mRNA_H-elongata_contig5534.12950.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig5534.12950.1
Unique NamemRNA_H-elongata_contig5534.12950.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig5534.12950.1 vs. uniprot
Match: A0A6H5KAT5_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAT5_9PHAE)

HSP 1 Score: 348 bits (892), Expect = 1.120e-108
Identity = 183/313 (58.47%), Postives = 246/313 (78.59%), Query Frame = 1
Query:   13 HQVMFISSVSLIPVVSTWAIFSTNVFDEVANTYHPTTTSSYITISMNVLEFLIICFIWFVYARQLKSVRRQFNEYKSLKRTLLLITLTLISYPIVVIFRLQDDLLLQRRMTILCENDSEGRMVKMKNPLITTHIILWGTIQKPFIIKLLGNRDYLLTFTKGFSEMSSPAQLKTSLQEQLSVEQLRIEFRRYTKSKVAQELVDFYINPLDREEIQNIFERQARTMSIVEQYIKQDAPDQVNISEDCREKVLRTDVTAYDIFDDARAEVLAVMEVSMNMVTDRFALTEGFRRIVSTSEEEQREIHLLRAEGMLVP 951
            HQ++F+SS+SLIPVV+TWA+  T  FDEVANT   TT S+ + + M+ L FL IC++WFV ARQLK VR+QFNEY+++KRTLL +T+TL SY ++V++ L D+L+L RR+++               PL+TT+I+LWG+I++PF++K+LG+ +YL ++TKGF+++ SPAQLK SL EQLSV+QLR EFRRY K+KVAQEL+DFY++ LDREE+ + FERQA TM IV+QYIK+ A DQVN+S  CREK+L TDVTA+DIFD+ARAEVLAVME +       F  TEGFRRI++ S++EQRE+ LLRA GML+P
Sbjct:  115 HQILFMSSLSLIPVVATWAVPHTGYFDEVANTCSTTTFSTIVVLGMDALGFLAICYLWFVCARQLKWVRKQFNEYETMKRTLLYMTITLASYGVIVVYLLADNLVLGRRVSVFY-------------PLLTTYILLWGSIREPFMMKILGDDEYLWSYTKGFAQLPSPAQLKASLAEQLSVDQLRDEFRRYIKTKVAQELIDFYLDSLDREEVADFFERQAATMRIVDQYIKEGARDQVNVSGACREKILATDVTAFDIFDEARAEVLAVMETNFRR---DFVTTEGFRRILNASKQEQRELRLLRAGGMLLP 411          
BLAST of mRNA_H-elongata_contig5534.12950.1 vs. uniprot
Match: D7FIS3_ECTSI (Similar to retinally abundant regulator of G-protein signaling hRGS-r n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIS3_ECTSI)

HSP 1 Score: 298 bits (763), Expect = 4.360e-95
Identity = 163/271 (60.15%), Postives = 203/271 (74.91%), Query Frame = 1
Query:  133 YITISMNVLEFLIICFIWFVYARQLKSVRRQFNEYKSLKRTLLLITLTLISYPIVVIFRLQDDLLLQRRMTILCENDSEGRMVKMKNPLITTHIILWGTIQKPFIIKLLGNRDYLLTFTKGFSEMSSPAQLKTSLQEQLSVEQLRIEFRRYTKSKVAQELVDFYINPLDREEIQNIFERQARTMSIVEQYIKQDAPDQVNISEDCREKVLRTDVTAYDIFDDARAEVLAVMEVSMNMVTDRFALTEGFRRIVSTSEEEQREIHLLRAEGML 945
            Y T+ MN L    IC++WFV  R+LKSVR+QFNEY+++KRTLL +TL L+SY +VV+  L    +  RR+ IL              P+ITT+I+LWG+I++PF+ K+LG+ +YL ++TKGFSE+ SPAQLK SL EQLSVEQLR EFR+Y K+KVAQEL+DFY++ LDREE+   FERQA TM IVE+YI++DAPDQVNISE+CREK+L TDVTAYDIFD+ARAEVL VME +       F  TEGFRRI   SE E REI LLRA GML
Sbjct:    2 YPTLGMNALGMYGICYLWFVCIRRLKSVRKQFNEYQTMKRTLLYLTLALLSYALVVVVLLAGQHVTVRRVAILY-------------PVITTYILLWGSIREPFMKKILGDDEYLWSYTKGFSELPSPAQLKASLAEQLSVEQLRDEFRQYIKTKVAQELIDFYLDSLDREEVMGFFERQAATMRIVERYIREDAPDQVNISEECREKILATDVTAYDIFDEARAEVLVVMETNFQR---EFVTTEGFRRIADASEVEHREIRLLRAGGML 256          
BLAST of mRNA_H-elongata_contig5534.12950.1 vs. uniprot
Match: A0A6H5K0N5_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0N5_9PHAE)

HSP 1 Score: 294 bits (752), Expect = 3.730e-94
Identity = 175/334 (52.40%), Postives = 227/334 (67.96%), Query Frame = 1
Query:    1 FPIRHQVMFISSVSLIPVVSTWAIFSTNVFDEVANTYHPTTTSSYITISMNVLEFLIICFIWFVYARQLKSVRRQFNEYKSLKRTLLLITLTLISYPIVVIFRLQDDLLLQRRMTILCENDSEGRMVKMKNPLITTHIILWGTIQKPFIIKLLGNRDYLLTFTKGFSEMSSPAQ-----------------LKTSLQEQLSVEQLRIEFRRYTKSKVAQELVDFYINPLDREEIQNIFERQARTMSIVEQYIKQDAPDQVNISEDCREKVLRTDVTAYDIFDDARAEVLAVMEVSMNMVTDRFALTEGFRRIVSTSEEEQREIHLLRAEGMLVP 951
            +P ++QV+ +SS+SL P+++   +   + FDE  N+ + TT S  + ++MN L F +IC++WFV ARQL+ VR+QFNEY+++K TL  +TL L SY  VV   L +  +  RR+ I+              P++TT+ +LWG+I +P   KL G+ +YL +FTKGFSEM SPAQ                 LK SL EQLSV+QLR+EFRRY ++ VAQELVDFY++ LDREEI+  F RQA TM IVEQYI++  PDQVNIS +CRE++L TDVTAYDIFD ARAEVLAVME   N   D F  TEGFRRIV  SE EQRE+ LLRAEG+LVP
Sbjct:   13 WPAKYQVLLMSSISLGPLLAAILVPDLHFFDETVNSCNTTTDSRNVVLAMNALGFYVICYLWFVCARQLRWVRKQFNEYEAMKWTLSCLTLLLFSYAAVVAIILNNRHVYVRRVAIVY-------------PVLTTYTLLWGSIGEPIKRKLGGDTEYLNSFTKGFSEMPSPAQVRKLPPAARDSSNDLVLLKASLAEQLSVQQLRVEFRRYVETMVAQELVDFYLDSLDREEIKGYFARQAATMRIVEQYIREGGPDQVNISGECREEILSTDVTAYDIFDRARAEVLAVMET--NFQRD-FVETEGFRRIVDASELEQREMRLLRAEGVLVP 330          
BLAST of mRNA_H-elongata_contig5534.12950.1 vs. uniprot
Match: D7FTZ9_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTZ9_ECTSI)

HSP 1 Score: 280 bits (717), Expect = 1.300e-88
Identity = 161/314 (51.27%), Postives = 214/314 (68.15%), Query Frame = 1
Query:   10 RHQVMFISSVSLIPVVSTWAIFSTNVFDEVANTYHPTTTSSYITISMNVLEFLIICFIWFVYARQLKSVRRQFNEYKSLKRTLLLITLTLISYPIVVIFRLQDDLLLQRRMTILCENDSEGRMVKMKNPLITTHIILWGTIQKPFIIKLLGNRDYLLTFTKGFSEMSSPAQLKTSLQEQLSVEQLRIEFRRYTKSKVAQELVDFYINPLDREEIQNIFERQARTMSIVEQYIKQDAPDQVNISEDCREKVLRTDVTAYDIFDDARAEVLAVMEVSMNMVTDRFALTEGFRRIVSTSEEEQREIHLLRAEGMLVP 951
            + Q+  +SS+SL+P +    +    VFDE  N+ + T+TS  + + MN + F  ICF+WFV  RQL+ VR+QFNEY+++K TL  + L ++SY + V      +++L  +  +L       R + +  P++TTH +LWG+I +P + K  G+R+YL +FT+GFSEM SPAQLK SL EQLSVEQLR EFR Y ++KVAQELV+FY++ LDREEI   F RQA TM IV +YI+  AP+QVNISE CRE+++ T+VTAYDIFD ARAEVLAVME         F  TEGFRRI + SE EQRE  LLRA G L P
Sbjct:  124 KGQIFLLSSISLVPPLIALLVPGAYVFDETINSCNTTSTSRTVGLGMNAVGFYTICFLWFVCGRQLRRVRKQFNEYEAIKWTLSCLILLVLSYTVGV------NIILDNKHHVL------ARRLAIVYPVLTTHTLLWGSIGEPLLKKWEGDREYLWSFTRGFSEMPSPAQLKASLAEQLSVEQLRDEFRGYMRTKVAQELVNFYLDSLDREEIHGFFGRQAATMRIVARYIRDGAPEQVNISEACREEIVSTNVTAYDIFDRARAEVLAVMEAEFKA---EFVETEGFRRIANASELEQREKRLLRAGGFLPP 422          
BLAST of mRNA_H-elongata_contig5534.12950.1 vs. uniprot
Match: A0A6H5JJQ0_9PHAE (RGS domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JJQ0_9PHAE)

HSP 1 Score: 279 bits (713), Expect = 1.130e-87
Identity = 168/345 (48.70%), Postives = 215/345 (62.32%), Query Frame = 1
Query:    1 FPIRHQVMFISSVSLIPVVSTWAIFSTNVFDEVANTYHPTTTSSYITISMNVLEFLIICFIW----------------------------FVYARQLKSVRRQFNEYKSLKRTLLLITLTLISYPIVVIFRLQDDLLLQRRMTILCENDSEGRMVKMKNPLITTHIILWGTIQKPFIIKLLGNRDYLLTFTKGFSEMSSPAQLKTSLQEQLSVEQLRIEFRRYTKSKVAQELVDFYINPLDREEIQNIFERQARTMSIVEQYIKQDAPDQVNISEDCREKVLRTDVTAYDIFDDARAEVLAVMEVSMNMVTDRFALTEGFRRIVSTSEEEQREIHLLRAEGMLVP 951
            +P ++Q+M +SS+SL P +    +    VFDE  N    T+TS  +T++MN + F  IC+IW                            FV  RQL+ VR+QFNEY+++K TL  +TL L SY +VV+  L    ++ RR+ I+              P +TTH +LWG+I +P + K   + +YL +FTKGFS++ SPAQLK SL EQLSVEQLR EFRRY ++KVAQELVDFY++ LDREEI+  F RQA TM IV QYI++ APDQVNIS +CRE++L T VTAYDIFD AR EVL VME +       F  TEGFRRIV  SE EQRE  LLRA G L P
Sbjct:  121 WPAKYQIMLLSSISLTPALVALLVPGAYVFDETVNLCTTTSTSRTVTLAMNAVGFYTICYIWWRQSYVHVPATGLMRAVCALVSLAAKTRFVCTRQLRWVRKQFNEYETMKWTLSCLTLLLFSYAVVVVVVLDGQHVIVRRVAIVY-------------PALTTHTVLWGSIGEPVLKKWTRDEEYLWSFTKGFSDLPSPAQLKASLAEQLSVEQLRAEFRRYIETKVAQELVDFYLDSLDREEIKEYFARQAVTMRIVAQYIREGAPDQVNISGECREEILSTHVTAYDIFDRARVEVLTVMETNFQR---EFVETEGFRRIVEASELEQRENRLLRAGGFLPP 449          
BLAST of mRNA_H-elongata_contig5534.12950.1 vs. uniprot
Match: D7FTZ7_ECTSI (Similar to regulator of G-protein signaling 16 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTZ7_ECTSI)

HSP 1 Score: 278 bits (712), Expect = 1.700e-87
Identity = 158/272 (58.09%), Postives = 199/272 (73.16%), Query Frame = 1
Query:  136 ITISMNVLEFLIICFIWFVYARQLKSVRRQFNEYKSLKRTLLLITLTLISYPIVVIFRLQDDLLLQRRMTILCENDSEGRMVKMKNPLITTHIILWGTIQKPFIIKLLGNRDYLLTFTKGFSEMSSPAQLKTSLQEQLSVEQLRIEFRRYTKSKVAQELVDFYINPLDREEIQNIFERQARTMSIVEQYIKQDAPDQVNISEDCREKVLRTDVTAYDIFDDARAEVLAVMEVSMNMVTDRFALTEGFRRIVSTSEEEQREIHLLRAEGMLVP 951
            + ++MN L F  IC++WFV ARQL+ VR+QFNEY+++K TL  +TL L SY  VV   L +  +  RR+ I+              P++TT+ +LWG+I +P   KL G+ +YL +FTKGFSEM SPAQLK SL EQLSV+QLR+EFR+Y ++ VAQELVDFY++ LDREEI+  F RQA TM IVEQYI++ +PDQVNIS +CRE++L TDVTAYDIFD ARAEVLAVME   N   D F  TEGFRRIV  SE EQR++ LLRAEG+LVP
Sbjct:  126 VVLAMNALGFYAICYLWFVCARQLRWVRKQFNEYEAMKWTLSCLTLLLFSYAAVVAIVLNNQHVYVRRVAIVY-------------PVLTTYTLLWGSIGEPIKRKLAGDTEYLYSFTKGFSEMPSPAQLKASLAEQLSVQQLRVEFRKYVETMVAQELVDFYLDSLDREEIKGYFGRQAATMRIVEQYIREGSPDQVNISGECREEILSTDVTAYDIFDRARAEVLAVMET--NFQRD-FIETEGFRRIVDASELEQRQMRLLRAEGVLVP 381          
BLAST of mRNA_H-elongata_contig5534.12950.1 vs. uniprot
Match: D7FTZ6_ECTSI (Similar to regulator of G-protein signaling 16 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTZ6_ECTSI)

HSP 1 Score: 273 bits (699), Expect = 3.180e-86
Identity = 156/299 (52.17%), Postives = 210/299 (70.23%), Query Frame = 1
Query:    1 FPIRHQVMFISSVSLIPVVSTWAIFSTNVFDEVANTYHPTTTSSYITISMNVLEFLIICFIWFVYARQLKSVRRQFNEYKSLKRTLLLITLTLISYPIVVIFRLQDDLLLQRRMTILCENDSEGRMVKMKNPLITTHIILWGTIQKPFIIKLLGNRDYLLTFTKGFSEMSSPAQLKTSLQEQLSVEQLRIEFRRYTKSKVAQELVDFYINPLDREEIQNIFERQARTMSIVEQYIKQDAPDQVNISEDCREKVLRTDVTAYDIFDDARAEVLAVMEVSMNMVTDRFALTEGFRRIVSTS 897
            +P ++QVM +SS+SL P+++   +   + FDE  N+ + TT S  + ++MN L F +IC++WFV  RQL+ VR+QFNEY+++K TL  +TL L SY  VV   L +  +L RR+ I+              P+++T+ +LWG++ +P + K  G+  YL +FTKGFSEM SPAQLK SL EQLSVEQLR+EFRRY ++KVAQELVDFY++ LDREEI+  F RQA TM IVEQYI++ +PDQVNIS +CRE++L TDVTAYDIFD ARAEVLAVME ++   TD  A  E    +V TS
Sbjct:  105 WPAKYQVMVMSSISLGPLLAAVLVPDLHFFDETVNSCNTTTDSRNVVLAMNALGFYLICYLWFVCTRQLRWVRKQFNEYEAMKWTLSCLTLLLFSYAAVVAIILNNQHVLVRRVAIVY-------------PVLSTYTLLWGSVGEPVVKKFTGDEGYLWSFTKGFSEMPSPAQLKASLAEQLSVEQLRVEFRRYIETKVAQELVDFYLDSLDREEIKGYFGRQAATMRIVEQYIREGSPDQVNISGECREEILSTDVTAYDIFDRARAEVLAVMEATL---TDLGAKEETMIVLVRTS 387          
BLAST of mRNA_H-elongata_contig5534.12950.1 vs. uniprot
Match: D7FU00_ECTSI (Regulator of G-protein signaling 13 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU00_ECTSI)

HSP 1 Score: 271 bits (692), Expect = 3.420e-86
Identity = 160/313 (51.12%), Postives = 208/313 (66.45%), Query Frame = 1
Query:   10 RHQVMFISSVSLIPVVSTWAIFSTNVFDEVANTYHPTTTSSYITISMNVLEFLIICFIWFVYARQLKSVRRQFNEYKSLKRTLLLITLTLISYPIVVIFRLQDD-LLLQRRMTILCENDSEGRMVKMKNPLITTHIILWGTIQKPFIIKLLGNRDYLLTFTKGFSEMSSPAQLKTSLQEQLSVEQLRIEFRRYTKSKVAQELVDFYINPLDREEIQNIFERQARTMSIVEQYIKQDAPDQVNISEDCREKVLRTDVTAYDIFDDARAEVLAVMEVSMNMVTDRFALTEGFRRIVSTSEEEQREIHLLRAEGML 945
            R+Q+M +SS  L+P++ T  +    VFDE  N  + T+TS  + ++MN     IICF+WFV  RQL+ VR+QFNEYK + RTLL +TL  +SY +VV+  L +   +L RR+ I+    S G +      L++ ++      ++P + K  G+ +YL +FTKGFSE+ SPAQLK SL EQLSVEQLRIEFR Y ++KVA+ELVDFY+  LDREEI   F RQA TM IV +YI++ AP+QVNIS  CRE +L TDVTAYDIFD ARAEVLA+ME         F  TEGFRRI   S  E RE  LL+A G+L
Sbjct:   11 RYQIMLLSSPCLVPLLVTLLVPGAYVFDEAVNLCNTTSTSRTVVLAMNAFGCCIICFLWFVCVRQLRWVRKQFNEYKEMTRTLLCVTLISVSYALVVVVALDNSHQVLARRLAIVWRGKSSGEIAGGDLHLVSLYLGQERLAERPLVKKWEGDEEYLWSFTKGFSELPSPAQLKASLAEQLSVEQLRIEFRGYMQTKVARELVDFYLESLDREEIHGFFGRQAVTMRIVARYIREGAPEQVNISGACREDILSTDVTAYDIFDRARAEVLALMEGDFKA---GFVETEGFRRIAVASYLEDRENRLLQAGGLL 320          
BLAST of mRNA_H-elongata_contig5534.12950.1 vs. uniprot
Match: A0A6H5KB09_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB09_9PHAE)

HSP 1 Score: 268 bits (685), Expect = 2.790e-82
Identity = 164/315 (52.06%), Postives = 219/315 (69.52%), Query Frame = 1
Query:   10 RH--QVMFISSVSLIPVVSTWAIFSTNVFDEVANTYHPTTTSSYITISMNVLEFLIICFIWFVYARQLKSVRRQFNEYKSLKRTLLLITLTLISYPIVVIFRLQDDLLLQRRMTILCENDSEGRMVKMKNPLITTHIILWGTIQKPFIIKLLGNRDYLLTFTKGFSEMSSPAQLKTSLQEQLSVEQLRIEFRRYTKSKVAQELVDFYINPLDREEIQNIFERQARTMSIVEQYIKQDAPDQVNISEDCREKVLRTDVTAYDIFDDARAEVLAVMEVSMNMVTD-RFALTEGFRRIVSTSEEEQREIHLLRAEGML 945
            RH  Q++ +SS+SLIPVV+ WAI +T  FDEV N     + S+ + + MN L FL+I ++WFV ARQLK VR+QFNEY S+KRTLL +T+TL SY +VV+F L D++ + RR  +               P++TT+I+LW +I++PF+ K+LGN +YL ++T GF+++ SPAQLK SL EQLSV+QLR EFRRY K+KVAQEL+DF ++ LDREE+ + FERQA TM IV+QYI++ + DQVN+S    EK+L TDVTA DIFD+ARAEVL VME    +V D R     G  R      E   E+ LLR+ GML
Sbjct:   73 RHSDQILSMSSLSLIPVVAAWAIPNTGDFDEVENACFTLSVSTVVILGMNGLGFLMIFYLWFVCARQLKWVRKQFNEYDSMKRTLLYMTITLASYGVVVLFLLADNVTVSRRAAL-------------GYPVMTTYILLWVSIREPFMKKILGNDEYLGSYTHGFAQLPSPAQLKASLAEQLSVDQLRDEFRRYIKTKVAQELIDFNLDSLDREEMADFFERQAVTMRIVDQYIREGSIDQVNVSGAYWEKILATDVTAIDIFDEARAEVLVVME---RLVDDGRIPPYHGCFR------EGAAELSLLRSGGML 365          
BLAST of mRNA_H-elongata_contig5534.12950.1 vs. uniprot
Match: D7FTZ5_ECTSI (Signal transducer, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTZ5_ECTSI)

HSP 1 Score: 256 bits (655), Expect = 1.430e-78
Identity = 159/314 (50.64%), Postives = 203/314 (64.65%), Query Frame = 1
Query:   10 RHQVMFISSVSLIPVVSTWAIFSTNVFDEVANTYHPTTTSSYITISMNVLEFLIICFIWFVYARQLKSVRRQFNEYKSLKRTLLLITLTLISYPIVVIFRLQDDLLLQRRMTILCENDSEGRMVKMKNPLITTHIILWGTIQKPFIIKLLGNRDYLLTFTKGFSEMSSPAQLKTSLQEQLSVEQLRIEFRRYTKSKVAQELVDFYINPLDREEIQNIFERQARTMSIVEQYIKQDAPDQVNISEDCREKVLRTDVTAYDIFDDARAEVLAVMEVSMNMVTDRFALTEGFRRIVSTSEEEQREIHLLRAEGMLVP 951
            R QV+ +SS  LIP++          FDE AN+   +T ++ + + M+   F +I  +W V ARQL+ VR+QFNEY+++K TL  +T+ L SY IVV   L       RR+ I  E                           PF +KL GN +YL +FT+GFSEM SPAQLK +L +QLSVEQLR+EFRRY ++KVA ELVDFY++ LDREEI   F RQA TM IV+QYI++ APDQVNIS +CR+++L T VTAYDIFD ARAEVL VME   N  TD F  TEGFRRIV+ +E EQR+I LL+AEG L+P
Sbjct:  101 RVQVLLLSSTGLIPLLLAILDPDLFFFDETANSCGTSTGATRVVLGMDAFGFSMILCLWLVCARQLRWVRKQFNEYEAMKWTLSCLTILLFSYAIVVAIILDGHHCYVRRVAIAWE---------------------------PFKMKLTGNAEYLYSFTQGFSEMPSPAQLKANLAQQLSVEQLRVEFRRYIEAKVAHELVDFYLDSLDREEIMEYFARQAATMRIVDQYIREGAPDQVNISGECRDEILSTHVTAYDIFDRARAEVLDVMET--NFQTD-FVETEGFRRIVNAAELEQRQIRLLQAEGFLLP 384          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5534.12950.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
A0A6H5KAT5_9PHAE1.120e-10858.47RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FIS3_ECTSI4.360e-9560.15Similar to retinally abundant regulator of G-prote... [more]
A0A6H5K0N5_9PHAE3.730e-9452.40RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FTZ9_ECTSI1.300e-8851.27RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JJQ0_9PHAE1.130e-8748.70RGS domain-containing protein n=3 Tax=Ectocarpus T... [more]
D7FTZ7_ECTSI1.700e-8758.09Similar to regulator of G-protein signaling 16 n=1... [more]
D7FTZ6_ECTSI3.180e-8652.17Similar to regulator of G-protein signaling 16 n=1... [more]
D7FU00_ECTSI3.420e-8651.12Regulator of G-protein signaling 13 n=1 Tax=Ectoca... [more]
A0A6H5KB09_9PHAE2.790e-8252.06RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FTZ5_ECTSI1.430e-7850.64Signal transducer, putative n=1 Tax=Ectocarpus sil... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig5534contigH-elongata_contig5534:6795..11048 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score287.3
Seed ortholog evalue8.3e-75
Seed eggNOG ortholog2880.D7FU04
Preferred nameRGS1
KEGG koko:K16449
GOsGO:0001101,GO:0003674,GO:0004888,GO:0004930,GO:0005096,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005768,GO:0005886,GO:0006950,GO:0007154,GO:0007165,GO:0007186,GO:0008047,GO:0008150,GO:0009414,GO:0009415,GO:0009628,GO:0009719,GO:0009725,GO:0009737,GO:0009743,GO:0009746,GO:0009749,GO:0009756,GO:0009987,GO:0010008,GO:0010033,GO:0010035,GO:0010182,GO:0012505,GO:0016020,GO:0023052,GO:0030234,GO:0030695,GO:0031090,GO:0031410,GO:0031982,GO:0033993,GO:0034284,GO:0038023,GO:0042127,GO:0042221,GO:0043085,GO:0043087,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043547,GO:0044093,GO:0044422,GO:0044424,GO:0044433,GO:0044440,GO:0044444,GO:0044446,GO:0044464,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051336,GO:0051345,GO:0051716,GO:0060089,GO:0060589,GO:0065007,GO:0065009,GO:0070887,GO:0071310,GO:0071322,GO:0071944,GO:0097305,GO:0097708,GO:0098588,GO:0098772,GO:0098805,GO:1901700,GO:1901701
EggNOG free text desc.Regulator of G protein signaling domain
EggNOG OGs2CNEE@1,2QVMV@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000
Hectar predicted targeting categorysignal peptide
Exons7
Model size951
Cds size930
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig5534.12950.1prot_H-elongata_contig5534.12950.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig5534 6795..11027 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930902.4075644-CDS-H-elongata_contig5534:6794..68921622930902.4075644-CDS-H-elongata_contig5534:6794..6892Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5534 6795..6892 -
1691679617.9666448-CDS-H-elongata_contig5534:6794..68921691679617.9666448-CDS-H-elongata_contig5534:6794..6892Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5534 6795..6892 -
1622930902.4297566-CDS-H-elongata_contig5534:7235..73621622930902.4297566-CDS-H-elongata_contig5534:7235..7362Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5534 7236..7362 -
1691679617.981134-CDS-H-elongata_contig5534:7235..73621691679617.981134-CDS-H-elongata_contig5534:7235..7362Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5534 7236..7362 -
1622930902.4496384-CDS-H-elongata_contig5534:7812..78661622930902.4496384-CDS-H-elongata_contig5534:7812..7866Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5534 7813..7866 -
1691679617.9995759-CDS-H-elongata_contig5534:7812..78661691679617.9995759-CDS-H-elongata_contig5534:7812..7866Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5534 7813..7866 -
1622930902.4709015-CDS-H-elongata_contig5534:9012..91621622930902.4709015-CDS-H-elongata_contig5534:9012..9162Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5534 9013..9162 -
1691679618.0085924-CDS-H-elongata_contig5534:9012..91621691679618.0085924-CDS-H-elongata_contig5534:9012..9162Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5534 9013..9162 -
1622930902.4867744-CDS-H-elongata_contig5534:9406..95371622930902.4867744-CDS-H-elongata_contig5534:9406..9537Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5534 9407..9537 -
1691679618.0169408-CDS-H-elongata_contig5534:9406..95371691679618.0169408-CDS-H-elongata_contig5534:9406..9537Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5534 9407..9537 -
1622930902.5170612-CDS-H-elongata_contig5534:9912..101181622930902.5170612-CDS-H-elongata_contig5534:9912..10118Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5534 9913..10118 -
1691679618.0251708-CDS-H-elongata_contig5534:9912..101181691679618.0251708-CDS-H-elongata_contig5534:9912..10118Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5534 9913..10118 -
1622930902.545978-CDS-H-elongata_contig5534:10863..110271622930902.545978-CDS-H-elongata_contig5534:10863..11027Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5534 10864..11027 -
1691679618.035327-CDS-H-elongata_contig5534:10863..110271691679618.035327-CDS-H-elongata_contig5534:10863..11027Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5534 10864..11027 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930902.5681567-UTR-H-elongata_contig5534:11027..110481622930902.5681567-UTR-H-elongata_contig5534:11027..11048Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig5534 11028..11048 -
1691679618.0438397-UTR-H-elongata_contig5534:11027..110481691679618.0438397-UTR-H-elongata_contig5534:11027..11048Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig5534 11028..11048 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig5534.12950.1

>prot_H-elongata_contig5534.12950.1 ID=prot_H-elongata_contig5534.12950.1|Name=mRNA_H-elongata_contig5534.12950.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=310bp
MFISSVSLIPVVSTWAIFSTNVFDEVANTYHPTTTSSYITISMNVLEFLI
ICFIWFVYARQLKSVRRQFNEYKSLKRTLLLITLTLISYPIVVIFRLQDD
LLLQRRMTILCENDSEGRMVKMKNPLITTHIILWGTIQKPFIIKLLGNRD
YLLTFTKGFSEMSSPAQLKTSLQEQLSVEQLRIEFRRYTKSKVAQELVDF
YINPLDREEIQNIFERQARTMSIVEQYIKQDAPDQVNISEDCREKVLRTD
VTAYDIFDDARAEVLAVMEVSMNMVTDRFALTEGFRRIVSTSEEEQREIH
LLRAEGMLVP
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mRNA from alignment at H-elongata_contig5534:6795..11048-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig5534.12950.1 ID=mRNA_H-elongata_contig5534.12950.1|Name=mRNA_H-elongata_contig5534.12950.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=4254bp|location=Sequence derived from alignment at H-elongata_contig5534:6795..11048- (Himanthalia elongata Himel1 dioecious)
TTCCCGATCAGACATCAGGTTATGTTCATATCCAGCGTAAGCCTCATTCC CGTGGTGTCTACATGGGCGATCTTCTCGACCAACGTGTTCGACGAGGTTG CCAACACATATCACCCTACGACAACTTCCTCCTACATTACTATATCAATG AACGTGTTGGAATTCCTTATCATCTGCTTCATATGGTAAGCGTTACTTAC GGAAGGCACAACATAAATGGCGGTCTCTAAAAAGCACTTACCTGCTGAGC CTAGGTTTTAACACTCGCCTTCATCCATCGTCATAATATACCGTAAACAC TTATCCTTCTCTGTGAGTGATCCTTCTTGACTTAAAGTATTTTAACCATG GCGATAGAAGTGCTCCAGGAAGAAAAGGGACGGAAATTCTGACCAATATC CAATATCCACCATTTAAAACTCCTTTACAAGAAATGCTTTACCGCTCGTT TTACCTTTCATCGAAGAAGCCTGAATTTAATTTGATTGAATTCTCAGACA AGCTAATGTCAAAATCCAGCCCGTGGTCAAAAGGTAGAAAAACACCATCC GGAAGGAAAAACGTTCAACGTACTCACAAAAGGAAACGGCGATGGTGCAT AATACTACTACTCGTANNNNNNNNNNGTCATTTCGCAAAAAAAAAAACAC ACACACACACACACAAAAGATAACACACATAAAATTATTAACACACTGCG TGTGGCTATCGGGGTGGTGGCCTATAGGATAGCGATTGAACGAAGAGCCA CGGGTTCAATTAAAAAACAAAACAAAAAAACGTAACGCCAGCGAAAGGCA ATATGACATCGGCAAGCAAAAAACGCCCGGAGGATAAATTCGCGCCACTC GTGGCTAATATGTGACCTAGAACATATTTCGTGTAGGCTGAATAAATCCC GCTGTGTCTGGTGTAAACCATCGCTATCAGGTTTGTGTACGCCCGGCAGC TGAAGTCCGTCCGCAGGCAGTTCAACGAATATAAGTCGTTGAAGCGGACA CTCCTGTTGATCACGCTGACGCTCATCAGCTACCCGATCGTTGTGATCTT CCGTCTTCAGGACGACCTTCTTCTTCAACGGCGTATGACAATCTTATGTG AGAATGACTCGGAAGGAAGAATGGTTAAAATGAAGAGTAGTGTGCGAAGC CTGGATGGCTTTGACATTGATGATGTCCTCTTTGTCGGTAGGGTTCAAGG CATCGAAAAATGCCTCACTTATACGTACGTGCGGTCGTGTCGTCCAGGGT GTTAATTTTCGGGAAAAACGGTTTAAATATAAAGTAGCTCGCATACTCTC TTGGTACATTTGTCGTTTGATCCTGCGTAGTTTGTCGAAAAAGCTAAAGC ACGTGTGTCGCAGATACCCGAACTATTTCAAAACACCTACAAAGGCCCAA GGGGATAATTGTCGATACTAACCAACAAAACAATTCACCTCTTATGTAGG CATATTCCAATAGACTGCCGTGGCCTCCTGTTTCTCGTACGCGCGTTCCG TCTCCTGGCAGACCCGCTGATTACCACGCACATAATCCTCTGGGGTACCA TCCAGAAGCCTTTTATAATAAAACTCCTGGGCAATCGTGACTACCTGCTG ACATTTACGAAAGGATTCTCGGAGATGTCTTCCCCAGCTCAGGTGTACCA CGTTTCCGGTCCAGACGGTACTGTCCCTCAGATAGAAGTCACGGTTGTTT TCTGGTAATAGTATATTTACCCTTCATCGAATAATGTTCGTTTCCCGTTT TGACCCCAGTCGGCTTGAAACGTTTTGAGAGGATAAAGTACAAATAGCTT TTTGGGGTGACTTTCCTATTCCCCTACGCTGCGTGAGACACTCTCCTTAT CCTGCTGTATCGTTTCGTACATTCGATGACTCGTAGCTGAAGACCAGCCT CCAAGAGCAGCTCTCAGTTGAACAGCTCAGGATCGAGTTCAGGCGCTATA CCAAAAGCAAGGTTGCTCAAGAGCTCGTGGATTTCTATATCAATCCACTC GATAGGGAGGAGATACAGAACATTTTTGAGCGTCAGGTGCACACTATCAC AAACGATGGCACTGACGCGCCAGACGTATTGAGGAGAGTTTGACGTGCTT ATGGTACTTACCAACCGCAAAGTACGCCGAACGTTGTACGTGTCTCATTT TGCTTTAAAGCTTGTGTTTTGATCAGAACGTCCCTTTGACGCCTTTGTCT GAAATCAATGACGGCGGTTTAAGGCAAAAATCGAAATTGGCGTCGTACGA CGAGGGGAGAAGGGGCAGGTCAAACTAGGACACAAATGATGAGGTATAAT TGAACAATTACCAAGCGCTGGCCACTCAGCATGCTTCCTTGGTAACGGAT AGTTCTCTCAATCAGGTTAGTTGTTTTTATAAAGGATCTGAACCAAACCG CCATACGTAAAGTGGTGCGAAGAATGCCAATATGCTCGACTACGACATAT AAACTTAAACTCTGCACCTTCGTGGGGGAATGATTTGGTGCATTGCGGGG AGCGGTCGTTACGTACGCCGTAAGAAGGCTGAACGGTGATTCATGAGCAA CATAAAGTGGGTGGTGAAATATCACCCCATGCAAGTAGTTACGGCCACCT CCCAGGTAGGCATCTCGCCGCGGGTTCGAGCTTAGAGGCCGCCCTTTCGA ACCTCCAAGTTGTTAGGGCTTGCGCTGTTGACGGGTCTCTCGCGACCTAA ATCCCCTCCTGGACGAGTATGGGGTAATCGAAAGAGGTTTTGGATTGCTT ATTCGTAAGCAGACTTGGTTCTTGTGCCTCGTAATATTACTTTGTACTTA GATTTCCTTTTGAAAACATCTATCTAATGCCTTAACTCCTTCTGGCGATA TATATTTCTCTTTCATCGTCGCCTGTGTCATTTGGATCTGTCTATTATTT CCCCTTCACTGGCAGAAGTATATCTCCCCTGTGCTTTTGGGCTGGTAATT TCTTGCTGTCTCTCGCTCTGCTTTAGCTATTAACATATCGAAATATAACT AATTGAGCAAGTTATTAGGTTCTGCGAAATGAAATTAGCCTTACATTATT ACCAATTTGTTATTAGAGTACAAGACAAGATATGGAGGGAAAAGTATGTT ATTTAATAATTTCACGTCTGTCCCCCTGCTCCTCCTCCGCTGGCGGTTCA CATTTTTAATCTACCTGCGACATCATTTCAAGGCGAGGACAATGAGTATC GTGGAACAGTACATCAAACAGGATGCCCCAGACCAGGTACTGGCATGTAC CTTTTTGTTCATTCCTATTTAAAGCTGGTCTTAAGCTAGGCGATGTGTGC TGAAAAGGCTGACTAGTGCTATGCACACCTTGCGCGATTTACTGGCTAGA AAGGAAGACGAACGAGCCTACAAACGGCGTATTAATCGTCGTAATCCCTT GTGGGTTTCCGCTCGTACACCGAGATCTATTAATATCCCCGCCTCCACAA CTTTCTTGAGTCGTGTTAATCTCGTAATAGAGATGAATACGGAGGAAAGG AGGAGGAGAGATATAAAGCCAAATATAGGAAAGGACAAGTCTTGCAGAGC TCCTCTACACCGTGCGTGGACCGGTCCTGCTTATAACTATATTCCCCAAC GTTTCATACCTCGTTAAATGCCGAACGCCACCTTCACCTATGGATTTTCC ACCGTGTATTGCTCTGTTTCTCGGTGATGAGCGTAGGTTAACATATCGGA AGACTGCAGGGAAAAGGTGTTGAGGACCGATGTGACCGCCTACGACATTT TTGATGACGCTAGGGCGGAGGTATTGGCCGTCATGGAAGTGAGCATGAAT ATGGTGACGGATCGTTGGTACTTAATTCTGATATTTATGATAATCACACC TTGTGTTTCGTTCATGAACATATTTCGTTTTGTGCTTTAGTATGGTCCCT TTTGGCGTTTTTGATGATAGCTTTACATTGTCGCCTGTTTATCATAGAAC TTGGAGCGCATGCCCTACTCGAAAAGACCTAGAGATATTTGAGCGTTGCC TTTTGAGACACCAATTTCATTTCCACGCACGATTTCACACCGCCCACCAG GATGTCATATGTTTGATTCAGCTTTATACCTCGCCTCTACTAAAATACGC GTCCTTGCTCCTCGCATTTGGTTCGTTGTATCACAACTATACAAATTTCC GAAGAGGGTTCGCGTTGACAGAAGGTTTCCGGCGTATCGTGAGCACCTCC GAAGAGGAGCAGCGCGAGATCCACCTATTGAGAGCCGAAGGCATGCTAGT TCCA
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Coding sequence (CDS) from alignment at H-elongata_contig5534:6795..11048-

>mRNA_H-elongata_contig5534.12950.1 ID=mRNA_H-elongata_contig5534.12950.1|Name=mRNA_H-elongata_contig5534.12950.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1860bp|location=Sequence derived from alignment at H-elongata_contig5534:6795..11048- (Himanthalia elongata Himel1 dioecious)
ATGTTCATATCCAGCGTAAGCCTCATTCCCGTGGTGTCTACATGGGCGAT
CTTCTCGACCAACGTGTTCGACGAGGTTGCCAACACATATCACCCTACGA
CAACTTCCTCCTACATTACTATATCAATGAACGTGTTGGAATTCCTTATC
ATCTGCTTCATATGATGTTCATATCCAGCGTAAGCCTCATTCCCGTGGTG
TCTACATGGGCGATCTTCTCGACCAACGTGTTCGACGAGGTTGCCAACAC
ATATCACCCTACGACAACTTCCTCCTACATTACTATATCAATGAACGTGT
TGGAATTCCTTATCATCTGCTTCATATGGTTTGTGTACGCCCGGCAGCTG
AAGTCCGTCCGCAGGCAGTTCAACGAATATAAGTCGTTGAAGCGGACACT
CCTGTTGATCACGCTGACGCTCATCAGCTACCCGATCGTTGTGATCTTCC
GTCTTCAGGACGACCTTCTTCTTCAACGGCGTATGACAATCTTATGTGAG
AATGACTCGGAAGGAAGAATGGTTAAAATGAAGAGTTTGTGTACGCCCGG
CAGCTGAAGTCCGTCCGCAGGCAGTTCAACGAATATAAGTCGTTGAAGCG
GACACTCCTGTTGATCACGCTGACGCTCATCAGCTACCCGATCGTTGTGA
TCTTCCGTCTTCAGGACGACCTTCTTCTTCAACGGCGTATGACAATCTTA
TGTGAGAATGACTCGGAAGGAAGAATGGTTAAAATGAAGAACCCGCTGAT
TACCACGCACATAATCCTCTGGGGTACCATCCAGAAGCCTTTTATAATAA
AACTCCTGGGCAATCGTGACTACCTGCTGACATTTACGAAAGGATTCTCG
GAGATGTCTTCCCCAGCTCAGACCCGCTGATTACCACGCACATAATCCTC
TGGGGTACCATCCAGAAGCCTTTTATAATAAAACTCCTGGGCAATCGTGA
CTACCTGCTGACATTTACGAAAGGATTCTCGGAGATGTCTTCCCCAGCTC
AGCTGAAGACCAGCCTCCAAGAGCAGCTCTCAGTTGAACAGCTCAGGATC
GAGTTCAGGCGCTATACCAAAAGCAAGGTTGCTCAAGAGCTCGTGGATTT
CTATATCAATCCACTCGATAGGGAGGAGATACAGAACATTTTTGAGCGTC
AGCTGAAGACCAGCCTCCAAGAGCAGCTCTCAGTTGAACAGCTCAGGATC
GAGTTCAGGCGCTATACCAAAAGCAAGGTTGCTCAAGAGCTCGTGGATTT
CTATATCAATCCACTCGATAGGGAGGAGATACAGAACATTTTTGAGCGTC
AGGCGAGGACAATGAGTATCGTGGAACAGTACATCAAACAGGATGCCCCA
GACCAGGCGAGGACAATGAGTATCGTGGAACAGTACATCAAACAGGATGC
CCCAGACCAGGTTAACATATCGGAAGACTGCAGGGAAAAGGTGTTGAGGA
CCGATGTGACCGCCTACGACATTTTTGATGACGCTAGGGCGGAGGTATTG
GCCGTCATGGAAGTGAGCATGAATATGGTGACGGATCGTTAACATATCGG
AAGACTGCAGGGAAAAGGTGTTGAGGACCGATGTGACCGCCTACGACATT
TTTGATGACGCTAGGGCGGAGGTATTGGCCGTCATGGAAGTGAGCATGAA
TATGGTGACGGATCGGTTCGCGTTGACAGAAGGTTTCCGGCGTATCGTGA
GCACCTCCGAAGAGGAGCAGCGCGAGATCCACCTATTGAGAGCCGAAGGC
ATGCTAGTTCCAGGTTCGCGTTGACAGAAGGTTTCCGGCGTATCGTGAGC
ACCTCCGAAGAGGAGCAGCGCGAGATCCACCTATTGAGAGCCGAAGGCAT
GCTAGTTCCA
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