCGAGCTGGTACGGGGTGATC
TGCGGATATGGGGGGCACGTGATGGAGCTGAAACTCCCGTCGAACAACCT
TCATGGTAAGGAGAAGAGAGAACAGGGAAGGAAAATAAAAGAAAACGTAA
TACTGGTATATGGAAGATAGAAGAGAGGAAGATGAGAATTGTCGTCAATG
GGCTGTGTTAGTCTTTTAGTTGCCGGGATAGTCCTGCCGTGATAGGGGAT
AGGGGATGGACAGTGTGACCAGTCCTGCTGTGTGGATAGTATCGGAAAGA
GGGGAGGGGGATCCGTCCGTTCGTCCGTCCGTCCCCACCTTTCAACTTCC
TATCGATATATTTGTTGGTATAATCCGCTGTGTATTGTGTTGTGGGCTTG
ATGGGCTTGATTGAACCGGACTTGATTGGATTCGACTGGACTGAACCGGA
CCGGATTGGACTGGATTGGACGTCCGCAGGCCAGGTGTCACGAGAGCTGG
ACTGTCTGTCTTATTTGAGGACGCTTGATCTGTCAGATAATATGCTCGAA
GGT
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Coding sequence (CDS) from alignment at H-elongata_contig55598:274..2876-

>mRNA_H-elongata_contig55598.12982.1 ID=mRNA_H-elongata_contig55598.12982.1|Name=mRNA_H-elongata_contig55598.12982.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1542bp|location=Sequence derived from alignment at H-elongata_contig55598:274..2876- (Himanthalia elongata Himel1 dioecious)
AGCTTCGGCGTGTTGATCCACGAGGTGCTGACCCAGCGAGTGCCGTTTGC
TGGGAAGAGCGTCGCGAAGAGCTTCGGCGTGTTGATCCACGAGGTGCTGA
CCCAGCGAGTGCCGTTTGCTGGGAAGAGCGTCGCGAAGGTGATCACGGCG
GTGGTAGCCAAGTGCCACCGCCCAGGGTATCTCGAAAACGAGGAAGAAAC
GATGCCCACAGGCCTCGTCAAGCTCGCCGACGTTTGCTGGACCCAAGAGC
CGGCGGTGATCACGGCGGTGGTAGCCAAGTGCCACCGCCCAGGGTATCTC
GAAAACGAGGAAGAAACGATGCCCACAGGCCTCGTCAAGCTCGCCGACGT
TTGCTGGACCCAAGAGCCGGCGGCGCGACCCACGAGCTTGAAGACGGTTG
TGACCGAGCTGGGCCACATCGTGAACGCCATGGGAGGAGACCCTCGCGTT
CCGCTGCACCATGCGCGACCCACGAGCTTGAAGACGGTTGTGACCGAGCT
GGGCCACATCGTGAACGCCATGGGAGGAGACCCTCGCGTTCCGCTGCACC
ATGCAACGGGCGAGGAGGCGGCGGCACGGCCTCTGAGCAAGGAAGCGACC
TCGAGCGAGGGCGGGATAAGCCCTGATGAGCGGAGGATAAAAGAGCTAGA
GGAGGAGTTGCGCGCCTTGAAGATGCGACAGCGAGGGGGTGGGGAGGGGA
CGTCGAGCAAGATGTCTTCTTTTGCTTCGGAGGATGACGGACCGATAATC
GGAATTCCTGAGGGTGAGGCTGGAGGGGGGGGTGAGGGTGAGGGTGAGGG
TGCATGTTTGGCAACGGGCGAGGAGGCGGCGGCACGGCCTCTGAGCAAGG
AAGCGACCTCGAGCGAGGGCGGGATAAGCCCTGATGAGCGGAGGATAAAA
GAGCTAGAGGAGGAGTTGCGCGCCTTGAAGATGCGACAGCGAGGGGGTGG
GGAGGGGACGTCGAGCAAGATGTCTTCTTTTGCTTCGGAGGATGACGGAC
CGATAATCGGAATTCCTGAGGGTGAGGCTGGAGGGGGGGGTGAGGGTGAG
GGTGAGGGTGCATGTTTGCGTACGGCGCTGAGAGCATTGTACACGGCGAC
ACAGGGCCCTGCCTGGCGCGAAAGACAGGGGTGGGAAACGAACGACCCGG
ATCTGTCGAGCTGGTACGGGGTGATCTGCGGATATGGGGGGCACGTGATG
GAGCTGAAACTCCCGTCGAACAACCTTCATGCGTACGGCGCTGAGAGCAT
TGTACACGGCGACACAGGGCCCTGCCTGGCGCGAAAGACAGGGGTGGGAA
ACGAACGACCCGGATCTGTCGAGCTGGTACGGGGTGATCTGCGGATATGG
GGGGCACGTGATGGAGCTGAAACTCCCGTCGAACAACCTTCATGGCCAGG
TGTCACGAGAGCTGGACTGTCTGTCTTATTTGAGGACGCTTGATCTGTCA
GATAATATGCTCGAAGGTGCCAGGTGTCACGAGAGCTGGACTGTCTGTCT
TATTTGAGGACGCTTGATCTGTCAGATAATATGCTCGAAGGT
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