mRNA_H-elongata_contig55089.12912.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig55089.12912.1 vs. uniprot
Match: A0A6H5JWI3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI3_9PHAE) HSP 1 Score: 460 bits (1183), Expect = 2.340e-147 Identity = 263/612 (42.97%), Postives = 353/612 (57.68%), Query Frame = 1
Query: 7 NVTGCTFHGNQATDGGAIYSTAGYDMVVNSSFSGNFAHVQGGALLHSGVLVAMTHSSFESNRAGEVGLAVMSLGHAENIADVLFRNNSFFCGSGEYGFD---DGGEGADTCRIEVVCSRCNFKCKKVPGNIAL-DENTVPVCKDVPTGVNKDKEG-MAVDTLDLLNGYYRTSNQSQDVLECYK*NACIGGSNARNYCAQGYAGPYCAVCEERFTARFQYNCSICQGYEKWAAVCGAAVVLIVALXXXXXXXVYLVRIEDRPVSEGSGGWEGLLWDLRNMVVRAIPLTAIKIVVVTWQIITQISSVMSVDYPTVYESFLAALSVVNLNLGSILSLSCVVETNFYERLVLTTIGPIVMLGALAIIYRFAVIRNRHSTRAMKAVKNKHLSSA----------------------------------------------------------PEGPNAVDS-------------------------------AKDLWAPYKHNCYYYEVVECVRRVVLAGLAVFIYPGSSAQIAIEALFAVMFYAVFEIISPFANPFDMWLYRSGACTIYLSMYLALLLKVDAAGEESVSQTIFAGLLIAAHGGMALVLVIYVFLSV 1560
N T C F GN A DGGA+YS AGYD + + F N A GGA LHSGVLV + S+F NRA + GLAV SLG A NI D F +N+++C SG+YG++ E + TCR VVCS C C+ PG++ + ++ VP+C+ TGV+ +G + + L+LL GYYRTS +SQ+VL+CY+ ACIGG++ YC +GY G YCAVC+E + + +Q++CSIC G +A+ + + VAL LVR+ D + + W L R+ +V+A+PLT+IKIVVV WQI+TQ SSV++V YP +YESFLA L+VVN +LG +LS+SC+V+ NFY RL TT+GP+V+ G LA Y + RNRHS M+A K+KHLS A P G V S +DLW+ YK YY+EV+EC RR+ L GLA F+ P S+AQ+AIE + A +F AV +++SPFA+PFD WLYR+GA I+ SMYLALLLKVDA+ E+S SQ FA +LIAAH GM LV+++ LSV
Sbjct: 452 NATMCVFQGNSAVDGGAMYSAAGYDGIKDCRFEDNLAVGSGGAYLHSGVLVELDRSTFVGNRARDAGLAVQSLGIAGNITDTTFESNTYYCSSGQYGYEYEIGEDEVSGTCRFGVVCSSCAASCEDNPGSVVVVNDAHVPICETAMTGVDTSGDGGVTLPELNLLRGYYRTSAESQNVLKCYQEEACIGGTDVSQYCQEGYRGAYCAVCDEGYASGYQFSCSICDGENLRSAIGTSVALFFVALVGIALVIADLVRVVDEVEPDTASTWGKRLTSCRDRIVKAVPLTSIKIVVVAWQIVTQFSSVVNVVYPDIYESFLAVLNVVNFDLGFLLSVSCIVDVNFYGRLFFTTVGPLVVFGGLAATYAISRSRNRHSPAGMQAAKSKHLSIALFISFVVYSSVSFNIFQTFVCETLDDGVTYLRADYSLTCSTGVHTAMMAYAGLMILVYPVGIPTVYSWWLLSNRHDLVKVGTSGNCLGGAPRLDHLQPMRDLWSSYKPRRYYFEVLECGRRIALTGLAAFLLPDSAAQVAIEVVLAAIFMAVSDVLSPFADPFDGWLYRTGAWIIFFSMYLALLLKVDASDEDSQSQAAFAKVLIAAHVGMVLVVLVQAVLSV 1063
BLAST of mRNA_H-elongata_contig55089.12912.1 vs. uniprot
Match: D7FWD7_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWD7_ECTSI) HSP 1 Score: 352 bits (902), Expect = 3.330e-109 Identity = 207/488 (42.42%), Postives = 288/488 (59.02%), Query Frame = 1
Query: 115 AHVQGGALLHSGVLVAMTHSSFESNRAGEVGLAVMSLGHAENIADVLFRNNSFFCGSGEYGFDDGGEGADTCRIEVVCSRCNFKCKKVPGNIALDENTVPVCKDVPTGVNKDKEGMAVDTLDLLNGYYRTSNQSQDVLECYK*NACIGGSNARNYCAQGYAGPYCAVCEERFTARFQYNCSICQGYEKWAAVCGAAVVLIVALXXXXXXXVYLVRIEDRPVS-EGSGGWEGLLWDLRNMVVRAIPLTAIKIVVVTWQIITQISSVMSVDYPTVYESFLAALSVVNLNLGSILSLSCVVETNFYERLVLTTIGPIVMLGALAIIYRFAVIRNRHSTRAMKAVKNKHLSSAPEG-----PNAVDSAKDLWAPYKHNCYYYEVVECVRRVVLAGLAVFIYPGSSAQIAIEALFAVMFYAVFEIISPFANPFDMWLYRSGACTIYLSMYLALLLKVDAAGEESVSQTIFAGLLIAAHGGMALVLVIYVFLSV 1560
A + GG + H+G L M + F SN AG+ G AV S+G + +V F +N+ C GEY +D E D+CR E+ C+RC+ C +P ++ + ++T+PVC ++ G G V TLDL GYYRTS +SQ V+ECY AC GG++ NYCA GY GPYC+VC + + Y C C G +AV AA XXX LVR+ D S + + +G L + VV A PLT +KIVVV WQIITQ ++ YP Y+ FL L+ VNL++G ILS SC V T+F++RL++ TIGP+V+L LA+ + RN +S A++A+ +H + PN + DLW YK + YYYE++E VRR++L G+AVF+ PGSSAQIA+ L AV+F + E +SPFA DM LYR G I SMY+ALLLKV+ + E S + + F +LI A+ M + +V+ FL V
Sbjct: 225 AEISGGTIFHTGYL-GMIETVFASNEAGQDGTAVFSIGVVQQALNVTFASNTLNCPLGEYAYDKEAED-DSCRFELACARCSADCDAIPSSVTMADSTIPVCLELMEGTKASSSGTTVATLDLQEGYYRTSAESQVVVECYLTGACAGGTDPENYCADGYEGPYCSVCADGYAPGTAYQCHECSGTSMGSAVGLAAXXXXXXXXXXAVVATDLVRVVDGDRSIKDARTLKGRLSRFQAFVVNAFPLTTVKIVVVAWQIITQFGAIAGFVYPEEYQDFLNVLTPVNLDIGFILSYSCFVTTDFFDRLLIATIGPVVVLALLALTFVVGRKRNINSEAAVRALDLRHAKDLQKADRDRLPN-LQPLGDLWEAYKPSRYYYEIIEYVRRIMLTGVAVFVLPGSSAQIAVVLLLAVVFLFISESLSPFAKKIDMALYRWGNGVILASMYVALLLKVNVSEEGSETLSAFVVVLILANVFMVITVVVQSFLLV 709
BLAST of mRNA_H-elongata_contig55089.12912.1 vs. uniprot
Match: A0A6H5JSF5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSF5_9PHAE) HSP 1 Score: 348 bits (894), Expect = 1.010e-105 Identity = 232/619 (37.48%), Postives = 315/619 (50.89%), Query Frame = 1
Query: 19 CTFHGNQATDGGAIY--STAGYDMVVNSSFSGNFA---------------------HVQGGALLHSGVLVAMTHSSFESNRAGEVGLAVMSLGHAENIADVLFRNNSFFCGSGEYGFDDGGEGADTCRIEVVCSRCNFKCKKVPGNIALDENTVPVCKDVPTGVNKDKEGMAVDTLDLLNGYYRTSNQSQDVLECYK*NACIGGSNARNYCAQGYAGPYCAVCEERFTARFQYNCSICQGYEKWAAVCGAAVVLIVALXXXXXXXVYLVRIEDRPVS-EGSGGWEGLLWDLRNMVVRAIPLTAIKIVVVTWQIITQISSVMSVDYPTVYESFLAALSVVNLNLGSILSLSCVVETNFYERLVLTTIGPIVMLGALAIIYRFAVIRNRHSTRAMKAVKNKHLSSA-----------------------------------------PE---------------------------GPNAVDSAK-------------DLWAPYKHNCYYYEVVECVRRVVLAGLAVFIYPGSSAQIAIEALFAVMFYAVFEIISPFANPFDMWLYRSGACTIYLSMYLALLLKVDAAGEESVSQTIFAGLLIAAHGGMALVLVIYVFLSV 1560
CTF N A DGGA+Y + G ++V N +F GN A + GG + H+G L M + F SN AG+ G AV S+G + +V F +N+ C GE +D E D+CR E+ C+RC+ C +P ++ + ++T+PVC + G G V TLDL GYYRTS +SQ V+ECY +AC GG++ +NYCA GY GPYC+VC + + Y C C G +AV A XXX LVR+ D S + + +G L VV A PLT +KIVVV WQIITQ ++ YP Y+ FL AL+ VNL++G ILS SCVV T+F++RL++ TIGP+V+L LA+ + RN S A++AVKNKHLS+A P G N D K DLW YK + YYYE++E VRR+VL G+AVF+ PGSSAQ+A+ L AV+F + E +SPF DM LYR G + S+Y+ALLLKV+ + E S + + F +LI A+ MA+ LV+ FL V
Sbjct: 411 CTFDSNSAVDGGALYMSTNGGMEVVRNCNFYGNRAGESIERKASRTDDVQAALQRVEISGGTIFHTGHL-GMIETVFASNEAGQDGTAVFSMGVVQKALNVAFASNTLNCPPGENAYDKEAED-DSCRFELACARCSADCDAIPSSVTMADSTIPVCVESMEGTKASSSGTTVATLDLQEGYYRTSAESQVVVECYLTSACAGGTDPKNYCADGYEGPYCSVCADGYAPGTAYQCHECSGTSMGSAVGVAXXXXXXXXXXXAVVAADLVRVVDGDDSIKDARTLKGRLSRFHAFVVTAFPLTTVKIVVVAWQIITQFGAIAGFVYPEEYQDFLNALTPVNLDIGFILSYSCVVITDFFDRLLIATIGPVVVLALLALTFVVGRKRNIDSEAAVRAVKNKHLSAALFVMFFIYSSVSFTVFQTFVCDTLDDGVSYLRADYSLTCDTPRYGAFRGYAAVMVCVYPIGIPATFAWLLGSNRQDLQKADRDRLANLQPLGDLWEAYKPSRYYYEIIEYVRRIVLTGVAVFVLPGSSAQMAVVLLLAVVFLFISESLSPFTKKIDMALYRWGNGVVLASIYVALLLKVNVSEEGSETLSAFVVVLILANVCMAITLVVQSFLLV 1027
BLAST of mRNA_H-elongata_contig55089.12912.1 vs. uniprot
Match: D7FTT9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTT9_ECTSI) HSP 1 Score: 345 bits (885), Expect = 2.000e-101 Identity = 217/604 (35.93%), Postives = 288/604 (47.68%), Query Frame = 1
Query: 1 PANVTGCTFHGNQAT-DGGAIYSTAGYDMVVNSSFSGNFAHVQGGALLHSGVLVAMTHSSFESNRAGEVGLAVMSLGHAENIADVLFRNNSFFCGSGEYGFD-----DGGEGADTCRIEVVCSRCNFKCKKVPGNIA--LDENTVPVCKDVPTGVNKDKEGMAVDTLDLLNGYYRTSNQSQDVLECYK*NACIGGSNARNYCAQGYAGPYCAVCEERFTARFQYNCSICQGYEKWAAVCGAAVVLIVALXXXXXXXVYLVRIED--RPVSEGSGGWEGLLWDLRNMVVRAIPLTAIKIVVVTWQIITQISSVMSVDYPTVYESFLAALSVVNLNLGSILSLSCVVETNFYERLVLTTIGPIVMLGALAIIYRFAVIRNRHSTRAMKAVKNKHLS-----------------------------------------SAP----------------------------------------EGPNAVDSAKDLWAPYKHNCYYYEVVECVRRVVLAGLAVFIYPGSSAQIAIEALFAVMFYAVFEIISPFANPFDMWLYRSGACTIYLSMYLALLLKVDAAGEESVSQTIFAGLLIAAHGGMALVLV 1539
P C F N A DGGA+YS A +DM+ S F N +N F+C GE+G + D GAD CR VCSRC +C + A +D T+P C++ P G + G + TL++L G+YR+S S D+ EC+ AC GGS YCA+GY GPYCAVC ++ + C C G K +A+ AA + +AL LV + + P +GS GW + V + +PLTA+KIVVV WQI+TQ S V V+YP Y+ FL+ + VVNL+LG ILS +CV +TNFY+RL++ TIGP+++LG L Y A RNRH AM+ V+ +HLS P E + A DLW PYK + YYYEVVEC RR+ L G AVFIYP SSAQ+AI L A +F V EI+SPFA P +MWLYR+G ++ SMYLALLL+VD + E SQ +F+G+++ AH M LV+V
Sbjct: 425 PVKFLDCLFESNDALEDGGALYSVASFDMIRGSKFFQNRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDNDFYCEEGEFGTETLIDKDLFGGADQCRFGRVCSRCASECDSELESAAELVDAETLPTCEEAPEGSRTTRRGATLATLEILPGFYRSSETSTDIRECFHKQACEGGSAVGTYCAEGYIGPYCAVCSAGYSPGYSRTCKSCMGDSKKSALVFAAAIGALALAAVVALVSRLVSVVEVGPPQQQGSKGWRRTCSAWQARVRQTVPLTAVKIVVVVWQIVTQYSDVAGVEYPGAYQDFLSVVDVVNLDLGFILSFACVYDTNFYDRLLMATIGPVLVLGLLGCTYLVARRRNRHCEEAMRDVQRRHLSVTLFVMFVIYAAVSYTIFETFVCDTLDDGNSYLRADYSLTCDTPLHTAYRVYAGLAVLVYPVGIPCVFGWWLFKNRHELKQEDRESQAELRPAADLWEPYKPSAYYYEVVECFRRIALTGFAVFIYPDSSAQVAIVLLLAAVFMVVSEILSPFARPVEMWLYRAGHYVVFASMYLALLLRVDVSDERDQSQEVFSGVIVIAHVAMFLVVV 1028
BLAST of mRNA_H-elongata_contig55089.12912.1 vs. uniprot
Match: A0A6H5L324_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L324_9PHAE) HSP 1 Score: 340 bits (872), Expect = 1.070e-99 Identity = 214/604 (35.43%), Postives = 289/604 (47.85%), Query Frame = 1
Query: 19 CTFHGNQAT-DGGAIYSTAGYDMVVNSSFSGNFAHVQGGALLHSGVLVAMTHSSFESNRAGEVGLAVMSLGHAENIADVLFRNNSFFCGSGEYGFD-----DGGEGADTCRIEVVCSRCNFKCKKVPGNIA--LDENTVPVCKDVPTGVNKDKEGMAVDTLDLLNGYYRTSNQSQDVLECYK*NACIGGSNARNYCAQGYAGPYCAVCEERFTARFQYNCSICQGYEKWAAVCGAAVVLIVALXXXXXXXVYLVRI-------EDRPVSEGSGGWEGLLWDLRNMVVRAIPLTAIKIVVVTWQIITQISSVMSVDYPTVYESFLAALSVVNLNLGSILSLSCVVETNFYERLVLTTIGPIVMLGALAIIYRFAVIRNRHSTRAMKAVKNKHLS-----------------------------------------SAP----------------------------------------EGPNAVDSAKDLWAPYKHNCYYYEVVECVRRVVLAGLAVFIYPGSSAQIAIEALFAVMFYAVFEIISPFANPFDMWLYRSGACTIYLSMYLALLLKVDAAGEESVSQTIFAGLLIAAHGGMALVLVI 1542
C F N A+ DGGA+YS A +D++ S+FS N F+C GE+G + D GAD CR VCSRC +C A +D +T+P C+ P G + G + TL++L G+YR+S S D+ EC+ AC GGS YC++GY GPYCAVC ++ + C C G K +A+ AA + ++AL LV + + GS GW L+ V + +PLTA+KIVVV WQI+TQ S V ++YP Y+ FL+ + VVNL+LG ILS +CV +TNFY+RL++ TIGP+++LG L Y A RNRH AM+ V+ +HLS P EG + A DLW PYK + YYYEVVEC RR+ L G AVFIYP SSAQ+AI L A +F V EI+SPFA P +MWLYR+G ++ SMYLALLL+VD + E SQ +F+G+++ AH M LV+V+
Sbjct: 407 CLFESNGASEDGGALYSVASFDVIRGSNFSHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNDFYCEEGEFGTETLIDKDLFGGADQCRFRRVCSRCASECGSELERTAELVDADTLPTCETAPEGSRTTRRGATLATLEVLPGFYRSSETSTDIRECFHKKACDGGSAIGTYCSEGYIGPYCAVCAAGYSPGYSRTCKSCMGNSKKSALVFAAAIGLLALAAVMVLVSRLVSVVEVGPRQQXXXXXXGSKGWRRTCSALQARVRQTVPLTAVKIVVVVWQIVTQYSDVAGIEYPGAYQDFLSVVDVVNLDLGFILSFACVYDTNFYDRLLMATIGPVLVLGLLGCTYVVARRRNRHCEEAMRDVQRRHLSVTLFVMFVIYAAVSYTIFETFVCDTLDDGNSYLRADYSLTCDTPLHTAYRVYAGLAVLVYPVGIPCIFGWWLFKNRHELKQEDREGQAELRPAADLWEPYKPSAYYYEVVECFRRIALTGFAVFIYPDSSAQVAIVLLLAAVFMVVSEILSPFARPVEMWLYRAGHYVVFASMYLALLLRVDVSDERDQSQEVFSGVIVMAHVAMFLVVVV 1010
BLAST of mRNA_H-elongata_contig55089.12912.1 vs. uniprot
Match: D7FTU5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTU5_ECTSI) HSP 1 Score: 323 bits (829), Expect = 5.320e-94 Identity = 209/590 (35.42%), Postives = 286/590 (48.47%), Query Frame = 1
Query: 1 PANVTGCTFHGNQAT-DGGAIYSTAGYDMVVNSSFSGNFAHVQGGALLHSGVLVAMTHSSFESNRAGEVGLAVMSLGHAENIADVLFRNNSFFCGSGEYGFDDGGEGADTCRIEVVCSRCNFKC-KKVPGNIAL-DENTVPVCKDVPTGVNKDKEGMAVDTLDLLNGYYRTSNQSQDVLECYK*NACIGGSNARNYCAQGYAGPYCAVCEERFTARFQYNCSICQGYEKWAAVCGAAVVLIVALXXXXXXXVYLVRI-EDRPVSEGSGGWEGL--LWDLRNMVVRAIPLTAIKIVVVTWQIITQISSVMSVDYPTVYESFLAALSVVNLNLGSILSLSCVVETNFYERLVLTTIGPIVMLGALAIIY-RFAVIRNRHSTRAMKAV-------------------------------------------------------------------KNKH--LSSAPEGPNAVDSAKDLWAPYKHNCYYYEVVECVRRVVLAGLAVFIYPGSSAQIAIEALFAVMFYAVFEIISPFANPFDMWLYRSGACTIYLSMYLALLLKVDAAGEESVSQTIFAGLLIAAHGGMALVLVI 1542
P C F N A+ DGGAIYS AG+DMV +S SF+C G + + EG D CR +VCSRC +C ++ + + D + +P C+ VP G G + TL++L GYYR+S S D+ EC+ +AC GG YCA GY GPYCAVC F+ + ++C C G + A + V ++ L LV + E P S+ W+ +W R + + +PLTAIKIVVV WQI+TQ S V V+YP Y+ FL+ + VVNL+LG ILSL+CV +T+FY+RL+LTTI P V+LG L Y V+++RH + A+ + K++H E + A DLW PYK + YYYEVVEC RR+ L G AVFIYP SSAQ+AI L A++F V E +SPFA P +MWLYR+G ++ SMYLALLL+VD + E + SQ +F+G+L+ AH M LV+V+
Sbjct: 436 PTKFLSCVFEENHASEDGGAIYSVAGFDMVKDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFYCEEGTFSTEVEIEGEDVCRFGLVCSRCASECASELEDEVTVADPDLLPACEAVPEGAQTTSRGGTLATLEILPGYYRSSATSTDIRECFYEDACEGGKVVGEYCAAGYTGPYCAVCTAGFSPGYFHSCKSCMGDSRRRAFYVVSAVGVLVLLAVVFMAAKLVSVVETTPSSKAPSRWQQKRSVWQAR--MKKILPLTAIKIVVVVWQIVTQYSDVAGVEYPGAYKDFLSVVDVVNLDLGFILSLACVCDTDFYDRLLLTTICPAVVLGLLGCTYLAMGVVKHRHLSVALFIMFVIYATVSYTIFETFVCDPLDDGNSYLRSDYSLTCDTETHTAYRVYAGLMILVYPVGIPCVFGWWLFKHRHELKQEGRERRAVLKPAADLWEPYKPSTYYYEVVECFRRIALTGFAVFIYPDSSAQVAIVLLLAIVFMVVSEFLSPFARPVEMWLYRTGHYVVFASMYLALLLRVDVSDERNQSQEVFSGVLVIAHAAMLLVVVL 1023
BLAST of mRNA_H-elongata_contig55089.12912.1 vs. uniprot
Match: A0A6H5JWT9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWT9_9PHAE) HSP 1 Score: 287 bits (735), Expect = 3.100e-82 Identity = 200/604 (33.11%), Postives = 301/604 (49.83%), Query Frame = 1
Query: 1 PANVTGCTFHGNQATD-GGAIYSTAGYDMVVNSSFSGNFAHVQGGALLHSGVLVAMTHSSFESNRAGEVGLAVMSLGHAENIADVLFRNNSFFCGSGEYGFDDGGEGADTCRIEVVCSRC--NFKCKKVPGNIALDENTVPVCKDVPTGVNKDKEGMAVDTLDLLNGYYRTSNQSQDVLECYK*NACIGG-SNARNYCAQGYAGPYCAVCEERFTARFQYNCSICQGYEKWAAVCGAAVVLIVALXXXXXXXVYLVRIEDRPVSEGSGGWEGLLWDLRNMVVRAIPLTAIKIVVVTWQIITQISSVMSVDYPTVYESFLAALSVVNLNLGSILSLSCVVETN--FYERLVLTTIGPIVMLGALAIIYRFAVIRNRH----STRAMKAVKNKHLSSA----------------------------------------------------------PEG------------------PNA----VDSAKDLWAPYKHNCYYYEVVECVRRVVLAGLAVFIYPGSSAQIAIEALFAVMFYAVFEIISPFANPFDMWLYRSGACTIYLSMYLALLLKVDAAGEESVSQTIFAGLLIAAHGGMALVLVI 1542
PA+ GC F N AT+ GG + S G + V+S F N+A V G L G + +F +N A GLA+ ++G NI+D LF N+FFC +GE+ + E D+ R + VC C +C A T V D ++ G++++TL + GY+R SN S +L CY AC+GG + N C GY GPYCAVCE + + + C+ C + V AA+ ++ XXXXXX +L+ E VSE S L + +PL + KI++V WQI+TQ +S ++ +P VY+ F+ AL VVN +LGS+++ C + N F++RL+++T+GP++++G LA Y A RN S ++A+++KHLS+ P G P A S DLW PY+ +YYEV+EC RRV+L G+ VFIYP ++AQ+A+ L A F V+E+++P+ + DMWL R G ++LSM+ LLLKVD + E + SQ +FAG+++A H M L +++
Sbjct: 540 PASFVGCRFMSNAATETGGGVESAFGQENFVSSHFQDNYADV--GGALQLGGKTNVDGCAFVANSASSRGLAIAAVGFV-NISDTLFEGNTFFCQAGEFVENKEQEEGDSGRYDTVCFDCPERSECYSCSVQEAAGRPTCSVALD---NTVSEEAGVSLETLSMSRGYWRASNSSLIILACYNPEACLGGQTGVDNSCDNGYQGPYCAVCESGYASSLAHTCTQCSSSRRNGFVVAAAIAVVXXXXXXXXXCAHLISGE---VSEQSC--------LHRRLSAMLPLQSFKIIIVVWQILTQFASAANISFPDVYQDFINALDVVNFDLGSLVASGCWADINVDFHDRLLVSTLGPLLVVGGLASTYAVAQRRNSSASGGSQAGVEAIRHKHLSAFLLVTFLVYSSVSATVFQMFACDKLDDGHTYLRADYRILCTSAKHEALQVYAAFMIALYPVGIPLLYAYLLHHRRDVLMDPTADKASAQSTADLWEPYRPERFYYEVIECGRRVLLTGVVVFIYPNTAAQVAVTILIAFFFLMVYEMLAPYRSDSDMWLSRGGHVIVFLSMFDVLLLKVDVSDERTESQRVFAGVIVAGHCLMFLAVIV 1126
BLAST of mRNA_H-elongata_contig55089.12912.1 vs. uniprot
Match: A0A6H5K0E9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0E9_9PHAE) HSP 1 Score: 286 bits (731), Expect = 4.700e-81 Identity = 201/596 (33.72%), Postives = 285/596 (47.82%), Query Frame = 1
Query: 1 PANVTGCTFHGNQA-TDGGAIYSTAGYDMVVNSSFSGNFAHVQGGALLHSGVLVAMTHSSFESNRAGE-VGLAVMSLGHAENIADVLFRNNSFFCGSGEYGFDDGGEGADTCRIEVVCSRCNFKCKKVPGNIALDENTVPVCKDVPTGVNKDKEGMAVDTLDLLNGYYRTSNQSQDVLECYK*NACIGG-SNARNYCAQGYAGPYCAVCEERFTARFQYNCSICQGYEKWAAVCGAAVVLIVALXXXXXXXVYLVRIEDRPVSEGSGGWEGLLWDLRNMVVRAIPLTAIKIVVVTWQIITQISSVMSVDYPTVYESFLAALSVVNLNLGSILSLSCVVETNFYERLVLTTIGPIVMLGALAIIYRFAVIRNRHSTRAMKAVKNKHL-------------------------------------------SSAPEG----------------------------------------PNAVDSAKDLWAPYKHNCYYYEVVECVRRVVLAGLAVFIYPGSSAQIAIEALFAVMFYAVFEIISPFANPFDMWLYRSGACTIYLSMYLALLLKVDAAGEESVSQTIFAGLLIAAHGGMAL 1530
P C F GNQA + GGAI S AG D + NS F GN A GGAL +G +++ SF N + E G AV ++G +I + F N F C +G + G E +C+ C C G + + + P+C +V D + + TL + G++R S S +VL CY +AC+GG + A YC +GY GPYC +C + +T + + CS C E A G AV +++AL + + V G G G++ +V R IPL ++KIV+V+WQI+TQ +SV +V YP VY+ L L V N +L +LS CVV+ NF+ RL+++TI PIV L LA Y A NR + + NKH+ SS G P V S +LW PYK +YYEV+EC RRV+LAG+ VFIYP ++AQIA+ L A F + E ++P+A+ +D W+ R G ++LSMY+ALLLKVD + E + SQ +F +L+A H M L
Sbjct: 903 PTTFDTCQFIGNQAISTGGAINSAAGEDAIENSVFEGNSAGT-GGALRLAGEAY-ISNCSFRENTSDEGEGAAVSNIGFISSITNASFDGNGFDCPAGTFRNVTG----SVDHFEAICNGCETTCD---GCVFAEGSLAPICTEVMDHSTSDGGNVTLQTLSIDRGFWRASTSSTEVLACYHADACLGGVTGASGYCEEGYEGPYCGICSDGYTEQLSFACSKCS--ENSAG--GIAVAVVLALLIVFLAVAVVSYVTSGEVGMGRKG--GIV----ELVTRYIPLQSLKIVIVSWQILTQFTSVANVTYPDVYQDLLDVLDVFNFDLSWLLSAGCVVDMNFHGRLLVSTISPIVALLLLACTYAAAARINRGEPEKLNIIWNKHVTVVLLLTFFVYSSVSSTLFRAFACDDLDYSKDYLRADYSIECNSSEHRGIQVYAGFMIVIYTVGIPALYAELLFKSRDVLKDEDPDREEPPRVKSISNLWEPYKPAVFYYEVIECFRRVLLAGVVVFIYPNTAAQIAVTLLIAFAFALLSEGLAPYASRWDTWISRVGHIVVFLSMYVALLLKVDVSDERASSQEVFESVLVAVHVCMIL 1479
BLAST of mRNA_H-elongata_contig55089.12912.1 vs. uniprot
Match: D7G301_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G301_ECTSI) HSP 1 Score: 276 bits (706), Expect = 5.260e-78 Identity = 197/599 (32.89%), Postives = 284/599 (47.41%), Query Frame = 1
Query: 1 PANVTGCTFHGNQAT-DGGAIYSTAGYDMVVNSSFSGNFAHVQGGALLHSGVLVAMTHSSFESNRAGEVGLAVMSLGHAENIADVLFRNNSFFCGSGEYGFDDGGEGADTCRIEVVCSRCNFKCKKVPGNIALDENTVPVCKDVPTGVNKDKEGMAVDTLDLLNGYYRTSNQSQDVLECYK*NACIGGSNAR-NYCAQGYAGPYCAVCEERFTARFQYNCSICQGYEKWAAVCGAAVVLIVALXXXXXXXVYLVRIEDRPVSEGSGGWEGLLWDLRNMVV----RAIPLTAIKIVVVTWQIITQISSVMSVDYPTVYESFLAALSVVNLNLGSILSLSCVVETNFYERLVLTTIGPIVMLGALAIIYRFAVIRNRHSTRAMKAVKNKHLS------------------------SAPEGPNAV--------DSAK---------------------------------------------------DLWAPYKHNCYYYEVVECVRRVVLAGLAVFIYPGSSAQIAIEALFAVMFYAVFEIISPFANPFDMWLYRSGACTIYLSMYLALLLKVDAAGEESVSQTIFAGLLIAAHGGMAL 1530
P C F N+AT GGAI S AG D VNS+F GN A GG L +G T S ++ + G AV ++G ++ ++ F N F C G Y D G E C C C + P C DV + + ++ L + GY+R S S++V CY +AC+GG R YC +GY GPYCAVC + +T + C+ C G A+ AAV+ +V L Y + G + D+R+ VV + IPL ++KIV+V WQI+TQ +SV +V YP VY+ FL L V N +L +LS C+ + +F++RL+ +T+ P++ L LA Y AV NR +++ + NKH+S +G N + DS+K DLW PYK + +YYEV+EC RRV+LAG+ VFI+P ++AQIAI + A F V E ++PFA+ +D WL R+G +++SMY+ALLLKVD +GE + SQ ++ +L+AAH M L
Sbjct: 650 PTTFDHCHFIDNRATATGGAIDSAAGQDAFVNSTFQGNRAGTGGGLRL-AGTASLDTCSFVDNISDDQGGAAVSNIGSLLSVENITFSGNVFDCDPGMY-LDYNASGNP---YEAACGGCETACD----GCFFEPPVPPTCTDVMEHITSAGGTVTLEDLPVERGYWRASPSSEEVFACYNSDACLGGVTGRAGYCLKGYEGPYCAVCSDGYTTELAFACTRCSGGAGRIAL--AAVLAVVVLCVAFAVASYAMS--------------GRVGDVRSGVVARLGQYIPLQSVKIVIVAWQILTQFTSVANVTYPDVYKRFLDGLDVFNFDLSWVLSAGCIFDIDFHDRLLASTVSPVIGLLFLAGTYAAAVSMNRGKAESLQVIWNKHVSLVLLLTFLIYSSVSATLFKAFVCEELEDGTNYLRADYTIDCDSSKHKAFQVYAGFMVVVYVVGIPALYAFLLFRDRHVLKDHHADREQTARTTSTSDLWKPYKPSVFYYEVIECGRRVLLAGVVVFIFPNTAAQIAITLMMAFAFVMVSEGLAPFASKWDAWLNRTGHTVVFVSMYIALLLKVDVSGERAGSQRVYEIVLVAAHACMIL 1223
BLAST of mRNA_H-elongata_contig55089.12912.1 vs. uniprot
Match: D7G2Z8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Z8_ECTSI) HSP 1 Score: 271 bits (694), Expect = 4.250e-77 Identity = 191/591 (32.32%), Postives = 283/591 (47.88%), Query Frame = 1
Query: 1 PANVTGCTFHGNQA-TDGGAIYSTAGYDMVVNSSFSGNFAHVQGGALLHSGVLVAMTHSSFESNRAGEVGLAVMSLGHAENIADVLFRNNSFFCGSGEY-GFDDGGEGADTCRIEVVCSRCNFKCKKVPGNIALDENTVPVCKDVPTGVNKDKEGMAVDTLDLLNGYYRTSNQSQDVLECYK*NACIGG-SNARNYCAQGYAGPYCAVCEERFTARFQYNCSICQGYEKWAAVCGAAVVLIVALXXXXXXXVYLVRIEDRPVSEGSGGWEGLLWDLRNMVVRAIPLTAIKIVVVTWQIITQISSVMSVDYPTVYESFLAALSVVNLNLGSILSLSCVVETNFYERLVLTTIGPIVMLGALAIIYRFAVIRNRHSTRAMKAVKNKHLS------------------------SAPEGPNAV--------DSAK---------------------------------------------------DLWAPYKHNCYYYEVVECVRRVVLAGLAVFIYPGSSAQIAIEALFAVMFYAVFEIISPFANPFDMWLYRSGACTIYLSMYLALLLKVDAAGEESVSQTIFAGLLIAAH 1515
P C F N+A GGA+ + AG D VNS F GN A GGAL +G S E+ G AV ++G +++++ F N + C G + ++ G E +C C +C+ G + VP C D N + +D L + GY+R + S++VLECY +AC+GG + + +YC +GY GPYCAVC +TAR CS C ++ ++ V + L Y V SG EG + R +PL ++KIV+V WQI+TQ +SV ++ +P VY+ FL AL + N +LG +LS CV + +F++RL+++TI PIV L LA +Y A + S+ ++ V +KH+S + N + DS K DLW PY+ + +YYEV+EC RRV+LAG+ VFIYP ++AQIA+ L AV+F + E ++P+A+ +D WL R G + +SMY+ALLLKVD + E + SQ +F LL+AAH
Sbjct: 370 PTTFEQCRFTSNRAIATGGAVDTAAGQDKFVNSVFEGNTAGT-GGALRLAGTAEVNNCSFVENVSDDGGGAAVSNIGFVSSVSNLSFSRNVYGCQEGMFLECEESGT-----LYEAICDGCPVECE---GCSFEEPQLVPKCSDALEHSNSSGGTVTLDALVIEPGYWRATPSSENVLECYNADACLGGVTGSESYCLEGYEGPYCAVCSGGYTARLGMACSKCS--DRAGSIALGVSVSVAGLLFTVALVSYAV----------SGESEGRARGVVERTGRFVPLQSVKIVIVAWQILTQFTSVANIRFPHVYQRFLDALELFNFDLGWVLSAGCVFDVDFHDRLLVSTIAPIVGLLFLAAVYAAAARNSHRSSEDLQRVWHKHVSLVLLLTFLVYASVSAVLFQTFACEELDDRKNYLRADYRIECDSPKHSAFQVYAGFMIVLYTVGIPALYGGFLFRDSDVLRRDEADREQLARIAPTADLWKPYRPSVFYYEVIECARRVLLAGVVVFIYPNTAAQIAVALLIAVVFAMISEALAPYASRWDTWLCRMGHAVVAVSMYVALLLKVDVSDERASSQRVFESLLVAAH 939 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig55089.12912.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig55089.12912.1 >prot_H-elongata_contig55089.12912.1 ID=prot_H-elongata_contig55089.12912.1|Name=mRNA_H-elongata_contig55089.12912.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=154bp MVVNSSFSGNFAHVQGGALLHSGVLVAMTHSSFESNRAGEVGLAVMSLGHback to top mRNA from alignment at H-elongata_contig55089:633..3612- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig55089.12912.1 ID=mRNA_H-elongata_contig55089.12912.1|Name=mRNA_H-elongata_contig55089.12912.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2980bp|location=Sequence derived from alignment at H-elongata_contig55089:633..3612- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig55089:633..3612- >mRNA_H-elongata_contig55089.12912.1 ID=mRNA_H-elongata_contig55089.12912.1|Name=mRNA_H-elongata_contig55089.12912.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=924bp|location=Sequence derived from alignment at H-elongata_contig55089:633..3612- (Himanthalia elongata Himel1 dioecious)back to top |