mRNA_H-elongata_contig55478.12963.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig55478.12963.1 vs. uniprot
Match: D8LGC2_ECTSI (Lon protease homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGC2_ECTSI) HSP 1 Score: 549 bits (1415), Expect = 2.480e-184 Identity = 280/333 (84.08%), Postives = 306/333 (91.89%), Query Frame = 1
Query: 1 GGSSEGDDMAALETRLEAAGLPSEASKVVMKDLARLKKMHPSQPEYTVVRMYLETVAELPWNRLSEETYDIRRAQIQLDRDHYGLHKARSCSDITFSLVKQRIAEYIAVRSLISDNKGSILCLVGPPGVGKTSLGRSIASALNREFQRLSLGGVHDEAEIRGHRRTYIGAMPGGIVRCLRRAGARNPVLLLDEVDKIGSNIRGGDPSAALLEVLDPEQHDSFTDHYLNVPFDLSSVLFVATANKVDTIPEALLDRLEVINIPGYTLEEKVRIAEAYLIPKQMDKNGVSTEHVMLPRSTVLRVASSYTREAGVRQLERELAAICRHVALKV-IW 996
GGSSEGD++AALE ++EAAGLP EASKV +DL+RLK+M SQPEYTV+R YLETV+ELPWNR+SEETYDIRRAQ QLD+DHYGL+K VKQRI EYIAVRSL+SD+KGSILCLVGPPGVGKTSLGRSIA+ALNR+FQRLSLGGVHDEAEIRGHRRTYIGAMPGGIVRCLRRAG RNPV+LLDEVDKIGSN+RGGDPSAALLEVLDPEQ+DSFTDHY+NVPFDLSSVLFVATANKVD IPE LLDRLEVI+IPGYTLEEKV+IAEAYLIPKQM KNGV EH++LPRSTVLRVASSYTREAGVRQLERELAA+CRHVALKV +W
Sbjct: 307 GGSSEGDEVAALEAKIEAAGLPPEASKVAKRDLSRLKRMQASQPEYTVIRTYLETVSELPWNRVSEETYDIRRAQRQLDKDHYGLNK-----------VKQRIVEYIAVRSLLSDSKGSILCLVGPPGVGKTSLGRSIAAALNRKFQRLSLGGVHDEAEIRGHRRTYIGAMPGGIVRCLRRAGTRNPVMLLDEVDKIGSNVRGGDPSAALLEVLDPEQNDSFTDHYVNVPFDLSSVLFVATANKVDAIPEPLLDRLEVIHIPGYTLEEKVKIAEAYLIPKQMKKNGVGAEHMLLPRSTVLRVASSYTREAGVRQLERELAAVCRHVALKVGVW 628
BLAST of mRNA_H-elongata_contig55478.12963.1 vs. uniprot
Match: A0A4D9CQU2_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CQU2_9STRA) HSP 1 Score: 417 bits (1071), Expect = 1.330e-134 Identity = 214/344 (62.21%), Postives = 260/344 (75.58%), Query Frame = 1
Query: 10 SEGDDMAALETRLEAAGLPSEASKVVMKDLARLKKMHPSQPEYTVVRMYLETVAELPW-----------------NRLSEETYDIRRAQIQLDRDHYGLHKARSCSDITFSLVKQRIAEYIAVRSLISDNKGSILCLVGPPGVGKTSLGRSIASALNREFQRLSLGGVHDEAEIRGHRRTYIGAMPGGIVRCLRRAGARNPVLLLDEVDKIGSNIRGGDPSAALLEVLDPEQHDSFTDHYLNVPFDLSSVLFVATANKVDTIPEALLDRLEVINIPGYTLEEKVRIAEAYLIPKQMDKNGVSTEHVMLPRSTVLRVASSYTREAGVRQLERELAAICRHVALKV 990
SE DDM L RL+A LP + K+L RLK+M PSQPE++VVR YLE + +LPW + + E +D+R + QLDRDH+GL K VK+RI EYIAVRSL KG ILCLVGPPGVGKTSLGRSIA+AL R FQRLSLGGVHDEAEIRGHRRTYIGA+PG I++C+++AG +P+ LLDEVDK+GS+IRGGDPSAA+LEVLDPEQ+ +FTDHYLN+P+DLS V F+ATAN+ DTIPE LLDR+EVIN+PGYT+EEKV IAE YLIPKQ+ NG+S EHV++ V +A+ YTREAGVRQ+ERELAA+CRHVA++V
Sbjct: 296 SEEDDMTELANRLKAKPLPRDVRVAAEKELRRLKRMQPSQPEHSVVRTYLEWILDLPWFVKDDENEAGDTDTREPSNVEEAFFDVRAVEAQLDRDHHGLGK-----------VKRRILEYIAVRSLTRSLKGPILCLVGPPGVGKTSLGRSIATALGRRFQRLSLGGVHDEAEIRGHRRTYIGALPGNILQCMKKAGTPDPLFLLDEVDKLGSSIRGGDPSAAMLEVLDPEQNSTFTDHYLNLPYDLSRVFFLATANQTDTIPEPLLDRMEVINLPGYTIEEKVFIAEQYLIPKQLAANGLSPEHVIVTPRAVQSIATGYTREAGVRQIERELAAVCRHVAMQV 628
BLAST of mRNA_H-elongata_contig55478.12963.1 vs. uniprot
Match: A0A2I1FU25_9GLOM (ATP-dependent protease La n=3 Tax=Rhizophagus TaxID=1129544 RepID=A0A2I1FU25_9GLOM) HSP 1 Score: 382 bits (982), Expect = 5.930e-126 Identity = 194/327 (59.33%), Postives = 246/327 (75.23%), Query Frame = 1
Query: 7 SSEGDDMAALETRLEAAGLPSEASKVVMKDLARLKKMHPSQPEYTVVRMYLETVAELPWNRLSEETYDIRRAQIQLDRDHYGLHKARSCSDITFSLVKQRIAEYIAVRSLISDNKGSILCLVGPPGVGKTSLGRSIASALNREFQRLSLGGVHDEAEIRGHRRTYIGAMPGGIVRCLRRAGARNPVLLLDEVDKIGSNIRGGDPSAALLEVLDPEQHDSFTDHYLNVPFDLSSVLFVATANKVDTIPEALLDRLEVINIPGYTLEEKVRIAEAYLIPKQMDKNGVSTEHVMLPRSTVLRVASSYTREAGVRQLERELAAICRHVALK 987
S E DD+ L R++ AGL EA+K ++L RLK+MH +Q EY VVR YLE ++E+PW++ + E DI +A+ QL+ DHYGL VK+RI EY+AV L D KG ILCL+GPPGVGKTSLG+SIASAL R+F R+SLGGV DEAEIRGHRRTYIGAMPG I + L+R GA NP+ LLDE+DK+G GDPSAALLEVLDPEQ+++F DHYLNVP DLS VLF+ATAN+VDTIP LLDR+E+INIPGYT EEK+ IA+ +L+PKQ+ +G+S + V + +L++AS YTREAGVR ERE+A++CR A++
Sbjct: 52 SHEDDDITDLTKRIKEAGLSPEANKAAQRELKRLKRMHSTQAEYQVVRTYLEWLSEIPWSKSTSEIIDIDKARQQLEDDHYGLES-----------VKKRILEYLAVLKLKGDLKGPILCLLGPPGVGKTSLGKSIASALGRKFHRISLGGVRDEAEIRGHRRTYIGAMPGLIAQGLKRVGANNPIFLLDEIDKVGHLSNHGDPSAALLEVLDPEQNNTFNDHYLNVPLDLSKVLFIATANQVDTIPAPLLDRMELINIPGYTFEEKINIAQRHLLPKQITNHGLSLDDVKMLDEVLLKIASGYTREAGVRNFEREIASVCRAKAVE 367
BLAST of mRNA_H-elongata_contig55478.12963.1 vs. uniprot
Match: A0A2R5GJ38_9STRA (Lon protease homolog n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GJ38_9STRA) HSP 1 Score: 392 bits (1007), Expect = 1.890e-125 Identity = 196/330 (59.39%), Postives = 251/330 (76.06%), Query Frame = 1
Query: 1 GGSSEGDDMAALETRLEAAGLPSEASKVVMKDLARLKKMHPSQPEYTVVRMYLETVAELPWNRLSEETYDIRRAQIQLDRDHYGLHKARSCSDITFSLVKQRIAEYIAVRSLISDNKGSILCLVGPPGVGKTSLGRSIASALNREFQRLSLGGVHDEAEIRGHRRTYIGAMPGGIVRCLRRAGARNPVLLLDEVDKIGSNIRGGDPSAALLEVLDPEQHDSFTDHYLNVPFDLSSVLFVATANKVDTIPEALLDRLEVINIPGYTLEEKVRIAEAYLIPKQMDKNGVSTEHVMLPRSTVLRVASSYTREAGVRQLERELAAICRHVALKV 990
G SE D++ ALE L LP E +V ++L RLK+M PSQPEY V+R YLE +AELPW ++S++ DI A+ QLD DH+ L + VK RI E++AVRSL +D KG ILCL GPPGVGKTSLG+S+A +L R+F+RL+LGGV DEAEIRGHRRTYIGA+PG I+ L++AG NPV+LLDE+DK+G ++RG DP++ALLEVLDPEQ+D F DHYLNVP+DLS VLF+ATAN++DTIP LLDR+EVI +PGYT EK IA +LIPKQM+++G++ +H+ S V +V SYTREAGVR L+RE+AA+CRH A+KV
Sbjct: 311 GAGSEQDEIEALEENLAGIKLPEEPRQVADRELQRLKQMQPSQPEYAVIRSYLELMAELPWGKVSKDNLDIGHARAQLDADHHALER-----------VKNRIIEFLAVRSLKNDMKGPILCLAGPPGVGKTSLGKSVAESLGRQFRRLALGGVRDEAEIRGHRRTYIGALPGNIITTLKKAGTENPVILLDEIDKLGRDVRG-DPASALLEVLDPEQNDKFVDHYLNVPYDLSKVLFIATANRLDTIPGPLLDRMEVIELPGYTQAEKHEIAIQHLIPKQMERHGIAKDHIEFTPSAVDKVIDSYTREAGVRSLDREIAALCRHAAVKV 628
BLAST of mRNA_H-elongata_contig55478.12963.1 vs. uniprot
Match: A0A507DWD9_9FUNG (Lon protease homolog 2, peroxisomal n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507DWD9_9FUNG) HSP 1 Score: 388 bits (996), Expect = 4.020e-125 Identity = 199/325 (61.23%), Postives = 249/325 (76.62%), Query Frame = 1
Query: 13 EGDDMAALETRLEAAGLPSEASKVVMKDLARLKKMHPSQPEYTVVRMYLETVAELPWNRLSEETYDIRRAQIQLDRDHYGLHKARSCSDITFSLVKQRIAEYIAVRSLISDNKGSILCLVGPPGVGKTSLGRSIASALNREFQRLSLGGVHDEAEIRGHRRTYIGAMPGGIVRCLRRAGARNPVLLLDEVDKIGSNIRGGDPSAALLEVLDPEQHDSFTDHYLNVPFDLSSVLFVATANKVDTIPEALLDRLEVINIPGYTLEEKVRIAEAYLIPKQMDKNGVSTEHVMLPRSTVLRVASSYTREAGVRQLERELAAICRHVALK 987
E D++A L TR+ A LP EASK +++ RLK+MHPS EY VVR YLE ++ELPW + SE+ DI RA+ QLD DH+GL K VK RI EY+AVR L D KG ILC +GPPGVGKTSLG+S+A+AL R+F R+SLGGV DEAEIRGHRRTYIGA+PG IV+ LRR G NPV+LLDE+DK+G + RG DPS+ALLEVLDPEQ+ +FTDHYLNV FDLS+VLFVATAN DTIP LLDR+EVI IPGYT +EK+ IAE +L+PKQ+ +G+S E + + + +L++A+ YTREAGVR LERE+ A+CR +A++
Sbjct: 303 EEDEVADLVTRIADAKLPEEASKAAGREIRRLKRMHPSMAEYQVVRTYLEWLSELPWEKQSEDVMDIARARQQLDDDHFGLEK-----------VKTRILEYLAVRKLKKDLKGPILCFLGPPGVGKTSLGKSLANALGRKFHRISLGGVRDEAEIRGHRRTYIGALPGRIVQGLRRCGVNNPVILLDEIDKLGRDSRG-DPSSALLEVLDPEQNSTFTDHYLNVAFDLSNVLFVATANDGDTIPGPLLDRMEVIRIPGYTFDEKLHIAERHLLPKQIKGHGLSPEEIRIDENVLLKIATGYTREAGVRNLEREVGAVCRAMAVE 615
BLAST of mRNA_H-elongata_contig55478.12963.1 vs. uniprot
Match: A0A0L0HBG1_SPIPD (Lon protease homolog 2, peroxisomal n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HBG1_SPIPD) HSP 1 Score: 387 bits (994), Expect = 8.170e-125 Identity = 192/325 (59.08%), Postives = 247/325 (76.00%), Query Frame = 1
Query: 13 EGDDMAALETRLEAAGLPSEASKVVMKDLARLKKMHPSQPEYTVVRMYLETVAELPWNRLSEETYDIRRAQIQLDRDHYGLHKARSCSDITFSLVKQRIAEYIAVRSLISDNKGSILCLVGPPGVGKTSLGRSIASALNREFQRLSLGGVHDEAEIRGHRRTYIGAMPGGIVRCLRRAGARNPVLLLDEVDKIGSNIRGGDPSAALLEVLDPEQHDSFTDHYLNVPFDLSSVLFVATANKVDTIPEALLDRLEVINIPGYTLEEKVRIAEAYLIPKQMDKNGVSTEHVMLPRSTVLRVASSYTREAGVRQLERELAAICRHVALK 987
E DD+A L R+ A LP EA+K ++L RLK+MHPS EY VVR YLE ++ELPW + +E+ DI RA+ QLD DH+GL K VK RI EY+AVR L D KG ILC +GPPGVGKTSLG+S+A+AL R+F R+SLGGV DEAEIRGHRRTYIGA+PG I++ LRR G NPV+LLDE+DK+G + RG DPS+ALLEVLDPEQ+ +FTDHYLNVPFDLS+VLF+ATAN DTIP L DR+EVI IPGYT +EK+ IA+ +L+PKQ+ +G+ + + + + ++++A+ YTREAGVR LERE+ A+CR +A++
Sbjct: 300 EEDDVADLTKRISEAKLPEEATKAAERELRRLKRMHPSMAEYQVVRTYLEWLSELPWEKQTEDVMDIARARSQLDEDHFGLEK-----------VKTRILEYLAVRKLKQDLKGPILCFLGPPGVGKTSLGKSLANALGRKFHRISLGGVRDEAEIRGHRRTYIGALPGRIIQGLRRCGVNNPVILLDEIDKLGHDARG-DPSSALLEVLDPEQNSTFTDHYLNVPFDLSNVLFIATANDADTIPGPLFDRMEVIRIPGYTFDEKLHIAKRHLLPKQIKAHGIEPDEIRIEENVLMKIATGYTREAGVRNLEREIGAVCRAMAVE 612
BLAST of mRNA_H-elongata_contig55478.12963.1 vs. uniprot
Match: A0A2E6VX71_9DELT (Lon protease n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A2E6VX71_9DELT) HSP 1 Score: 386 bits (991), Expect = 1.050e-124 Identity = 189/319 (59.25%), Postives = 245/319 (76.80%), Query Frame = 1
Query: 34 LETRLEAAGLPSEASKVVMKDLARLKKMHPSQPEYTVVRMYLETVAELPWNRLSEETYDIRRAQIQLDRDHYGLHKARSCSDITFSLVKQRIAEYIAVRSLISDNKGSILCLVGPPGVGKTSLGRSIASALNREFQRLSLGGVHDEAEIRGHRRTYIGAMPGGIVRCLRRAGARNPVLLLDEVDKIGSNIRGGDPSAALLEVLDPEQHDSFTDHYLNVPFDLSSVLFVATANKVDTIPEALLDRLEVINIPGYTLEEKVRIAEAYLIPKQMDKNGVSTEHVMLPRSTVLRVASSYTREAGVRQLERELAAICRHVALKV 990
LE RL L EA K ++L R++ M PSQ EYTV R YLE +A++PW++ +E+ D+ A+ QLD DHYGL K VK+RI EY+AVR L D KG ILC +GPPGVGKTSLGRSIA AL R+F R++LGGV DEAEIRGHRRTYIGA+PG I++ ++++G+ NPV L DE+DK+GS+ RG DPS+ALLEVLDPEQ+++F+DHYL+VPFDLS VLF+ATAN+ DTIP L DR+E+I +PGYT EEK IA+ +LIPKQ+ ++G++ EH+ P T+L++A+SYTREAGVR LERE+AA+CR VA+ V
Sbjct: 268 LERRLSETDLTEEAQKAAQRELRRMRNMQPSQAEYTVARTYLEWLADIPWHQYTEDNLDLNNAKNQLDDDHYGLEK-----------VKKRIIEYLAVRKLKDDMKGPILCFLGPPGVGKTSLGRSIADALGRKFHRIALGGVRDEAEIRGHRRTYIGALPGRIIQGMKKSGSHNPVFLFDEIDKLGSDFRG-DPSSALLEVLDPEQNNTFSDHYLDVPFDLSKVLFIATANQADTIPAPLRDRMEIIELPGYTFEEKENIAKQHLIPKQVKEHGITDEHIDFPDETILKIATSYTREAGVRNLEREIAAVCRSVAVDV 574
BLAST of mRNA_H-elongata_contig55478.12963.1 vs. uniprot
Match: A0A2Z6RW64_9GLOM (Lon protease homolog 2, peroxisomal n=8 Tax=Rhizophagus TaxID=1129544 RepID=A0A2Z6RW64_9GLOM) HSP 1 Score: 385 bits (990), Expect = 2.410e-124 Identity = 195/327 (59.63%), Postives = 247/327 (75.54%), Query Frame = 1
Query: 7 SSEGDDMAALETRLEAAGLPSEASKVVMKDLARLKKMHPSQPEYTVVRMYLETVAELPWNRLSEETYDIRRAQIQLDRDHYGLHKARSCSDITFSLVKQRIAEYIAVRSLISDNKGSILCLVGPPGVGKTSLGRSIASALNREFQRLSLGGVHDEAEIRGHRRTYIGAMPGGIVRCLRRAGARNPVLLLDEVDKIGSNIRGGDPSAALLEVLDPEQHDSFTDHYLNVPFDLSSVLFVATANKVDTIPEALLDRLEVINIPGYTLEEKVRIAEAYLIPKQMDKNGVSTEHVMLPRSTVLRVASSYTREAGVRQLERELAAICRHVALK 987
S+E DD+ L R++ AGL EA+KV ++L RLK+MH +Q EY VVR YLE ++E+PW++ + + DI +A+ QL+ DHYGL VK+RI EY+AV L D KG ILCL+GPPGVGKTSLG+SIASAL R+F R+SLGGV DEAEIRGHRRTYIGAMPG I + LRR G NP+ LLDE+DK+G GDPSAALLEVLDPEQ+++F DHYLNVP DLS VLF+ATAN+VDTIP LLDR+E+INIPGYT EEK+ IA+ +L+PKQ+ +G+S E V + +L++AS YTREAGVR ERE+A++CR A++
Sbjct: 294 SNEDDDITDLTKRIKEAGLSPEANKVAQRELKRLKRMHSTQAEYQVVRTYLEWLSEIPWSKSTSDIIDIDKARQQLEDDHYGLES-----------VKKRILEYLAVLKLKGDLKGPILCLLGPPGVGKTSLGKSIASALGRKFHRISLGGVRDEAEIRGHRRTYIGAMPGLIAQGLRRVGFNNPIFLLDEIDKVGHQSNHGDPSAALLEVLDPEQNNTFNDHYLNVPLDLSKVLFIATANQVDTIPPPLLDRMELINIPGYTFEEKINIAQRHLLPKQITNHGLSLEDVKMSDEVLLKIASGYTREAGVRNFEREIASVCRAKAVE 609
BLAST of mRNA_H-elongata_contig55478.12963.1 vs. uniprot
Match: W7TV02_9STRA (Atp-dependent protease la n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TV02_9STRA) HSP 1 Score: 372 bits (954), Expect = 6.940e-124 Identity = 192/308 (62.34%), Postives = 231/308 (75.00%), Query Frame = 1
Query: 10 SEGDDMAALETRLEAAGLPSEASKVVMKDLARLKKMHPSQPEYTVVRMYLETVAELPW-----------------NRLSEETYDIRRAQIQLDRDHYGLHKARSCSDITFSLVKQRIAEYIAVRSLISDNKGSILCLVGPPGVGKTSLGRSIASALNREFQRLSLGGVHDEAEIRGHRRTYIGAMPGGIVRCLRRAGARNPVLLLDEVDKIGSNIRGGDPSAALLEVLDPEQHDSFTDHYLNVPFDLSSVLFVATANKVDTIPEALLDRLEVINIPGYTLEEKVRIAEAYLIPKQMDKNGVSTEHVML 882
SE DDM L RL+A LP E K+L RLK+M PSQPE++VVR YLE + +LPW + + E +D+R + QLDRDH+GL K VK+RI EYIAVRSL KG ILCLVGPPGVGKTSLGRSIA+AL R FQRLSLGGVHDEAEIRGHRRTYIGA+PG I++C+++AG +P+ LLDEVDK+GS+IRGGDPSAA+LEVLDPEQ+ +FTDHYLN+P+DLS V F+ATAN+ DTIPE LLDR+EVIN+PGYT+EEKV IAE YLIPKQ+ NG+S EHV++
Sbjct: 150 SEEDDMTELANRLKAKPLPREVRVAAEKELRRLKRMQPSQPEHSVVRTYLEWILDLPWFLKDDENEAGDTDAQVPSNVEEAFFDVRAVEAQLDRDHHGLGK-----------VKRRILEYIAVRSLTRSLKGPILCLVGPPGVGKTSLGRSIATALGRRFQRLSLGGVHDEAEIRGHRRTYIGALPGNILQCMKKAGTPDPLFLLDEVDKLGSSIRGGDPSAAMLEVLDPEQNSTFTDHYLNLPYDLSRVFFLATANQTDTIPEPLLDRMEVINLPGYTIEEKVFIAEQYLIPKQLAANGLSPEHVIV 446
BLAST of mRNA_H-elongata_contig55478.12963.1 vs. uniprot
Match: A0A673N7B7_9TELE (Lon peptidase 2, peroxisomal n=2 Tax=Sinocyclocheilus rhinocerous TaxID=307959 RepID=A0A673N7B7_9TELE) HSP 1 Score: 375 bits (963), Expect = 2.330e-123 Identity = 188/325 (57.85%), Postives = 242/325 (74.46%), Query Frame = 1
Query: 13 EGDDMAALETRLEAAGLPSEASKVVMKDLARLKKMHPSQPEYTVVRMYLETVAELPWNRLSEETYDIRRAQIQLDRDHYGLHKARSCSDITFSLVKQRIAEYIAVRSLISDNKGSILCLVGPPGVGKTSLGRSIASALNREFQRLSLGGVHDEAEIRGHRRTYIGAMPGGIVRCLRRAGARNPVLLLDEVDKIGSNIRGGDPSAALLEVLDPEQHDSFTDHYLNVPFDLSSVLFVATANKVDTIPEALLDRLEVINIPGYTLEEKVRIAEAYLIPKQMDKNGVSTEHVMLPRSTVLRVASSYTREAGVRQLERELAAICRHVALK 987
+GDD A LE +++AA +P A +V +K+L RLKKM S PEY + R YLE + ELPW++ S + DIR A++ LD DHY + K +K+R+ EY+AVR L S KG ILC VGPPGVGKTS+GRSIA L REF RL+LGGV D+++IRGHRRTY+G+MPG I+ L+ G NPV LLDEVDK+G +++G DP+AALLEVLDPEQ+ SFTDHYLNVPFDLS VLF+ATAN TIP ALLDR+EV+ +PGYT EEKV IA +LIP Q++++G++ + + +P+ T + S YTREAGVR LER++ AICR VA+K
Sbjct: 222 DGDDTAMLEKKVKAAAMPEAALRVCLKELKRLKKMPQSMPEYALTRNYLEMMVELPWSKSSTDCLDIRAARVLLDNDHYAMEK-----------LKRRVLEYLAVRQLKSTLKGPILCFVGPPGVGKTSVGRSIARTLGREFHRLALGGVCDQSDIRGHRRTYVGSMPGRIINGLKTVGVNNPVFLLDEVDKLGKSLQG-DPAAALLEVLDPEQNHSFTDHYLNVPFDLSQVLFIATANTTATIPPALLDRMEVLQVPGYTQEEKVEIAHRHLIPHQLEQHGLTPQQLQIPQDTTKDIISKYTREAGVRSLERKIGAICRAVAVK 534 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig55478.12963.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig55478.12963.1 >prot_H-elongata_contig55478.12963.1 ID=prot_H-elongata_contig55478.12963.1|Name=mRNA_H-elongata_contig55478.12963.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=324bp MAALETRLEAAGLPSEASKVVMKDLARLKKMHPSQPEYTVVRMYLETVAEback to top mRNA from alignment at H-elongata_contig55478:146..3508- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig55478.12963.1 ID=mRNA_H-elongata_contig55478.12963.1|Name=mRNA_H-elongata_contig55478.12963.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3363bp|location=Sequence derived from alignment at H-elongata_contig55478:146..3508- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig55478:146..3508- >mRNA_H-elongata_contig55478.12963.1 ID=mRNA_H-elongata_contig55478.12963.1|Name=mRNA_H-elongata_contig55478.12963.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1944bp|location=Sequence derived from alignment at H-elongata_contig55478:146..3508- (Himanthalia elongata Himel1 dioecious)back to top |