mRNA_H-elongata_contig5523.12931.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig5523.12931.1
Unique NamemRNA_H-elongata_contig5523.12931.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig5523.12931.1 vs. uniprot
Match: A0A6H5L6E2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6E2_9PHAE)

HSP 1 Score: 287 bits (734), Expect = 2.540e-87
Identity = 146/314 (46.50%), Postives = 200/314 (63.69%), Query Frame = 2 
Query:   14 EGFLIQPIDIPFIQNEGDWERPGHGISMRSLGEPKSGTTWAERVITELALQLCGSSTNTWCKMGGLEIFPDRPDPSYQWEMLH--ADTGQLFMHFDGRIKHIIPGL--EVGEGCNPHGRQHINRFGTKSPCTKFNADIDVTRASLMQCMPDTSERCAAHMPSQDPAVRRTAIVFRDPREIVVSEHRMRIEVYHAT---KKTGPLVPFIYRRFEAIVSWQLIRWIWHT-TFYNNASHVMFYEDLQASPKVVADLAAFMGLDCSKEQALNVLETHKNQSPHGGFDTNNIPIETIEYMNATMTKILPEGILARYGLS 931
            E   IQPIDIPF+Q  G W+ PG+GISM + GEPKSGTTW  R++ +LAL LCG++ N+WC MGGL +  + P P Y +EM++  A  G LF+HFDG  KH IPG+  E   GC+  GR H N FG   PC   + +   TR  L  C+ +TS  C  +M S DP VRR+ ++ RDPR++ +SE  MRI+ Y      +KT P V F  +RFE +VSW   R++WHT T    +SHV+FYEDL+        +A FMGL CS+E AL V   H+N +PHG + T+ + +ETI++MN TM ++LP  +  R+G++
Sbjct:  136 EKSSIQPIDIPFLQEPGGWQLPGNGISMDATGEPKSGTTWLGRLVPDLALHLCGNANNSWCGMGGLAVLDNLPAPKYVFEMVNKTAGEGALFLHFDGNGKHYIPGMKGEPHPGCDNGGRPHENYFGDTPPC--LDEEETPTRERLRACLFNTSALCVQYMASVDPDVRRSMVIIRDPRDVAMSEREMRIKYYREPAWIRKTTPDV-FARKRFEILVSWTHQRYLWHTETVMAPSSHVVFYEDLKDHHHGFIGMADFMGLACSEEDALEVWRAHRNPAPHGDYSTHGLQLETIQWMNETMARLLPPSLAFRWGVT 446
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BLAST of mRNA_H-elongata_contig5523.12931.1 vs. uniprot
Match: A0A6H5L183_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L183_9PHAE)

HSP 1 Score: 278 bits (710), Expect = 1.990e-84
Identity = 139/316 (43.99%), Postives = 203/316 (64.24%), Query Frame = 2 
Query:   11 DEGFLIQPIDIPFIQNEGDWERPGHGISMRSLGEPKSGTTWAERVITELALQLCGSSTNTWCKMGGLEIFPDRPDPSYQWEMLHADTG----QLFMHFDGRIKHIIPGLEVGEG--CNPHGRQHINRFGTKSPCTKFNADIDVTRASLMQCMPDTSERCAAHMPSQDPAVRRTAIVFRDPREIVVSEHRMRIEVYHATKKTGPLV--PFIYRRFEAIVSWQLIRWIWHT-TFYNNASHVMFYEDLQASPKVVADLAAFMGLDCSKEQALNVLETHKNQSPHGGFDTNNIPIETIEYMNATMTKILPEGILARYGLS 931
            +E   I+P+ IPF Q   ++   GHG+S+ +LGEPKSGTTW  R++  LA++LCGS  N WC++GG+E+FP  P PSY++E+L+  T     +LF+HF GRIKHIIPG+++G    C   GR H   F    PC    +    TR  L  C+ +T++RC  +M S DPAVRR+ ++FRDPR++V+SE++MR +V+H       L    F+  +FE +VSW   R++WHT      +SHV FY++LQ SP     +A  MGL+CS++QA  V + HK  SP+GGF T  +   TI++MNATM ++LP  +  ++GL+
Sbjct:   85 EEADSIKPVAIPFKQKPDEFGERGHGLSLVALGEPKSGTTWLGRMVPSLAIELCGSENNPWCQLGGVEVFPHPPAPSYEFELLNISTPTGRPRLFLHFQGRIKHIIPGMDLGIPLKCRNGGRLHKEGFMDLQPCDSGESP---TRERLESCLWNTTKRCVNYMTSTDPAVRRSIVLFRDPRDVVISEYKMRTQVFHRDPWIASLSLEEFVQFKFEVLVSWLHQRYMWHTGDLMGPSSHVEFYDELQKSPVGFVGIARLMGLECSEDQAYKVWKAHKQASPNGGFATR-LGEATIQFMNATMARLLPPSVAIQWGLT 396
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BLAST of mRNA_H-elongata_contig5523.12931.1 vs. uniprot
Match: A0A6H5JLX3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JLX3_9PHAE)

HSP 1 Score: 242 bits (618), Expect = 3.880e-72
Identity = 131/301 (43.52%), Postives = 179/301 (59.47%), Query Frame = 2 
Query:  146 ITELALQLCGSSTNTWCKMGGLEIFPDRPDPSYQWEMLHADTGQ-----LFMHFDGRIKHIIPGLEVG---EGCNPHGRQHINRFGTKSPCTKFNADIDVTRASLMQCMPDTSERCAAHMPSQDPAVRRTAIVFRDPREIVVSEHRMRIEVYHATKKTGPLVP-FIYRRFEAIVSWQLIRWIWHT-TFYNNASHVMFYEDLQ-----------------------------ASPKVVADLAAFMGLDCSKEQALNVLETHKNQSPHGGFDTNNIPIETIEYMNATMTKILPEGILARYGLS 931
            + +LAL+LCGSSTNTWC+MGGL ++P  P P Y++E+L   TG+     LF+H+ G  KH+IPG+      EGCN  GR+H N F    PC    A    TR  L  C+ +TS RC   +PS+    RRTA++ RDPR++V+SE RMR + YH  +     V  FI+ RF+ IVSW   RW+WHT T  + +SHVMFY+DLQ                             A+P  + DLAAFMGL+CS++QA NV E+H+N  PHG + T+ + + TIE+MNATM  +LP  +   +GL+
Sbjct:    1 MPQLALELCGSSTNTWCEMGGLAVYPSEPSPWYEFELLKRGTGEGSGPTLFLHYKGSNKHVIPGMSWKGHPEGCNQGGRRHRNFFEDYPPCISGPAS---TREQLTGCLWNTSSRCMGFVPSES---RRTAVMLRDPRDVVLSEFRMRRDYYHQEEVMAISVDDFIWDRFQTIVSWTHQRWVWHTETVLSESSHVMFYDDLQIFSACCCISNLSAPVRGARRLFYTQSSLKANPMGMIDLAAFMGLECSEDQARNVWESHQNAIPHGDYTTHGLQLGTIEWMNATMASLLPTAVSLHWGLT 295
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BLAST of mRNA_H-elongata_contig5523.12931.1 vs. uniprot
Match: A0A6H5JZR3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZR3_9PHAE)

HSP 1 Score: 229 bits (585), Expect = 2.800e-67
Identity = 119/281 (42.35%), Postives = 172/281 (61.21%), Query Frame = 2 
Query:  119 SGTTWAERVITELALQLCGSSTNTWCKMGGLEIFPDRPDPSYQWEMLHADTG-----QLFMHFDGRIKHIIPGLEVGE--GCNPHGRQHINRFGTKSPCTKFNADIDVTRASLMQCMPDTSERCAAHMPSQDPAVRRTAIVFRDPREIVVSEHRMRIEVYHATK--KTGPLVPFIYRRFEAIVSWQLIRWIWHT-TFYNNASHVMFYEDLQASPKVVADLAAFMGLDCSKEQALNVLETHKNQSPHGGFDTNNIPIETIEYMNATMTKILPEGILARYGLS 931
            SGTTW  RV+  LAL+LCGS  N WC++GG+ I P  P   +++E+L  + G     +LF+HF G  KHIIPG+++G    C   GR H + F    PC    +D   TR  L+ C+ DTS  C  HMPS DPAVRR+ ++ RDPR +V+SE+ MR +V    +  +T  L  FI  +FE +VSW   R++WHT T    +SH+  YE+LQ S   + D+A FMGL CS++QA  V    ++ SP GG+ +  + +ET+ +MNATM ++LP  +  R+ ++
Sbjct:   17 SGTTWLGRVVPALALELCGSFNNQWCQVGGMTIIPHPPASLHEFELLKRNIGGSGSPELFLHFKGIHKHIIPGMDLGVPVSCRNGGRLHRDYFLDLQPCA---SDEMPTRDRLVSCLYDTSASCVRHMPSADPAVRRSIVIMRDPRNVVISEYMMRTQVIERERWTRTFSLDEFIMWKFEVLVSWIHQRYMWHTGTLMGPSSHITVYEELQRSHLGLIDIAGFMGLQCSEQQAAKVWIGRRHPSPSGGYASRGLSVETVSFMNATMARLLPPALALRWDVT 294
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BLAST of mRNA_H-elongata_contig5523.12931.1 vs. uniprot
Match: D8LSW1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSW1_ECTSI)

HSP 1 Score: 143 bits (360), Expect = 1.660e-36
Identity = 72/161 (44.72%), Postives = 100/161 (62.11%), Query Frame = 2 
Query:   50 IQNEGDWERPGHGISMRSLGEPKSGTTWAERVITELALQLCGSSTNTWCKMGGLEIFPDRPDPSYQWEMLHAD-----TGQLFMHFDGRIKHIIPGLEVGE--GCNPHGRQHINRFGTKSPCTKFNADIDVTRASLMQCMPDTSERCAAHMPSQDPAVRRT 511
            +Q+   + +PG GIS+ +LGEPKSGTTW  RV+  LAL+LCGS  N WC++GG+ I P  P   +++E+L  +     + +LF+HF G  KH+IPG+++G    C   GR H + F    PC    +D   TR  L+ C+ DTS  C  HMPS DPAVRR+
Sbjct:    1 MQDPDGFGKPGQGISLDALGEPKSGTTWLGRVVPALALELCGSFNNQWCQVGGMTIIPHPPASLHEFELLKRNIDGSGSPELFLHFKGIHKHVIPGMDLGVPVSCRNGGRLHRDYFLDLQPCA---SDEMPTRDRLVSCLYDTSPSCVRHMPSADPAVRRS 158
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5523.12931.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5L6E2_9PHAE2.540e-8746.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L183_9PHAE1.990e-8443.99Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JLX3_9PHAE3.880e-7243.52Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JZR3_9PHAE2.800e-6742.35Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
D8LSW1_ECTSI1.660e-3644.72Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig5523contigH-elongata_contig5523:4485..11244 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons7
Model size1740
Cds size852
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930900.2935934-UTR-H-elongata_contig5523:4484..45461622930900.2935934-UTR-H-elongata_contig5523:4484..4546Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig5523 4485..4546 +
1691679617.2323568-UTR-H-elongata_contig5523:4484..45461691679617.2323568-UTR-H-elongata_contig5523:4484..4546Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig5523 4485..4546 +
1622930900.336914-UTR-H-elongata_contig5523:4730..47621622930900.336914-UTR-H-elongata_contig5523:4730..4762Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig5523 4731..4762 +
1691679617.2436833-UTR-H-elongata_contig5523:4730..47621691679617.2436833-UTR-H-elongata_contig5523:4730..4762Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig5523 4731..4762 +
1622930900.5195775-UTR-H-elongata_contig5523:10450..112441622930900.5195775-UTR-H-elongata_contig5523:10450..11244Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig5523 10451..11244 +
1691679617.312241-UTR-H-elongata_contig5523:10450..112441691679617.312241-UTR-H-elongata_contig5523:10450..11244Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig5523 10451..11244 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930900.377798-CDS-H-elongata_contig5523:4762..48601622930900.377798-CDS-H-elongata_contig5523:4762..4860Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5523 4763..4860 +
1691679617.2524118-CDS-H-elongata_contig5523:4762..48601691679617.2524118-CDS-H-elongata_contig5523:4762..4860Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5523 4763..4860 +
1622930900.3973763-CDS-H-elongata_contig5523:8103..82061622930900.3973763-CDS-H-elongata_contig5523:8103..8206Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5523 8104..8206 +
1691679617.268843-CDS-H-elongata_contig5523:8103..82061691679617.268843-CDS-H-elongata_contig5523:8103..8206Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5523 8104..8206 +
1622930900.4183412-CDS-H-elongata_contig5523:8789..90011622930900.4183412-CDS-H-elongata_contig5523:8789..9001Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5523 8790..9001 +
1691679617.277486-CDS-H-elongata_contig5523:8789..90011691679617.277486-CDS-H-elongata_contig5523:8789..9001Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5523 8790..9001 +
1622930900.4490519-CDS-H-elongata_contig5523:9274..93981622930900.4490519-CDS-H-elongata_contig5523:9274..9398Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5523 9275..9398 +
1691679617.2856326-CDS-H-elongata_contig5523:9274..93981691679617.2856326-CDS-H-elongata_contig5523:9274..9398Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5523 9275..9398 +
1622930900.473609-CDS-H-elongata_contig5523:9657..97471622930900.473609-CDS-H-elongata_contig5523:9657..9747Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5523 9658..9747 +
1691679617.2941384-CDS-H-elongata_contig5523:9657..97471691679617.2941384-CDS-H-elongata_contig5523:9657..9747Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5523 9658..9747 +
1622930900.4960558-CDS-H-elongata_contig5523:10225..104501622930900.4960558-CDS-H-elongata_contig5523:10225..10450Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5523 10226..10450 +
1691679617.3027418-CDS-H-elongata_contig5523:10225..104501691679617.3027418-CDS-H-elongata_contig5523:10225..10450Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5523 10226..10450 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig5523.12931.1prot_H-elongata_contig5523.12931.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig5523 4763..10450 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig5523.12931.1

>prot_H-elongata_contig5523.12931.1 ID=prot_H-elongata_contig5523.12931.1|Name=mRNA_H-elongata_contig5523.12931.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=284bp
MRSLGEPKSGTTWAERVITELALQLCGSSTNTWCKMGGLEIFPDRPDPSY
QWEMLHADTGQLFMHFDGRIKHIIPGLEVGEGCNPHGRQHINRFGTKSPC
TKFNADIDVTRASLMQCMPDTSERCAAHMPSQDPAVRRTAIVFRDPREIV
VSEHRMRIEVYHATKKTGPLVPFIYRRFEAIVSWQLIRWIWHTTFYNNAS
HVMFYEDLQASPKVVADLAAFMGLDCSKEQALNVLETHKNQSPHGGFDTN
NIPIETIEYMNATMTKILPEGILARYGLSLVSH*
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mRNA from alignment at H-elongata_contig5523:4485..11244+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig5523.12931.1 ID=mRNA_H-elongata_contig5523.12931.1|Name=mRNA_H-elongata_contig5523.12931.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=6760bp|location=Sequence derived from alignment at H-elongata_contig5523:4485..11244+ (Himanthalia elongata Himel1 dioecious)
GTCCCCGGATGACGAAGGTTTCCTGATACAGCCCATCGACATCCCATTCA
TACAAAATGAAGGTGGGCGAGTTGGCAGAGTCGCATCTGAGCGCAATGGA
GGCGCACTATCCCATGCAATGCGCTTGGCCAGCGCTATATTTTCTCCAGT
CCAGATTCATTTCAACCGCCACCACCAGACTAACCCACTGTACCTATTAT
CGGGCATGAAAATAACCCATTGTACTCGTTATGGGTCATTAAACAGGAGA
TTGGGAGCGTCCGGGTCACGGAATATCGATGAGGTCACTTGGGGAGCCGA
AGTCTGGCACCACATGGGCCGAGAGGGTTATCACTGAACTTGCCCTCCAG
CTTTGTGGCAGCTCAACGAACACTTGGTGAGAGAGATTATGCTCGATCCA
TCGTTACGGGTAGTTTCATGCCTGGAAGGGAGAGTATAGCTTGGCCAGTC
AGTGTTTGTCAGGAGCACTTTCAAGCCACGGTTGACGATGATCAGAAATG
GCGTGAAACTGGAGCAAGGTTGGGATTTGTAGAGGCGAACCTTATACCAA
TGCCTCATTATATTTCATCAGCCCCCTACAAGCGCATTTGTAGCATATCG
CTACCGCTTTAACCTCTTATTATTCGAACACAAAAACGTAACCTGTCACT
ACACCCACCCCCCCTTTAATTATACCCCTTTAATTATGCCCCCTCGTATT
TACCGCCTATTCTGTATGCTCTGGGTTTTTTTACGTCCGCACATGATTAT
GAAGGTAAGTGTACACTGTTTCGCACATGTCCACCGAACCAATAGTGGGT
TTGAGAAAACAGAGGGGCACAATAATTGATCGATGGGGCTACCTGAATAG
GCTTTACCCTTGATTTAAGCTATATTGAGTACTGCTGGCTAAGTGTTGGC
GGACTCTCGGTGGTAAACCCCATTGGTACGCAATTGCTTGACCTGATGAA
ATAGGGATTGACCCGATGGCGCTTGACGGTAGAGATGGGCACAGTCGCGG
AAAGCGAGAGAACTGAGAGTATCCCGGGAGTACGCACCAAAATGGAGATG
TCCCCGTTCGCGTCTGAGAATTTGGCCTCGCGAGACAGGTTCGACAGTCC
CATCTCGTGTCAGCCTGCTCATTTTCTTAACCCAGACTGAATATGTTGGG
TACCCCCGGGATCCTCTAGCTTTCCGTGATGGCGTCCAACGCTACCGTCA
ACCGCCATCGGGCTAATCTCGATTTCATCAGGTCATCACGCAATTGCGTA
CCGTTTACCACCGAGAGTCCGCCGACATTGAGCCAGCAGTCCTCGATGTA
GCTTGAGTAACGGGTGCAGCCTATTCAGGTAGCCCCATGGGCCAGTTATT
GTGTGCCTCTGTTTGTTTTCTCACTATTGGTAGAGTGAATATGTGCGATA
CAGCAAAAGACAGTATCGGAGGCGTGATGCCCGATGAGATTTTCATTGGG
TAACATAATTAACCACATTTGACGATTTTGTTATCATAGGTAGTAATGTG
CACACTCGAACTTGACGATAGCTGGACCGCTGGATTTCACCTCTCATGAT
ATAAAGACGGCGTGGGTATTCTGTGCGTTTGAGTGGATCTTTATGTATTG
TAAGGTAAATATCACAACGACTATAAACTCAACGAAGGTTAGGCACGCCA
TCGCGATTGTCACTGCAATTTTTGAGATAATGTCGAACCCCGCGCCCTTA
CCATTATCGCGCAAATTGTTGTGCCCAAGCGTCATGTCAATCGTCATGAT
AATCACTGTCACCATAAAGTTTTGAATATTCGACTATGTTCTCAAAGGCA
GCTATAATAGCTGGGGCTGGTAGCCGTGAGACTGGCCGAGCAAGACCGAT
TTGTCAAGGATTTAAGCACTCGGAAATAGTTGAAAGGTGTCCCTTTAGGG
CAAGGAAGGATTGATAACAGCGCGCGTTTGAGTTCGAGTGGAAGCGATCG
AGTGGTTGACAGAGAGAGAGGTGCGAGTGGGTAAAGACACTTAATCGAAA
CATCTTGCAAAACACCCCGTAAACTCCCGCCCGCCACTAGACTATCTCCA
GCTATCTCCGTTTCCAATCGGCACAAGTTACTCCGCTGTTTTGTAGTAAC
GAACATTCTTACTTCCAACGATATGTTGATCACACATTTAGCAGAAGATC
AACCGGACTTGGTTGCCTTCTGCTCGTGGTCAGCTGAACAGGGAAAATCA
TTTTCCCCTGTCCCCGTTCGCGCCTGAGAATTTGGTCTCGCGTGACGGTT
TCAGCCCTCCCTTCCCCTACACTTCCAACGATATTATGCGCCCTGTTGCG
ATATGCCACTAAGATTTGCCTTGTTGGGTTACACAACGCATATTCCTAAC
AGAATTTGATCGCCTGATCATAAGGTGTTTTTATATTCTTCACCCGCCAT
GACAATTGCCATGTATTCTTGAAAGGTCTGAAGGAGTGCAGACCTGTCAT
GCCAATTTTTCTTAAAAGACTCTCTCACTCAAACCCTGTACGATAGGTGT
CAAACCCCGTCATGTTTCTGCTGAAGTACAACTGATCATACTTCGTTTTT
TTATTGTTGAGATTTTGGCGAAACTTCCCATTATTCGCTACTTTATTCCG
CATATAATTCACTGCCTCACTTGCGTATGACTCGGCTGCTGATTACTGGT
TATGGTAGTGCCTCCCGCATCATGTTTCCCAACACATTACATATTTCAAA
CTTATAAAAGAGAAAATCCCTAAATGTGATACATGAATGAAAGTGCAAGT
TCCGAAATACCGCTATCGCTATAGGAGTTTTCGCAGGTTGTAGGAGTAAG
GCTCGATAAGCCTGCTACTTCTACCTCAACGTCGATCATGATACAATACG
TTCGACTTTAGGAGGTTAGGCACTACTTTTGGGGGGTTCTGGGGGGTCGG
ATAATGCTGTCGGGCGAGCTTAATAGCGTGTGCTGTATACAACAATTTAA
CCAGAATCAGCAGTGATCCTTGCAGCACGATAAAGCTTATTTGGCTCGAT
CTAATTATTGAATGCCGTACCTCTGAAAACAAGCAATCGACCTGGTCACG
TTTTGTCCACGAACGATGGATGAAGCTCCCTTGGAACTCACACGAAAAAC
TACGGAAAGTAAACCGCCTGGAATTAGATGGCATCGTGGGAGGACTCATG
AGGCTGCTCACATACAACTGCTTATTTTTTGCAAAGCATGTCTGCCATGA
CACCTGTTAGGTTACCTGGGATGAATGGTCTCAAATTACTTAGGGTATCT
AAACCACACTTCATGCTGAAGGTTGCACGCCAACCATTTGCAAAATGAGT
TGCGCCTAAGGGAAGCAAACATTTCCTACCCGATTTAGCGGTTTACGGTA
GAGAGCGAGTAGAAGGCCGCGGTTGTCCGTGGTATCCTGAGGCAAAGACG
CCAAGTCCATTTCCTTGTGGTGGGCGTCCCCACAACCCTCCAGATGAGTA
CAAACGGTGAAGGGGAAGTTGCTATTGCACTTTCTTCAACTTCACTCAGT
CGGATACTTTGATGCTGTTCAAACAAAGCCGTCAACAGTCGATGAAATGG
TCTGTGCGCTCCAAGTCTCCCTCATATCATGCGACTAACGATTCTCCTGC
TCTCGCGCGGTATTAACAGGTGCAAAATGGGTGGGCTCGAGATTTTCCCA
GATAGGCCCGATCCTTCGTACCAATGGGAGATGCTCCATGCGGATACGGG
ACAGCTGTTCATGCATTTCGATGTGAGTAGCGGACACGGTCCCGCGGCAT
ACTGCCACGTTACACGGCTGATGGACGGTAAACCGACGATCGGGGTGCGG
CCTCACAGTAAGTGTATTAGATGCCTTAACATTTTACTAGAGCTGCACTA
TTTGCGCAGGTATCATTTAGATAAGATATTACAGCTTGTTCGCTTGTTCC
AACGAAAGTTCAAGGTTTTTAAAATAAAAATGAAAAATATATGCGACCAG
TGAGCGCTGCCTAGCTTGGCCCAATTATTGTGGCTAAGCGGTTATGGCTT
GCTCGCTTTACCCCTCATGGTGTAAAGAAAGTGTCAATGTTCGAAAGGTT
TGAATGAGTTCATAAGTTATTTAAAAACACTATACGCCACAAGTTTGTGC
TGATTGGTTAGGCCCCGTGTTCAGTGGTTCTAACTCGTTCCAACATTGAA
TGAGGAATATACTTTCAACTTCGACCCATGAGTCCAATGCTTTTGATGCC
CATGTTCGTGTGTTGGTTCCTTACAAACCGTAGTAAAGCGTTGTCCCCTC
AAAGAGTATAAAGCAAGCTCGTTCGTCCACACCATACAATATCTTTCGCC
GTCAGGGGAGAATCAAGCACATCATACCTGGACTTGAAGTTGGTGAAGGG
TGTAATCCCCATGGGAGGCAGCATATCAACAGATTCGGGACGAAATCACC
GTGTACAAAGTTCAATGCGGACATCGACGTCACACGAGCATCTCTCATGC
AATGCATGCCAGACACTTCTGAGCGTTGTGCAGCCCACATGCCTTCTCAA
GACCCAGCCGTTCGACGGTGAGGAACCTCTACAAAAGCGTTTGCGTCGAT
TTGTGTGTCGCCCACAGATTGAATCTCAGGAGCGCGTCTCCCGTCCCAAT
GACAGGGTGGTGGCCGAAGAACAAAGCGTTTGAGAGTATTTGGTCCACCA
ACGGCGTGTGACAGACATCCTGCGCCACCTACGTCACGTGGCGGGAGACA
TTACAACAAGTTTACATAGTTGTTTAACTGCACTTACGACCCCTGCCCTT
CGATTTTATTTGCCGTACAACGCTCTTTTTCTCTCCTCAGGACCGCCATA
GTGTTCAGGGATCCAAGAGAAATTGTCGTATCTGAACACAGAATGAGGAT
CGAGGTGTACCACGCGACGAAAAAGACTGGCCCGCTCGTCCCTTTCATCT
ATCGACGATTCGAGGTGCATCTCGGACTGGAGACGGTCACAAAGCTATCT
ATTCAATCTGCCAGTCCTTGCGTCACTACTCACATGCTCGCAGCACATGA
TACTGTGTCGTCGCGATCGCACGATAAACCTCGTCATCAGACCTTACCTC
CCTTGTTTACGAGTCTAGGGTCTTAAATCATGCCAAGCCGGGGTTCTGAA
ATACATTGCCGCCATCTCCCCGATAATTTGACCATGTCATTTGTTGCGCT
GCCACTACGCTTCGCAAACACAGGCAATCGTGAGTTGGCAGCTAATACGA
TGGATATGGCACACTACATTCTACAACAACGCGTCACACGTGATGTTTTA
TGAAGACCTCCAGGTAATTGAACACCGCTGCGATCGAGGAATTGGCTACT
CCACCAATTCGTTGCTCCCGCAACTCTATGCAATCCGTTAGCTCTAGATT
GACTTACCACCAAGTATTCTTCTAGCGGAAACGCCAGGGTTGTAGACGAC
TCCATGCTGATAATCAGTTTCAGTGACATCTAGACGATAAGGGCGGCTCC
ACTTAATGCTTAGGTTCACCTCGCCGACATTTTCCTAGTTCAATTGATTT
ATGTCTACCAATATCGGCTCTGGTGTCATTTCGATAATTCGTGTCTATAT
ATCAGCCAATGAAATATTATCCCCGGCGCTCGGAAGCACTGTTGCTTCCC
AAGTAAAACGCTGACACGATGTTGGCCACAAAACCTCCTATTAATAGGCG
AATTTACTTGAAAAAAAAATCACATCCCCCCGTTACTGGCTCATAGAACA
AGCTTTGATCCGGTGTTTTTCCTGATGTGATTTCTTCGCAGGCGAGTCCA
AAGGTTGTGGCGGACTTGGCTGCTTTCATGGGACTTGACTGCTCTAAGGA
ACAAGCGCTGAATGTGTTGGAAACGCATAAAAATCAGTCTCCACATGGTG
GCTTTGACACAAACAATATCCCTATAGAAACGATTGAATATATGAACGCC
ACAATGACCAAGATCTTGCCCGAGGGAATACTGGCTCGTTACGGGCTTTC
CTTGGTTTCTCACTAATGGGTGCTTCTATTGCGCGGAACGTAACCTGGCG
GTGGGGTGCGATGGATGTGGCTTTGACCACATCGCAAGCGACGTCACCGA
GAGGATAATCGTACTTGACGGTGAATCAATCCAGTTGTTGGCTTTTCTTG
GGCTAGTTTCAATTGCAAGGAAATTCTGCAGATGGATCATGGAACACGCG
CGTTAGGGTGTCGATTTTGTGGTTTTAGCCGATCTAAACGAGCCACATAA
GCCTGAGCGTTGCGCTCTCTTTTTTGTATACATTACCACTAGATTTTGTG
CTATATGTACTTAGTCCCCTCAGGTCCGGTTAAAGAATCGTGCGCGATTC
TGAGAACAGGAAGATGACATCGAACCCACTTTAAAACCCTCGAGACACTA
AGGAAGGCAAGGGTGGAGGGGAGGTAGGTATATTATGATCATCTCCTCAA
AGAAGGCAAAACAGGTCTGTACCCTGACTGTGATTTTTCTGTCGCAAAAG
ACACGGAAGGGCGGGGCGAGGACGTGCGCGGGAGTGATATTAAGTACCCT
TTAAACTGCTATCGAGTTGGTTTGATGTCGACCGAGGCCCGTGTTGTTGA
AAATTAGGGTGCGTTCTTGGGAGGGGTAAATAATCGTCGACCGAGCTTCG
TTTCCGTCACAGGTATTGGTTAGCATGATAGTTATGAGATTGAGAAGAAA
AACGTTTTTTCGCGTACAACAGAGATACTGTACCGTTATCACATATAGCA
AAGTAAAGATCAACCGGATTTGGTGTGCTTCTGTTTGTGGTCAGCTGAAC
AAGGAAACGG
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Coding sequence (CDS) from alignment at H-elongata_contig5523:4485..11244+

>mRNA_H-elongata_contig5523.12931.1 ID=mRNA_H-elongata_contig5523.12931.1|Name=mRNA_H-elongata_contig5523.12931.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1704bp|location=Sequence derived from alignment at H-elongata_contig5523:4485..11244+ (Himanthalia elongata Himel1 dioecious)
ATGAGGTCACTTGGGGAGCCGAAGTCTGGCACCACATGGGCCGAGAGGGT
TATCACTGAACTTGCCCTCCAGCTTTGTGGCAGCTCAACGAACACTTGAT
GAGGTCACTTGGGGAGCCGAAGTCTGGCACCACATGGGCCGAGAGGGTTA
TCACTGAACTTGCCCTCCAGCTTTGTGGCAGCTCAACGAACACTTGGTGC
AAAATGGGTGGGCTCGAGATTTTCCCAGATAGGCCCGATCCTTCGTACCA
ATGGGAGATGCTCCATGCGGATACGGGACAGCTGTTCATGCATTTCGATG
TGCAAAATGGGTGGGCTCGAGATTTTCCCAGATAGGCCCGATCCTTCGTA
CCAATGGGAGATGCTCCATGCGGATACGGGACAGCTGTTCATGCATTTCG
ATGGGAGAATCAAGCACATCATACCTGGACTTGAAGTTGGTGAAGGGTGT
AATCCCCATGGGAGGCAGCATATCAACAGATTCGGGACGAAATCACCGTG
TACAAAGTTCAATGCGGACATCGACGTCACACGAGCATCTCTCATGCAAT
GCATGCCAGACACTTCTGAGCGTTGTGCAGCCCACATGCCTTCTCAAGAC
CCAGCCGTTCGACGGGGAGAATCAAGCACATCATACCTGGACTTGAAGTT
GGTGAAGGGTGTAATCCCCATGGGAGGCAGCATATCAACAGATTCGGGAC
GAAATCACCGTGTACAAAGTTCAATGCGGACATCGACGTCACACGAGCAT
CTCTCATGCAATGCATGCCAGACACTTCTGAGCGTTGTGCAGCCCACATG
CCTTCTCAAGACCCAGCCGTTCGACGGACCGCCATAGTGTTCAGGGATCC
AAGAGAAATTGTCGTATCTGAACACAGAATGAGGATCGAGGTGTACCACG
CGACGAAAAAGACTGGCCCGCTCGTCCCTTTCATCTATCGACGATTCGAG
GACCGCCATAGTGTTCAGGGATCCAAGAGAAATTGTCGTATCTGAACACA
GAATGAGGATCGAGGTGTACCACGCGACGAAAAAGACTGGCCCGCTCGTC
CCTTTCATCTATCGACGATTCGAGGCAATCGTGAGTTGGCAGCTAATACG
ATGGATATGGCACACTACATTCTACAACAACGCGTCACACGTGATGTTTT
ATGAAGACCTCCAGGCAATCGTGAGTTGGCAGCTAATACGATGGATATGG
CACACTACATTCTACAACAACGCGTCACACGTGATGTTTTATGAAGACCT
CCAGGCGAGTCCAAAGGTTGTGGCGGACTTGGCTGCTTTCATGGGACTTG
ACTGCTCTAAGGAACAAGCGCTGAATGTGTTGGAAACGCATAAAAATCAG
TCTCCACATGGTGGCTTTGACACAAACAATATCCCTATAGAAACGATTGA
ATATATGAACGCCACAATGACCAAGATCTTGCCCGAGGGAATACTGGCTC
GTTACGGGCTTTCCTTGGTTTCTCACTAAGCGAGTCCAAAGGTTGTGGCG
GACTTGGCTGCTTTCATGGGACTTGACTGCTCTAAGGAACAAGCGCTGAA
TGTGTTGGAAACGCATAAAAATCAGTCTCCACATGGTGGCTTTGACACAA
ACAATATCCCTATAGAAACGATTGAATATATGAACGCCACAATGACCAAG
ATCTTGCCCGAGGGAATACTGGCTCGTTACGGGCTTTCCTTGGTTTCTCA
CTAA
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