mRNA_H-elongata_contig55207.12929.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig55207.12929.1
Unique NamemRNA_H-elongata_contig55207.12929.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig55207.12929.1 vs. uniprot
Match: D8LFH2_ECTSI (Putative 8-amino-7-oxononanoate synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFH2_ECTSI)

HSP 1 Score: 384 bits (985), Expect = 1.000e-129
Identity = 204/292 (69.86%), Postives = 237/292 (81.16%), Query Frame = 1
Query:    1 IQMGCKLGRQRHTVFFHHNDIEHLDAVLRDLRA-AEATSRSNLFVAVESVYSMDGDLAPLREILGVADAHMASVIVDEAHGTGVFGEEGRGLVSALGLESHPALLAGMHSFGKALGVHGAVVVGSATLRKFLVNYARPLIYSTSLSLHSLACIRCSYLMQAKADDCRGRIFELSDMFQSMLAD---EKTLDGTFP---LKARDVPRARSPIQSVVIAGNEQSLFVADSLRALGFDIRAIRMPTVPEGTERLRVTLHAYNTNDEVAALAHHIRRLAA-KGNDTHVSENSTAED 852
            ++MGC+LGRQ+ TV F HND +HL+  L  LR+    ++ +N+FVAVESVYSMDGDLAPLREILGVA AH A VIVDEAHGTGVFGE+GRGLVSAL LE+HPALLAGMHSFGKA G HGAVVVGSATL+ FLVNYARPLIYSTSL L SLACIRC+YLMQA ADD R R+ +L+D FQS+L+D    +   GT P   L A+D+PR RSPIQSV+IAGNE+ L VADSLRALGFD+RAIR PTV EGTERLR+TLHAYNT++EV +LA HIRRL A KGN    +   T+E+
Sbjct:   21 VRMGCRLGRQKETVLFRHNDFQHLETTLEGLRSRGPGSAPANIFVAVESVYSMDGDLAPLREILGVAAAHGALVIVDEAHGTGVFGEQGRGLVSALNLEAHPALLAGMHSFGKAFGAHGAVVVGSATLKDFLVNYARPLIYSTSLPLDSLACIRCAYLMQASADDRRKRVLDLADAFQSLLSDADVNRWAGGTAPPPPLDAKDIPRHRSPIQSVLIAGNERCLLVADSLRALGFDVRAIRKPTVAEGTERLRITLHAYNTDEEVESLARHIRRLTANKGNSADKARARTSEE 312          
BLAST of mRNA_H-elongata_contig55207.12929.1 vs. uniprot
Match: A0A6H5KGC3_9PHAE (Aminotran_1_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGC3_9PHAE)

HSP 1 Score: 387 bits (994), Expect = 8.030e-129
Identity = 208/298 (69.80%), Postives = 242/298 (81.21%), Query Frame = 1
Query:    1 IQMGCKLGRQRHTVFFHHNDIEHLDAVLRDLRAAEATSR-SNLFVAVESVYSMDGDLAPLREILGVADAHMASVIVDEAHGTGVFGEEGRGLVSALGLESHPALLAGMHSFGKALGVHGAVVVGSATLRKFLVNYARPLIYSTSLSLHSLACIRCSYLMQAKADDCRGRIFELSDMFQSMLADEKT---LDGTFP---LKARDVPRARSPIQSVVIAGNEQSLFVADSLRALGFDIRAIRMPTVPEGTERLRVTLHAYNTNDEVAALAHHIRRLAAKGNDTHVSENSTAEDIHARSNE 873
            ++MGC+LGRQ+ T+ F HND +HL+A L  LR+  A S  +N+FVAVESVYSMDGDLAPLREILGVA AH A VIVDEAHGTGVFGE+GRGLVSAL LE+HPALLAGMHSFGKA G HGAVVVGS TL+ FLVNYARPLIYSTSL L SLACIRC+YLMQA+ADD R R+ EL+D FQS+L+D       DGT P   L A+D+PR RSPIQSV+IAGNE+ L VADSLRALGFD+RAIR PTV EGTERLR+TLHAYNT++EV +LA HIRRLAA       ++ S+A+   AR++E
Sbjct:  179 VRMGCRLGRQKETMLFRHNDFQHLEATLEGLRSRGAGSAPANIFVAVESVYSMDGDLAPLREILGVAAAHGALVIVDEAHGTGVFGEQGRGLVSALNLEAHPALLAGMHSFGKAFGAHGAVVVGSTTLKDFLVNYARPLIYSTSLPLDSLACIRCAYLMQARADDRRRRVLELADRFQSLLSDADVNSWADGTAPSPPLDAKDIPRHRSPIQSVLIAGNERCLLVADSLRALGFDVRAIRKPTVAEGTERLRITLHAYNTDEEVESLARHIRRLAA-------NKGSSADKARARTSE 469          
BLAST of mRNA_H-elongata_contig55207.12929.1 vs. uniprot
Match: A0A835YWE3_9STRA (Pyridoxal phosphate-dependent transferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWE3_9STRA)

HSP 1 Score: 291 bits (744), Expect = 9.310e-92
Identity = 157/269 (58.36%), Postives = 190/269 (70.63%), Query Frame = 1
Query:    1 IQMGCKLGRQRHTVFFHHNDIEHLDAVLRDLRAAEATSRSNLFVAVESVYSMDGDLAPLREILGVADAHMASVIVDEAHGTGVFGEEGRGLVSALGLESHPALLAGMHSFGKALGVHGAVVVGSATLRKFLVNYARPLIYSTSLSLHSLACIRCSYLMQAKADDCRGRIFELSDMFQSMLADEKTLDGTFPLKARDVPRARSPIQSVVIAGNEQSLFVADSLRALGFDIRAIRMPTVPEGTERLRVTLHAYNTNDEVAALAHHIRRLAA 807
            +QMG KLGRQ   + F HND  HL  VL  LRAA +T R  +FVA+ES+YSMDGD APL ++L VA+A+ A VIVDEAH TGV G  G GLV ALGLE+ PAL   +H+FGKALGVHGA V GSATLRKFL+NYARPLIYSTSL +HSLA IRCSY MQ      R  +  L  +F++ L      D T PL   D+  + SPIQ+V++ GNE+++ VAD LR  GFD+R IR PTVPEGTERLR+ +HA+N+  +V  L HHIR   A
Sbjct:  150 MQMGMKLGRQTAQIAFRHNDCAHLQQVLSGLRAAGSTER--IFVALESIYSMDGDCAPLEQLLQVAEANGAWVIVDEAHATGVLGPNGEGLVGALGLENSPALFCSVHTFGKALGVHGAAVFGSATLRKFLINYARPLIYSTSLPMHSLAAIRCSYDMQRIMHAARSHVLNLVAIFRAELVAPSE-DDTPPLSPSDLVESTSPIQAVLVPGNERAIKVADLLREHGFDVRPIRKPTVPEGTERLRICIHAHNSVTQVRDLIHHIRAFKA 415          
BLAST of mRNA_H-elongata_contig55207.12929.1 vs. uniprot
Match: A0A0L0HFA7_SPIPD (Aminotran_1_2 domain-containing protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HFA7_SPIPD)

HSP 1 Score: 222 bits (566), Expect = 1.180e-65
Identity = 134/270 (49.63%), Postives = 176/270 (65.19%), Query Frame = 1
Query:   10 GCKLGRQRHTVFFHHNDIEHLDAVLRDLRAA-----EATSRSNLFVAVESVYSMDGDLAPLREILGVADAH--MASVIVDEAHGTGVFGEEGRGLVSALGLESHPALLAGMHSFGKALGVHGAVVVGSATLRKFLVNYARPLIYSTSLSLHSLACIRCSY-LMQAKADDCRGRIFELSDMFQSMLADEKTLDGTFPLKARDVPRARSPIQSVVIAGNEQSLFVADSLRALGFDIRAIRMPTVPEGTERLRVTLHAYNTNDEVAALAHHIR 795
            G KLGR +    F HN+++ L  +L +L        E T      VAVES+YSMDGD+APL EI+ V +     A ++VDEAH TGVFG +GRGLV ALGLES   + A +H+FGKA+G HGAVV+GS TLR++LVNYARPL+YST +  H L  IRCSY  +  +A   + R+ EL  +F+  +       GT P  A  +P + S IQ VV+AGN + + +A  ++A GFD+R IR PTVP+G+ERLRV LHA+NT  +V ALA  IR
Sbjct:  134 GIKLGRAKCAKKFKHNNVDALRDLLTELLVGKEGQHERTLCKTAVVAVESLYSMDGDIAPLEEIVQVVEEFDGRACLVVDEAHSTGVFGPQGRGLVCALGLESR--VYARLHTFGKAIGSHGAVVLGSPTLREYLVNYARPLVYSTMIPYHGLVAIRCSYEYLMEEAAGLQTRMTELVQVFRQSV-------GTLPSGAALLP-SDSMIQGVVLAGNARVVALATKVQAKGFDVRPIRSPTVPKGSERLRVCLHAHNTRQQVLALAAAIR 393          
BLAST of mRNA_H-elongata_contig55207.12929.1 vs. uniprot
Match: A0A812UBL8_SYMPI (BioF protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812UBL8_SYMPI)

HSP 1 Score: 211 bits (538), Expect = 4.910e-62
Identity = 126/261 (48.28%), Postives = 163/261 (62.45%), Query Frame = 1
Query:    1 IQMGCKLGRQRHTVFFHHNDIEHLDAVLRDLRAAEATSRSNLFVAVESVYSMDGDLAPLREILGVADAHMASVIVDEAHGTGVFGEEGRGLVSALGLESHPALLAGMHSFGKALGVHGAVVVGSATLRKFLVNYARPLIYSTSLSLHSLACIRCSY-LMQAKADDCRGRIFELSDMFQSMLADEKTLDGTFPLKARDVPRARSPIQSVVIAGNEQSLFVADSLRALGFDIRAIRMPTVPEGTERLRVTLHAYNTNDEVAAL 780
            ++ G KL R R  + F HNDI  L   + D+ A     R N+ +AVESVYSMDG  APL E   +A++  AS++VDEAHGTGV+G EGRGLVS LGLES   +   +H+FGKALGVHGAVVVG   L  +L+NYA  L+YSTSL LHSL  +RC+Y  M+ +A   +  +  L   FQ  L           L    V ++ SPIQ +++ GN   + VA +LR   FD+  IR PTVP G ERLR+ LHA+NT ++V AL
Sbjct:   91 VREGMKLCRGR-AIQFRHNDISALRQAVADVLAGAYDRRPNIIIAVESVYSMDGHCAPLAEFCDIAESAGASLVVDEAHGTGVYGPEGRGLVSELGLESR--VFCRVHTFGKALGVHGAVVVGPRVLCDYLLNYAWSLVYSTSLPLHSLVAVRCAYSFMRREASKRQLHLQRLIQTFQKRLTS---------LPPDQVLQSSSPIQGLIVPGNSAVMAVAKNLRER-FDVLPIRSPTVPAGKERLRIILHAHNTEEQVHAL 338          
BLAST of mRNA_H-elongata_contig55207.12929.1 vs. uniprot
Match: UPI0016490F81 (8-amino-7-oxononanoate synthase n=1 Tax=Spirosoma utsteinense TaxID=2585773 RepID=UPI0016490F81)

HSP 1 Score: 212 bits (539), Expect = 7.410e-62
Identity = 120/258 (46.51%), Postives = 167/258 (64.73%), Query Frame = 1
Query:   10 GCKLG-RQRHTVFFHHNDIEHLDAVLRDLRAAEATSRSNLFVAVESVYSMDGDLAPLREILGVADAHMASVIVDEAHGTGVFGEEGRGLVSALGLESHPALLAGMHSFGKALGVHGAVVVGSATLRKFLVNYARPLIYSTSLSLHSLACIRCSYLMQAKADDCRGRIFELSDMFQSMLADEKTLDGTFPLKARDVPRARSPIQSVVIAGNEQSLFVADSLRALGFDIRAIRMPTVPEGTERLRVTLHAYNTNDEVAAL 780
            G +L   +RH   F HND+  L+  LR +  A A+ +  +FVAVESVYSMDGD+APL+ ++ + D + A+++VDEAH TGVFG  G GLV ALGL+    +LA +H+FGKALGVHGA VVGSA LR +L+N+ARP IYST+L  HSL  IRC++L+ +     R ++ +    FQ  ++ +        L  R    ++SPIQ +++ GN  +  VA   +  GFD+RAI  PTVP G ERLR+ +HA+NT  E+  L
Sbjct:  135 GARLSYAKRHR--FRHNDLADLEQQLRSVTGAAASGQ--VFVAVESVYSMDGDMAPLQALVDLCDRYGAALLVDEAHATGVFGPRGEGLVVALGLQDR--VLARIHTFGKALGVHGAAVVGSAVLRDYLINFARPFIYSTALPPHSLLAIRCAHLLLSTQPGPRQQLHDRLTYFQEQVSGK--------LPGRTWTNSQSPIQCLIVPGNHNARRVATVAQNAGFDVRAILSPTVPVGQERLRICIHAFNTEPEIDRL 378          
BLAST of mRNA_H-elongata_contig55207.12929.1 vs. uniprot
Match: A0A515A9B4_9BACT (8-amino-7-oxononanoate synthase n=1 Tax=Spirosoma sp. KCTC 42546 TaxID=2520506 RepID=A0A515A9B4_9BACT)

HSP 1 Score: 212 bits (539), Expect = 7.610e-62
Identity = 119/260 (45.77%), Postives = 169/260 (65.00%), Query Frame = 1
Query:   10 GCKLG---RQRHTVFFHHNDIEHLDAVLRDLRAAEATSRSNLFVAVESVYSMDGDLAPLREILGVADAHMASVIVDEAHGTGVFGEEGRGLVSALGLESHPALLAGMHSFGKALGVHGAVVVGSATLRKFLVNYARPLIYSTSLSLHSLACIRCSYLMQAKADDCRGRIFELSDMFQSMLADEKTLDGTFPLKARDVPRARSPIQSVVIAGNEQSLFVADSLRALGFDIRAIRMPTVPEGTERLRVTLHAYNTNDEVAAL 780
            G +L    RQR    F HND+E L+  LR     E   +  +FVAVESVYSMDGD+APLRE++ + D + A+++VDEAH TG++G  G GLV ALGL+    + A +H+FGKALGVHGA +VG A LR++L+N+ARP IY+T+L  HSL  IRC+++      D R ++++    F+   A E   D  +         +RSPI+ ++I GN+Q+ +VA   +A+G D+RAI  PTVP G ERLR+ +H++NT DE+  L
Sbjct:  135 GARLSYASRQR----FRHNDLEDLEYKLRQTH--ELQGKGQVFVAVESVYSMDGDVAPLRELVELCDRYDAALLVDEAHATGLYGPNGEGLVVALGLQER--VFARVHTFGKALGVHGAAIVGPAVLREYLINFARPFIYTTALPPHSLLAIRCAHVYVTTNTDNRTQLYKRLTHFRQR-ASELLPDALWT-------NSRSPIRCLIIPGNDQARYVASQAQAVGLDVRAILSPTVPVGQERLRLCIHSFNTTDEIDQL 378          
BLAST of mRNA_H-elongata_contig55207.12929.1 vs. uniprot
Match: A0A0G4GIJ7_9ALVE (Aminotran_1_2 domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4GIJ7_9ALVE)

HSP 1 Score: 213 bits (542), Expect = 9.340e-62
Identity = 128/279 (45.88%), Postives = 180/279 (64.52%), Query Frame = 1
Query:    1 IQMGCKLGRQRHTVFFHHNDIEHLDAVLRDLRAAEATSRSN--------LFVAVESVYSMDGDLAPLREILGVADAHMASVIVDEAHGTGVFGEEGRGLVSALGLESHPALLAGMHSFGKALGVHGAVVVGSATLRKFLVNYARPLIYSTSLSLHSLACIRCSY-LMQAKADDCRGRIFELSDMFQSMLADEKTLDGTFP-LKAR----DVPR-----ARSPIQSVVIAGNEQSLFVADSLRALGFDIRAIRMPTVPEGTERLRVTLHAYNTNDEVAAL 780
            ++ G +L R   +V F HND++ L   LR+ R +    R +        L VA+ES+YSMDG +APLREILGV   + A ++VDEAH TGV G  G GLV A GLE+HP+LLA +H+FGKALG HGAV++G   L +FL+NYARPL+YST+L LHSL  ++ +Y L+  +A   + ++  L+  FQS          TF  L+A+    DVP      + + +Q+++++GN++ ++ A+ LR  GFD+R IR PTVP+GTERLRV LHA+N   EV  L
Sbjct:  139 VREGLRLSRGS-SVSFLHNDLKSLRERLREARVSSERRRKSSQRGREGFLVVAIESIYSMDGSVAPLREILGVCAEYGALLVVDEAHSTGVVGVRGEGLVVAEGLENHPSLLARVHTFGKALGAHGAVLLGPPVLCQFLLNYARPLVYSTALPLHSLCLVKAAYSLLSREALVLQRKLKRLTAEFQSQAVQ------TFQRLEAKRRHSDVPPPSPVLSDTQVQAILVSGNKRVVWYAEKLRPKGFDVRPIRSPTVPKGTERLRVVLHAHNHEAEVRGL 410          
BLAST of mRNA_H-elongata_contig55207.12929.1 vs. uniprot
Match: A0A812MHK1_9DINO (BioF protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812MHK1_9DINO)

HSP 1 Score: 223 bits (568), Expect = 9.740e-62
Identity = 132/258 (51.16%), Postives = 165/258 (63.95%), Query Frame = 1
Query:   10 GCKLGRQRHTVFFHHNDIEHLDAVLRDLRAAEATSRSNLFVAVESVYSMDGDLAPLREILGVADAHMASVIVDEAHGTGVFGEEGRGLVSALGLESHPALLAGMHSFGKALGVHGAVVVGSATLRKFLVNYARPLIYSTSLSLHSLACIRCSY-LMQAKADDCRGRIFELSDMFQSMLADEKTLDGTFPLKARDVPRARSPIQSVVIAGNEQSLFVADSLRALGFDIRAIRMPTVPEGTERLRVTLHAYNTNDEVAAL 780
            G KL R +  V F HND+  L   + D+ A     R N+ +AVESVYSMDG  APLRE   VAD+  AS++VDEAHGTGV+G+EGRGLVS LGLES   +   +H+FGKALGVHGA V+G   LR++L+NYA PL+YSTSL LHSL  IRC+Y  M+ +A   +  +  L   FQ  LA          L    V ++ SPIQ V++ GN   + VA SLR   FD+  IR PTVP G ERLR+ LHA+NT D+V  L
Sbjct:  779 GLKLSRGK-AVQFRHNDVTALREAVADVLAGAHDKRPNIIIAVESVYSMDGHCAPLREFCDVADSVGASLVVDEAHGTGVYGKEGRGLVSELGLESR--VFCRVHTFGKALGVHGAAVLGPKVLREYLINYAWPLVYSTSLPLHSLVAIRCAYTFMRREASKRQIHLRRLIQTFQKRLAS---------LPPERVLQSDSPIQGVIVPGNAAVVAVARSLRER-FDVLPIRSPTVPAGKERLRIILHAHNTEDQVHGL 1023          
BLAST of mRNA_H-elongata_contig55207.12929.1 vs. uniprot
Match: UPI0009B04F8F (8-amino-7-oxononanoate synthase n=1 Tax=Spirosoma rigui TaxID=564064 RepID=UPI0009B04F8F)

HSP 1 Score: 210 bits (534), Expect = 3.410e-61
Identity = 120/260 (46.15%), Postives = 163/260 (62.69%), Query Frame = 1
Query:   10 GCKLG---RQRHTVFFHHNDIEHLDAVLRDLRAAEATSRSNLFVAVESVYSMDGDLAPLREILGVADAHMASVIVDEAHGTGVFGEEGRGLVSALGLESHPALLAGMHSFGKALGVHGAVVVGSATLRKFLVNYARPLIYSTSLSLHSLACIRCSYLMQAKADDCRGRIFELSDMFQSMLADEKTLDGTFPLKARDVPRARSPIQSVVIAGNEQSLFVADSLRALGFDIRAIRMPTVPEGTERLRVTLHAYNTNDEVAAL 780
            G +L    RQR    F HND+ HL+ +LR    + A S   +FVAVES+YSMDGDLAPLR +  + + + A ++VDEAH TGV+G  G GLV ALGL+    + A +H+FGKALGVHGA VVGSA LR +L+N+ARP IYST+L  HSL  IRC++         R ++ +   +F+ ++ D+        L       + SPIQ +++ GNEQ+  VA   +  GFD+RAI  PTVP G ERLR+ +HA+NT  E+  L
Sbjct:  135 GARLSYATRQR----FRHNDLAHLETLLR----SAAESAGQVFVAVESLYSMDGDLAPLRALTNLCEQYGAVLLVDEAHATGVYGPNGEGLVVALGLQER--VFARVHTFGKALGVHGAAVVGSALLRDYLINFARPFIYSTALPPHSLLAIRCAHKQLRIQSASRQQLQDRLRLFRQLVTDQ--------LPGSTWTDSLSPIQCLIVPGNEQARRVAQQAQGAGFDVRAILSPTVPVGQERLRICIHAFNTETEITRL 376          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig55207.12929.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFH2_ECTSI1.000e-12969.86Putative 8-amino-7-oxononanoate synthase n=1 Tax=E... [more]
A0A6H5KGC3_9PHAE8.030e-12969.80Aminotran_1_2 domain-containing protein n=1 Tax=Ec... [more]
A0A835YWE3_9STRA9.310e-9258.36Pyridoxal phosphate-dependent transferase n=1 Tax=... [more]
A0A0L0HFA7_SPIPD1.180e-6549.63Aminotran_1_2 domain-containing protein n=2 Tax=Sp... [more]
A0A812UBL8_SYMPI4.910e-6248.28BioF protein n=1 Tax=Symbiodinium pilosum TaxID=29... [more]
UPI0016490F817.410e-6246.518-amino-7-oxononanoate synthase n=1 Tax=Spirosoma ... [more]
A0A515A9B4_9BACT7.610e-6245.778-amino-7-oxononanoate synthase n=1 Tax=Spirosoma ... [more]
A0A0G4GIJ7_9ALVE9.340e-6245.88Aminotran_1_2 domain-containing protein n=1 Tax=Ch... [more]
A0A812MHK1_9DINO9.740e-6251.16BioF protein n=1 Tax=Symbiodinium natans TaxID=878... [more]
UPI0009B04F8F3.410e-6146.158-amino-7-oxononanoate synthase n=1 Tax=Spirosoma ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig55207contigH-elongata_contig55207:634..2933 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score384.0
Seed ortholog evalue6.4e-104
Seed eggNOG ortholog2880.D8LFH2
KEGG rclassRC00004,RC00039,RC02725
KEGG koko:K00652
KEGG ReactionR03210,R10124
KEGG Pathwayko00780,ko01100,map00780,map01100
KEGG ModuleM00123,M00573,M00577
EggNOG free text desc.glycine C-acetyltransferase activity
EggNOG OGsCOG0156@1,KOG1359@2759
EC2.3.1.47
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01007
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionputative 8-amino-7-oxononanoate synthase
Ec32 orthologEc-04_002200.1
Exons5
Model size1076
Cds size918
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930899.986583-UTR-H-elongata_contig55207:633..6391622930899.986583-UTR-H-elongata_contig55207:633..639Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig55207 634..639 +
1691679617.1107721-UTR-H-elongata_contig55207:633..6391691679617.1107721-UTR-H-elongata_contig55207:633..639Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig55207 634..639 +
1622930900.1063886-UTR-H-elongata_contig55207:2781..29331622930900.1063886-UTR-H-elongata_contig55207:2781..2933Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig55207 2782..2933 +
1691679617.1782498-UTR-H-elongata_contig55207:2781..29331691679617.1782498-UTR-H-elongata_contig55207:2781..2933Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig55207 2782..2933 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930900.0073082-CDS-H-elongata_contig55207:639..8721622930900.0073082-CDS-H-elongata_contig55207:639..872Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig55207 640..872 +
1691679617.1249058-CDS-H-elongata_contig55207:639..8721691679617.1249058-CDS-H-elongata_contig55207:639..872Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig55207 640..872 +
1622930900.0222087-CDS-H-elongata_contig55207:1065..12691622930900.0222087-CDS-H-elongata_contig55207:1065..1269Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig55207 1066..1269 +
1691679617.1348906-CDS-H-elongata_contig55207:1065..12691691679617.1348906-CDS-H-elongata_contig55207:1065..1269Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig55207 1066..1269 +
1622930900.0383358-CDS-H-elongata_contig55207:1633..17231622930900.0383358-CDS-H-elongata_contig55207:1633..1723Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig55207 1634..1723 +
1691679617.1447637-CDS-H-elongata_contig55207:1633..17231691679617.1447637-CDS-H-elongata_contig55207:1633..1723Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig55207 1634..1723 +
1622930900.0672865-CDS-H-elongata_contig55207:1995..22301622930900.0672865-CDS-H-elongata_contig55207:1995..2230Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig55207 1996..2230 +
1691679617.154527-CDS-H-elongata_contig55207:1995..22301691679617.154527-CDS-H-elongata_contig55207:1995..2230Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig55207 1996..2230 +
1622930900.0857227-CDS-H-elongata_contig55207:2625..27811622930900.0857227-CDS-H-elongata_contig55207:2625..2781Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig55207 2626..2781 +
1691679617.166507-CDS-H-elongata_contig55207:2625..27811691679617.166507-CDS-H-elongata_contig55207:2625..2781Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig55207 2626..2781 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig55207.12929.1prot_H-elongata_contig55207.12929.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig55207 640..2781 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig55207.12929.1

>prot_H-elongata_contig55207.12929.1 ID=prot_H-elongata_contig55207.12929.1|Name=mRNA_H-elongata_contig55207.12929.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=306bp
MGCKLGRQRHTVFFHHNDIEHLDAVLRDLRAAEATSRSNLFVAVESVYSM
DGDLAPLREILGVADAHMASVIVDEAHGTGVFGEEGRGLVSALGLESHPA
LLAGMHSFGKALGVHGAVVVGSATLRKFLVNYARPLIYSTSLSLHSLACI
RCSYLMQAKADDCRGRIFELSDMFQSMLADEKTLDGTFPLKARDVPRARS
PIQSVVIAGNEQSLFVADSLRALGFDIRAIRMPTVPEGTERLRVTLHAYN
TNDEVAALAHHIRRLAAKGNDTHVSENSTAEDIHARSNERPRDSRSSLNT
TRARL*
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mRNA from alignment at H-elongata_contig55207:634..2933+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig55207.12929.1 ID=mRNA_H-elongata_contig55207.12929.1|Name=mRNA_H-elongata_contig55207.12929.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2300bp|location=Sequence derived from alignment at H-elongata_contig55207:634..2933+ (Himanthalia elongata Himel1 dioecious)
ATCCAGATGGGCTGTAAGCTGGGACGGCAGCGACATACTGTCTTCTTTCA TCACAACGACATCGAACATTTGGATGCCGTGCTTCGGGACCTGAGAGCCG CAGAAGCGACATCCCGTTCGAACCTGTTCGTCGCGGTGGAGAGCGTGTAC TCGATGGATGGAGACCTGGCTCCGTTGAGGGAGATCTTAGGCGTCGCGGA CGCCCACATGGCATCGGTCATCGTGGACGAAGCACACGGGTGAGCCTCAT ACTTAGGCATGAGTATTTGTTACCGCGGGGTCCATCCCGTGCCTTGGATC ATAAACGACTGATAAAGAGAGCCTAGTGAAATACCGGGCAGCGAATGAAC AGTGCCGATTGTTTATATAATTATTCCATAATGTCCGTCCTCGATGCAAG CTCCGCTGACCAAATCCTATGATTCACGCCAGAACGGGAGTCTTCGGGGA AGAGGGGCGAGGACTTGTGTCCGCGCTGGGCCTCGAGTCCCATCCCGCCC TGCTCGCCGGTATGCACTCGTTCGGGAAGGCCCTGGGCGTGCACGGTGCG GTCGTCGTCGGAAGTGCCACTCTGAGAAAGTTCCTGGTAAACTACGCCCG GCCGCTCATCTACTCCACGTCGCTCTCCTTGCACAGGTGTGCGTCTTTTG TCGCGCAAAATGGCTGCCTTCCCTTGATCATGCCTTCGGTCAGTTTCCAG AAGAATATTCAGAGTGTAGTTCCAAGCATGCAGGCGTTGTTGTTTTTAAA TGTCTAGTTCGCAGAATTACCACGTTAGCCCAGAGAACGGCGTGCCGAGG TTATCACAACCTCGCCTCTGTGGGAGAGAAGGATAAGATAGGGAACGTAC TCTCTAGACGTTTGTAGCAACGCCTTCGTGACGAAATCCACTGTCATGTA CCGGGTATGTATGGTCGCACAAGGACAATGATGTGCTCTTGACCCGCTGT TACTGGGTGTCCGTACCTTTGGTTTATTGATGGTGTGTCCGACTCTGCAG CCTGGCGTGCATCCGGTGCTCGTACTTGATGCAAGCGAAGGCGGACGACT GTCGAGGGAGAATATTTGAGCTGTCGGACATGTTTCAGAGGTGGGTTGCG GTAAACTTGATGCTGTCGATTGAACGCTCCCTCCCCGTTACCATGGTCTA TGTGGCATGTGCTGACGTGCGACTTTAGCGTGACGGTTACTCACGCGCGC CTTCTGCGTACTACAATGGTACGCTGGAGCGCTCCGACACAGGAAATGTA GTATATTGTGCGTGTTGAAGCCGACTCACCCATTTTGCTTCCTTGGTGAC TTGATCCTTCTGGATTCATGCTCCCCCCTTGCCTTCTCGTTTTCCTCCTT CCTTGTGCCTAGTATGCTCGCCGACGAGAAGACGCTGGATGGTACATTCC CCTTAAAAGCTCGGGACGTGCCTCGCGCCCGCTCTCCTATACAGTCAGTC GTTATTGCTGGCAACGAGCAATCGTTGTTTGTCGCCGACTCGCTTCGTGC CCTGGGTTTTGACATTCGGGCCATTCGAATGCCAACCGTGCCGGAAGGAA CGGAGCGATTGCGGGTGACCTTGCACGCATACAACACAAATGATGAGGTA AAAGCAAAACCTGTTATTCTGGCTCGCTGCAGATGGTTCCAGCAGAAGTA CGGAGGGTTAGGGGCTTGCTCGATCCTGCGAAGGGCAGGAAGTTACTGTC GATCGATTGTAAGACGGGACTCATGTATTAATACTACAGCTCTAGGACAA CCAAGAACTCGCGTGTGGTAGGTCCCAGGCAGCAGTTGAAAGACAACGCT CCAAATAAATAAATATTTCACGGCAGGATATCGGACGGATTTCGAAGACA AAACTCTCCCTCTCCTTGCCATTTTTTAGCGCGCGTAGCGCTATAGATTC CTTTGACTTCCTGGGATTATAATGTGTGTCACGCAAAATTCCGCAAACGT TTATACTTGTACCGCCTTTTGCTCGCACCTTGTCCGCATCAGGTCGCCGC TCTGGCGCATCATATTCGTCGACTTGCGGCAAAGGGCAATGATACGCATG TTTCAGAAAACTCAACGGCCGAGGACATACACGCACGTTCGAACGAGCGC CCCAGAGATTCGCGATCGTCCTTGAATACGACTCGGGCAAGATTGTGACA AAAATAAAATAAAAAGAGAACTTGTGGATTGAATCGGAAGGTTAGTTGTT CTCCGGCCTCGGAAGCACTCTGACCTCGAGAGCGCTCTGGTAGAGAGCTT ACGGATGCTTTATCAAACAAAAGCTAAAGCTCGGGGGTTCCAGTAAACCA
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Coding sequence (CDS) from alignment at H-elongata_contig55207:634..2933+

>mRNA_H-elongata_contig55207.12929.1 ID=mRNA_H-elongata_contig55207.12929.1|Name=mRNA_H-elongata_contig55207.12929.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1836bp|location=Sequence derived from alignment at H-elongata_contig55207:634..2933+ (Himanthalia elongata Himel1 dioecious)
ATGGGCTGTAAGCTGGGACGGCAGCGACATACTGTCTTCTTTCATCACAA
CGACATCGAACATTTGGATGCCGTGCTTCGGGACCTGAGAGCCGCAGAAG
CGACATCCCGTTCGAACCTGTTCGTCGCGGTGGAGAGCGTGTACTCGATG
GATGGAGACCTGGCTCCGTTGAGGGAGATCTTAGGCGTCGCGGACGCCCA
CATGGCATCGGTCATCGTGGACGAAGCACACGGATGGGCTGTAAGCTGGG
ACGGCAGCGACATACTGTCTTCTTTCATCACAACGACATCGAACATTTGG
ATGCCGTGCTTCGGGACCTGAGAGCCGCAGAAGCGACATCCCGTTCGAAC
CTGTTCGTCGCGGTGGAGAGCGTGTACTCGATGGATGGAGACCTGGCTCC
GTTGAGGGAGATCTTAGGCGTCGCGGACGCCCACATGGCATCGGTCATCG
TGGACGAAGCACACGGAACGGGAGTCTTCGGGGAAGAGGGGCGAGGACTT
GTGTCCGCGCTGGGCCTCGAGTCCCATCCCGCCCTGCTCGCCGGTATGCA
CTCGTTCGGGAAGGCCCTGGGCGTGCACGGTGCGGTCGTCGTCGGAAGTG
CCACTCTGAGAAAGTTCCTGGTAAACTACGCCCGGCCGCTCATCTACTCC
ACGTCGCTCTCCTTGCACAGAACGGGAGTCTTCGGGGAAGAGGGGCGAGG
ACTTGTGTCCGCGCTGGGCCTCGAGTCCCATCCCGCCCTGCTCGCCGGTA
TGCACTCGTTCGGGAAGGCCCTGGGCGTGCACGGTGCGGTCGTCGTCGGA
AGTGCCACTCTGAGAAAGTTCCTGGTAAACTACGCCCGGCCGCTCATCTA
CTCCACGTCGCTCTCCTTGCACAGCCTGGCGTGCATCCGGTGCTCGTACT
TGATGCAAGCGAAGGCGGACGACTGTCGAGGGAGAATATTTGAGCTGTCG
GACATGTTTCAGAGCCTGGCGTGCATCCGGTGCTCGTACTTGATGCAAGC
GAAGGCGGACGACTGTCGAGGGAGAATATTTGAGCTGTCGGACATGTTTC
AGAGTATGCTCGCCGACGAGAAGACGCTGGATGGTACATTCCCCTTAAAA
GCTCGGGACGTGCCTCGCGCCCGCTCTCCTATACAGTCAGTCGTTATTGC
TGGCAACGAGCAATCGTTGTTTGTCGCCGACTCGCTTCGTGCCCTGGGTT
TTGACATTCGGGCCATTCGAATGCCAACCGTGCCGGAAGGAACGGAGCGA
TTGCGGGTGACCTTGCACGCATACAACACAAATGATGAGTATGCTCGCCG
ACGAGAAGACGCTGGATGGTACATTCCCCTTAAAAGCTCGGGACGTGCCT
CGCGCCCGCTCTCCTATACAGTCAGTCGTTATTGCTGGCAACGAGCAATC
GTTGTTTGTCGCCGACTCGCTTCGTGCCCTGGGTTTTGACATTCGGGCCA
TTCGAATGCCAACCGTGCCGGAAGGAACGGAGCGATTGCGGGTGACCTTG
CACGCATACAACACAAATGATGAGGTCGCCGCTCTGGCGCATCATATTCG
TCGACTTGCGGCAAAGGGCAATGATACGCATGTTTCAGAAAACTCAACGG
CCGAGGACATACACGCACGTTCGAACGAGCGCCCCAGAGATTCGCGATCG
TCCTTGAATACGACTCGGGCAAGATTGTGAGTCGCCGCTCTGGCGCATCA
TATTCGTCGACTTGCGGCAAAGGGCAATGATACGCATGTTTCAGAAAACT
CAACGGCCGAGGACATACACGCACGTTCGAACGAGCGCCCCAGAGATTCG
CGATCGTCCTTGAATACGACTCGGGCAAGATTGTGA
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