mRNA_H-elongata_contig54559.12841.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig54559.12841.1
Unique NamemRNA_H-elongata_contig54559.12841.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig54559.12841.1 vs. uniprot
Match: A0A6H5KLX5_9PHAE (HORMA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KLX5_9PHAE)

HSP 1 Score: 134 bits (338), Expect = 9.100e-33
Identity = 72/111 (64.86%), Postives = 85/111 (76.58%), Query Frame = 1 
Query:  736 TPPEELEDQLRSALLQIGKSSAHLPPRHGCTFALHVEAQEGAQGEGS--DDNKDRNEASLVRSALQGGNWLLADDGAQRVQAESGQRRLVPIKSVRGPGLRLDLSAEMGDC 1062
            T  +++EDQLRSALLQI KSSAHLP R GCTFALHVEA E  +G+    D  +D  ++S VRSAL+GG W+LAD  AQ V AE G+RR+VPIKSVRG GL L+LS EMGDC
Sbjct:  117 TSLQDVEDQLRSALLQIQKSSAHLPTRQGCTFALHVEAHEDNEGQVGRHDATQDYAQSSPVRSALRGGKWVLADSVAQGVLAEPGRRRIVPIKSVRGRGLSLNLSTEMGDC 227
[Close]
BLAST of mRNA_H-elongata_contig54559.12841.1 vs. uniprot
Match: W7TK13_9STRA (Mad2 mitotic arrest deficient-like 2 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TK13_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 6.070e-9
Identity = 37/79 (46.84%), Postives = 46/79 (58.23%), Query Frame = 3 
Query:  450 VSPPSSKAAIFERRRKYGVQVWMSRHPDLNDYVYQVLLRTRDLIAQGVVRKIIVCFFEEGGQHHVHHKVQPVERIAFEL 686
            V PP    AIFERRRKY V V+MSRHPDLN Y+++VL     +  +G V K+IV  +        H    P+E  AFEL
Sbjct:   31 VYPP----AIFERRRKYDVPVFMSRHPDLNLYIHEVLHAAGAMFMEGSVDKVIVTLYGSRSDQEGH---APLESFAFEL 102
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BLAST of mRNA_H-elongata_contig54559.12841.1 vs. uniprot
Match: A0A835YLW3_9STRA (HORMA domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLW3_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 8.890e-8
Identity = 25/52 (48.08%), Postives = 36/52 (69.23%), Query Frame = 3 
Query:  477 IFERRRKYGVQVWMSRHPDLNDYVYQVLLRTRDLIAQGVVRKIIVCFFEEGG 632
            +FERRR Y V VWMSRHP+LN+Y+ Q L   R L+ + ++ ++ +CF  E G
Sbjct:   50 MFERRRAYEVPVWMSRHPELNEYIAQALANARPLLVERLLHRVYLCFKRENG 101
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BLAST of mRNA_H-elongata_contig54559.12841.1 vs. uniprot
Match: A0A4D9CXK7_9STRA (HORMA domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CXK7_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 9.140e-8
Identity = 37/79 (46.84%), Postives = 46/79 (58.23%), Query Frame = 3 
Query:  450 VSPPSSKAAIFERRRKYGVQVWMSRHPDLNDYVYQVLLRTRDLIAQGVVRKIIVCFFEEGGQHHVHHKVQPVERIAFEL 686
            V PP    AIFERRRKY V V+MSRHPDLN Y+++VL     +  +G V K+IV  +        H    P+E  AFEL
Sbjct:   31 VYPP----AIFERRRKYEVPVFMSRHPDLNLYIHEVLHAAGAMFMEGSVDKVIVTLYGSRSDQGGH---APLESFAFEL 102
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BLAST of mRNA_H-elongata_contig54559.12841.1 vs. uniprot
Match: UPI00077A86D8 (mitotic spindle assembly checkpoint protein MAD2B-like isoform X1 n=1 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077A86D8)

HSP 1 Score: 57.4 bits (137), Expect = 4.250e-6
Identity = 33/98 (33.67%), Postives = 51/98 (52.04%), Query Frame = 3 
Query:  393 GFLVGFFLLL*SPLLRITSVSPPSSKAAIFERRRKYGVQVWMSRHPDLNDYVYQVLLRTRDLIAQGVVRKIIVCFFEEGGQHHVHHKVQPVERIAFEL 686
            G L  F  +    +L +  V P    + +FERR+KY V V M  HPDLN Y+  VL   + L+ +G V+++ +   ++        K QP+ER  FE+
Sbjct:   17 GVLCEFLEVAFHLILYVREVYP----SVVFERRKKYNVPVQMCCHPDLNQYILDVLQTIKPLLEKGDVQRVSLVISDK--------KFQPIERFVFEI 102
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BLAST of mRNA_H-elongata_contig54559.12841.1 vs. uniprot
Match: UPI0009E3ED0F (mitotic spindle assembly checkpoint protein MAD2B-like isoform X1 n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E3ED0F)

HSP 1 Score: 58.5 bits (140), Expect = 4.590e-6
Identity = 37/115 (32.17%), Postives = 56/115 (48.70%), Query Frame = 3 
Query:  393 GFLVGFFLLL*SPLLRITSVSPPSSKAAIFERRRKYGVQVWMSRHPDLNDYVYQVLLRTRDLIAQGVVRKIIVCFFEEGGQHHVHHKVQPVERIAFELRMYQCNPGRVAACIEAD 737
            G L  F  +    +L +  V PP     +FERR+KY V V M  HPDLN Y+  VL   + L+ +G V+++++    +        K  P+ER  FE+     NP  ++A    D
Sbjct:   19 GVLCEFLEVAFHLILYVREVYPP----VVFERRKKYNVPVQMCCHPDLNQYILDVLQTAKPLLEKGEVQRVVLVVSNK--------KFIPIERFVFEIG----NPEELSATGSED 117
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BLAST of mRNA_H-elongata_contig54559.12841.1 vs. uniprot
Match: A0A482RNC8_9ARCH (HORMA domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RNC8_9ARCH)

HSP 1 Score: 57.4 bits (137), Expect = 6.860e-6
Identity = 24/54 (44.44%), Postives = 36/54 (66.67%), Query Frame = 3 
Query:  471 AAIFERRRKYGVQVWMSRHPDLNDYVYQVLLRTRDLIAQGVVRKIIVCFFEEGG 632
            A +FERR++YG+ V+MSRHP LN  +++VL  TR  I  G+V  I++   +  G
Sbjct:    5 AEVFERRKEYGIAVFMSRHPGLNASIHEVLFHTRSAICDGLVECIVLVILDATG 58
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BLAST of mRNA_H-elongata_contig54559.12841.1 vs. uniprot
Match: UPI001CF57C0E (mitotic spindle assembly checkpoint protein MAD2B-like n=1 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF57C0E)

HSP 1 Score: 57.4 bits (137), Expect = 1.050e-5
Identity = 33/98 (33.67%), Postives = 51/98 (52.04%), Query Frame = 3 
Query:  393 GFLVGFFLLL*SPLLRITSVSPPSSKAAIFERRRKYGVQVWMSRHPDLNDYVYQVLLRTRDLIAQGVVRKIIVCFFEEGGQHHVHHKVQPVERIAFEL 686
            G L  F  +    +L +  V P    + +FERR+KY V V M  HPDLN Y+  VL   + L+ +G V+++ +   ++        K QP+ER  FE+
Sbjct:   17 GVLCEFLEVAFHLILYVREVYP----SVVFERRKKYNVPVQMCCHPDLNQYILDVLQTIKPLLEKGDVQRVSLVISDK--------KFQPIERFVFEI 102
[Close]
BLAST of mRNA_H-elongata_contig54559.12841.1 vs. uniprot
Match: A0A4P9YCH2_ROZAC (DNA-binding protein n=1 Tax=Rozella allomycis (strain CSF55) TaxID=988480 RepID=A0A4P9YCH2_ROZAC)

HSP 1 Score: 53.9 bits (128), Expect = 1.300e-5
Identity = 28/97 (28.87%), Postives = 51/97 (52.58%), Query Frame = 3 
Query:  396 FLVGFFLLL*SPLLRITSVSPPSSKAAIFERRRKYGVQVWMSRHPDLNDYVYQVLLRTRDLIAQGVVRKIIVCFFEEGGQHHVHHKVQPVERIAFEL 686
            +L  FF  +   LL +  + P +    +F++R+KY V V+MSRHP+LN YV  +LL     +    +RK+++   ++           P+E+  F++
Sbjct:    3 WLNDFFETVIHTLLYVRQIYPQN----LFQKRKKYHVPVYMSRHPELNQYVLSILLALEPWLHDSKLRKLVLVVLDQDTN-------TPIEKFVFQI 88
[Close]
BLAST of mRNA_H-elongata_contig54559.12841.1 vs. uniprot
Match: A0A2B4SF25_STYPI (Mitotic spindle assembly checkpoint protein MAD2B n=1 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4SF25_STYPI)

HSP 1 Score: 57.0 bits (136), Expect = 1.500e-5
Identity = 32/91 (35.16%), Postives = 47/91 (51.65%), Query Frame = 3 
Query:  471 AAIFERRRKYGVQVWMSRHPDLNDYVYQVLLRTRDLIAQGVVRKIIVCFFEEGGQHHVHHKVQPVERIAFELRMYQCNPGRVAACIEADTA 743
            A +FERR+KY V V M  HPDLN Y+  VL   + L+ +G V+++ +   ++        K  PVE+  FE+     NP  V     +D A
Sbjct:   42 AVVFERRKKYNVPVQMCCHPDLNQYILDVLHTMKPLLEKGEVQRVALVISDK--------KFTPVEKFVFEIG----NPEGVDTTASSDNA 120
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig54559.12841.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
A0A6H5KLX5_9PHAE9.100e-3364.86HORMA domain-containing protein n=2 Tax=Ectocarpus... [more]
W7TK13_9STRA6.070e-946.84Mad2 mitotic arrest deficient-like 2 n=1 Tax=Nanno... [more]
A0A835YLW3_9STRA8.890e-848.08HORMA domain protein n=1 Tax=Tribonema minus TaxID... [more]
A0A4D9CXK7_9STRA9.140e-846.84HORMA domain-containing protein n=1 Tax=Nannochlor... [more]
UPI00077A86D84.250e-633.67mitotic spindle assembly checkpoint protein MAD2B-... [more]
UPI0009E3ED0F4.590e-632.17mitotic spindle assembly checkpoint protein MAD2B-... [more]
A0A482RNC8_9ARCH6.860e-644.44HORMA domain-containing protein n=1 Tax=archaeon T... [more]
UPI001CF57C0E1.050e-533.67mitotic spindle assembly checkpoint protein MAD2B-... [more]
A0A4P9YCH2_ROZAC1.300e-528.87DNA-binding protein n=1 Tax=Rozella allomycis (str... [more]
A0A2B4SF25_STYPI1.500e-535.16Mitotic spindle assembly checkpoint protein MAD2B ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig54559contigH-elongata_contig54559:701..3360 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score132.5
Seed ortholog evalue1.6e-28
Seed eggNOG ortholog2880.D7FJL0
Preferred nameMAD2L2
KEGG koko:K02537,ko:K03508,ko:K13728
KEGG Pathwayko01100,ko03460,ko04110,ko04111,ko04113,ko04114,ko04914,ko05100,ko05131,ko05166,map01100,map03460,map04110,map04111,map04113,map04114,map04914,map05100,map05131,map05166
KEGG ModuleM00293
GOsGO:0000002,GO:0000018,GO:0000075,GO:0000122,GO:0000228,GO:0000278,GO:0000724,GO:0000725,GO:0000731,GO:0001085,GO:0001102,GO:0001558,GO:0001932,GO:0001934,GO:0002637,GO:0002639,GO:0002682,GO:0002684,GO:0002694,GO:0002696,GO:0002697,GO:0002699,GO:0002700,GO:0002702,GO:0002703,GO:0002705,GO:0002706,GO:0002708,GO:0002712,GO:0002714,GO:0002819,GO:0002821,GO:0002822,GO:0002824,GO:0002889,GO:0002891,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005657,GO:0005694,GO:0005730,GO:0005737,GO:0005739,GO:0005819,GO:0005829,GO:0005856,GO:0006139,GO:0006259,GO:0006281,GO:0006282,GO:0006301,GO:0006302,GO:0006310,GO:0006355,GO:0006357,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007005,GO:0007010,GO:0007015,GO:0007049,GO:0007088,GO:0007093,GO:0007094,GO:0007154,GO:0007162,GO:0007165,GO:0007346,GO:0008134,GO:0008150,GO:0008152,GO:0008432,GO:0009058,GO:0009059,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009895,GO:0009966,GO:0009968,GO:0009987,GO:0010224,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010562,GO:0010564,GO:0010569,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010639,GO:0010646,GO:0010648,GO:0010717,GO:0010719,GO:0010944,GO:0010948,GO:0010965,GO:0015630,GO:0016035,GO:0016043,GO:0016740,GO:0016772,GO:0016779,GO:0017125,GO:0018130,GO:0019219,GO:0019220,GO:0019222,GO:0019438,GO:0019899,GO:0019900,GO:0019901,GO:0019985,GO:0022402,GO:0022407,GO:0022408,GO:0023051,GO:0023052,GO:0023057,GO:0030029,GO:0030036,GO:0030071,GO:0030111,GO:0030155,GO:0030178,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031396,GO:0031397,GO:0031399,GO:0031400,GO:0031401,GO:0031577,GO:0031974,GO:0031981,GO:0032042,GO:0032268,GO:0032269,GO:0032270,GO:0032991,GO:0033043,GO:0033044,GO:0033045,GO:0033046,GO:0033047,GO:0033048,GO:0033135,GO:0033138,GO:0033554,GO:0033613,GO:0034641,GO:0034645,GO:0034654,GO:0035556,GO:0035861,GO:0040008,GO:0042176,GO:0042177,GO:0042276,GO:0042325,GO:0042327,GO:0042575,GO:0042770,GO:0042772,GO:0043085,GO:0043086,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043392,GO:0043433,GO:0043504,GO:0043596,GO:0044092,GO:0044093,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044454,GO:0044464,GO:0045191,GO:0045595,GO:0045596,GO:0045738,GO:0045739,GO:0045786,GO:0045830,GO:0045839,GO:0045841,GO:0045892,GO:0045893,GO:0045910,GO:0045911,GO:0045930,GO:0045934,GO:0045935,GO:0045937,GO:0046483,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048585,GO:0050776,GO:0050778,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050864,GO:0050865,GO:0050867,GO:0050871,GO:0050896,GO:0051052,GO:0051053,GO:0051054,GO:0051090,GO:0051093,GO:0051094,GO:0051098,GO:0051100,GO:0051101,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051239,GO:0051240,GO:0051241,GO:0051246,GO:0051247,GO:0051248,GO:0051249,GO:0051251,GO:0051252,GO:0051253,GO:0051254,GO:0051338,GO:0051339,GO:0051348,GO:0051349,GO:0051438,GO:0051444,GO:0051716,GO:0051726,GO:0051783,GO:0051784,GO:0051983,GO:0051985,GO:0060255,GO:0060828,GO:0061695,GO:0065007,GO:0065009,GO:0070013,GO:0070987,GO:0071173,GO:0071174,GO:0071704,GO:0071840,GO:0071897,GO:0080090,GO:0080134,GO:0080135,GO:0090090,GO:0090304,GO:0090734,GO:0097435,GO:1901360,GO:1901362,GO:1901576,GO:1901987,GO:1901988,GO:1901990,GO:1901991,GO:1902099,GO:1902100,GO:1902494,GO:1902679,GO:1902680,GO:1903047,GO:1903320,GO:1903321,GO:1903506,GO:1903507,GO:1903508,GO:1904666,GO:1904667,GO:1905818,GO:1905819,GO:1990234,GO:2000026,GO:2000042,GO:2000047,GO:2000048,GO:2000112,GO:2000113,GO:2000677,GO:2000678,GO:2000779,GO:2000780,GO:2000781,GO:2000816,GO:2001020,GO:2001021,GO:2001022,GO:2001032,GO:2001034,GO:2001141,GO:2001251
EggNOG free text desc.negative regulation of ubiquitin protein ligase activity
EggNOG OGsKOG3186@1,KOG3186@2759
EC2.7.7.7
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03036,ko03400
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionHORMA domain protein
Ec32 orthologEc-04_006500.1
Exons5
Model size1581
Cds size438
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930888.7668133-UTR-H-elongata_contig54559:700..12541622930888.7668133-UTR-H-elongata_contig54559:700..1254Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig54559 701..1254 +
1691679612.6638448-UTR-H-elongata_contig54559:700..12541691679612.6638448-UTR-H-elongata_contig54559:700..1254Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig54559 701..1254 +
1622930888.7841752-UTR-H-elongata_contig54559:1644..17291622930888.7841752-UTR-H-elongata_contig54559:1644..1729Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig54559 1645..1729 +
1691679612.683378-UTR-H-elongata_contig54559:1644..17291691679612.683378-UTR-H-elongata_contig54559:1644..1729Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig54559 1645..1729 +
1622930888.843252-UTR-H-elongata_contig54559:2729..27401622930888.843252-UTR-H-elongata_contig54559:2729..2740Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig54559 2730..2740 +
1691679612.7351053-UTR-H-elongata_contig54559:2729..27401691679612.7351053-UTR-H-elongata_contig54559:2729..2740Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig54559 2730..2740 +
1622930888.8632164-UTR-H-elongata_contig54559:2867..33601622930888.8632164-UTR-H-elongata_contig54559:2867..3360Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig54559 2868..3360 +
1691679612.7457483-UTR-H-elongata_contig54559:2867..33601691679612.7457483-UTR-H-elongata_contig54559:2867..3360Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig54559 2868..3360 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930888.8036695-CDS-H-elongata_contig54559:1729..18371622930888.8036695-CDS-H-elongata_contig54559:1729..1837Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig54559 1730..1837 +
1691679612.6991723-CDS-H-elongata_contig54559:1729..18371691679612.6991723-CDS-H-elongata_contig54559:1729..1837Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig54559 1730..1837 +
1622930888.8177524-CDS-H-elongata_contig54559:1996..21371622930888.8177524-CDS-H-elongata_contig54559:1996..2137Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig54559 1997..2137 +
1691679612.7140696-CDS-H-elongata_contig54559:1996..21371691679612.7140696-CDS-H-elongata_contig54559:1996..2137Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig54559 1997..2137 +
1622930888.8293872-CDS-H-elongata_contig54559:2540..27291622930888.8293872-CDS-H-elongata_contig54559:2540..2729Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig54559 2541..2729 +
1691679612.7246075-CDS-H-elongata_contig54559:2540..27291691679612.7246075-CDS-H-elongata_contig54559:2540..2729Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig54559 2541..2729 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig54559.12841.1prot_H-elongata_contig54559.12841.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig54559 1730..2729 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig54559.12841.1

>prot_H-elongata_contig54559.12841.1 ID=prot_H-elongata_contig54559.12841.1|Name=mRNA_H-elongata_contig54559.12841.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=146bp
MYITKYNQSRESLSNCECTNAIQGGWQPASKLTPPEELEDQLRSALLQIG
KSSAHLPPRHGCTFALHVEAQEGAQGEGSDDNKDRNEASLVRSALQGGNW
LLADDGAQRVQAESGQRRLVPIKSVRGPGLRLDLSAEMGDCYFDS*
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mRNA from alignment at H-elongata_contig54559:701..3360+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig54559.12841.1 ID=mRNA_H-elongata_contig54559.12841.1|Name=mRNA_H-elongata_contig54559.12841.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2660bp|location=Sequence derived from alignment at H-elongata_contig54559:701..3360+ (Himanthalia elongata Himel1 dioecious)
CAGCACCGCACCGGACCCAGGTGGTCAAGGTGGTCAAAGTGGTGAAAGTA
ATATGTATCATCAATTGTACAAGAGTCCTGCCTTCGAACTTTGGTGAAAA
AATGTGGTTGCAGGTGGGATCGGTAATCTAATATTCATAGGTAAAAGCAG
AAGGTGGTATTTATTTTTCAATTCGACGAATAAACCTCGCCAACATTAGG
CCAAGGCCAGAGCGCCCATGGTTTCGAACTCTATTTTTCGACCAACGGCA
GGATATGTCTTAAATCCCATTACAGCTTAATACAAAACGGTAGATGTTCG
ACCATTAGTTCATTTTCACTCTATACTTTGTACAGGGCCCTTTCATTATA
TTCAACACTTCTTGTGTAAGACCCAGCTTTTGTACAGGTGAAGGGTTTTT
AGTCGGGTTTTTTCTCCTACTTTGATCGCCGCTGCTCCGTATCACTTCCG
TATCACCTCCGTCCTCGAAAGCAGCAATCTTCGAACGCCGCCGCAAGTAT
GGCGTACAAGTGTGGATGAGTCGACATCCGGATCTGAACGACTACGTATA
TCAGGTGCAATTCCCCCTAATACCTTTCAATGATTTGAATGATACTATAT
AAATAATATAATTTCGAGAATAACCACTCGTGATAGCGATAGCGATGACC
CACTTGGTCAAGGGGATACATGGTATTAATATATACTAAAAACTATATAC
TAAATACTATATTGACCAAAGTAAAACTGAAGCTATACCGTTCACAGGCG
TGCCGCAATCATAACTAACCATCACTAATTCCTTCTTCACGACGTAATAC
GATAGAGTATTCGTAATAGTAATAGTACAGTAATGCATTTGCATCAAGTG
TCGCAGATCGAAATGATATGACGACGTCAACGTTCGAAATGCATCCATGA
CCACAGCCTCGTGCCCGCTACTGGGTCCGATGATCATCGACTAGGTTCTA
CTCCGGACGAGGGATCTTATTGCTCAGGGGGTTGTCCGAAAAATTATCGT
ATGTTTCTTCGAGGAAGGTGGACAACACCATGTACATCACAAAGTACAAC
CAGTCGAGAGAATCGCTTTCGAACTGCGAATGTACCAATGCAATCCAGGG
AGGGTGGCAGCCTGCATCGAAGCTGACACCGCCAGAGGTCAGGATGACTC
AGTGGATCAAAACAGTTTCCAGGTGTGCACATGATTCCTTTGGTAAGAAC
GATACAGCCTCTAGATCTAACGGGACGATACATTACATGTGACTTCTCAT
CTCAGTAATTTGTCTGATCCAAATTTTCCCTTCTTTTAACCTGCAGGAGC
TTGAAGATCAACTTCGCTCTGCACTTCTCCAAATCGGAAAGTCTTCGGCA
CATCTGCCGCCGCGCCATGGGTGTACATTCGCCTTACACGTCGAGGCCCA
GGAGGGGGCACAAGGCGAAGGGAGCGATGATAATAAGGTGGGTATTTAGT
AATAAAAGTTCGCTTTGAGAGTGTATCACGATGACGTGTTAACACCCACA
AACGCTCGTCGGGGCGTTCGTGAAGAAGAACTTACGCGATACGTGCTTGG
TTGTTGCTCAGCCATGCACTTCTGGTGGCACTCTTTTCTCTGTCTGCGAC
AACCGTAGATATTTGATATTCAGGCCAATGCGTTCACGTTCTTCGTAAGC
TATAAATTATGCGAACGGAGATGGGATTTTGAGGACACACCTTGGCGCAT
AAATATTATCGTGCTTTATGTGTCAACGTCGGTCGCCCAGCGTTTATTAC
AACTCAAAGGTTTGTATTGCAATTCAAACGGCGTTTGTTTTCAATTCAAA
ATATACCTATCCATCTGCTAAACATATCGACCTTATCTAGGATCGCAACG
AGGCGTCGTTGGTGAGATCAGCGTTGCAAGGGGGCAACTGGCTCCTGGCG
GATGACGGAGCGCAAAGGGTTCAGGCGGAGTCAGGACAACGACGCCTGGT
ACCTATAAAGTCCGTCCGAGGCCCGGGTCTAAGGCTAGATTTGTCTGCCG
AGATGGGAGACTGCTACTTCGATAGCTAAACGTAAAACCAATGCCAGATA
TAAAACATGCCACTTTTACTTTTATCTTGAATACCTTTTAAAAGTTCCTG
GCTCGATAGAGGATATACCTGGTATATCTTATGGCGACAGTCTCTGTCGC
ATTTTTGACTGCATGTCATTTGCCACACTTTTTTTTAGCCTTTGGTTTTA
AGGCCAAATTAACTGAAATCCGTGTTCGTACTATTGATATTAAGACTTGA
ATCTGTTTGTAGTAATAATATTGTAGTGTATCCGTTTTGCCTATTAAATA
CAGTACTAAATACCAATACCATGTACAGCAAAATGTTATTTGTAACATAC
TATAATAATGTCTTTGTGATCCAGCATCCAGTGGTTGGTAGCTCGTACAA
ATCTAGATAAAAACCGTAGTCTTCTGTAGGCGAGCCTGCTTGCGTTGCTC
TGAACGGAATGTCTTGGCAGAGTTCGCCTTGACGGCTTTCCGATTCGGCA
CGGAACCTTCGGTGGACTCTGCTTGCAGGCGGTAGCAGCGGTTCAGTCAA
ATATAAGCGGTTTATTAAACGCTCTTATTTGGTGAGTGTCGTTGACATAA
GGACATAATGACGTTCTTTAGTGCCTGAGAGATGTACTGTCCACCAGCCG
CCTGAGCGAC
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Coding sequence (CDS) from alignment at H-elongata_contig54559:701..3360+

>mRNA_H-elongata_contig54559.12841.1 ID=mRNA_H-elongata_contig54559.12841.1|Name=mRNA_H-elongata_contig54559.12841.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=876bp|location=Sequence derived from alignment at H-elongata_contig54559:701..3360+ (Himanthalia elongata Himel1 dioecious)
ATGTACATCACAAAGTACAACCAGTCGAGAGAATCGCTTTCGAACTGCGA
ATGTACCAATGCAATCCAGGGAGGGTGGCAGCCTGCATCGAAGCTGACAC
CGCCAGAGATGTACATCACAAAGTACAACCAGTCGAGAGAATCGCTTTCG
AACTGCGAATGTACCAATGCAATCCAGGGAGGGTGGCAGCCTGCATCGAA
GCTGACACCGCCAGAGGAGCTTGAAGATCAACTTCGCTCTGCACTTCTCC
AAATCGGAAAGTCTTCGGCACATCTGCCGCCGCGCCATGGGTGTACATTC
GCCTTACACGTCGAGGCCCAGGAGGGGGCACAAGGCGAAGGGAGCGATGA
TAATAAGGAGCTTGAAGATCAACTTCGCTCTGCACTTCTCCAAATCGGAA
AGTCTTCGGCACATCTGCCGCCGCGCCATGGGTGTACATTCGCCTTACAC
GTCGAGGCCCAGGAGGGGGCACAAGGCGAAGGGAGCGATGATAATAAGGA
TCGCAACGAGGCGTCGTTGGTGAGATCAGCGTTGCAAGGGGGCAACTGGC
TCCTGGCGGATGACGGAGCGCAAAGGGTTCAGGCGGAGTCAGGACAACGA
CGCCTGGTACCTATAAAGTCCGTCCGAGGCCCGGGTCTAAGGCTAGATTT
GTCTGCCGAGATGGGAGACTGCTACTTCGATAGCTAAGATCGCAACGAGG
CGTCGTTGGTGAGATCAGCGTTGCAAGGGGGCAACTGGCTCCTGGCGGAT
GACGGAGCGCAAAGGGTTCAGGCGGAGTCAGGACAACGACGCCTGGTACC
TATAAAGTCCGTCCGAGGCCCGGGTCTAAGGCTAGATTTGTCTGCCGAGA
TGGGAGACTGCTACTTCGATAGCTAA
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