mRNA_H-elongata_contig5477.12872.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig5477.12872.1
Unique NamemRNA_H-elongata_contig5477.12872.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig5477.12872.1 vs. uniprot
Match: A0A6H5JSB3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSB3_9PHAE)

HSP 1 Score: 518 bits (1333), Expect = 2.430e-167
Identity = 354/861 (41.11%), Postives = 457/861 (53.08%), Query Frame = 1 
Query:   10 VAKVLDSVSWETMGLLLGCLERSLPSRS-NGPGADSGLSPPTAQDSRGSSREDPKED--VLSERLVLEITEIFSPKELHIIALEHLHAYSGEKTVRAVLTVLRRSTERMPPVQRAKFLGAAMQPAIRAMTQMSKWRARAEIPQAAPVAEQNTALGLQESSRGHNDEQDEDHDKSQRDKNAANAIGAGGQPSPKVEEDFPSHGAYEAAAVAADAAVDFIGPLLNQAFAERA-----------RALGEEMTVTVADRKYSAAGTTVNDEAKILAASDRSLVAYVGFSLAALEVASETSACAASSAAAAVAPDPFSTVTPGSGAAVKALVRTEERLVALVMEAPAIDLRFVLFHNYRLTYANRMKRCQSEGERVGKYTEDAIPQCTRRESVRLAELALTGAMPWTSRGVSCVAHLVACNPKLRERWLPLVWSRAMERRLFLPHAQVLMMSARSKRVASKGLELACWVADRFDRRLPDEAGVFAFEWQPAEVLDDVDSKG---------------------------AHS----------------------------RRRL-----------------------RQRPLNPFHLDLAGFLQILIDVMVSCPVPSLRARGHLAVGTFLSATDEASRFRVLIRLIERCPWPNATGLLLDIFRHEMDRASRAFRRASDEPSLPVLAETGIDRAGNCASRPLCSPLVDGNENRDLSGVAVVNADPPSVRIGAPGERPLETPETLASSFTSAQAGTFVCEQLRRACRKVPVASLLVDMDSRTGGLVLARYAHALDRLSSGAGGWGVA------GKLELRRPDMLHETVLLVKGFLDYLRGVAITRQDAGPEFFRLFILEDACQQCLLEL 2298
            V +VLD+VSWE  GL++GCLER   S S N   + +G    ++ ++   +     +D   LSERL L + EIFSPKELH++ALEHLHAY+  +T+R VLT+LRRST++M   +R KFL A+++PA+ A  ++    A  + P A P        GL + S G       D D+                  P  +ED PS  AY+AAA AA+ A DFIGPL+ QA AE+A           R  G      VA     +     + E + ++ASD SL AY+GF+L+ALE+A ETS C                 +  +  A ++L R +ERLV +V+++P +DLRFVL H YR+++A+ +KR +   E  G+  E  +P      +V L E A+ GA+PWT RGVS +A+LVAC P+LR++WLPLVWSR  ERRLFLPHA+ LM   RSKRVA+KGLELAC+VA+R     PD  G FAF+W+P +  +++D  G                           AH+                            RR +                       R+R  +P HLDLAGFLQ+L+DVMVSCP+P LR RGH A+   L A DEASRFRVL RL+E CPWPNA GLLLD FR E+DRA R               + GI+                                             L +    +S F SA AG  VCEQLRRACR+ P+ASL+ DMDSRTGGL LARYAH LD +    GG G A      G+LELR P  L +  LLV+G LD LRG  IT  +AGPE FRLFILEDA QQCL EL
Sbjct:   70 VGEVLDTVSWEAFGLVVGCLERFATSASSNNSDSITGTFEKSSDEAETLTTSRDADDCAALSERLALAMAEIFSPKELHLMALEHLHAYTKARTLRVVLTILRRSTQQMVTARRWKFLEASLRPALEATKRVGLVAAAGDAP-AEP--------GLPQKSSG------SDADEXXXXXXXXXXXXXXXXXLPTADEDMPSRAAYDAAASAAETAADFIGPLMEQASAEQALLAVSRVPTAGRGEGRPAAAVVATSAGGSGRAVGSGEKEGVSASDLSLAAYIGFALSALELAGETSVCCTXX----XXXXXXXXGSEDNPPARESLARAQERLVGIVVDSP-LDLRFVLLHGYRVSFASGVKRRRKRSEGGGEKGESHLPAAKLGGAVGLGEAAINGALPWTLRGVSTLAYLVACEPRLRDKWLPLVWSRRTERRLFLPHAEALMRD-RSKRVANKGLELACFVAERLGG-FPDRTGAFAFDWEPGD--EEIDGAGDDXXXXXXXNGGGREEAHTPYGHTRTSAHNYEFYGCPDLLSHRYFTIFRPPPTPFHPFRRDVAAWQQRDADAGSSTISENTNPSSRRRLFDPHHLDLAGFLQVLVDVMVSCPLPGLRTRGHAALMALLGAADEASRFRVLRRLVELCPWPNARGLLLDAFRREIDRALR---------------QCGIEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSS----SSPFASALAGDVVCEQLRRACRRGPLASLMADMDSRTGGLALARYAHKLDAVGGARGGSGRAEAGAAWGRLELREPKKLLQNKLLVQGLLDELRGAVITADNAGPEHFRLFILEDAAQQCLQEL 887
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BLAST of mRNA_H-elongata_contig5477.12872.1 vs. uniprot
Match: D7G1P6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1P6_ECTSI)

HSP 1 Score: 446 bits (1147), Expect = 7.970e-142
Identity = 313/786 (39.82%), Postives = 411/786 (52.29%), Query Frame = 1 
Query:    1 RPAVAKVLDSVSWETMGLLLGCLERSLPSRS-NGPGADSGLSPPTAQDSRGSSREDPKED--VLSERLVLEITEIFSPKELHIIALEHLHAYSGEKTVRAVLTVLRRSTERMPPVQRAKFLGAAMQPAIRAMTQMSKWRARAEIPQAAPVAEQNTALGLQESSRGHNDEQDEDHDKSQRDKNAANAIGAGGQPSPKVEEDFPSHGAYEAAAVAADAAVDFIGPLLNQAFAERA-----------RALGEEMTVTVADRKYSAAGTTVNDEAKILAASDRSLVAYVGFSLAALEVASETSACAASSAAAAVAPDPFSTVTPGSGAAVKALVRTEERLVALVMEAPAIDLRFVLFHNYRLTYANRMKRCQSEGERVGKYTEDAIPQCTRRESVRLAELALTGAMPWTSRGVSCVAHLVACNPKLRERWLPLVWSRAMERRLFLPHAQVLMMSARSKRVASKGLELACWVADRFDRRLPDEAGVFAFEWQPAEVLDDVDSKGAHSRRRLRQRPLNPFHLDLAGFLQILIDVMVSCPVPSLRARGHLAVGTFLSATDEASRFRVLIRLIERCPWPNATGLLLDIFRHEMDRASRAFRRASDEPSLPVLAETGIDRAGNCASRPLCSPLVDGNENRDLSGVAVVNADPPSVRIGAPGERPLETPETLASSFTSAQAGTFVCEQLRRACRKVPVASLLVDMDSRTGGLVLARYAHALD-----RLSSGAGGWGVA-GKLELRRPDMLHETVLLVKGFLDYLRGVAITRQDAGPEFFRLFILEDACQQCLLEL 2298
            R AV +VLD+VSWE  GL++GCLER   S S N  G+ +G    ++ ++   +     +D   LSE L L + EIFSPKELH++ LEHLHAY+  +TVR VLT+LRRSTERM   +R+KFL A+++PA++A  ++    A  + P A P        GL++ S G   +                         P  + D PS  AY+AAA AA+ A DFIGPL+ QA AERA           R  G      VA     +     + E + ++ASD SL AY+GF+L+ALE+A ETS C               T +  + AA ++L R EERL+ +V+++P +DLRF L H  R++YA+ +KR + + E  G+  +  +P      +V LAE A+ GA+PWT RGVS +A+LVAC P+LR++WLPLVWSR  ERRLFLPHA+VLM   RS+RVA+KGLELAC+VA+R     PD +G +AF+W+P +  +++D  G                    G  ++L+DVMVSCP+P LR RGH A+   LS  DEASRFR+L RL+E CPWPN                                                                                                          L RACR+ P+ASL+ DMDSRTGGL LARYAH LD     R  SG    G A G+L LR P  L +  LLV+G LD LRG  IT  +AGPE FRLFILEDA QQCL EL
Sbjct:   67 RAAVGEVLDTVSWEAFGLVVGCLERFATSPSPNSSGSVTGTFEKSSDEAETLTTSRDADDCAALSEGLALAMAEIFSPKELHLMTLEHLHAYTKARTVRVVLTILRRSTERMATARRSKFLEASLRPALKAAKRVGLVAAAGDAP-AEP--------GLRQKSSG--SDXXXXXXXXXXXXXXXXXXXXXXXLLPTADGDMPSSAAYDAAASAAETAADFIGPLMEQASAERALLAVSGLPTAGRGEGRPAAAAVAXXXGGSGHAVGSGEKEGVSASDLSLAAYIGFALSALELAGETSVCXXXX----XXXXXXXTGSEDNPAAGESLARAEERLIGIVVDSP-LDLRFALLHGCRVSYASGVKRRRRKSEGGGEEGKSQLPAARLGGAVGLAEAAVNGALPWTLRGVSTLAYLVACEPRLRDKWLPLVWSRRTERRLFLPHAEVLMRD-RSRRVANKGLELACFVAERLGG-FPDRSGAYAFDWEPGD--EEIDGAGDDXXXXXXWNG--------GGRQEVLVDVMVSCPLPGLRTRGHAALVAILSGADEASRFRLLRRLVELCPWPN----------------------------------------------------------------------------------------------------------LLRACRRGPLASLMADMDSRTGGLALARYAHKLDAVGGARADSGRAEAGAAWGRLGLREPKKLLQNRLLVQGLLDELRGAVITANNAGPEHFRLFILEDAAQQCLQEL 718
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5477.12872.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JSB3_9PHAE2.430e-16741.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G1P6_ECTSI7.970e-14239.82Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig5477contigH-elongata_contig5477:5649..10432 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons6
Model size2571
Cds size2262
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig5477.12872.1prot_H-elongata_contig5477.12872.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig5477 5694..10168 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930892.8440557-UTR-H-elongata_contig5477:5648..56931622930892.8440557-UTR-H-elongata_contig5477:5648..5693Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig5477 5649..5693 +
1691679614.4314299-UTR-H-elongata_contig5477:5648..56931691679614.4314299-UTR-H-elongata_contig5477:5648..5693Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig5477 5649..5693 +
1622930893.0255697-UTR-H-elongata_contig5477:10168..104321622930893.0255697-UTR-H-elongata_contig5477:10168..10432Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig5477 10169..10432 +
1691679614.522736-UTR-H-elongata_contig5477:10168..104321691679614.522736-UTR-H-elongata_contig5477:10168..10432Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig5477 10169..10432 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930892.874802-CDS-H-elongata_contig5477:5693..59261622930892.874802-CDS-H-elongata_contig5477:5693..5926Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5477 5694..5926 +
1691679614.441411-CDS-H-elongata_contig5477:5693..59261691679614.441411-CDS-H-elongata_contig5477:5693..5926Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5477 5694..5926 +
1622930892.8995106-CDS-H-elongata_contig5477:6466..73911622930892.8995106-CDS-H-elongata_contig5477:6466..7391Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5477 6467..7391 +
1691679614.4592087-CDS-H-elongata_contig5477:6466..73911691679614.4592087-CDS-H-elongata_contig5477:6466..7391Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5477 6467..7391 +
1622930892.9200873-CDS-H-elongata_contig5477:7836..79261622930892.9200873-CDS-H-elongata_contig5477:7836..7926Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5477 7837..7926 +
1691679614.4702022-CDS-H-elongata_contig5477:7836..79261691679614.4702022-CDS-H-elongata_contig5477:7836..7926Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5477 7837..7926 +
1622930892.9449081-CDS-H-elongata_contig5477:8311..84461622930892.9449081-CDS-H-elongata_contig5477:8311..8446Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5477 8312..8446 +
1691679614.4809458-CDS-H-elongata_contig5477:8311..84461691679614.4809458-CDS-H-elongata_contig5477:8311..8446Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5477 8312..8446 +
1622930892.9636192-CDS-H-elongata_contig5477:8782..95411622930892.9636192-CDS-H-elongata_contig5477:8782..9541Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5477 8783..9541 +
1691679614.4903274-CDS-H-elongata_contig5477:8782..95411691679614.4903274-CDS-H-elongata_contig5477:8782..9541Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5477 8783..9541 +
1622930893.0061095-CDS-H-elongata_contig5477:10048..101681622930893.0061095-CDS-H-elongata_contig5477:10048..10168Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5477 10049..10168 +
1691679614.5091422-CDS-H-elongata_contig5477:10048..101681691679614.5091422-CDS-H-elongata_contig5477:10048..10168Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5477 10049..10168 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig5477.12872.1

>prot_H-elongata_contig5477.12872.1 ID=prot_H-elongata_contig5477.12872.1|Name=mRNA_H-elongata_contig5477.12872.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=754bp
MGLLLGCLERSLPSRSNGPGADSGLSPPTAQDSRGSSREDPKEDVLSERL
VLEITEIFSPKELHIIALEHLHAYSGEKTVRAVLTVLRRSTERMPPVQRA
KFLGAAMQPAIRAMTQMSKWRARAEIPQAAPVAEQNTALGLQESSRGHND
EQDEDHDKSQRDKNAANAIGAGGQPSPKVEEDFPSHGAYEAAAVAADAAV
DFIGPLLNQAFAERARALGEEMTVTVADRKYSAAGTTVNDEAKILAASDR
SLVAYVGFSLAALEVASETSACAASSAAAAVAPDPFSTVTPGSGAAVKAL
VRTEERLVALVMEAPAIDLRFVLFHNYRLTYANRMKRCQSEGERVGKYTE
DAIPQCTRRESVRLAELALTGAMPWTSRGVSCVAHLVACNPKLRERWLPL
VWSRAMERRLFLPHAQVLMMSARSKRVASKGLELACWVADRFDRRLPDEA
GVFAFEWQPAEVLDDVDSKGAHSRRRLRQRPLNPFHLDLAGFLQILIDVM
VSCPVPSLRARGHLAVGTFLSATDEASRFRVLIRLIERCPWPNATGLLLD
IFRHEMDRASRAFRRASDEPSLPVLAETGIDRAGNCASRPLCSPLVDGNE
NRDLSGVAVVNADPPSVRIGAPGERPLETPETLASSFTSAQAGTFVCEQL
RRACRKVPVASLLVDMDSRTGGLVLARYAHALDRLSSGAGGWGVAGKLEL
RRPDMLHETVLLVKGFLDYLRGVAITRQDAGPEFFRLFILEDACQQCLLE
LLR*
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mRNA from alignment at H-elongata_contig5477:5649..10432+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig5477.12872.1 ID=mRNA_H-elongata_contig5477.12872.1|Name=mRNA_H-elongata_contig5477.12872.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=4784bp|location=Sequence derived from alignment at H-elongata_contig5477:5649..10432+ (Himanthalia elongata Himel1 dioecious)
CGCCCCGCGGTGGCTAAAGTCCTGGATTCTGTCTCGTGGGAAACGATGGG
TCTCTTGCTGGGTTGTCTAGAGCGATCGTTGCCCTCGAGATCGAACGGAC
CGGGTGCTGATTCTGGGTTATCCCCTCCCACCGCCCAGGACAGCAGAGGG
AGTTCCAGAGAGGACCCCAAGGAAGATGTTCTGTCCGAGAGACTGGTGTT
GGAAATTACGGAGATATTTAGCCCGAAAGAGCTCCATATCATCGCGCTCG
AGCATCTACACGCTTACAGCGGGGAGAAGTGAGGCTGGCTTATTTTGTAC
CCCTTACCCTTGAAACGATCGCCCAGGATTCGATGTGTGTGTCGGGGGGA
GGGGGGGTTCTGTCGAAAGCTCTACAGTTATCGCCTGTGTACGCTTGCAT
GAAAACTTGCTCTAATACAAGCACGGTGTCTCTACTGTACGTCCAGCAAG
TTACGATGATAAATATCACTTTCTGCGGAAAGGTTTGACGCTATTTGTGT
GACCATTTTGGGATAAAGAGCACAAGACCAAGCCAACGGAATGCCATGAG
CGCAACATGAAAGAATCGCGCTAAATCGGCCTTCTTTTGTTCCATTCTTT
CCGTCGGAATGAAATCTAAAAATATAATTTTCTTGCTTTCTTATCGGAGG
GGACAGCGTTCCTATCTGTACGCGAAGTGTGTTTCGATGTAAGGGCGCTA
ATCCCGGAAACATCACCTGATGTTATTGATCCTCGCGACCTGCGGCTGCA
ACTCTAGTCAGCTACCCTTGAAACCCCCCGCACACTTATTCTGCATCGAT
AAAATACACGTCTCGCAGGACAGTGCGCGCCGTCCTGACCGTGCTTAGAC
GCAGCACCGAGCGGATGCCGCCTGTCCAAAGAGCCAAGTTTCTTGGGGCA
GCTATGCAGCCAGCCATACGAGCCATGACGCAAATGTCGAAGTGGCGCGC
CCGAGCTGAAATCCCACAGGCCGCCCCTGTCGCTGAACAAAATACTGCGC
TGGGCTTGCAGGAATCCAGCAGAGGTCATAACGACGAGCAAGATGAAGAT
CACGACAAGTCGCAACGCGATAAAAATGCTGCTAATGCCATTGGCGCTGG
GGGGCAACCTTCGCCCAAGGTGGAAGAAGATTTCCCCTCGCACGGAGCTT
ACGAGGCCGCCGCTGTAGCGGCAGATGCTGCCGTCGACTTCATCGGCCCT
CTGCTCAACCAGGCTTTCGCAGAGAGGGCGCGAGCTCTTGGTGAAGAAAT
GACTGTAACTGTAGCGGACAGAAAATATTCCGCGGCGGGTACCACCGTAA
ACGATGAGGCCAAGATCCTGGCGGCCTCTGACCGGTCTCTGGTGGCTTAC
GTAGGATTTTCCCTGGCGGCTCTCGAAGTGGCCTCGGAGACGTCCGCCTG
CGCAGCTTCTTCCGCTGCAGCTGCTGTTGCTCCCGACCCCTTCTCCACGG
TGACACCTGGAAGTGGTGCCGCGGTGAAAGCATTGGTGAGGACCGAGGAG
CGACTGGTGGCTCTCGTCATGGAGGCCCCCGCGATCGACCTTCGGTTTGT
CCTCTTCCACAATTACCGCTTGACGTACGCCAACCGAATGAAGCGGTGTC
AGTCTGAAGGAGAGAGGGTAGGGAAATATACGGAGGACGCGATTCCGCAA
TGCACTCGGCGAGAGTCTGTGAGACTCGCTGAGCTTGCACTTACAGGGGC
AATGCCGTGGACGTCCCGAGGAGTTTCTTGCGTCGCTCATTTGGTGAGGG
TGGCTGAAGTGAAGGCGTGTTTCGCATTAAGGAATTTGGAGATGGGTGTT
GGGTAGAGAATCACAACAATGTAACACACTTGAAAGAAGGGCGGAACATG
GATATCGTTTGATATTTGTAGCACTCCGCGCCGTGGCGTACACACCTCCT
TCCTGATCAATACCAATTACGCGCGCCTTCAATTCATTTTTACCTTACCT
TGTGTCGAGTGTGAACCGAGCGCTGCTCGGAATACCCAAGGCCGCGTTCA
TCCATCGCCTACGGTGTGCGAGATTGCCGAGTAGCCTAGTGTTCGAGAGC
ATTACAGCGGGTGGTGGAACGTTTGTGTGTGTTTATTCTCACATGCTGTT
CCCGAGAGAGTTAATTCCCCGCAATGATGTTGTTTCTGATGCCCTCGCCC
GTGTGAGGTTTCGATGGACGATATGCTGCGCGTGGCAGGTAGCTTGTAAC
CCAAAGCTGCGCGAACGGTGGCTTCCCCTCGTATGGTCGCGGGCTATGGA
ACGCAGACTGTTTTTACCACACGCACAGGTGAGGGAAGGGAATCACCGTT
CGCATCCATACGGATGTGCGTTGGCGTAGTCTCTCCTATCGCGGTATATT
ATTTCATCTTCAACGCCTTTGTACCCTACCATGGCCTCCTTGACTGAGGT
AAGAAACATCCACAATATTCGCGCGGCCGTGTGTTCTACGGTAGCACTCA
AATCATTTTGACGCCTTTCGGAAGATGACTATCCATCGACTTTGGCACCG
TCTGTTTTCAATCGTCGCGACAAAGGCAAAGACGATTATTAGTGTCATAT
TCAAAATGAGGTCCGGAGACAATCGGGTCGGCGGAGCCCGAGCCGAAGCC
TCGGGCATTTTTTACCAAAGCCTTCCCCCCTCACCGATGTTGGATTTCTT
GTTCTGCGCTAAGGTGCTGATGATGAGTGCGAGGTCGAAGCGTGTTGCTA
GCAAGGGCTTAGAGCTAGCGTGTTGGGTGGCAGACCGATTCGACCGCCGA
TTGCCGGATGAGGCAGGAGTCTTCGCCTTCGAGTGGCAGCCTGCGGAGGT
GACCGACGACGACGTTTGAAATCTAAACGCGAGCGATGGCTGTGTTGCTG
AGGATTATGACACGACCTTCTGGCGACGTGTTTGTGTGGGCCAATTATAG
GTTTTATAGGAACCTTATTCCTTTGCCTCGTACCGTACAACTATACAGTG
ATGTAGTCTTGCTCTCGTTGTTAATTGAGCATAATGTTAAAGTAGCTTCA
TTACGTGTTTTTTTTTTTTATATCCTCCTTTGCCCTGTTCTATCTTGCGT
GACGGTCGACCCACAACCGTTTCGGCCCTGAAACGTGGTGACCACTCGCG
TTGGTGGTGCTCCTGATGTCTCGACTCGACGCAGGTGCTAGATGATGTCG
ACAGCAAGGGGGCGCACAGCCGACGTCGGTTGCGGCAACGACCCCTAAAT
CCCTTCCACCTAGACCTCGCTGGCTTCCTGCAGATCCTGATCGACGTCAT
GGTGTCCTGTCCGGTTCCAAGCCTTCGCGCGCGTGGCCATTTAGCCGTGG
GTACCTTCTTATCAGCGACGGATGAGGCCAGCCGCTTCCGCGTATTGATA
CGACTGATTGAGCGGTGTCCTTGGCCCAACGCTACCGGGTTACTCCTGGA
CATTTTCCGCCATGAGATGGATCGAGCCTCCCGAGCTTTCCGGCGCGCCT
CCGACGAGCCGTCTCTTCCAGTACTGGCAGAGACAGGAATTGACAGAGCT
GGAAATTGCGCAAGCAGACCCCTGTGTTCACCGCTTGTTGATGGAAATGA
AAATCGTGACCTAAGTGGGGTTGCGGTTGTCAATGCAGACCCGCCTTCGG
TTCGTATTGGCGCCCCTGGAGAGAGGCCGCTGGAGACCCCAGAAACGTTA
GCGTCGAGCTTCACATCCGCCCAGGCTGGAACATTTGTGTGCGAGCAGCT
TCGGCGAGCTTGTCGGAAGGTGCCTGTGGCATCATTGCTCGTGGATATGG
ATAGCCGTACGGGCGGTCTGGTCTTGGCACGGTACGCACACGCTTTAGAT
CGGCTTAGCAGCGGGGCTGGTGGTTGGGGTGTGGCGGGGAAACTGGAACT
TCGTCGACCGGACATGTTGCACGAAACCGTGCTCCTCGTCAAGGTGACTC
GCTGATTGAAGAGTGTGTGTAGCCACCATCCATTGTGTCGGCTGCTCGTG
ATCGTTTCGCCCGACTCGCTCGGTTGGGTTCGCCATCGTATCGTGAAACG
TGTCTTTTTGCGCTCCGATATCCTTGGGAGTGATGCACCGGTTTTGCTCG
CCTAACTATGGCCGAATCAACAGCAGCCGTCAATGTCCTCGGTTTTCGTT
GTGTTTTTTTTCGTCGACGATTGAGTAGACCGCGTACCACAAAGCCCTTG
ATGCGTCCCAATATCTAAGCTCAGCAGCACGATGCCCTAAGCGAACATCC
CTTCAATGTCGAACTTTACCATAAATAAATATTAAAATAGTGTATATTGT
AGTACAAGAGGGGGTGGTGCCGCCGTGGAGAAATTGTCTTTTCCGAGCGC
GAATCGTGCAAGTCTATCATATACATTTGCCTCGTATATCGTGGTTCTTC
TGTCATATGTTGACATCCCCGACGACCGAATTCGCAAACCATTTCCACAG
GGCTTTCTGGACTATCTTCGAGGGGTTGCGATCACCAGACAAGACGCAGG
CCCTGAGTTCTTTAGACTGTTCATCCTGGAGGATGCCTGCCAGCAGTGCC
TGCTAGAACTTCTACGGTAGATATTTCGAGAGGAAATAATTTGTTTAGAC
TGAAAAAGTAACGGATCGCGCGGGTGGTGAATCGGGTGCAAGTGCACCGT
GGTCCTATATTTTTATGGAATATTTTCACGCATCGAGTAGATTTTGAAGT
CTATTCACAGCACAACCATGGAAAATGACCCCATCGAACTTGCCCTTTAA
GCCGCCGTCAGGAGCACCTTAACGAGTCCGGTAACAGTTCCCTGCCAAGT
ATGATACAAGACACGCGAAAACCGAGAACCGGGC
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Coding sequence (CDS) from alignment at H-elongata_contig5477:5649..10432+

>mRNA_H-elongata_contig5477.12872.1 ID=mRNA_H-elongata_contig5477.12872.1|Name=mRNA_H-elongata_contig5477.12872.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=4524bp|location=Sequence derived from alignment at H-elongata_contig5477:5649..10432+ (Himanthalia elongata Himel1 dioecious)
ATGGGTCTCTTGCTGGGTTGTCTAGAGCGATCGTTGCCCTCGAGATCGAA
CGGACCGGGTGCTGATTCTGGGTTATCCCCTCCCACCGCCCAGGACAGCA
GAGGGAGTTCCAGAGAGGACCCCAAGGAAGATGTTCTGTCCGAGAGACTG
GTGTTGGAAATTACGGAGATATTTAGCCCGAAAGAGCTCCATATCATCGC
GCTCGAGCATCTACACGCTTACAGCGGGGAGAAATGGGTCTCTTGCTGGG
TTGTCTAGAGCGATCGTTGCCCTCGAGATCGAACGGACCGGGTGCTGATT
CTGGGTTATCCCCTCCCACCGCCCAGGACAGCAGAGGGAGTTCCAGAGAG
GACCCCAAGGAAGATGTTCTGTCCGAGAGACTGGTGTTGGAAATTACGGA
GATATTTAGCCCGAAAGAGCTCCATATCATCGCGCTCGAGCATCTACACG
CTTACAGCGGGGAGAAGACAGTGCGCGCCGTCCTGACCGTGCTTAGACGC
AGCACCGAGCGGATGCCGCCTGTCCAAAGAGCCAAGTTTCTTGGGGCAGC
TATGCAGCCAGCCATACGAGCCATGACGCAAATGTCGAAGTGGCGCGCCC
GAGCTGAAATCCCACAGGCCGCCCCTGTCGCTGAACAAAATACTGCGCTG
GGCTTGCAGGAATCCAGCAGAGGTCATAACGACGAGCAAGATGAAGATCA
CGACAAGTCGCAACGCGATAAAAATGCTGCTAATGCCATTGGCGCTGGGG
GGCAACCTTCGCCCAAGGTGGAAGAAGATTTCCCCTCGCACGGAGCTTAC
GAGGCCGCCGCTGTAGCGGCAGATGCTGCCGTCGACTTCATCGGCCCTCT
GCTCAACCAGGCTTTCGCAGAGAGGGCGCGAGCTCTTGGTGAAGAAATGA
CTGTAACTGTAGCGGACAGAAAATATTCCGCGGCGGGTACCACCGTAAAC
GATGAGGCCAAGATCCTGGCGGCCTCTGACCGGTCTCTGGTGGCTTACGT
AGGATTTTCCCTGGCGGCTCTCGAAGTGGCCTCGGAGACGTCCGCCTGCG
CAGCTTCTTCCGCTGCAGCTGCTGTTGCTCCCGACCCCTTCTCCACGGTG
ACACCTGGAAGTGGTGCCGCGGTGAAAGCATTGGTGAGGACCGAGGAGCG
ACTGGTGGCTCTCGTCATGGAGGCCCCCGCGATCGACCTTCGGTTTGTCC
TCTTCCACAATTACCGCTTGACGTACGCCAACCGAATGAAGCGGTGTCAG
TCTGAAGGAGAGAGGGTAGGGAAATATACGGAGGACGCGATTCCGCAATG
CACTCGGCGAGAGTCTGTGAGACTCGCTGAGCTTGCACTTACAGGGGCAA
TGCCGTGGACGTCCCGAGGAGTTTCTTGCGTCGCTCATTTGGACAGTGCG
CGCCGTCCTGACCGTGCTTAGACGCAGCACCGAGCGGATGCCGCCTGTCC
AAAGAGCCAAGTTTCTTGGGGCAGCTATGCAGCCAGCCATACGAGCCATG
ACGCAAATGTCGAAGTGGCGCGCCCGAGCTGAAATCCCACAGGCCGCCCC
TGTCGCTGAACAAAATACTGCGCTGGGCTTGCAGGAATCCAGCAGAGGTC
ATAACGACGAGCAAGATGAAGATCACGACAAGTCGCAACGCGATAAAAAT
GCTGCTAATGCCATTGGCGCTGGGGGGCAACCTTCGCCCAAGGTGGAAGA
AGATTTCCCCTCGCACGGAGCTTACGAGGCCGCCGCTGTAGCGGCAGATG
CTGCCGTCGACTTCATCGGCCCTCTGCTCAACCAGGCTTTCGCAGAGAGG
GCGCGAGCTCTTGGTGAAGAAATGACTGTAACTGTAGCGGACAGAAAATA
TTCCGCGGCGGGTACCACCGTAAACGATGAGGCCAAGATCCTGGCGGCCT
CTGACCGGTCTCTGGTGGCTTACGTAGGATTTTCCCTGGCGGCTCTCGAA
GTGGCCTCGGAGACGTCCGCCTGCGCAGCTTCTTCCGCTGCAGCTGCTGT
TGCTCCCGACCCCTTCTCCACGGTGACACCTGGAAGTGGTGCCGCGGTGA
AAGCATTGGTGAGGACCGAGGAGCGACTGGTGGCTCTCGTCATGGAGGCC
CCCGCGATCGACCTTCGGTTTGTCCTCTTCCACAATTACCGCTTGACGTA
CGCCAACCGAATGAAGCGGTGTCAGTCTGAAGGAGAGAGGGTAGGGAAAT
ATACGGAGGACGCGATTCCGCAATGCACTCGGCGAGAGTCTGTGAGACTC
GCTGAGCTTGCACTTACAGGGGCAATGCCGTGGACGTCCCGAGGAGTTTC
TTGCGTCGCTCATTTGGTAGCTTGTAACCCAAAGCTGCGCGAACGGTGGC
TTCCCCTCGTATGGTCGCGGGCTATGGAACGCAGACTGTTTTTACCACAC
GCACAGGTAGCTTGTAACCCAAAGCTGCGCGAACGGTGGCTTCCCCTCGT
ATGGTCGCGGGCTATGGAACGCAGACTGTTTTTACCACACGCACAGGTGC
TGATGATGAGTGCGAGGTCGAAGCGTGTTGCTAGCAAGGGCTTAGAGCTA
GCGTGTTGGGTGGCAGACCGATTCGACCGCCGATTGCCGGATGAGGCAGG
AGTCTTCGCCTTCGAGTGGCAGCCTGCGGAGGTGCTGATGATGAGTGCGA
GGTCGAAGCGTGTTGCTAGCAAGGGCTTAGAGCTAGCGTGTTGGGTGGCA
GACCGATTCGACCGCCGATTGCCGGATGAGGCAGGAGTCTTCGCCTTCGA
GTGGCAGCCTGCGGAGGTGCTAGATGATGTCGACAGCAAGGGGGCGCACA
GCCGACGTCGGTTGCGGCAACGACCCCTAAATCCCTTCCACCTAGACCTC
GCTGGCTTCCTGCAGATCCTGATCGACGTCATGGTGTCCTGTCCGGTTCC
AAGCCTTCGCGCGCGTGGCCATTTAGCCGTGGGTACCTTCTTATCAGCGA
CGGATGAGGCCAGCCGCTTCCGCGTATTGATACGACTGATTGAGCGGTGT
CCTTGGCCCAACGCTACCGGGTTACTCCTGGACATTTTCCGCCATGAGAT
GGATCGAGCCTCCCGAGCTTTCCGGCGCGCCTCCGACGAGCCGTCTCTTC
CAGTACTGGCAGAGACAGGAATTGACAGAGCTGGAAATTGCGCAAGCAGA
CCCCTGTGTTCACCGCTTGTTGATGGAAATGAAAATCGTGACCTAAGTGG
GGTTGCGGTTGTCAATGCAGACCCGCCTTCGGTTCGTATTGGCGCCCCTG
GAGAGAGGCCGCTGGAGACCCCAGAAACGTTAGCGTCGAGCTTCACATCC
GCCCAGGCTGGAACATTTGTGTGCGAGCAGCTTCGGCGAGCTTGTCGGAA
GGTGCCTGTGGCATCATTGCTCGTGGATATGGATAGCCGTACGGGCGGTC
TGGTCTTGGCACGGTACGCACACGCTTTAGATCGGCTTAGCAGCGGGGCT
GGTGGTTGGGGTGTGGCGGGGAAACTGGAACTTCGTCGACCGGACATGTT
GCACGAAACCGTGCTCCTCGTCAAGGTGCTAGATGATGTCGACAGCAAGG
GGGCGCACAGCCGACGTCGGTTGCGGCAACGACCCCTAAATCCCTTCCAC
CTAGACCTCGCTGGCTTCCTGCAGATCCTGATCGACGTCATGGTGTCCTG
TCCGGTTCCAAGCCTTCGCGCGCGTGGCCATTTAGCCGTGGGTACCTTCT
TATCAGCGACGGATGAGGCCAGCCGCTTCCGCGTATTGATACGACTGATT
GAGCGGTGTCCTTGGCCCAACGCTACCGGGTTACTCCTGGACATTTTCCG
CCATGAGATGGATCGAGCCTCCCGAGCTTTCCGGCGCGCCTCCGACGAGC
CGTCTCTTCCAGTACTGGCAGAGACAGGAATTGACAGAGCTGGAAATTGC
GCAAGCAGACCCCTGTGTTCACCGCTTGTTGATGGAAATGAAAATCGTGA
CCTAAGTGGGGTTGCGGTTGTCAATGCAGACCCGCCTTCGGTTCGTATTG
GCGCCCCTGGAGAGAGGCCGCTGGAGACCCCAGAAACGTTAGCGTCGAGC
TTCACATCCGCCCAGGCTGGAACATTTGTGTGCGAGCAGCTTCGGCGAGC
TTGTCGGAAGGTGCCTGTGGCATCATTGCTCGTGGATATGGATAGCCGTA
CGGGCGGTCTGGTCTTGGCACGGTACGCACACGCTTTAGATCGGCTTAGC
AGCGGGGCTGGTGGTTGGGGTGTGGCGGGGAAACTGGAACTTCGTCGACC
GGACATGTTGCACGAAACCGTGCTCCTCGTCAAGGGCTTTCTGGACTATC
TTCGAGGGGTTGCGATCACCAGACAAGACGCAGGCCCTGAGTTCTTTAGA
CTGTTCATCCTGGAGGATGCCTGCCAGCAGTGCCTGCTAGAACTTCTACG
GTAGGGCTTTCTGGACTATCTTCGAGGGGTTGCGATCACCAGACAAGACG
CAGGCCCTGAGTTCTTTAGACTGTTCATCCTGGAGGATGCCTGCCAGCAG
TGCCTGCTAGAACTTCTACGGTAG
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