mRNA_H-elongata_contig54930.12890.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig54930.12890.1 vs. uniprot
Match: A0A6H5J907_9PHAE (G domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J907_9PHAE) HSP 1 Score: 570 bits (1470), Expect = 4.710e-196 Identity = 310/459 (67.54%), Postives = 357/459 (77.78%), Query Frame = 1
Query: 1 MPYGKSKPRRGQESLGRAIHRRRAQERIVDESNSSYDVDGSKARGKLTSVLEASNLDDFIASAMMSERAFESHRESTVIVGPDGVEMTLDDDGMVRMGE-EPQDAGNTEFDFEHMDLPRRPAWTTDMTAEELDALENKAFLEWRRGIASAEESKSGMKVTPFEKNLEVWRQLWRVVERSDLVCQLVDARNPLFYYSTDLEAYASELVPPRPTVVVVNKADYLSSYQQCEWARYFRDRSVTVLFFSARLQQEHLNRQAREGRDAAERSISPASSPDSTDSAGSNRFDSKDYQDSNVSSEEERGKEGGNERVQQEKIDHDDFFRPEGSPSTAGVGLHATRSAGMIPEYTG-RKGDGAIHLLDRLEMCAELERLARTLGAGPDPERTKRNGGRACIGMVGYPNVGKSSIINVLVGATPLSHGGVRVRVGATPGKTKHFQTLVLSDSLMLCDCPGLVFPSFVS 1371
MP+GKS P+RGQESLG+A+ RRRAQER S SSYDVDGSKARGK+TSVLEASNLDDFI+SAMMSERAFESH+E+TV++GPDG+EM+LD++G + +D G EFDFEHM++PRRPAW MTAE+LD E K+FLEWRRGIA+AEE MKVTPFEKNLEVWRQLWRV+ERSDLVCQLVDARNPLFYYSTDLEAYA E+VPP+PTVVVVNKADYLS QQ EWAR+F+ R +TVLFFSAR QQE LNR+ARE RD AE + S P ++D+ +DS+D +D + + E EG E ++ + AG G AT SAG T KGD ++ +L RLEMC ELERLARTLG PDP R NGGRAC+GMVG+PNVGKSS+INV+VGATPLSHGGVRV VGATPGKTKHFQTLVLSDSLMLCDCPGLVFPSFVS
Sbjct: 1 MPHGKSNPKRGQESLGKALQRRRAQERAAAASASSYDVDGSKARGKMTSVLEASNLDDFISSAMMSERAFESHKENTVVLGPDGLEMSLDENGEIDAAAGSGKDPGTDEFDFEHMNIPRRPAWAAGMTAEDLDYQERKSFLEWRRGIANAEEKNGDMKVTPFEKNLEVWRQLWRVIERSDLVCQLVDARNPLFYYSTDLEAYAREIVPPKPTVVVVNKADYLSRAQQREWARHFKGRGITVLFFSARQQQEQLNREAREERDIAEGGL--GSGPPASDA-----YDSEDGED-DTXXDFEADTEGDGEEEEEVALSDAPSAAGAAKKGHAGGGEGATSSAGRRGSGTDVGKGDKSLQVLSRLEMCVELERLARTLGT-PDPSR---NGGRACVGMVGFPNVGKSSLINVMVGATPLSHGGVRVSVGATPGKTKHFQTLVLSDSLMLCDCPGLVFPSFVS 447
BLAST of mRNA_H-elongata_contig54930.12890.1 vs. uniprot
Match: A0A835YPB7_9STRA (Lsg1, cytoplasmic GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPB7_9STRA) HSP 1 Score: 368 bits (944), Expect = 1.420e-116 Identity = 224/461 (48.59%), Postives = 279/461 (60.52%), Query Frame = 1
Query: 40 SLGRAIHRRRAQERIVDESNSSYDVDGSKARGKLTSVLEASNLDDFIASAMMSERAFESHRESTVIV-GPDGVEMTLD-DDGMVRMG-EEPQDAGNTEFDFEHMDLPRRPAWTTDMTAEELDALENKAFLEWRRGIASAEESKSGMKVTPFEKNLEVWRQLWRVVERSDLVCQLVDARNPLFYYSTDLEAYASELVPPRPTVVVVNKADYLSSYQQCEWARYFRDRSVTVLFFSARLQQEHLNRQAREGRDAAERSISPASSPDSTDSAGSNRFDSKDYQDSNVSSEEERGKEGGNERVQQEKIDHDDFFRPEGSPSTAGVG-------------LHATRSAGMIPEYTGRKGDGAIHLLDRLEMCAELERLARTLGAGPDPERTKRNGGRACIGMVGYPNVGKSSIINVLVGATPLSHGGV-RVRVGATPGKTKHFQTLVLSDSLMLCDCPGLVFPSFVS 1371
SLG+A+ RR+AQ+ +N+ +DVDGS RGK SVLEA++L+DFIASAM+SER FESH+ TVI+ G G ++ +D DD V + +E A F FE M +PRRP W M+AE+LD E AF+EWRR IA EE K+G+KVTPFEKN+EVWRQLWRV+E+SDLV Q+VDARNPLFYYS DL AYA EL PP+P +++VNK+DYL++ Q+ EWA +F + LFFSAR Q LNR+AR R + A++ D A + +G+ TAG G S R+ +L R E+ +E LAR+LGA +R+ GRAC+GMVGYPNVGKSS+IN L GATP SHG RV VGATPGKTKHFQTL LS SL+LCDCPGLVFPSFVS
Sbjct: 12 SLGKALQRRQAQQLAEKRANARFDVDGSVTRGKYVSVLEANSLEDFIASAMLSEREFESHKAHTVILDGATGEKLRIDADDTHVAVETDETAAAAAHVFGFEQMGVPRRPPWDAGMSAEDLDKAEKTAFIEWRREIARLEEEKAGLKVTPFEKNIEVWRQLWRVLEKSDLVVQIVDARNPLFYYSRDLLAYARELDPPKPVIILVNKSDYLTAAQRREWAAHFMRQGWQGLFFSARAAQVKLNREARIARGLEMATADDAAAED----ADAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSAPELQDGASETAGSGGSXXXXXXXXXXXXXXDESNSEFEREVARRA----RVLSREELLHVIEHLARSLGAASAARSAERHHGRACVGMVGYPNVGKSSVINALAGATPFSHGATARVSVGATPGKTKHFQTLALSPSLLLCDCPGLVFPSFVS 464
BLAST of mRNA_H-elongata_contig54930.12890.1 vs. uniprot
Match: G4YIC6_PHYSP (G domain-containing protein n=6 Tax=Phytophthora TaxID=4783 RepID=G4YIC6_PHYSP) HSP 1 Score: 279 bits (714), Expect = 4.600e-84 Identity = 173/425 (40.71%), Postives = 236/425 (55.53%), Query Frame = 1
Query: 115 DGSKARGKLTSVLEASNLDDFIASAMMSERAFESHRESTVIV-----GPDGVEMTLDDDGMVRMGEEPQDAGNTEFDFEHMDLPRRPAWTTDMTAEELDALENKAFLEWRRGIASAEESKSGMKVTPFEKNLEVWRQLWRVVERSDLVCQLVDARNPLFYYSTDLEAYASELVPPRPTVVVVNKADYLSSYQQCEWARYFRDRSVTVLFFSARLQQEHLNRQAREGRDAAERSISPASSPDSTDSAGSNRFDSKDYQDSNVSSEEERGKEGGNERVQQEKIDHDDFFRPEGSPSTAGVGLHATRSAGMIPEYTGRKGDGAIH-LLDRLEMCAELERLARTLGAGPDPERTKRNGGRACIGMVGYPNVGKSSIINVLVGATPLSHGGVRVRVGATPGKTKHFQTLVLSDSLMLCDCPGLVFPSFVS 1371
DG A L S LE S+LDDF+ASA+++ R F + +ES V++ GP +E + E F M +PRRP WTT TAEEL+ LE ++FLEWRR IA E S ++VTPFEKNLEVWRQLW V ERSD++ Q+VDARNPLFY STDL+AYA E PR T+++VNK+D+LS Q+ W +F+ ++ +FFSA+ Q+ ++ +A++ R A + E D D +P +PS ++ + K + + + +L R+E+ + ++A + G R K G GMVG+PNVGKSS+IN L+GA+ SH RV VGATPGKTKHFQT++LSD +MLCDCPGLVFPSFV+
Sbjct: 44 DGGDASVALASYLEGSSLDDFLASAVLANREFTAVKESIVLMEEADAGPQLIER--------------EKHVMPEMTFAEMKVPRRPQWTTSTTAEELNRLEKESFLEWRRDIALLEASSDHLEVTPFEKNLEVWRQLWHVRERSDIMVQIVDARNPLFYRSTDLDAYAKEGETPRRTLLIVNKSDFLSEGQRTAWGEHFKAENIDYVFFSAKEAQDEIDEEAKKLRQEARNA---------------------------------------------ESHDEYDEAKPADAPSQ------------VVDDSAPTKEERSPYPVLSRIELLEYVTKIATEV-LGEVGVRVKDKG-LIKFGMVGFPNVGKSSVINALLGASTYSHKTQRVAVGATPGKTKHFQTMILSDKIMLCDCPGLVFPSFVN 395
BLAST of mRNA_H-elongata_contig54930.12890.1 vs. uniprot
Match: A0A4D9D3A0_9STRA (G domain-containing protein n=2 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D3A0_9STRA) HSP 1 Score: 279 bits (714), Expect = 5.340e-83 Identity = 194/463 (41.90%), Postives = 248/463 (53.56%), Query Frame = 1
Query: 1 MPYGKSKPRRGQESLGRAIHRRRAQER-IVDESNSSYDVDGSKARGKLTSVLEASNLDDFIASAMMSERAFESHRESTVIV--GPDGVEMTLDDDGMVRMGEEPQDAGNTEFDFEHMDLPRRPAWTTDMTAEELDALENKAFLEWRRGIASAEE-SKSGMKVTPFEKNLEVWRQLWRVVERSDLVCQLVDARNPLFYYSTDLEAYASELVPPRPTVVVVNKADYLSSYQQCEWARYFRDRSVTVLFFSARLQQEHLNRQAREGRDAAERSISPASSPDSTDSAGSNRFDSKDYQDSNVSSEEERGKEGGNERVQQEKIDHDDFFRPEGSPSTAGVGLHATRSAGMIPEYTGRKGDGAIHLLDRLEMCAELERLARTLGAGPDPERTKRN--GGRACIGMVGYPNVGKSSIINVLVGATPLSHGGVRVRVGATPGKTKHFQTLVLSDSLMLCDCPGLVFPSFVS 1371
MP K G +GRA+ R+ Q+ ++ +DG K +L+SVLE ++LDDF+ +AMM++R F + +E ++V G ++ G V G D G T F F + +PRRP W T M+A LD E +FLEWRR IA EE S +VTPFEKNLEVWRQLWRV+ERS ++ Q+VDAR+PLFYYS DL AYA+E+ P R +V+VNKADYL+ Q+ EWA YF+ R FFSAR QE L QARE R + D G G PS + + S G E + +L R E+ A L+ LA +G + G+A +GMVG+PNVGKSS+INVL+G TPL H VRV V +TPGKTKHFQTL L MLCDCPGLVFPSFV+
Sbjct: 1 MPPKAGKKTNGGGVVGRALMRKHQQQGPAAVGAHEQQRLDGCK---QLSSVLEMNSLDDFLDTAMMAQRDFSAIKERDLLVLDAKTGGLTSILPRGQVTPG---ADKGMTTFAFRQLKVPRRPKWHTGMSAAALDRAEKASFLEWRREIAQLEETSGERARVTPFEKNLEVWRQLWRVLERSHVIVQIVDARDPLFYYSEDLHAYAAEMHPARERLVLVNKADYLTPAQRGEWATYFQKRGWNHAFFSARRAQELLTLQAREER------LKELEGRD-----GEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEAGGPSAP---VKVSCSRGEKEEEPESRTTIFPPILTRTELIARLKGLAARVGGAFAAAALEAGHAAGKATVGMVGFPNVGKSSVINVLMGVTPLEHDRVRVAVSSTPGKTKHFQTLPLDPETMLCDCPGLVFPSFVA 443
BLAST of mRNA_H-elongata_contig54930.12890.1 vs. uniprot
Match: W2PKW0_PHYPN (G domain-containing protein n=12 Tax=Phytophthora parasitica TaxID=4792 RepID=W2PKW0_PHYPN) HSP 1 Score: 271 bits (693), Expect = 1.920e-82 Identity = 167/420 (39.76%), Postives = 227/420 (54.05%), Query Frame = 1
Query: 115 DGSKARGKLTSVLEASNLDDFIASAMMSERAFESHRESTVIVGP-DGVEMTLDDDGMVRMGEEPQDAGNTEFDFEHMDLPRRPAWTTDMTAEELDALENKAFLEWRRGIASAEESKSGMKVTPFEKNLEVWRQLWRVVERSDLVCQLVDARNPLFYYSTDLEAYASELVPPRPTVVVVNKADYLSSYQQCEWARYFRDRSVTVLFFSARLQQEHLNRQAREGRDAAERSISPASSPDSTDSAGSNRFDSKDYQDSNVSSEEERGKEGGNERVQQEKIDHDDFFRPEGSPSTAGVGLHATRSAGMIPEYTGRKGDGAIHLLDRLEMCAELERLARTLGAGPDPERTKRNGGRACIGMVGYPNVGKSSIINVLVGATPLSHGGVRVRVGATPGKTKHFQTLVLSDSLMLCDCPGLVFPSFVS 1371
DG A L S LE S+LDDF+ASA+++ R F + +ES +++ D ++ D V E F M +PRRP W TAEEL+ LE ++FLEWRR IA E S ++VTPFEKNLEVWRQLW V ERSD++ Q+VDARNPLFY STDL+AYA E PR T+++VNK+D+L Q+ W +F+ ++ +FFSA+ Q+ ++ +A++ R E+ E D D +P G+P +K +L R+E+ + ++A + R K G GM+G+PNVGKSS+IN L+GA+ SH RV VGATPGKTKHFQT++LSD +MLCDCPGLVFPSFV+
Sbjct: 44 DGGDASVALASYLEGSSLDDFLASAVLANREFTAVKESIMLMEEADAGPQVVEKDKNVM----------PEMTFAEMKVPRRPKWDKSTTAEELNRLEKESFLEWRRDIAMLEASSDHLEVTPFEKNLEVWRQLWHVRERSDIMVQIVDARNPLFYRSTDLDAYAKEGETPRRTLLIVNKSDFLDDRQRTAWGDHFKKENIDFVFFSAKEAQDEIDEEAKKLRQ---------------------------------------------EQRNAESHDQYDEAKPAGAPQVV-----------EAEAVVAKKETSPYPVLSRVELLDFVTKIATDV-LDEVGVRVKDKG-LIKFGMMGFPNVGKSSVINALLGASTYSHKTQRVAVGATPGKTKHFQTMILSDKIMLCDCPGLVFPSFVN 395
BLAST of mRNA_H-elongata_contig54930.12890.1 vs. uniprot
Match: D0NWZ7_PHYIT (Large subunit GTPase 1 n=3 Tax=Phytophthora infestans TaxID=4787 RepID=D0NWZ7_PHYIT) HSP 1 Score: 272 bits (696), Expect = 1.940e-81 Identity = 166/420 (39.52%), Postives = 232/420 (55.24%), Query Frame = 1
Query: 115 DGSKARGKLTSVLEASNLDDFIASAMMSERAFESHRESTVIVGP-DGVEMTLDDDGMVRMGEEPQDAGNTEFDFEHMDLPRRPAWTTDMTAEELDALENKAFLEWRRGIASAEESKSGMKVTPFEKNLEVWRQLWRVVERSDLVCQLVDARNPLFYYSTDLEAYASELVPPRPTVVVVNKADYLSSYQQCEWARYFRDRSVTVLFFSARLQQEHLNRQAREGRDAAERSISPASSPDSTDSAGSNRFDSKDYQDSNVSSEEERGKEGGNERVQQEKIDHDDFFRPEGSPSTAGVGLHATRSAGMIPEYTGRKGDGAIHLLDRLEMCAELERLARTLGAGPDPERTKRNGGRACIGMVGYPNVGKSSIINVLVGATPLSHGGVRVRVGATPGKTKHFQTLVLSDSLMLCDCPGLVFPSFVS 1371
DG A L S LE S+LDDF+ASA+++ R F + +ES +++ D ++ D V E F M +PRRP W MTAEEL+ +E ++FLEWRR IA E S ++VTPFEKNLEVWRQLW V ERSD++ Q+VDARNPLFY STDL+AYA E PR T++VVNK+D+L Q+ W +F+ ++ +FFSA+ Q+ ++ +A++ R +E+R E ++ + + D E +T ++ S + +Y + A +LD + + + + L + GMVG+PNVGKSS+IN L+GA+ SH RV VGATPGKTKHFQT++LSD +MLCDCPGLVFPSFV+
Sbjct: 44 DGGDASVALASYLEGSSLDDFLASAVLANREFTAVKESIMLMEEADAGPQVVEKDKNVM----------PEMTFAEMKVPRRPQWDKSMTAEELNRMEKESFLEWRRDIAILEASSDHLEVTPFEKNLEVWRQLWHVRERSDIMVQIVDARNPLFYRSTDLDAYAKEGETPRRTLLVVNKSDFLDERQRTAWGDHFKKENINFVFFSAKEAQDEIDEEAKKLR------------------------------------QEQRNAESHDQYNEVKPADAPQVVEAEAVDATEDSSPYSVLSRVELLDYVTKI---ATEVLDEVGVRVKDKGLIK-------------------FGMVGFPNVGKSSVINALLGASTYSHKTQRVAVGATPGKTKHFQTMILSDKIMLCDCPGLVFPSFVN 395
BLAST of mRNA_H-elongata_contig54930.12890.1 vs. uniprot
Match: W2PN16_PHYPN (G domain-containing protein n=26 Tax=Phytophthora TaxID=4783 RepID=W2PN16_PHYPN) HSP 1 Score: 271 bits (693), Expect = 5.000e-81 Identity = 167/420 (39.76%), Postives = 227/420 (54.05%), Query Frame = 1
Query: 115 DGSKARGKLTSVLEASNLDDFIASAMMSERAFESHRESTVIVGP-DGVEMTLDDDGMVRMGEEPQDAGNTEFDFEHMDLPRRPAWTTDMTAEELDALENKAFLEWRRGIASAEESKSGMKVTPFEKNLEVWRQLWRVVERSDLVCQLVDARNPLFYYSTDLEAYASELVPPRPTVVVVNKADYLSSYQQCEWARYFRDRSVTVLFFSARLQQEHLNRQAREGRDAAERSISPASSPDSTDSAGSNRFDSKDYQDSNVSSEEERGKEGGNERVQQEKIDHDDFFRPEGSPSTAGVGLHATRSAGMIPEYTGRKGDGAIHLLDRLEMCAELERLARTLGAGPDPERTKRNGGRACIGMVGYPNVGKSSIINVLVGATPLSHGGVRVRVGATPGKTKHFQTLVLSDSLMLCDCPGLVFPSFVS 1371
DG A L S LE S+LDDF+ASA+++ R F + +ES +++ D ++ D V E F M +PRRP W TAEEL+ LE ++FLEWRR IA E S ++VTPFEKNLEVWRQLW V ERSD++ Q+VDARNPLFY STDL+AYA E PR T+++VNK+D+L Q+ W +F+ ++ +FFSA+ Q+ ++ +A++ R E+ E D D +P G+P +K +L R+E+ + ++A + R K G GM+G+PNVGKSS+IN L+GA+ SH RV VGATPGKTKHFQT++LSD +MLCDCPGLVFPSFV+
Sbjct: 44 DGGDASVALASYLEGSSLDDFLASAVLANREFTAVKESIMLMEEADAGPQVVEKDKNVM----------PEMTFAEMKVPRRPKWDKSTTAEELNRLEKESFLEWRRDIAMLEASSDHLEVTPFEKNLEVWRQLWHVRERSDIMVQIVDARNPLFYRSTDLDAYAKEGETPRRTLLIVNKSDFLDDRQRTAWGDHFKKENIDFVFFSAKEAQDEIDEEAKKLRQ---------------------------------------------EQRNAESHDQYDEAKPAGAPQVV-----------EAEAVVAKKETSPYPVLSRVELLDFVTKIATDV-LDEVGVRVKDKG-LIKFGMMGFPNVGKSSVINALLGASTYSHKTQRVAVGATPGKTKHFQTMILSDKIMLCDCPGLVFPSFVN 395
BLAST of mRNA_H-elongata_contig54930.12890.1 vs. uniprot
Match: F0WTQ0_9STRA (Large subunit GTPase 1 putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WTQ0_9STRA) HSP 1 Score: 271 bits (692), Expect = 5.530e-81 Identity = 177/428 (41.36%), Postives = 231/428 (53.97%), Query Frame = 1
Query: 115 DGSKARGKLTSVLEASNLDDFIASAMMSERAFESHRESTVIVGPDGVEMTLDDDGMVRMGEEPQDAGNTEFD--------FEHMDLPRRPAWTTDMTAEELDALENKAFLEWRRGIASAEESKSGMKVTPFEKNLEVWRQLWRVVERSDLVCQLVDARNPLFYYSTDLEAYASELVPPRPTVVVVNKADYLSSYQQCEWARYFRDRSVTVLFFSARLQQEHLNRQAREGRDAAERSISPASSPDSTDSAGSNRFDSKDYQDSNVSSEEERGKEGGNERVQQEKIDHDDFFRPEGSPSTAGVGLHATRSAGMIPEYTGRKGDGAIHLLDRLEMCAELERLA-RTLGAGPDPERTKRNGGRACIGMVGYPNVGKSSIINVLVGATPLSHGGVRVRVGATPGKTKHFQTLVLSDSLMLCDCPGLVFPSFVS 1371
DG A LTS +E S+LDDF+A+A++++R F + R+ TV++ +G +P +A +E F+ M +PRRP+W M+AEEL+ E +AFLEWRR IA E S SG +VTPFEKNLEVWRQLW V ERSD++ Q+VDARNPLFY S DL+ YA E T++VVNK+D+L+S Q+ EW +F+ + LFFSA+L Q+ ++ Q + R GN V +++ A RS PE I +L R+E+ L +A L ER K G GMVGYPNVGKSS+IN L+GA+ SH RV VGATPGKTKHFQTL+LSD +MLCDCPGLVFPSFV+
Sbjct: 40 DGGNASNALTSYIEGSSLDDFLATAVLADREFSAIRDRTVLM---------------ELGSQPINASASEISCAEVPKMSFQEMKVPRRPSWDASMSAEELNLHEREAFLEWRREIARLE-STSGSEVTPFEKNLEVWRQLWHVRERSDVLIQIVDARNPLFYRSKDLDKYAHEEHGTLRTLLVVNKSDFLTSEQRSEWLAHFKKEKIPSLFFSAKLAQDEIDDQVKTDR--------------------------------------------GNVDVPDQEL--------------------AFRSDTPNPE-------DPIKILSRVELLDYLHNIADEILEFVGTRERDK---GLIKFGMVGYPNVGKSSVINALLGASTHSHKIQRVAVGATPGKTKHFQTLILSDKIMLCDCPGLVFPSFVN 377
BLAST of mRNA_H-elongata_contig54930.12890.1 vs. uniprot
Match: A0A0P1AKE5_PLAHL (Large subunit gtpase 1 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AKE5_PLAHL) HSP 1 Score: 270 bits (690), Expect = 1.350e-80 Identity = 169/420 (40.24%), Postives = 227/420 (54.05%), Query Frame = 1
Query: 115 DGSKARGKLTSVLEASNLDDFIASAMMSERAFESHRESTVIV-GPDGVEMTLDDDGMVRMGEEPQDAGNTEFDFEHMDLPRRPAWTTDMTAEELDALENKAFLEWRRGIASAEESKSGMKVTPFEKNLEVWRQLWRVVERSDLVCQLVDARNPLFYYSTDLEAYASELVPPRPTVVVVNKADYLSSYQQCEWARYFRDRSVTVLFFSARLQQEHLNRQAREGRDAAERSISPASSPDSTDSAGSNRFDSKDYQDSNVSSEEERGKEGGNERVQQEKIDHDDFFRPEGSPSTAGVGLHATRSAGMIPEYTGRKGDGAIHLLDRLEMCAELERLARTLGAGPDPERTKRNGGRACIGMVGYPNVGKSSIINVLVGATPLSHGGVRVRVGATPGKTKHFQTLVLSDSLMLCDCPGLVFPSFVS 1371
DG A L S LE S+LDDF+ASA+++ R F + +ES +++ G D ++ D V E F M +PRRP W TAEEL+ LE + F+EWRR IA E S +VTPFEKNLEVWRQLW V ERSD++ Q+VDARNPLFY STDL+AYA E PR T+++VNK+D+L+ Q+ W YF ++ +FFSA+ Q ++++AR+ R + D ++FD+ + D +P T + + KG L R+E+ +AR + R K G G+VG+PNVGKSS+IN L+GA+ H RV VGATPGKTKHFQT++LSD +MLCDCPGLVFPSFV+
Sbjct: 44 DGGDATVALASYLEGSSLDDFLASAVLANREFTAVKESILLIDGADAGPQVVEKDSNVI----------PEMTFAEMKVPRRPQWDKSTTAEELNRLEKETFMEWRRNIAMLEASSDHQEVTPFEKNLEVWRQLWHVRERSDVIVQIVDARNPLFYRSTDLDAYAKEGEMPRRTLLIVNKSDFLNEPQRIAWGDYFTKENIEFVFFSAKEAQNEIDKEARKLRQ------------EQGDVRNCDQFDNTERAD---------------------------------APHTT-----------IKRDVADSKGSKKYPELSRVELLEYFTNIARVV-LHEVGVRVKDKG-LIKFGLVGFPNVGKSSVINALLGASTYLHKTQRVAVGATPGKTKHFQTMILSDQIMLCDCPGLVFPSFVN 395
BLAST of mRNA_H-elongata_contig54930.12890.1 vs. uniprot
Match: A0A2D4BR77_PYTIN (Large subunit GTPase 1 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BR77_PYTIN) HSP 1 Score: 270 bits (689), Expect = 1.990e-80 Identity = 171/419 (40.81%), Postives = 228/419 (54.42%), Query Frame = 1
Query: 115 DGSKARGKLTSVLEASNLDDFIASAMMSERAFESHRESTVIVGPDGVEMTLDDDGMVRMGEEPQDAGNTEFDFEHMDLPRRPAWTTDMTAEELDALENKAFLEWRRGIASAEESKSGMKVTPFEKNLEVWRQLWRVVERSDLVCQLVDARNPLFYYSTDLEAYASELVPPRPTVVVVNKADYLSSYQQCEWARYFRDRSVTVLFFSARLQQEHLNRQAREGRDAAERSISPASSPDSTDSAGSNRFDSKDYQDSNVSSEEERGKEGGNERVQQEKIDHDDFFRPEGSPSTAGVGLHATRSAGMIPEYTGRKGDGAIHLLDRLEMCAELERLARTLGAGPDPERTKRNGGRACIGMVGYPNVGKSSIINVLVGATPLSHGGVRVRVGATPGKTKHFQTLVLSDSLMLCDCPGLVFPSFVS 1371
DG A L S LE+S+L+DF+ASA+++ R F + +ES ++ + + G R ++ E F + +PRRP W T EEL+ LE ++FL+WRR IA E S ++VTPFEKNLEVWRQLW V ERSD++ Q+VDARNPLFY STDLE YA E PR T++VVNK+D+L+ Q+ W YF+ + V+FFSA+ QE + DA +S +S + +DS E P V A+ SA Y +L R E+ + R+A T+ + ++ G GMVG+PNVGKSS+IN L+GA+ SH RV VGATPGKTKHFQTL+LSD +MLCDCPGLVFPSFV+
Sbjct: 44 DGGDATVALASFLESSSLEDFLASAVLANREFTAMKESIMV-------LETAETGXTR-----RNLPMPEMTFAELKVPRRPHWDASTTPEELNRLEKESFLDWRREIAELEASHDSLEVTPFEKNLEVWRQLWHVRERSDIIVQIVDARNPLFYRSTDLEKYAREGDTPRRTLLVVNKSDFLNDRQRAAWGDYFKANNDEVVFFSAKKAQEEI--------DAMAKSSKELNSAEDSDS--------------------------------------------EVKPDNTEVETAASTSALDNDPYP---------VLTREELLEHMTRIAETVLK--EVGVRAKDKGLIKFGMVGFPNVGKSSVINALLGASTYSHKTQRVAVGATPGKTKHFQTLILSDKIMLCDCPGLVFPSFVN 387 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig54930.12890.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig54930.12890.1 >prot_H-elongata_contig54930.12890.1 ID=prot_H-elongata_contig54930.12890.1|Name=mRNA_H-elongata_contig54930.12890.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=459bp MPYGKSKPRRGQESLGRAIHRRRAQERIVDESNSSYDVDGSKARGKLTSVback to top mRNA from alignment at H-elongata_contig54930:109..3338- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig54930.12890.1 ID=mRNA_H-elongata_contig54930.12890.1|Name=mRNA_H-elongata_contig54930.12890.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3230bp|location=Sequence derived from alignment at H-elongata_contig54930:109..3338- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig54930:109..3338- >mRNA_H-elongata_contig54930.12890.1 ID=mRNA_H-elongata_contig54930.12890.1|Name=mRNA_H-elongata_contig54930.12890.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2754bp|location=Sequence derived from alignment at H-elongata_contig54930:109..3338- (Himanthalia elongata Himel1 dioecious)back to top |