mRNA_H-elongata_contig55478.12963.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig55478.12963.1
Unique NamemRNA_H-elongata_contig55478.12963.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig55478.12963.1 vs. uniprot
Match: D8LGC2_ECTSI (Lon protease homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGC2_ECTSI)

HSP 1 Score: 549 bits (1415), Expect = 2.480e-184
Identity = 280/333 (84.08%), Postives = 306/333 (91.89%), Query Frame = 1
Query:    1 GGSSEGDDMAALETRLEAAGLPSEASKVVMKDLARLKKMHPSQPEYTVVRMYLETVAELPWNRLSEETYDIRRAQIQLDRDHYGLHKARSCSDITFSLVKQRIAEYIAVRSLISDNKGSILCLVGPPGVGKTSLGRSIASALNREFQRLSLGGVHDEAEIRGHRRTYIGAMPGGIVRCLRRAGARNPVLLLDEVDKIGSNIRGGDPSAALLEVLDPEQHDSFTDHYLNVPFDLSSVLFVATANKVDTIPEALLDRLEVINIPGYTLEEKVRIAEAYLIPKQMDKNGVSTEHVMLPRSTVLRVASSYTREAGVRQLERELAAICRHVALKV-IW 996
            GGSSEGD++AALE ++EAAGLP EASKV  +DL+RLK+M  SQPEYTV+R YLETV+ELPWNR+SEETYDIRRAQ QLD+DHYGL+K           VKQRI EYIAVRSL+SD+KGSILCLVGPPGVGKTSLGRSIA+ALNR+FQRLSLGGVHDEAEIRGHRRTYIGAMPGGIVRCLRRAG RNPV+LLDEVDKIGSN+RGGDPSAALLEVLDPEQ+DSFTDHY+NVPFDLSSVLFVATANKVD IPE LLDRLEVI+IPGYTLEEKV+IAEAYLIPKQM KNGV  EH++LPRSTVLRVASSYTREAGVRQLERELAA+CRHVALKV +W
Sbjct:  307 GGSSEGDEVAALEAKIEAAGLPPEASKVAKRDLSRLKRMQASQPEYTVIRTYLETVSELPWNRVSEETYDIRRAQRQLDKDHYGLNK-----------VKQRIVEYIAVRSLLSDSKGSILCLVGPPGVGKTSLGRSIAAALNRKFQRLSLGGVHDEAEIRGHRRTYIGAMPGGIVRCLRRAGTRNPVMLLDEVDKIGSNVRGGDPSAALLEVLDPEQNDSFTDHYVNVPFDLSSVLFVATANKVDAIPEPLLDRLEVIHIPGYTLEEKVKIAEAYLIPKQMKKNGVGAEHMLLPRSTVLRVASSYTREAGVRQLERELAAVCRHVALKVGVW 628          
BLAST of mRNA_H-elongata_contig55478.12963.1 vs. uniprot
Match: A0A4D9CQU2_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CQU2_9STRA)

HSP 1 Score: 417 bits (1071), Expect = 1.330e-134
Identity = 214/344 (62.21%), Postives = 260/344 (75.58%), Query Frame = 1
Query:   10 SEGDDMAALETRLEAAGLPSEASKVVMKDLARLKKMHPSQPEYTVVRMYLETVAELPW-----------------NRLSEETYDIRRAQIQLDRDHYGLHKARSCSDITFSLVKQRIAEYIAVRSLISDNKGSILCLVGPPGVGKTSLGRSIASALNREFQRLSLGGVHDEAEIRGHRRTYIGAMPGGIVRCLRRAGARNPVLLLDEVDKIGSNIRGGDPSAALLEVLDPEQHDSFTDHYLNVPFDLSSVLFVATANKVDTIPEALLDRLEVINIPGYTLEEKVRIAEAYLIPKQMDKNGVSTEHVMLPRSTVLRVASSYTREAGVRQLERELAAICRHVALKV 990
            SE DDM  L  RL+A  LP +      K+L RLK+M PSQPE++VVR YLE + +LPW                 + + E  +D+R  + QLDRDH+GL K           VK+RI EYIAVRSL    KG ILCLVGPPGVGKTSLGRSIA+AL R FQRLSLGGVHDEAEIRGHRRTYIGA+PG I++C+++AG  +P+ LLDEVDK+GS+IRGGDPSAA+LEVLDPEQ+ +FTDHYLN+P+DLS V F+ATAN+ DTIPE LLDR+EVIN+PGYT+EEKV IAE YLIPKQ+  NG+S EHV++    V  +A+ YTREAGVRQ+ERELAA+CRHVA++V
Sbjct:  296 SEEDDMTELANRLKAKPLPRDVRVAAEKELRRLKRMQPSQPEHSVVRTYLEWILDLPWFVKDDENEAGDTDTREPSNVEEAFFDVRAVEAQLDRDHHGLGK-----------VKRRILEYIAVRSLTRSLKGPILCLVGPPGVGKTSLGRSIATALGRRFQRLSLGGVHDEAEIRGHRRTYIGALPGNILQCMKKAGTPDPLFLLDEVDKLGSSIRGGDPSAAMLEVLDPEQNSTFTDHYLNLPYDLSRVFFLATANQTDTIPEPLLDRMEVINLPGYTIEEKVFIAEQYLIPKQLAANGLSPEHVIVTPRAVQSIATGYTREAGVRQIERELAAVCRHVAMQV 628          
BLAST of mRNA_H-elongata_contig55478.12963.1 vs. uniprot
Match: A0A2I1FU25_9GLOM (ATP-dependent protease La n=3 Tax=Rhizophagus TaxID=1129544 RepID=A0A2I1FU25_9GLOM)

HSP 1 Score: 382 bits (982), Expect = 5.930e-126
Identity = 194/327 (59.33%), Postives = 246/327 (75.23%), Query Frame = 1
Query:    7 SSEGDDMAALETRLEAAGLPSEASKVVMKDLARLKKMHPSQPEYTVVRMYLETVAELPWNRLSEETYDIRRAQIQLDRDHYGLHKARSCSDITFSLVKQRIAEYIAVRSLISDNKGSILCLVGPPGVGKTSLGRSIASALNREFQRLSLGGVHDEAEIRGHRRTYIGAMPGGIVRCLRRAGARNPVLLLDEVDKIGSNIRGGDPSAALLEVLDPEQHDSFTDHYLNVPFDLSSVLFVATANKVDTIPEALLDRLEVINIPGYTLEEKVRIAEAYLIPKQMDKNGVSTEHVMLPRSTVLRVASSYTREAGVRQLERELAAICRHVALK 987
            S E DD+  L  R++ AGL  EA+K   ++L RLK+MH +Q EY VVR YLE ++E+PW++ + E  DI +A+ QL+ DHYGL             VK+RI EY+AV  L  D KG ILCL+GPPGVGKTSLG+SIASAL R+F R+SLGGV DEAEIRGHRRTYIGAMPG I + L+R GA NP+ LLDE+DK+G     GDPSAALLEVLDPEQ+++F DHYLNVP DLS VLF+ATAN+VDTIP  LLDR+E+INIPGYT EEK+ IA+ +L+PKQ+  +G+S + V +    +L++AS YTREAGVR  ERE+A++CR  A++
Sbjct:   52 SHEDDDITDLTKRIKEAGLSPEANKAAQRELKRLKRMHSTQAEYQVVRTYLEWLSEIPWSKSTSEIIDIDKARQQLEDDHYGLES-----------VKKRILEYLAVLKLKGDLKGPILCLLGPPGVGKTSLGKSIASALGRKFHRISLGGVRDEAEIRGHRRTYIGAMPGLIAQGLKRVGANNPIFLLDEIDKVGHLSNHGDPSAALLEVLDPEQNNTFNDHYLNVPLDLSKVLFIATANQVDTIPAPLLDRMELINIPGYTFEEKINIAQRHLLPKQITNHGLSLDDVKMLDEVLLKIASGYTREAGVRNFEREIASVCRAKAVE 367          
BLAST of mRNA_H-elongata_contig55478.12963.1 vs. uniprot
Match: A0A2R5GJ38_9STRA (Lon protease homolog n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GJ38_9STRA)

HSP 1 Score: 392 bits (1007), Expect = 1.890e-125
Identity = 196/330 (59.39%), Postives = 251/330 (76.06%), Query Frame = 1
Query:    1 GGSSEGDDMAALETRLEAAGLPSEASKVVMKDLARLKKMHPSQPEYTVVRMYLETVAELPWNRLSEETYDIRRAQIQLDRDHYGLHKARSCSDITFSLVKQRIAEYIAVRSLISDNKGSILCLVGPPGVGKTSLGRSIASALNREFQRLSLGGVHDEAEIRGHRRTYIGAMPGGIVRCLRRAGARNPVLLLDEVDKIGSNIRGGDPSAALLEVLDPEQHDSFTDHYLNVPFDLSSVLFVATANKVDTIPEALLDRLEVINIPGYTLEEKVRIAEAYLIPKQMDKNGVSTEHVMLPRSTVLRVASSYTREAGVRQLERELAAICRHVALKV 990
            G  SE D++ ALE  L    LP E  +V  ++L RLK+M PSQPEY V+R YLE +AELPW ++S++  DI  A+ QLD DH+ L +           VK RI E++AVRSL +D KG ILCL GPPGVGKTSLG+S+A +L R+F+RL+LGGV DEAEIRGHRRTYIGA+PG I+  L++AG  NPV+LLDE+DK+G ++RG DP++ALLEVLDPEQ+D F DHYLNVP+DLS VLF+ATAN++DTIP  LLDR+EVI +PGYT  EK  IA  +LIPKQM+++G++ +H+    S V +V  SYTREAGVR L+RE+AA+CRH A+KV
Sbjct:  311 GAGSEQDEIEALEENLAGIKLPEEPRQVADRELQRLKQMQPSQPEYAVIRSYLELMAELPWGKVSKDNLDIGHARAQLDADHHALER-----------VKNRIIEFLAVRSLKNDMKGPILCLAGPPGVGKTSLGKSVAESLGRQFRRLALGGVRDEAEIRGHRRTYIGALPGNIITTLKKAGTENPVILLDEIDKLGRDVRG-DPASALLEVLDPEQNDKFVDHYLNVPYDLSKVLFIATANRLDTIPGPLLDRMEVIELPGYTQAEKHEIAIQHLIPKQMERHGIAKDHIEFTPSAVDKVIDSYTREAGVRSLDREIAALCRHAAVKV 628          
BLAST of mRNA_H-elongata_contig55478.12963.1 vs. uniprot
Match: A0A507DWD9_9FUNG (Lon protease homolog 2, peroxisomal n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507DWD9_9FUNG)

HSP 1 Score: 388 bits (996), Expect = 4.020e-125
Identity = 199/325 (61.23%), Postives = 249/325 (76.62%), Query Frame = 1
Query:   13 EGDDMAALETRLEAAGLPSEASKVVMKDLARLKKMHPSQPEYTVVRMYLETVAELPWNRLSEETYDIRRAQIQLDRDHYGLHKARSCSDITFSLVKQRIAEYIAVRSLISDNKGSILCLVGPPGVGKTSLGRSIASALNREFQRLSLGGVHDEAEIRGHRRTYIGAMPGGIVRCLRRAGARNPVLLLDEVDKIGSNIRGGDPSAALLEVLDPEQHDSFTDHYLNVPFDLSSVLFVATANKVDTIPEALLDRLEVINIPGYTLEEKVRIAEAYLIPKQMDKNGVSTEHVMLPRSTVLRVASSYTREAGVRQLERELAAICRHVALK 987
            E D++A L TR+  A LP EASK   +++ RLK+MHPS  EY VVR YLE ++ELPW + SE+  DI RA+ QLD DH+GL K           VK RI EY+AVR L  D KG ILC +GPPGVGKTSLG+S+A+AL R+F R+SLGGV DEAEIRGHRRTYIGA+PG IV+ LRR G  NPV+LLDE+DK+G + RG DPS+ALLEVLDPEQ+ +FTDHYLNV FDLS+VLFVATAN  DTIP  LLDR+EVI IPGYT +EK+ IAE +L+PKQ+  +G+S E + +  + +L++A+ YTREAGVR LERE+ A+CR +A++
Sbjct:  303 EEDEVADLVTRIADAKLPEEASKAAGREIRRLKRMHPSMAEYQVVRTYLEWLSELPWEKQSEDVMDIARARQQLDDDHFGLEK-----------VKTRILEYLAVRKLKKDLKGPILCFLGPPGVGKTSLGKSLANALGRKFHRISLGGVRDEAEIRGHRRTYIGALPGRIVQGLRRCGVNNPVILLDEIDKLGRDSRG-DPSSALLEVLDPEQNSTFTDHYLNVAFDLSNVLFVATANDGDTIPGPLLDRMEVIRIPGYTFDEKLHIAERHLLPKQIKGHGLSPEEIRIDENVLLKIATGYTREAGVRNLEREVGAVCRAMAVE 615          
BLAST of mRNA_H-elongata_contig55478.12963.1 vs. uniprot
Match: A0A0L0HBG1_SPIPD (Lon protease homolog 2, peroxisomal n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HBG1_SPIPD)

HSP 1 Score: 387 bits (994), Expect = 8.170e-125
Identity = 192/325 (59.08%), Postives = 247/325 (76.00%), Query Frame = 1
Query:   13 EGDDMAALETRLEAAGLPSEASKVVMKDLARLKKMHPSQPEYTVVRMYLETVAELPWNRLSEETYDIRRAQIQLDRDHYGLHKARSCSDITFSLVKQRIAEYIAVRSLISDNKGSILCLVGPPGVGKTSLGRSIASALNREFQRLSLGGVHDEAEIRGHRRTYIGAMPGGIVRCLRRAGARNPVLLLDEVDKIGSNIRGGDPSAALLEVLDPEQHDSFTDHYLNVPFDLSSVLFVATANKVDTIPEALLDRLEVINIPGYTLEEKVRIAEAYLIPKQMDKNGVSTEHVMLPRSTVLRVASSYTREAGVRQLERELAAICRHVALK 987
            E DD+A L  R+  A LP EA+K   ++L RLK+MHPS  EY VVR YLE ++ELPW + +E+  DI RA+ QLD DH+GL K           VK RI EY+AVR L  D KG ILC +GPPGVGKTSLG+S+A+AL R+F R+SLGGV DEAEIRGHRRTYIGA+PG I++ LRR G  NPV+LLDE+DK+G + RG DPS+ALLEVLDPEQ+ +FTDHYLNVPFDLS+VLF+ATAN  DTIP  L DR+EVI IPGYT +EK+ IA+ +L+PKQ+  +G+  + + +  + ++++A+ YTREAGVR LERE+ A+CR +A++
Sbjct:  300 EEDDVADLTKRISEAKLPEEATKAAERELRRLKRMHPSMAEYQVVRTYLEWLSELPWEKQTEDVMDIARARSQLDEDHFGLEK-----------VKTRILEYLAVRKLKQDLKGPILCFLGPPGVGKTSLGKSLANALGRKFHRISLGGVRDEAEIRGHRRTYIGALPGRIIQGLRRCGVNNPVILLDEIDKLGHDARG-DPSSALLEVLDPEQNSTFTDHYLNVPFDLSNVLFIATANDADTIPGPLFDRMEVIRIPGYTFDEKLHIAKRHLLPKQIKAHGIEPDEIRIEENVLMKIATGYTREAGVRNLEREIGAVCRAMAVE 612          
BLAST of mRNA_H-elongata_contig55478.12963.1 vs. uniprot
Match: A0A2E6VX71_9DELT (Lon protease n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A2E6VX71_9DELT)

HSP 1 Score: 386 bits (991), Expect = 1.050e-124
Identity = 189/319 (59.25%), Postives = 245/319 (76.80%), Query Frame = 1
Query:   34 LETRLEAAGLPSEASKVVMKDLARLKKMHPSQPEYTVVRMYLETVAELPWNRLSEETYDIRRAQIQLDRDHYGLHKARSCSDITFSLVKQRIAEYIAVRSLISDNKGSILCLVGPPGVGKTSLGRSIASALNREFQRLSLGGVHDEAEIRGHRRTYIGAMPGGIVRCLRRAGARNPVLLLDEVDKIGSNIRGGDPSAALLEVLDPEQHDSFTDHYLNVPFDLSSVLFVATANKVDTIPEALLDRLEVINIPGYTLEEKVRIAEAYLIPKQMDKNGVSTEHVMLPRSTVLRVASSYTREAGVRQLERELAAICRHVALKV 990
            LE RL    L  EA K   ++L R++ M PSQ EYTV R YLE +A++PW++ +E+  D+  A+ QLD DHYGL K           VK+RI EY+AVR L  D KG ILC +GPPGVGKTSLGRSIA AL R+F R++LGGV DEAEIRGHRRTYIGA+PG I++ ++++G+ NPV L DE+DK+GS+ RG DPS+ALLEVLDPEQ+++F+DHYL+VPFDLS VLF+ATAN+ DTIP  L DR+E+I +PGYT EEK  IA+ +LIPKQ+ ++G++ EH+  P  T+L++A+SYTREAGVR LERE+AA+CR VA+ V
Sbjct:  268 LERRLSETDLTEEAQKAAQRELRRMRNMQPSQAEYTVARTYLEWLADIPWHQYTEDNLDLNNAKNQLDDDHYGLEK-----------VKKRIIEYLAVRKLKDDMKGPILCFLGPPGVGKTSLGRSIADALGRKFHRIALGGVRDEAEIRGHRRTYIGALPGRIIQGMKKSGSHNPVFLFDEIDKLGSDFRG-DPSSALLEVLDPEQNNTFSDHYLDVPFDLSKVLFIATANQADTIPAPLRDRMEIIELPGYTFEEKENIAKQHLIPKQVKEHGITDEHIDFPDETILKIATSYTREAGVRNLEREIAAVCRSVAVDV 574          
BLAST of mRNA_H-elongata_contig55478.12963.1 vs. uniprot
Match: A0A2Z6RW64_9GLOM (Lon protease homolog 2, peroxisomal n=8 Tax=Rhizophagus TaxID=1129544 RepID=A0A2Z6RW64_9GLOM)

HSP 1 Score: 385 bits (990), Expect = 2.410e-124
Identity = 195/327 (59.63%), Postives = 247/327 (75.54%), Query Frame = 1
Query:    7 SSEGDDMAALETRLEAAGLPSEASKVVMKDLARLKKMHPSQPEYTVVRMYLETVAELPWNRLSEETYDIRRAQIQLDRDHYGLHKARSCSDITFSLVKQRIAEYIAVRSLISDNKGSILCLVGPPGVGKTSLGRSIASALNREFQRLSLGGVHDEAEIRGHRRTYIGAMPGGIVRCLRRAGARNPVLLLDEVDKIGSNIRGGDPSAALLEVLDPEQHDSFTDHYLNVPFDLSSVLFVATANKVDTIPEALLDRLEVINIPGYTLEEKVRIAEAYLIPKQMDKNGVSTEHVMLPRSTVLRVASSYTREAGVRQLERELAAICRHVALK 987
            S+E DD+  L  R++ AGL  EA+KV  ++L RLK+MH +Q EY VVR YLE ++E+PW++ + +  DI +A+ QL+ DHYGL             VK+RI EY+AV  L  D KG ILCL+GPPGVGKTSLG+SIASAL R+F R+SLGGV DEAEIRGHRRTYIGAMPG I + LRR G  NP+ LLDE+DK+G     GDPSAALLEVLDPEQ+++F DHYLNVP DLS VLF+ATAN+VDTIP  LLDR+E+INIPGYT EEK+ IA+ +L+PKQ+  +G+S E V +    +L++AS YTREAGVR  ERE+A++CR  A++
Sbjct:  294 SNEDDDITDLTKRIKEAGLSPEANKVAQRELKRLKRMHSTQAEYQVVRTYLEWLSEIPWSKSTSDIIDIDKARQQLEDDHYGLES-----------VKKRILEYLAVLKLKGDLKGPILCLLGPPGVGKTSLGKSIASALGRKFHRISLGGVRDEAEIRGHRRTYIGAMPGLIAQGLRRVGFNNPIFLLDEIDKVGHQSNHGDPSAALLEVLDPEQNNTFNDHYLNVPLDLSKVLFIATANQVDTIPPPLLDRMELINIPGYTFEEKINIAQRHLLPKQITNHGLSLEDVKMSDEVLLKIASGYTREAGVRNFEREIASVCRAKAVE 609          
BLAST of mRNA_H-elongata_contig55478.12963.1 vs. uniprot
Match: W7TV02_9STRA (Atp-dependent protease la n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TV02_9STRA)

HSP 1 Score: 372 bits (954), Expect = 6.940e-124
Identity = 192/308 (62.34%), Postives = 231/308 (75.00%), Query Frame = 1
Query:   10 SEGDDMAALETRLEAAGLPSEASKVVMKDLARLKKMHPSQPEYTVVRMYLETVAELPW-----------------NRLSEETYDIRRAQIQLDRDHYGLHKARSCSDITFSLVKQRIAEYIAVRSLISDNKGSILCLVGPPGVGKTSLGRSIASALNREFQRLSLGGVHDEAEIRGHRRTYIGAMPGGIVRCLRRAGARNPVLLLDEVDKIGSNIRGGDPSAALLEVLDPEQHDSFTDHYLNVPFDLSSVLFVATANKVDTIPEALLDRLEVINIPGYTLEEKVRIAEAYLIPKQMDKNGVSTEHVML 882
            SE DDM  L  RL+A  LP E      K+L RLK+M PSQPE++VVR YLE + +LPW                 + + E  +D+R  + QLDRDH+GL K           VK+RI EYIAVRSL    KG ILCLVGPPGVGKTSLGRSIA+AL R FQRLSLGGVHDEAEIRGHRRTYIGA+PG I++C+++AG  +P+ LLDEVDK+GS+IRGGDPSAA+LEVLDPEQ+ +FTDHYLN+P+DLS V F+ATAN+ DTIPE LLDR+EVIN+PGYT+EEKV IAE YLIPKQ+  NG+S EHV++
Sbjct:  150 SEEDDMTELANRLKAKPLPREVRVAAEKELRRLKRMQPSQPEHSVVRTYLEWILDLPWFLKDDENEAGDTDAQVPSNVEEAFFDVRAVEAQLDRDHHGLGK-----------VKRRILEYIAVRSLTRSLKGPILCLVGPPGVGKTSLGRSIATALGRRFQRLSLGGVHDEAEIRGHRRTYIGALPGNILQCMKKAGTPDPLFLLDEVDKLGSSIRGGDPSAAMLEVLDPEQNSTFTDHYLNLPYDLSRVFFLATANQTDTIPEPLLDRMEVINLPGYTIEEKVFIAEQYLIPKQLAANGLSPEHVIV 446          
BLAST of mRNA_H-elongata_contig55478.12963.1 vs. uniprot
Match: A0A673N7B7_9TELE (Lon peptidase 2, peroxisomal n=2 Tax=Sinocyclocheilus rhinocerous TaxID=307959 RepID=A0A673N7B7_9TELE)

HSP 1 Score: 375 bits (963), Expect = 2.330e-123
Identity = 188/325 (57.85%), Postives = 242/325 (74.46%), Query Frame = 1
Query:   13 EGDDMAALETRLEAAGLPSEASKVVMKDLARLKKMHPSQPEYTVVRMYLETVAELPWNRLSEETYDIRRAQIQLDRDHYGLHKARSCSDITFSLVKQRIAEYIAVRSLISDNKGSILCLVGPPGVGKTSLGRSIASALNREFQRLSLGGVHDEAEIRGHRRTYIGAMPGGIVRCLRRAGARNPVLLLDEVDKIGSNIRGGDPSAALLEVLDPEQHDSFTDHYLNVPFDLSSVLFVATANKVDTIPEALLDRLEVINIPGYTLEEKVRIAEAYLIPKQMDKNGVSTEHVMLPRSTVLRVASSYTREAGVRQLERELAAICRHVALK 987
            +GDD A LE +++AA +P  A +V +K+L RLKKM  S PEY + R YLE + ELPW++ S +  DIR A++ LD DHY + K           +K+R+ EY+AVR L S  KG ILC VGPPGVGKTS+GRSIA  L REF RL+LGGV D+++IRGHRRTY+G+MPG I+  L+  G  NPV LLDEVDK+G +++G DP+AALLEVLDPEQ+ SFTDHYLNVPFDLS VLF+ATAN   TIP ALLDR+EV+ +PGYT EEKV IA  +LIP Q++++G++ + + +P+ T   + S YTREAGVR LER++ AICR VA+K
Sbjct:  222 DGDDTAMLEKKVKAAAMPEAALRVCLKELKRLKKMPQSMPEYALTRNYLEMMVELPWSKSSTDCLDIRAARVLLDNDHYAMEK-----------LKRRVLEYLAVRQLKSTLKGPILCFVGPPGVGKTSVGRSIARTLGREFHRLALGGVCDQSDIRGHRRTYVGSMPGRIINGLKTVGVNNPVFLLDEVDKLGKSLQG-DPAAALLEVLDPEQNHSFTDHYLNVPFDLSQVLFIATANTTATIPPALLDRMEVLQVPGYTQEEKVEIAHRHLIPHQLEQHGLTPQQLQIPQDTTKDIISKYTREAGVRSLERKIGAICRAVAVK 534          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig55478.12963.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LGC2_ECTSI2.480e-18484.08Lon protease homolog n=1 Tax=Ectocarpus siliculosu... [more]
A0A4D9CQU2_9STRA1.330e-13462.21Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A2I1FU25_9GLOM5.930e-12659.33ATP-dependent protease La n=3 Tax=Rhizophagus TaxI... [more]
A0A2R5GJ38_9STRA1.890e-12559.39Lon protease homolog n=1 Tax=Hondaea fermentalgian... [more]
A0A507DWD9_9FUNG4.020e-12561.23Lon protease homolog 2, peroxisomal n=1 Tax=Powell... [more]
A0A0L0HBG1_SPIPD8.170e-12559.08Lon protease homolog 2, peroxisomal n=2 Tax=Spizel... [more]
A0A2E6VX71_9DELT1.050e-12459.25Lon protease n=1 Tax=Myxococcales bacterium TaxID=... [more]
A0A2Z6RW64_9GLOM2.410e-12459.63Lon protease homolog 2, peroxisomal n=8 Tax=Rhizop... [more]
W7TV02_9STRA6.940e-12462.34Atp-dependent protease la n=1 Tax=Nannochloropsis ... [more]
A0A673N7B7_9TELE2.330e-12357.85Lon peptidase 2, peroxisomal n=2 Tax=Sinocyclochei... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig55478contigH-elongata_contig55478:146..3508 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score538.5
Seed ortholog evalue2.1e-150
Seed eggNOG ortholog2880.D8LGC2
Preferred nameLONP2
KEGG koko:K01338,ko:K08675
KEGG Pathwayko04112,map04112
GOsGO:0000002,GO:0002020,GO:0003674,GO:0003824,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005777,GO:0005782,GO:0005829,GO:0006139,GO:0006259,GO:0006508,GO:0006605,GO:0006625,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006950,GO:0006996,GO:0007005,GO:0007031,GO:0007275,GO:0008104,GO:0008150,GO:0008152,GO:0008233,GO:0009266,GO:0009408,GO:0009628,GO:0009791,GO:0009894,GO:0009987,GO:0010033,GO:0010467,GO:0010565,GO:0014070,GO:0015031,GO:0015833,GO:0015919,GO:0016043,GO:0016485,GO:0016558,GO:0016560,GO:0016787,GO:0017038,GO:0019216,GO:0019217,GO:0019222,GO:0019538,GO:0019899,GO:0022622,GO:0031323,GO:0031329,GO:0031907,GO:0031974,GO:0031998,GO:0032042,GO:0032501,GO:0032502,GO:0033036,GO:0033365,GO:0034613,GO:0034641,GO:0040007,GO:0042221,GO:0042579,GO:0042886,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043574,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044464,GO:0044743,GO:0045184,GO:0046320,GO:0046483,GO:0046907,GO:0048364,GO:0048527,GO:0048528,GO:0048731,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0050994,GO:0051179,GO:0051234,GO:0051604,GO:0051641,GO:0051649,GO:0055085,GO:0062012,GO:0065002,GO:0065007,GO:0070013,GO:0070727,GO:0071702,GO:0071704,GO:0071705,GO:0071806,GO:0071840,GO:0072594,GO:0072662,GO:0072663,GO:0080090,GO:0090304,GO:0090696,GO:0099402,GO:0140096,GO:1901360,GO:1901564
EggNOG free text desc.ATP-dependent serine protease that mediates the selective degradation of misfolded, unassembled or oxidatively damaged polypeptides as well as certain short-lived regulatory proteins in the mitochondrial matrix. May also have a chaperone function in the assembly of inner membrane protein complexes. Participates in the regulation of mitochondrial gene expression and in the maintenance of the integrity of the mitochondrial genome. Binds to mitochondrial
EggNOG OGsCOG0466@1,KOG2004@2759
EC3.4.21.53
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01002,ko03029
Hectar predicted targeting categoryother localisation
Exons5
Model size996
Cds size972
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig55478.12963.1prot_H-elongata_contig55478.12963.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig55478 146..3484 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930904.258661-CDS-H-elongata_contig55478:145..3701622930904.258661-CDS-H-elongata_contig55478:145..370Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig55478 146..370 -
1691679618.6794984-CDS-H-elongata_contig55478:145..3701691679618.6794984-CDS-H-elongata_contig55478:145..370Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig55478 146..370 -
1622930904.277058-CDS-H-elongata_contig55478:1404..17411622930904.277058-CDS-H-elongata_contig55478:1404..1741Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig55478 1405..1741 -
1691679618.695277-CDS-H-elongata_contig55478:1404..17411691679618.695277-CDS-H-elongata_contig55478:1404..1741Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig55478 1405..1741 -
1622930904.2972438-CDS-H-elongata_contig55478:2319..24591622930904.2972438-CDS-H-elongata_contig55478:2319..2459Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig55478 2320..2459 -
1691679618.7103727-CDS-H-elongata_contig55478:2319..24591691679618.7103727-CDS-H-elongata_contig55478:2319..2459Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig55478 2320..2459 -
1622930904.3169677-CDS-H-elongata_contig55478:2747..29001622930904.3169677-CDS-H-elongata_contig55478:2747..2900Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig55478 2748..2900 -
1691679618.7238457-CDS-H-elongata_contig55478:2747..29001691679618.7238457-CDS-H-elongata_contig55478:2747..2900Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig55478 2748..2900 -
1622930904.3353794-CDS-H-elongata_contig55478:3367..34841622930904.3353794-CDS-H-elongata_contig55478:3367..3484Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig55478 3368..3484 -
1691679618.7320893-CDS-H-elongata_contig55478:3367..34841691679618.7320893-CDS-H-elongata_contig55478:3367..3484Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig55478 3368..3484 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930904.3535001-UTR-H-elongata_contig55478:3484..35081622930904.3535001-UTR-H-elongata_contig55478:3484..3508Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig55478 3485..3508 -
1691679618.741053-UTR-H-elongata_contig55478:3484..35081691679618.741053-UTR-H-elongata_contig55478:3484..3508Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig55478 3485..3508 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig55478.12963.1

>prot_H-elongata_contig55478.12963.1 ID=prot_H-elongata_contig55478.12963.1|Name=mRNA_H-elongata_contig55478.12963.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=324bp
MAALETRLEAAGLPSEASKVVMKDLARLKKMHPSQPEYTVVRMYLETVAE
LPWNRLSEETYDIRRAQIQLDRDHYGLHKARSCSDITFSLVKQRIAEYIA
VRSLISDNKGSILCLVGPPGVGKTSLGRSIASALNREFQRLSLGGVHDEA
EIRGHRRTYIGAMPGGIVRCLRRAGARNPVLLLDEVDKIGSNIRGGDPSA
ALLEVLDPEQHDSFTDHYLNVPFDLSSVLFVATANKVDTIPEALLDRLEV
INIPGYTLEEKVRIAEAYLIPKQMDKNGVSTEHVMLPRSTVLRVASSYTR
EAGVRQLERELAAICRHVALKVIW
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mRNA from alignment at H-elongata_contig55478:146..3508-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig55478.12963.1 ID=mRNA_H-elongata_contig55478.12963.1|Name=mRNA_H-elongata_contig55478.12963.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3363bp|location=Sequence derived from alignment at H-elongata_contig55478:146..3508- (Himanthalia elongata Himel1 dioecious)
GGCGGGTCCAGCGAGGGCGACGACATGGCCGCATTAGAAACGAGGCTCGA GGCGGCCGGCCTTCCCTCGGAAGCTTCGAAGGTTGTTATGAAAGACCTCG CCAGGCTTAAGAAGATGCATCCCTCTCAGCCGGAGTACACGGTGCGATTT ATTTAGCCTAGATCTCCGGAGGCGATGCAGTTGCGCTGTTGCTGTTGCTG TCACGAGGGAGAAAATGATTGAGGCGGTGGACGGACGGACGGACGGACGG GTTACTTTCGTATCCCCGCCATGCTGTATATTCGTGTACAGCACCGCACC GCGCGGAATAGTTTGTGCTCGGCATGGAGGCGAGATAAGAGAGTAGTATA CGCGGTGACCAAGGCTGCAGCACAAAGCGCGTATATTATTCCCAAAGGCT TGATTTCTGAAACGCCTTGCCATTATATTACAGAGCTGATTTAGAATTTA TTTTTAAGCCTTACATTGTATTAGAATTTTCTGAAAAACCGTGCTCCGGT ATGTATATGCAGTAGGTATTCCTCCCCACCCTTCCTTCAACCCGGGCGTC CCGCGCGTGGTTTTCGATGCCGCTGCCTATGACGACGGCGCCGCCGACGC CTCGCAAGGTTGTTCGTATGTACCTCGAGACGGTCGCAGAGCTGCCCTGG AATCGACTCTCCGAGGAGACGTACGATATCAGGAGAGCGCAGATACAGCT CGACAGGGACCACTACGGCCTCCACAAGGCACGATCTTGTTCCGACATAA CATTCTCTCTTGTGACACGCAGATCTAGCCATTCTCTGTGCCTCTTGAGT TTGACCTATATGTCTTCCTGTCTGCCCTAGCACTACCGGCAACATGCGAC ATGTGGGGTTGTAAGGCGGCGAGGCGGTGGAGTTCGAGGTGGATATGTAA TCACTCGAGGGGTCCCTTGAACAAGCGGGACGAGGAGATGCGAAGAGTTC ACTGGATTGTGTAGATTTTCCCCCCCCGCCACCCCCCCCCCCCCCCCCCT CCCCCCCCCTGGACCACCCCAGCAGCCCGGCCACCACTGAATCGCTTAGG TGAAGCAGCGCATCGCGGAGTACATTGCCGTACGATCTCTCATATCGGAC AACAAGGGCTCCATCCTGTGCCTCGTTGGTCCTCCCGGAGTTGGCAAGAC TTCGCTGGGGAGATCGATCGCCTCGGCGCTGAACCGGGAGTGAGTCGGGG GTTGTAGCGGGTCTGGAAGGCCGCTAGGGTGAGGTGGGATGGAGGTCAGG TGGGGGTCAAAGTCGGGTATAAGCGGTCCAGGAGCGCGTGTGAGAACGCA CCCAGAGAAGGTATTTTCGAAACGGGCGTAGAGTGCAGTGGCTGCGACTC TGTTGGCCCGGTCGGTGGCAGCTTGTGTCTCCCGCGTTTGGATGTTTCAG TCTGGATATGCGGCAGCTCTAAGCATTATTCCATTGAGCTTTTGAGTGGT GTTAATTGATCGCGATCGACTGGACGCTGACCGCGCATCAATGGCATGTA GTCAGTTGGTCCCTGCCAACCGCGCATGTGGCACCATTGCCTCCTTACTG CAAACCCCAACATTTAATATTCCTCATGGGTCGACACACACACACACACA CACACGTCTGATCAGGGTTTTTTGTAGAAAATATTATCCCCAATTGGAAG GATCAATATCAATACTATTAATAGAGAGTAGCCTAGAATAACTAACACGA CAGGGCCGGATTGCCTTAGCGGTTATGTGCAATTTAATAAATACACACAT ACATACACCCACTGCAGGTTTCAGCGCCTCTCCTTGGGAGGCGTGCACGA CGAGGCAGAAATCCGCGGCCATCGACGGACCTACATCGGCGCCATGCCCG GCGGCATCGTCCGTTGCCTGCGCCGCGCGGGGGCTCGCAATCCCGTTCTC CTCCTGGACGAGGTCGACAAGATCGGCTCCAACATCAGGGGCGGAGACCC CTCTGCCGCCCTGCTGGAGGTGCTTGACCCAGAGCAGCACGACAGCTTCA CGGACCACTACCTAAACGTGCCGTTTGACCTGTCGTCTGTGCTGTTCGTG GCGACGGCCAACAAGGTGGACACCATTCCCGAGGCCCTCCTGGACCGCCT GGAGGTGAGCTGAGGGCGTGCAGGCAGGGTGTAGCTGGAAGCTGTCGTTG CCGCCGTTATTGCTGTTGTTGCGGAGCAGCCGCTGGCCGAAACGGGTAGA AATAATCATGGTGGTGCGCGTCTCGTGGGGGTCGGGCGAGTTCGAATGAG GCAAGTGTAGTGTGTCGTGTATGTGTGTTTGTGTTTTTATTAAATTGTGC ATAACCGCGCAATCCGGCCCTCACATACTAGTTAGTTATTATATGCTACT CGCATTGATCCTTCCGATGGGGGATCAATAATATTTGCTTTCAAAACATC TGATCAGACGTGACAAAGGAGACATGCTCTCTAGAGCTCATATATAAGCC CTCAGTACCTTGCGCTTCCTTTTCTTCTTCCTTGTTCGCTATATAGCTTT GGTCGACCCCTATCGGACCAACGATTACGTCTGGTACTCCAATTCCCCCC GTTTTCTACCGTCATATGCTTCTTCGCCTTTCCTCTCCCCTCTCCCCTCT CCCCTCTTCGATCCCGCCTCTCGCTTCGCCCCGCTCGCTTCCCGTCCCTC GCTTCGTCATTCGCATGAAATTATGCTCTCTATGCCTTGGATGCGGGTTA CCCATTAGCGACTCCTCCTCTCTCGCGTCTTCCTCCCCACCTGTTCTATC CCTTGAAAGGAAAACGGGCTTTCTATCCCATCTACCCCCCTCTACGTTCT CGTCCCCGTCTCCATCTCTGCCCCCGACCGCGTCCTTATCCCCGCCCCCG CCCCTGTCTCCGTCCTCATCAACTTTCCCCTTCTCCGTCGCCGTATGTGT GTATGTGTGTGTATGTATTTATTAAATTGCACATAACCGCTAAGGCAATC CGGCCCTCCCTGTAATCTACTCATTCTAGTGTGTGTGTATGTGTGTGACA TCCACACTATCCACTGCAGCAATAGCCTTTAGTCTCTCTCTCTCTCTATA TATATGTATTTATTACTCAAATGCTCCTGTTGATTTACCCCCTCCCACCC CGCTCACGAACCACTTTTCATTTAATTCATTCGCTCAGGTGATCAATATC CCGGGCTACACTCTTGAAGAAAAGGTGCGGATTGCCGAGGCGTACCTAAT CCCCAAGCAGATGGACAAGAACGGCGTCAGCACGGAGCACGTCATGCTGC CCCGAAGCACGGTCCTAAGGGTCGCGTCCTCGTACACTCGGGAGGCGGGA GTGAGACAGCTGGAGCGGGAGCTCGCCGCGATCTGTCGGCACGTCGCCCT CAAGGTGATTTGG
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Coding sequence (CDS) from alignment at H-elongata_contig55478:146..3508-

>mRNA_H-elongata_contig55478.12963.1 ID=mRNA_H-elongata_contig55478.12963.1|Name=mRNA_H-elongata_contig55478.12963.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1944bp|location=Sequence derived from alignment at H-elongata_contig55478:146..3508- (Himanthalia elongata Himel1 dioecious)
ATGGCCGCATTAGAAACGAGGCTCGAGGCGGCCGGCCTTCCCTCGGAAGC
TTCGAAGGTTGTTATGAAAGACCTCGCCAGGCTTAAGAAGATGCATCCCT
CTCAGCCGGAGTACACGATGGCCGCATTAGAAACGAGGCTCGAGGCGGCC
GGCCTTCCCTCGGAAGCTTCGAAGGTTGTTATGAAAGACCTCGCCAGGCT
TAAGAAGATGCATCCCTCTCAGCCGGAGTACACGGTTGTTCGTATGTACC
TCGAGACGGTCGCAGAGCTGCCCTGGAATCGACTCTCCGAGGAGACGTAC
GATATCAGGAGAGCGCAGATACAGCTCGACAGGGACCACTACGGCCTCCA
CAAGGCACGATCTTGTTCCGACATAACATTCTCTCTTGTTGTTCGTATGT
ACCTCGAGACGGTCGCAGAGCTGCCCTGGAATCGACTCTCCGAGGAGACG
TACGATATCAGGAGAGCGCAGATACAGCTCGACAGGGACCACTACGGCCT
CCACAAGGCACGATCTTGTTCCGACATAACATTCTCTCTTGTGAAGCAGC
GCATCGCGGAGTACATTGCCGTACGATCTCTCATATCGGACAACAAGGGC
TCCATCCTGTGCCTCGTTGGTCCTCCCGGAGTTGGCAAGACTTCGCTGGG
GAGATCGATCGCCTCGGCGCTGAACCGGGAGTGAAGCAGCGCATCGCGGA
GTACATTGCCGTACGATCTCTCATATCGGACAACAAGGGCTCCATCCTGT
GCCTCGTTGGTCCTCCCGGAGTTGGCAAGACTTCGCTGGGGAGATCGATC
GCCTCGGCGCTGAACCGGGAGTTTCAGCGCCTCTCCTTGGGAGGCGTGCA
CGACGAGGCAGAAATCCGCGGCCATCGACGGACCTACATCGGCGCCATGC
CCGGCGGCATCGTCCGTTGCCTGCGCCGCGCGGGGGCTCGCAATCCCGTT
CTCCTCCTGGACGAGGTCGACAAGATCGGCTCCAACATCAGGGGCGGAGA
CCCCTCTGCCGCCCTGCTGGAGGTGCTTGACCCAGAGCAGCACGACAGCT
TCACGGACCACTACCTAAACGTGCCGTTTGACCTGTCGTCTGTGCTGTTC
GTGGCGACGGCCAACAAGGTGGACACCATTCCCGAGGCCCTCCTGGACCG
CCTGGAGGTTTCAGCGCCTCTCCTTGGGAGGCGTGCACGACGAGGCAGAA
ATCCGCGGCCATCGACGGACCTACATCGGCGCCATGCCCGGCGGCATCGT
CCGTTGCCTGCGCCGCGCGGGGGCTCGCAATCCCGTTCTCCTCCTGGACG
AGGTCGACAAGATCGGCTCCAACATCAGGGGCGGAGACCCCTCTGCCGCC
CTGCTGGAGGTGCTTGACCCAGAGCAGCACGACAGCTTCACGGACCACTA
CCTAAACGTGCCGTTTGACCTGTCGTCTGTGCTGTTCGTGGCGACGGCCA
ACAAGGTGGACACCATTCCCGAGGCCCTCCTGGACCGCCTGGAGGTGATC
AATATCCCGGGCTACACTCTTGAAGAAAAGGTGCGGATTGCCGAGGCGTA
CCTAATCCCCAAGCAGATGGACAAGAACGGCGTCAGCACGGAGCACGTCA
TGCTGCCCCGAAGCACGGTCCTAAGGGTCGCGTCCTCGTACACTCGGGAG
GCGGGAGTGAGACAGCTGGAGCGGGAGCTCGCCGCGATCTGTCGGCACGT
CGCCCTCAAGGTGATTTGGGTGATCAATATCCCGGGCTACACTCTTGAAG
AAAAGGTGCGGATTGCCGAGGCGTACCTAATCCCCAAGCAGATGGACAAG
AACGGCGTCAGCACGGAGCACGTCATGCTGCCCCGAAGCACGGTCCTAAG
GGTCGCGTCCTCGTACACTCGGGAGGCGGGAGTGAGACAGCTGGAGCGGG
AGCTCGCCGCGATCTGTCGGCACGTCGCCCTCAAGGTGATTTGG
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