mRNA_H-elongata_contig55207.12929.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig55207.12929.1 vs. uniprot
Match: D8LFH2_ECTSI (Putative 8-amino-7-oxononanoate synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFH2_ECTSI) HSP 1 Score: 384 bits (985), Expect = 1.000e-129 Identity = 204/292 (69.86%), Postives = 237/292 (81.16%), Query Frame = 1
Query: 1 IQMGCKLGRQRHTVFFHHNDIEHLDAVLRDLRA-AEATSRSNLFVAVESVYSMDGDLAPLREILGVADAHMASVIVDEAHGTGVFGEEGRGLVSALGLESHPALLAGMHSFGKALGVHGAVVVGSATLRKFLVNYARPLIYSTSLSLHSLACIRCSYLMQAKADDCRGRIFELSDMFQSMLAD---EKTLDGTFP---LKARDVPRARSPIQSVVIAGNEQSLFVADSLRALGFDIRAIRMPTVPEGTERLRVTLHAYNTNDEVAALAHHIRRLAA-KGNDTHVSENSTAED 852
++MGC+LGRQ+ TV F HND +HL+ L LR+ ++ +N+FVAVESVYSMDGDLAPLREILGVA AH A VIVDEAHGTGVFGE+GRGLVSAL LE+HPALLAGMHSFGKA G HGAVVVGSATL+ FLVNYARPLIYSTSL L SLACIRC+YLMQA ADD R R+ +L+D FQS+L+D + GT P L A+D+PR RSPIQSV+IAGNE+ L VADSLRALGFD+RAIR PTV EGTERLR+TLHAYNT++EV +LA HIRRL A KGN + T+E+
Sbjct: 21 VRMGCRLGRQKETVLFRHNDFQHLETTLEGLRSRGPGSAPANIFVAVESVYSMDGDLAPLREILGVAAAHGALVIVDEAHGTGVFGEQGRGLVSALNLEAHPALLAGMHSFGKAFGAHGAVVVGSATLKDFLVNYARPLIYSTSLPLDSLACIRCAYLMQASADDRRKRVLDLADAFQSLLSDADVNRWAGGTAPPPPLDAKDIPRHRSPIQSVLIAGNERCLLVADSLRALGFDVRAIRKPTVAEGTERLRITLHAYNTDEEVESLARHIRRLTANKGNSADKARARTSEE 312
BLAST of mRNA_H-elongata_contig55207.12929.1 vs. uniprot
Match: A0A6H5KGC3_9PHAE (Aminotran_1_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGC3_9PHAE) HSP 1 Score: 387 bits (994), Expect = 8.030e-129 Identity = 208/298 (69.80%), Postives = 242/298 (81.21%), Query Frame = 1
Query: 1 IQMGCKLGRQRHTVFFHHNDIEHLDAVLRDLRAAEATSR-SNLFVAVESVYSMDGDLAPLREILGVADAHMASVIVDEAHGTGVFGEEGRGLVSALGLESHPALLAGMHSFGKALGVHGAVVVGSATLRKFLVNYARPLIYSTSLSLHSLACIRCSYLMQAKADDCRGRIFELSDMFQSMLADEKT---LDGTFP---LKARDVPRARSPIQSVVIAGNEQSLFVADSLRALGFDIRAIRMPTVPEGTERLRVTLHAYNTNDEVAALAHHIRRLAAKGNDTHVSENSTAEDIHARSNE 873
++MGC+LGRQ+ T+ F HND +HL+A L LR+ A S +N+FVAVESVYSMDGDLAPLREILGVA AH A VIVDEAHGTGVFGE+GRGLVSAL LE+HPALLAGMHSFGKA G HGAVVVGS TL+ FLVNYARPLIYSTSL L SLACIRC+YLMQA+ADD R R+ EL+D FQS+L+D DGT P L A+D+PR RSPIQSV+IAGNE+ L VADSLRALGFD+RAIR PTV EGTERLR+TLHAYNT++EV +LA HIRRLAA ++ S+A+ AR++E
Sbjct: 179 VRMGCRLGRQKETMLFRHNDFQHLEATLEGLRSRGAGSAPANIFVAVESVYSMDGDLAPLREILGVAAAHGALVIVDEAHGTGVFGEQGRGLVSALNLEAHPALLAGMHSFGKAFGAHGAVVVGSTTLKDFLVNYARPLIYSTSLPLDSLACIRCAYLMQARADDRRRRVLELADRFQSLLSDADVNSWADGTAPSPPLDAKDIPRHRSPIQSVLIAGNERCLLVADSLRALGFDVRAIRKPTVAEGTERLRITLHAYNTDEEVESLARHIRRLAA-------NKGSSADKARARTSE 469
BLAST of mRNA_H-elongata_contig55207.12929.1 vs. uniprot
Match: A0A835YWE3_9STRA (Pyridoxal phosphate-dependent transferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWE3_9STRA) HSP 1 Score: 291 bits (744), Expect = 9.310e-92 Identity = 157/269 (58.36%), Postives = 190/269 (70.63%), Query Frame = 1
Query: 1 IQMGCKLGRQRHTVFFHHNDIEHLDAVLRDLRAAEATSRSNLFVAVESVYSMDGDLAPLREILGVADAHMASVIVDEAHGTGVFGEEGRGLVSALGLESHPALLAGMHSFGKALGVHGAVVVGSATLRKFLVNYARPLIYSTSLSLHSLACIRCSYLMQAKADDCRGRIFELSDMFQSMLADEKTLDGTFPLKARDVPRARSPIQSVVIAGNEQSLFVADSLRALGFDIRAIRMPTVPEGTERLRVTLHAYNTNDEVAALAHHIRRLAA 807
+QMG KLGRQ + F HND HL VL LRAA +T R +FVA+ES+YSMDGD APL ++L VA+A+ A VIVDEAH TGV G G GLV ALGLE+ PAL +H+FGKALGVHGA V GSATLRKFL+NYARPLIYSTSL +HSLA IRCSY MQ R + L +F++ L D T PL D+ + SPIQ+V++ GNE+++ VAD LR GFD+R IR PTVPEGTERLR+ +HA+N+ +V L HHIR A
Sbjct: 150 MQMGMKLGRQTAQIAFRHNDCAHLQQVLSGLRAAGSTER--IFVALESIYSMDGDCAPLEQLLQVAEANGAWVIVDEAHATGVLGPNGEGLVGALGLENSPALFCSVHTFGKALGVHGAAVFGSATLRKFLINYARPLIYSTSLPMHSLAAIRCSYDMQRIMHAARSHVLNLVAIFRAELVAPSE-DDTPPLSPSDLVESTSPIQAVLVPGNERAIKVADLLREHGFDVRPIRKPTVPEGTERLRICIHAHNSVTQVRDLIHHIRAFKA 415
BLAST of mRNA_H-elongata_contig55207.12929.1 vs. uniprot
Match: A0A0L0HFA7_SPIPD (Aminotran_1_2 domain-containing protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HFA7_SPIPD) HSP 1 Score: 222 bits (566), Expect = 1.180e-65 Identity = 134/270 (49.63%), Postives = 176/270 (65.19%), Query Frame = 1
Query: 10 GCKLGRQRHTVFFHHNDIEHLDAVLRDLRAA-----EATSRSNLFVAVESVYSMDGDLAPLREILGVADAH--MASVIVDEAHGTGVFGEEGRGLVSALGLESHPALLAGMHSFGKALGVHGAVVVGSATLRKFLVNYARPLIYSTSLSLHSLACIRCSY-LMQAKADDCRGRIFELSDMFQSMLADEKTLDGTFPLKARDVPRARSPIQSVVIAGNEQSLFVADSLRALGFDIRAIRMPTVPEGTERLRVTLHAYNTNDEVAALAHHIR 795
G KLGR + F HN+++ L +L +L E T VAVES+YSMDGD+APL EI+ V + A ++VDEAH TGVFG +GRGLV ALGLES + A +H+FGKA+G HGAVV+GS TLR++LVNYARPL+YST + H L IRCSY + +A + R+ EL +F+ + GT P A +P + S IQ VV+AGN + + +A ++A GFD+R IR PTVP+G+ERLRV LHA+NT +V ALA IR
Sbjct: 134 GIKLGRAKCAKKFKHNNVDALRDLLTELLVGKEGQHERTLCKTAVVAVESLYSMDGDIAPLEEIVQVVEEFDGRACLVVDEAHSTGVFGPQGRGLVCALGLESR--VYARLHTFGKAIGSHGAVVLGSPTLREYLVNYARPLVYSTMIPYHGLVAIRCSYEYLMEEAAGLQTRMTELVQVFRQSV-------GTLPSGAALLP-SDSMIQGVVLAGNARVVALATKVQAKGFDVRPIRSPTVPKGSERLRVCLHAHNTRQQVLALAAAIR 393
BLAST of mRNA_H-elongata_contig55207.12929.1 vs. uniprot
Match: A0A812UBL8_SYMPI (BioF protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812UBL8_SYMPI) HSP 1 Score: 211 bits (538), Expect = 4.910e-62 Identity = 126/261 (48.28%), Postives = 163/261 (62.45%), Query Frame = 1
Query: 1 IQMGCKLGRQRHTVFFHHNDIEHLDAVLRDLRAAEATSRSNLFVAVESVYSMDGDLAPLREILGVADAHMASVIVDEAHGTGVFGEEGRGLVSALGLESHPALLAGMHSFGKALGVHGAVVVGSATLRKFLVNYARPLIYSTSLSLHSLACIRCSY-LMQAKADDCRGRIFELSDMFQSMLADEKTLDGTFPLKARDVPRARSPIQSVVIAGNEQSLFVADSLRALGFDIRAIRMPTVPEGTERLRVTLHAYNTNDEVAAL 780
++ G KL R R + F HNDI L + D+ A R N+ +AVESVYSMDG APL E +A++ AS++VDEAHGTGV+G EGRGLVS LGLES + +H+FGKALGVHGAVVVG L +L+NYA L+YSTSL LHSL +RC+Y M+ +A + + L FQ L L V ++ SPIQ +++ GN + VA +LR FD+ IR PTVP G ERLR+ LHA+NT ++V AL
Sbjct: 91 VREGMKLCRGR-AIQFRHNDISALRQAVADVLAGAYDRRPNIIIAVESVYSMDGHCAPLAEFCDIAESAGASLVVDEAHGTGVYGPEGRGLVSELGLESR--VFCRVHTFGKALGVHGAVVVGPRVLCDYLLNYAWSLVYSTSLPLHSLVAVRCAYSFMRREASKRQLHLQRLIQTFQKRLTS---------LPPDQVLQSSSPIQGLIVPGNSAVMAVAKNLRER-FDVLPIRSPTVPAGKERLRIILHAHNTEEQVHAL 338
BLAST of mRNA_H-elongata_contig55207.12929.1 vs. uniprot
Match: UPI0016490F81 (8-amino-7-oxononanoate synthase n=1 Tax=Spirosoma utsteinense TaxID=2585773 RepID=UPI0016490F81) HSP 1 Score: 212 bits (539), Expect = 7.410e-62 Identity = 120/258 (46.51%), Postives = 167/258 (64.73%), Query Frame = 1
Query: 10 GCKLG-RQRHTVFFHHNDIEHLDAVLRDLRAAEATSRSNLFVAVESVYSMDGDLAPLREILGVADAHMASVIVDEAHGTGVFGEEGRGLVSALGLESHPALLAGMHSFGKALGVHGAVVVGSATLRKFLVNYARPLIYSTSLSLHSLACIRCSYLMQAKADDCRGRIFELSDMFQSMLADEKTLDGTFPLKARDVPRARSPIQSVVIAGNEQSLFVADSLRALGFDIRAIRMPTVPEGTERLRVTLHAYNTNDEVAAL 780
G +L +RH F HND+ L+ LR + A A+ + +FVAVESVYSMDGD+APL+ ++ + D + A+++VDEAH TGVFG G GLV ALGL+ +LA +H+FGKALGVHGA VVGSA LR +L+N+ARP IYST+L HSL IRC++L+ + R ++ + FQ ++ + L R ++SPIQ +++ GN + VA + GFD+RAI PTVP G ERLR+ +HA+NT E+ L
Sbjct: 135 GARLSYAKRHR--FRHNDLADLEQQLRSVTGAAASGQ--VFVAVESVYSMDGDMAPLQALVDLCDRYGAALLVDEAHATGVFGPRGEGLVVALGLQDR--VLARIHTFGKALGVHGAAVVGSAVLRDYLINFARPFIYSTALPPHSLLAIRCAHLLLSTQPGPRQQLHDRLTYFQEQVSGK--------LPGRTWTNSQSPIQCLIVPGNHNARRVATVAQNAGFDVRAILSPTVPVGQERLRICIHAFNTEPEIDRL 378
BLAST of mRNA_H-elongata_contig55207.12929.1 vs. uniprot
Match: A0A515A9B4_9BACT (8-amino-7-oxononanoate synthase n=1 Tax=Spirosoma sp. KCTC 42546 TaxID=2520506 RepID=A0A515A9B4_9BACT) HSP 1 Score: 212 bits (539), Expect = 7.610e-62 Identity = 119/260 (45.77%), Postives = 169/260 (65.00%), Query Frame = 1
Query: 10 GCKLG---RQRHTVFFHHNDIEHLDAVLRDLRAAEATSRSNLFVAVESVYSMDGDLAPLREILGVADAHMASVIVDEAHGTGVFGEEGRGLVSALGLESHPALLAGMHSFGKALGVHGAVVVGSATLRKFLVNYARPLIYSTSLSLHSLACIRCSYLMQAKADDCRGRIFELSDMFQSMLADEKTLDGTFPLKARDVPRARSPIQSVVIAGNEQSLFVADSLRALGFDIRAIRMPTVPEGTERLRVTLHAYNTNDEVAAL 780
G +L RQR F HND+E L+ LR E + +FVAVESVYSMDGD+APLRE++ + D + A+++VDEAH TG++G G GLV ALGL+ + A +H+FGKALGVHGA +VG A LR++L+N+ARP IY+T+L HSL IRC+++ D R ++++ F+ A E D + +RSPI+ ++I GN+Q+ +VA +A+G D+RAI PTVP G ERLR+ +H++NT DE+ L
Sbjct: 135 GARLSYASRQR----FRHNDLEDLEYKLRQTH--ELQGKGQVFVAVESVYSMDGDVAPLRELVELCDRYDAALLVDEAHATGLYGPNGEGLVVALGLQER--VFARVHTFGKALGVHGAAIVGPAVLREYLINFARPFIYTTALPPHSLLAIRCAHVYVTTNTDNRTQLYKRLTHFRQR-ASELLPDALWT-------NSRSPIRCLIIPGNDQARYVASQAQAVGLDVRAILSPTVPVGQERLRLCIHSFNTTDEIDQL 378
BLAST of mRNA_H-elongata_contig55207.12929.1 vs. uniprot
Match: A0A0G4GIJ7_9ALVE (Aminotran_1_2 domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4GIJ7_9ALVE) HSP 1 Score: 213 bits (542), Expect = 9.340e-62 Identity = 128/279 (45.88%), Postives = 180/279 (64.52%), Query Frame = 1
Query: 1 IQMGCKLGRQRHTVFFHHNDIEHLDAVLRDLRAAEATSRSN--------LFVAVESVYSMDGDLAPLREILGVADAHMASVIVDEAHGTGVFGEEGRGLVSALGLESHPALLAGMHSFGKALGVHGAVVVGSATLRKFLVNYARPLIYSTSLSLHSLACIRCSY-LMQAKADDCRGRIFELSDMFQSMLADEKTLDGTFP-LKAR----DVPR-----ARSPIQSVVIAGNEQSLFVADSLRALGFDIRAIRMPTVPEGTERLRVTLHAYNTNDEVAAL 780
++ G +L R +V F HND++ L LR+ R + R + L VA+ES+YSMDG +APLREILGV + A ++VDEAH TGV G G GLV A GLE+HP+LLA +H+FGKALG HGAV++G L +FL+NYARPL+YST+L LHSL ++ +Y L+ +A + ++ L+ FQS TF L+A+ DVP + + +Q+++++GN++ ++ A+ LR GFD+R IR PTVP+GTERLRV LHA+N EV L
Sbjct: 139 VREGLRLSRGS-SVSFLHNDLKSLRERLREARVSSERRRKSSQRGREGFLVVAIESIYSMDGSVAPLREILGVCAEYGALLVVDEAHSTGVVGVRGEGLVVAEGLENHPSLLARVHTFGKALGAHGAVLLGPPVLCQFLLNYARPLVYSTALPLHSLCLVKAAYSLLSREALVLQRKLKRLTAEFQSQAVQ------TFQRLEAKRRHSDVPPPSPVLSDTQVQAILVSGNKRVVWYAEKLRPKGFDVRPIRSPTVPKGTERLRVVLHAHNHEAEVRGL 410
BLAST of mRNA_H-elongata_contig55207.12929.1 vs. uniprot
Match: A0A812MHK1_9DINO (BioF protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812MHK1_9DINO) HSP 1 Score: 223 bits (568), Expect = 9.740e-62 Identity = 132/258 (51.16%), Postives = 165/258 (63.95%), Query Frame = 1
Query: 10 GCKLGRQRHTVFFHHNDIEHLDAVLRDLRAAEATSRSNLFVAVESVYSMDGDLAPLREILGVADAHMASVIVDEAHGTGVFGEEGRGLVSALGLESHPALLAGMHSFGKALGVHGAVVVGSATLRKFLVNYARPLIYSTSLSLHSLACIRCSY-LMQAKADDCRGRIFELSDMFQSMLADEKTLDGTFPLKARDVPRARSPIQSVVIAGNEQSLFVADSLRALGFDIRAIRMPTVPEGTERLRVTLHAYNTNDEVAAL 780
G KL R + V F HND+ L + D+ A R N+ +AVESVYSMDG APLRE VAD+ AS++VDEAHGTGV+G+EGRGLVS LGLES + +H+FGKALGVHGA V+G LR++L+NYA PL+YSTSL LHSL IRC+Y M+ +A + + L FQ LA L V ++ SPIQ V++ GN + VA SLR FD+ IR PTVP G ERLR+ LHA+NT D+V L
Sbjct: 779 GLKLSRGK-AVQFRHNDVTALREAVADVLAGAHDKRPNIIIAVESVYSMDGHCAPLREFCDVADSVGASLVVDEAHGTGVYGKEGRGLVSELGLESR--VFCRVHTFGKALGVHGAAVLGPKVLREYLINYAWPLVYSTSLPLHSLVAIRCAYTFMRREASKRQIHLRRLIQTFQKRLAS---------LPPERVLQSDSPIQGVIVPGNAAVVAVARSLRER-FDVLPIRSPTVPAGKERLRIILHAHNTEDQVHGL 1023
BLAST of mRNA_H-elongata_contig55207.12929.1 vs. uniprot
Match: UPI0009B04F8F (8-amino-7-oxononanoate synthase n=1 Tax=Spirosoma rigui TaxID=564064 RepID=UPI0009B04F8F) HSP 1 Score: 210 bits (534), Expect = 3.410e-61 Identity = 120/260 (46.15%), Postives = 163/260 (62.69%), Query Frame = 1
Query: 10 GCKLG---RQRHTVFFHHNDIEHLDAVLRDLRAAEATSRSNLFVAVESVYSMDGDLAPLREILGVADAHMASVIVDEAHGTGVFGEEGRGLVSALGLESHPALLAGMHSFGKALGVHGAVVVGSATLRKFLVNYARPLIYSTSLSLHSLACIRCSYLMQAKADDCRGRIFELSDMFQSMLADEKTLDGTFPLKARDVPRARSPIQSVVIAGNEQSLFVADSLRALGFDIRAIRMPTVPEGTERLRVTLHAYNTNDEVAAL 780
G +L RQR F HND+ HL+ +LR + A S +FVAVES+YSMDGDLAPLR + + + + A ++VDEAH TGV+G G GLV ALGL+ + A +H+FGKALGVHGA VVGSA LR +L+N+ARP IYST+L HSL IRC++ R ++ + +F+ ++ D+ L + SPIQ +++ GNEQ+ VA + GFD+RAI PTVP G ERLR+ +HA+NT E+ L
Sbjct: 135 GARLSYATRQR----FRHNDLAHLETLLR----SAAESAGQVFVAVESLYSMDGDLAPLRALTNLCEQYGAVLLVDEAHATGVYGPNGEGLVVALGLQER--VFARVHTFGKALGVHGAAVVGSALLRDYLINFARPFIYSTALPPHSLLAIRCAHKQLRIQSASRQQLQDRLRLFRQLVTDQ--------LPGSTWTDSLSPIQCLIVPGNEQARRVAQQAQGAGFDVRAILSPTVPVGQERLRICIHAFNTETEITRL 376 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig55207.12929.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig55207.12929.1 >prot_H-elongata_contig55207.12929.1 ID=prot_H-elongata_contig55207.12929.1|Name=mRNA_H-elongata_contig55207.12929.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=306bp MGCKLGRQRHTVFFHHNDIEHLDAVLRDLRAAEATSRSNLFVAVESVYSMback to top mRNA from alignment at H-elongata_contig55207:634..2933+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig55207.12929.1 ID=mRNA_H-elongata_contig55207.12929.1|Name=mRNA_H-elongata_contig55207.12929.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2300bp|location=Sequence derived from alignment at H-elongata_contig55207:634..2933+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig55207:634..2933+ >mRNA_H-elongata_contig55207.12929.1 ID=mRNA_H-elongata_contig55207.12929.1|Name=mRNA_H-elongata_contig55207.12929.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1836bp|location=Sequence derived from alignment at H-elongata_contig55207:634..2933+ (Himanthalia elongata Himel1 dioecious)back to top |