mRNA_H-elongata_contig54550.12839.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig54550.12839.1 vs. uniprot
Match: D8LT60_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LT60_ECTSI) HSP 1 Score: 323 bits (827), Expect = 1.190e-98 Identity = 227/620 (36.61%), Postives = 264/620 (42.58%), Query Frame = 1
Query: 4 AGITAGAFIQMIYLKTVAPGISGGDAGELLAESCQLGTAHPPGYPLFTVLNHVTIKTLPSLLEAINITLRPGAAVDGRASPAWCANATASVMGTLAAVFTAQTTGLLCSEGYRASHRARPDVLNAVFRWIASGCAAMLMAFSPLFWHYSVTAEVFALNNFLLSLLCSLAMRFSLNRELRYATTGALVSGLALSNQHTAVLYVAPFSLWVVVQLVTSRCR-FHAAH----------------VWRRLAVDYLTLVVFFMLGLVPYAYLPLAAIHAPRPGSWGDVTTLRGLWHHLRRGDYGSFRLYSGKPGGVGRQGL----VERLKSWLWDISYVQGLGGVIPMLALLGILS----------------------------------------------------SALRHVFSSKF---------------SPR-----------------------KTTDTKE----------------------------SSWDDGGFSAPMALLVALVLYLIVFHWHSNMPLDKPLFFGIHARFWMQPNIIVFAFSGVGIFWVFRVARRWFGGAVGLSSAIVALVGLVGAQLWRGFEAGDQSGAAYFSNYAKAVLDPLPPSSILLINND 1446
AG+ G +YL TVAPGI GGDAGEL+AESC LGTAHPPG GALVSGLALSNQHTAVLYVAP + WV++QLVTSRCR +H H WRRL+++ L F+LGL PYA+LPLAA AP+ GSWG+VTT G HH+RRGDYGS RLYSGK GG +GL ERL SW D+S VQGLGGV+P LA+LG+LS S L SS+ SPR +T +KE +SWDD GFSAP ALL ALVLYL+VFHW SNMPLD PL FG+HARFWMQPNI+VF F GVG++ F + RRW G +G A +A +GLV QL RG+ AGDQ GA +FS+YA+AVL PLPP SI LINND
Sbjct: 27 AGLLVGTCAFGVYLATVAPGIPGGDAGELVAESCHLGTAHPPG--------------------------------------------------------------------------------------------------------------------------------------------GALVSGLALSNQHTAVLYVAPLAAWVMLQLVTSRCRQYHTTHQQRQQQGXXXXXXXXXXWRRLSLETTLLAAVFLLGLAPYAFLPLAAKRAPKRGSWGNVTTWSGFLHHIRRGDYGSLRLYSGKAGGSSGKGLGRDCAERLLSWFDDLSSVQGLGGVVPALAVLGVLSLLVFIPSRERGREGEGEMRIDIVAGTTSSKGLMVEFFSGALVAPSSGSRTVCSELASSLSSRTKKGIRRRSKKTSCAASPRPASTAGTRSKDETERGSSTGSTWNSTGSKEKQQQNTAKHNDSPVSRKVTSCSTVVGVLASWDDTGFSAPAALLAALVLYLVVFHWLSNMPLDDPLLFGVHARFWMQPNIVVFVFCGVGMYQTFDLVRRWLGQGIGTMLATMACIGLVREQLARGYAAGDQRGATHFSSYARAVLGPLPPRSIFLINND 506
BLAST of mRNA_H-elongata_contig54550.12839.1 vs. uniprot
Match: K3WD47_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WD47_GLOUD) HSP 1 Score: 282 bits (721), Expect = 7.470e-83 Identity = 193/493 (39.15%), Postives = 267/493 (54.16%), Query Frame = 1
Query: 22 AFIQMIYLKTVAPGISGGDAGELLAESCQLGTAHPPGYPLFTVLNHVTIKTLPSLLEAINITLRPGAAVDGRASPAWCANATASVMGTLAAVFTAQTTGLLCSEGYRASHRARPDVLNAVFRWIASGCAAMLMAFSPLFWHYSVTAEVFALNNFLLSLLCSLAMRFSLNRELRYATTGALVSGLALSNQHTAVLYVAPFSLWVVVQLVTSRCRFHAAHVW-RRLAV---DYLTLVVFFMLGLVPYAYLPLAAIHAPRPGSWGDVTTLRGLWHHLRRGDYGSFRLYSGKPGGVGRQGLVERLKSWLWDISYVQGLGGVIPMLALLGILSSALRHVFSSKFSPRKTTDTKESSWDDGGFSAPMALLVALVLYLIVFHWHSNMPLDKPLFFGIHARFWMQPNIIVFAFSGVGIFWVFRVARRWF----------GGAVGLSSAIVAL----VGLVGAQLWRGFEAGDQSGAAYFSNYAKAVLDPLPPSSILLINND 1446
A + +Y+KT+ P ++GGD+GEL+AESC LG +HPPGYPLF + H + L SLL T + AW AN +++ TLAAV AS R A+ AA L A SPL W Y+V AEVFALNN +LL L +R+ R L+ AT GA VSGLAL NQHT VL+ P WV+ W RRL + + + L V F++GL+PYAY+P+ P+PGSWGDVTTL G +HH+RRGDYG+FRL+S + L RL + D+S + IP+ L + SAL + S + SP+K T KE+ + +A LL Y+IVFH +N+PL + L +G+H RFW QPN++VF + G+G+ + +A + GG + +V L + LVG Q+ +E DQS A Y +YA+A+LDPLP ++L++N D
Sbjct: 50 ALVLGVYVKTLYPSVAGGDSGELVAESCHLGVSHPPGYPLFNMAVHTFVNVL-SLLPWWTAT-----------TVAWRANLFSAICDTLAAVM------------IYASILHYAQASTDATRHTAAFSAAALFALSPLTWTYAVGAEVFALNNLFAALLVYLLLRYDTTRRLQDATMGAFVSGLALCNQHTIVLFELPIVAWVL---------------WTRRLTLGGRELVQLSVAFIVGLLPYAYMPITMSLNPQPGSWGDVTTLSGFFHHVRRGDYGTFRLFSTNDA---HEDLWTRLYLYAADLSSRE-----IPLH--LAVPISALGLLVSLR-SPKKQTTMKEARGNAA--AAGRLLLFTYAFYMIVFHSLANLPLSEGLTYGVHMRFWQQPNVVVFLWFGIGLDQILVIATKVLVTCCGNSESCGGRIAQMLVLVLLYALCLSLVGLQIATWYELCDQSQAFYIRDYARALLDPLPKDAVLIVNFD 490
BLAST of mRNA_H-elongata_contig54550.12839.1 vs. uniprot
Match: A0A8K1CL83_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CL83_PYTOL) HSP 1 Score: 279 bits (713), Expect = 1.090e-81 Identity = 174/473 (36.79%), Postives = 260/473 (54.97%), Query Frame = 1
Query: 28 IQMIYLKTVAPGISGGDAGELLAESCQLGTAHPPGYPLFTVLNHVTIKTLPSLLEAINITLRPGAAVDGRASPAWCANATASVMGTLAAVFTAQTTGLLCSEGYRASHRARPDVLNAVFRWIASGCAAMLMAFSPLFWHYSVTAEVFALNNFLLSLLCSLAMRFSLNRELRYATTGALVSGLALSNQHTAVLYVAPFSLWVVVQLVTSRCRFHAAHVWRRLAVDYLTLVVFFMLGLVPYAYLPLAAIHAPRPGSWGDVTTLRGLWHHLRRGDYGSFRLYSGKPGGVGRQGLVERLKSWLWDISYVQGLGGVIPMLALLGILSSALRHVFSSKFSPRKTTDTKESSWDDGGFSAPMALLVALVLYLIVFHWHSNMPLDKPLFFGIHARFWMQPNIIVFAFSGVGIFWVFRVARRWFGGAVGLSSAIVALVGLVGAQLWRGFEAGDQSGAAYFSNYAKAVLDPLPPSSILLINND 1446
+ +Y++T+ P ++GGD+GEL+AESC LG +HPPGYPLF +L + LP + S AW AN ++ LA +F ++ L S L+A R A+ A+ + AFSPL W Y++ AEVFALNN + L + +++S+NR L A GA + GLAL NQHT +L+ P LWV T R + +W+ L + L F +GL+PYAY+P+ A P+ GSWGDV+T+ G HHLRR DYG+F+L+S +GL RL+ + D+S + ++ LA +G++S+ F+S T + S D + + V Y++VFH +N+PL + L +G+H RFW QPN+IVF + G+G+ + + R G GL+ +++ +GLV QLW +E DQS Y NYA A++DPLP ++L +N D
Sbjct: 61 VMTVYVRTLYPSVAGGDSGELVAESCHLGVSHPPGYPLFNMLVYAVTALLPI-----------------QRSKAWKANLFSAGCDALAVLFMYRSILLWSSS----------KSLHA--RKTAAFTASAMFAFSPLIWTYALGAEVFALNNLFAAALVHVLLQYSINRTLTKALQGAFLCGLALCNQHTIILFEIPIVLWV---FWTRR----STLLWKELGL----LASAFFVGLLPYAYMPIVANWNPQAGSWGDVSTIFGFIHHLRRADYGTFKLFSTNAA---TEGLWTRLQLYAKDLSSREVPFHLVAPLAAIGLISTLSGRFFTS-------TSITKRSLDASTNNIGSLIGTTYVFYVVVFHSLANLPLSEGLTYGVHMRFWQQPNVIVFLWIGIGLSRLLDLVFRHLGHVAGLTGSVLT-IGLVVVQLWTWYEFCDQSNGWYIHNYAAALIDPLPQHAVLFVNFD 482
BLAST of mRNA_H-elongata_contig54550.12839.1 vs. uniprot
Match: A0A485LIS4_9STRA (Aste57867_21899 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LIS4_9STRA) HSP 1 Score: 276 bits (706), Expect = 2.370e-81 Identity = 182/481 (37.84%), Postives = 257/481 (53.43%), Query Frame = 1
Query: 13 TAGAFIQMIYLKTVAPGISGGDAGELLAESCQLGTAHPPGYPLFTVLNHVTIKTLPSLLEAINITLRPGAAVDGRASPAWCANATASVMGTLAAVFTAQTTGLLCSEGYRASHRARPDVLNAVFRWIASGCAAMLMAFSPLFWHYSVTAEVFALNNFLLSLLCSLAMRFSLNRELRYATTGALVSGLALSNQHTAVLYVAPFSLWVVVQLVTSR--CRFHAAHVWRRLAVDYLTLVVFFMLGLVPYAYLPLAAIHAPRPGSWGDVTTLRGLWHHLRRGDYGSFRLYSGKPGGVGRQGLVERLKSWLWDISYVQGLGGVIPMLALLGILSSALRHVFSSKFSPRKTTDTKESSWDDGGFSAPMALLVALVLYLIVFHWHSNMPLDKPLFFGIHARFWMQPNIIVFAFSGVGIFWVFRVARRWFGGAVGLSSAIVALVGLVG-AQLWRGFEAGDQSGAAYFSNYAKAVLDPLPPSSILLINND 1446
T GA + +Y +T+ P I+GGD+GEL+AESC LG +HPPGYPLF +LN++ + + G + AW AN F+A C Y RP + + IA+ A+M AFSPL W Y+++AEVFALNN +LL +R++ + + GA VSGLAL NQHT VL+ AP LWV L T R FHA L +F+LGL+PY Y+PLA+ P+PGSWGDVT+L G +HHLRRGDYG+FRL++ + L RL + D ++V+ V+ LAL+G+ L + SS D GF ++ YL+VFH SN+PL + L +G+H RFW QPN+++F + GVG+ + R G +G ++A++AL W + G+QS A Y NYAKA+LD LP ++++ +N D
Sbjct: 40 TVGAVVLGVYSQTLYPSIAGGDSGELVAESCHLGISHPPGYPLFNMLNYLVVN------------------MPGEQTKAWKAN-----------FFSAVCDTACCMLMYATIVSWRPSEYPWLTK-IAAATASMSFAFSPLIWTYAISAEVFALNNLFAALLLFTLLRYAQSGTWFHVCQGAFVSGLALCNQHTIVLFEAPIVLWV---LWTQRRNLTFHAVG----------QLAFYFVLGLLPYTYMPLASYWNPQPGSWGDVTSLGGFFHHLRRGDYGTFRLFATDRV---TESLATRLSLYFHD-AFVREGAYVLAPLALIGMTQRPL---------------ARSSSLDSVGF----VVVFVYAFYLVVFHSLSNLPLTEGLLYGVHMRFWQQPNVVLFVWGGVGLSALLRRVHASSKG-LGCAAAMLALAAAASQGATW--YPLGNQSQAWYIHNYAKALLDSLPQNALVFVNYD 451
BLAST of mRNA_H-elongata_contig54550.12839.1 vs. uniprot
Match: A0A329RL06_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329RL06_9STRA) HSP 1 Score: 277 bits (708), Expect = 2.900e-81 Identity = 176/476 (36.97%), Postives = 255/476 (53.57%), Query Frame = 1
Query: 40 YLKTVAPGISGGDAGELLAESCQLGTAHPPGYPLFTVLNHVTIKTLPSLLEAINITLRPGAAVDGRASPAWCANATASVMGTLAAVFTAQTT-GLLCSEGYRASHRARPDVLNAVFRWIASGCAAMLMAFSPLFWHYSVTAEVFALNNFLLSLLCSLAMRFSLNRELRYATTGALVSGLALSNQHTAVLYVAPFSLWVVVQLVTSRCRFHAAHVWRRLAVDYLTLVVFFMLGLVPYAYLPLAAIHAPRPGSWGDVTTLRGLWHHLRRGDYGSFRLYSGKPGGVGRQGLVERLKSWLWDISYVQGLGGVIPMLALLGILSSALRHVFSSKFSPRKTTDTKESSWDDGGFSAPMALLVALVLYLIVFHWHSNMPLDKPLFFGIHARFWMQPNIIVFAFSGVGIFWVFRVARRWFGGAVGLSSAIVALV------GLVGAQLWRGFEAGDQSGAAYFSNYAKAVLDPLPPSSILLINND 1446
Y T+ P I+GGD+GEL+AESC LG +HPPGYPLF ++ H+ + LP +PAW AN ++V T+A F Q+ + G+ R +A+ AA L FSPL W Y+V AEVFALNN ++L L ++++ R+++ A GA GLA NQHT VL+ P WV+ SR R +WR+ ++ F+LGL PY Y+P+ AI P+PGSWGDVTTL GL HH+RR DYG+FRLY+ + L RL + D+S + IP + ++ + + T ++ W L+ Y+IVFH +N+P+ + L +G+ RFW QPN++VF + GVG+ +V + GG + ++V+L+ LVGAQ+WR +E DQS A Y NYA+A+LDPLPP+++L +N D
Sbjct: 54 YTVTLYPSIAGGDSGELVAESCHLGVSHPPGYPLFNMIVHLFTQYLPF-----------------GDTPAWRANFFSAVCDTVAVGFIYQSLLQWMAPTGWTG-------------RRVAAFTAAALFGFSPLIWTYAVGAEVFALNNAFAAVLVFLLLQYARRRDIKSALAGAFTCGLATCNQHTIVLFELPIIAWVL----WSRRR----SLWRK---EFAQFTGAFVLGLTPYIYMPITAIWNPQPGSWGDVTTLSGLIHHIRRADYGTFRLYASNEA---NEDLWTRLYLYGVDLSDRE-----IPFQLAVPVVGLGMLQTLRAS-----TGMNRQLGW---------FLIAMYAFYMIVFHSLANLPISEGLIYGVQMRFWQQPNVVVFIWFGVGLGYVVNLVTEGVGGTSRVIKSVVSLMLQVACLALVGAQIWRWYELCDQSQAFYIRNYAQALLDPLPPNAVLFVNFD 466
BLAST of mRNA_H-elongata_contig54550.12839.1 vs. uniprot
Match: W4GJ01_9STRA (Uncharacterized protein n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GJ01_9STRA) HSP 1 Score: 275 bits (704), Expect = 7.140e-81 Identity = 176/478 (36.82%), Postives = 262/478 (54.81%), Query Frame = 1
Query: 19 GAFIQMIYLKTVAPGISGGDAGELLAESCQLGTAHPPGYPLFTVLNHVTIKTLPSLLEAINITLRPGAAVDGRASPAWCANATASVMGTLAAVFTAQTTGLLCSEGYRASHRARPDVLNAVFRWIASGCAAMLMAFSPLFWHYSVTAEVFALNNFLLSLLCSLAMRFSLNRELRYATTGALVSGLALSNQHTAVLYVAPFSLWVVVQLVTSRCRFHAAHVWRRLAVDYL-TLVVFFMLGLVPYAYLPLAAIHAPRPGSWGDVTTLRGLWHHLRRGDYGSFRLYSGKPGGVGRQGLVERLKSWLWDISYVQGLGGVIPMLALLGILSSALRHVFSSKFSPRKTTDTKESSWDDGGFSAPMALLVALVLYLIVFHWHSNMPLDKPLFFGIHARFWMQPNIIVFAFSGVGIFWVFRVARRWFGGAVGLSSAIVALVGLVGAQL-WRGFEAGDQSGAAYFSNYAKAVLDPLPPSSILLINND 1446
G+ + +Y +T+ P I+GGD+GEL+AESC LG +HPPGYPLF +LN++ + + G + AW AN ++V T+ +F T + + A +A +A+ A++ A SPL W Y+++AEVFALNN + L L + ++ + + YA GA V GLA+ NQHT VL+ P L+V L T R R L + L T ++F++GL+PYAY+PL ++ P+PGSWGDVTT+ G +HH+RRGDYG+FRL+S + L R+ + D QG G ++ LA+ G+++ T S+ GF +A + YLIVFH SNMPL + L +G+H RFW QPNII+F + GVG+ V + A R G ++++ +VG + W+ G+QS A + NYAKA+LDPLPP +++ +N D
Sbjct: 42 GSAVLGVYSQTIYPSIAGGDSGELVAESCHLGVSHPPGYPLFNMLNYLVVN------------------MPGAQTKAWKANLFSAVCDTICCMFMYATI-------LKWTSPASSSTASAWLTKVAAATASITFALSPLIWTYAISAEVFALNNLFAAWLLFLLLSYAQSGSVYYANLGAFVCGLAMCNQHTIVLFEIPVVLYV---LWTQR---------RSLGMKTLSTYALYFVVGLLPYAYMPLTSLWNPQPGSWGDVTTVAGFFHHIRRGDYGTFRLFSTDRD---TESLTTRMILYFQDALTRQG-GYILGPLAVAGLVT------------------TPPSAPRVAGFRWAVAFMYTF--YLIVFHALSNMPLTEGLLYGVHMRFWQQPNIILFVWGGVGLDAVLQRAWRTSGAVAAGLGVVLSVAAMVGQGMTWQ--HVGNQSHAWFIPNYAKALLDPLPPHALVFVNYD 456
BLAST of mRNA_H-elongata_contig54550.12839.1 vs. uniprot
Match: F0WKB4_9STRA (Uncharacterized protein AlNc14C131G6967 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WKB4_9STRA) HSP 1 Score: 276 bits (706), Expect = 1.110e-80 Identity = 176/481 (36.59%), Postives = 274/481 (56.96%), Query Frame = 1
Query: 28 IQMIYLKTVAPGISGGDAGELLAESCQLGTAHPPGYPLFTVLNHVTIKTLPSLLEAINITLRPGAAVDGRASPAWCANATASVMGTLAAVFTAQTTGLLCSEGYRASHRARPDVLNAVFRWIASGCAAMLMAFSPLFWHYSVTAEVFALNNFLLSLLCSLAMRFSLNRELRYATTGALVSGLALSNQHTAVLYVAPFSLWVV-----VQLVTSRCRFHAAHVWRRLAVDYLTLVVFFMLGLVPYAYLPLAAIHAPRPGSWGDVTTLRGLWHHLRRGDYGSFRLYSGKPGGVGRQGLVERLKSWLWDISYVQGLGGVIPMLALLGILSSALRHVFSSKFSPRKTTDTKESSWDDGGFSAPMALLVAL--VLYLIVFHWHSNMPLDKPLFFGIHARFWMQPNIIVFAFSGVGIFWVFRVARRWFGGAVGLSSAI-VALVGLVGAQLWRGFEAGDQSGAAYFSNYAKAVLDPLPPSSILLINND 1446
+ +Y+ T+ P I GGD+GEL+AESC LG AHPPGYPL+ +++H ++++ LE++++ + SPA AN+ +++ T +F ++ + + + R ++ A+ AA L AFSPL W Y+V+AEVFALNN L L + +R+ R A +GA + G+AL NQHT +L P +WV+ V + + R + L+L F+ GL Y YLPL A+ P+PGSWG V++L GLWHHLRRGDYG+FRL+S +G+ +R++ + D+ QGL VIP+ AL+G++SS S R T ++S+ + +ALL+ + + Y++ FH SN+PL++ L +G+H RFW QPNI+VF F G G++ RV + + L++ + + LV QL+R + DQS + Y YA+A+L+PLP +IL++N D
Sbjct: 55 VLSVYMNTLYPSIPGGDSGELVAESCHLGVAHPPGYPLYILIHHACLQSM-RFLESLSVI--------SKISPAVVANSVSALCDTFTTIFLFRSILIWITWPHYDPKRI------PLYAPTAAAIAAGLFAFSPLIWTYAVSAEVFALNNLLAGALLHILVRYGCAPRFRAAISGAFLCGIALCNQHTIILMELPIMVWVLRHRFGVNMQRGKMRLFFN--------ELLSLFAAFVAGLSLYLYLPLTAVWNPQPGSWGHVSSLGGLWHHLRRGDYGTFRLFSTLEA---TEGVWQRIRLYFCDLHTNQGLYVVIPV-ALIGVVSSLCLPQIPKSVSMR--TKAQKSAISECISKRDVALLITVSYICYILGFHALSNLPLNQGLTYGVHMRFWQQPNILVFFFVGEGLW---RVLKSIADHSTRLANVLSLGCTALVLIQLYRWYFLMDQSESWYVRRYARALLNPLPRRAILIVNYD 503
BLAST of mRNA_H-elongata_contig54550.12839.1 vs. uniprot
Match: A0A024G3W1_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G3W1_9STRA) HSP 1 Score: 275 bits (703), Expect = 2.750e-80 Identity = 179/478 (37.45%), Postives = 263/478 (55.02%), Query Frame = 1
Query: 37 IYLKTVAPGISGGDAGELLAESCQLGTAHPPGYPLFTVLNHVTIKTLPSLLEAINITLRPGAAVDGRASPAWCANATASVMGTLAAVFTAQTTGLLCSEGYRASHRARPDVLNAVFRWIASGCAAMLMAFSPLFWHYSVTAEVFALNNFLLSLLCSLAMRFSLNRELRYATTGALVSGLALSNQHTAVLYVAPFSLWVVVQLVTSRCRFHAAHVWRRLAV---DYLTLVVFFMLGLVPYAYLPLAAIHAPRPGSWGDVTTLRGLWHHLRRGDYGSFRLYSGKPGGVGRQGLVERLKSWLWDISYVQGLGGVIPMLALLGILSSALRHVFSSKFSPRKTTDTKESSWDDGGF----SAPMALLVALVLYLIVFHWHSNMPLDKPLFFGIHARFWMQPNIIVFAFSGVGIFWVFRVARRWFGGAVGLSSAI-VALVGLVGAQLWRGFEAGDQSGAAYFSNYAKAVLDPLPPSSILLINND 1446
+Y KT+ P I GGD+GEL+AESC LG AHPPGYPL+ +++H + + L +I PA AN +++ T ++F ++ LL R + P ++ IA+ AA L AFSPL W Y+V AEVFALNN L + L +R+ A +GA +SG+AL NQHT +L P LWV+ R RF +++ D+L+L V F G+ Y YLP+ A P+PGSWG V++L G WHHLRRGDYG+FRL+S +G+ ER++ + D+ QGL +IP LAL+G +SS ++ + + TK G + ++V+ + Y++ FH SN+PL + L +G+H RFW QPNI+VF F G G++ + R A L++ + + +V QL+R + DQS + Y YA+A+LDPLP +IL++N D
Sbjct: 54 VYTKTLYPSIPGGDSGELVAESCHLGVAHPPGYPLYLLIHHACFQCMRFLASLSSI---------ANVHPAVVANFVSALCDTFTSIFLFRSI-LLWISWPRYDSKQLP-----LYAPIAASIAAGLFAFSPLVWTYAVGAEVFALNNLLATALLHTLVRYGCAPRFSTALSGAFISGIALCNQHTIILMELPIMLWVL------RHRFGVLLKRKKIESFLNDFLSLAVAFFAGISLYLYLPITATWNPQPGSWGHVSSLAGFWHHLRRGDYGTFRLFSSLEA---TEGVWERIQLYFCDLHLNQGLYVLIP-LALIGTISS----LYIPRLQTNMSFQTKAHKSVISGLIMKRDVAILIVVSYIFYIVGFHALSNLPLSQGLTYGVHMRFWQQPNILVFFFMGEGLWRILNSIDR----ATQLANIVSLGCTAIVLLQLYRWYFRMDQSESWYVKWYARALLDPLPRRAILIVNYD 498
BLAST of mRNA_H-elongata_contig54550.12839.1 vs. uniprot
Match: A0A225V4Q1_9STRA (Putative membrane protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225V4Q1_9STRA) HSP 1 Score: 274 bits (701), Expect = 3.120e-80 Identity = 186/480 (38.75%), Postives = 253/480 (52.71%), Query Frame = 1
Query: 40 YLKTVAPGISGGDAGELLAESCQLGTAHPPGYPLFTVLNHVTIKTLPSLLEAINITLRPGAAVDGRASPAWCANATASVMGTLAAVFTAQTT-GLLCSEGYRASHRARPDVLNAVFRWIASGCAAMLMAFSPLFWHYSVTAEVFALNNFLLSLLCSLAMRFSLNRELRYATTGALVSGLALSNQHTAVLYVAPFS---LWVVVQLVTSRCRFHAAHVWRRLAVDYLTLVVFFMLGLVPYAYLPLAAIHAPRPGSWGDVTTLRGLWHHLRRGDYGSFRLYSGKPGGVGRQGLVERLKSWLWDISYVQGLGGVIPMLALLGILSSALRHVFSSKFSPRKTTDTKESSWDDGGFSAPMALLVALVLYLIVFHWHSNMPLDKPLFFGIHARFWMQPNIIVFAFSGVGIFWVFRVAR-------RWFGGAVGLSSAIVALVGLVGAQLWRGFEAGDQSGAAYFSNYAKAVLDPLPPSSILLINND 1446
Y T+ P I+GGD+GEL+AESC LG +HPPGYPLF ++ H+ K LP +PAW AN ++V T+A VF + G+ A RA A+ AA L FSPL W Y+V AEVFALNN +LL L ++ ++ + A GA V GLA+ NQHT VL+ P LW Q + W+ A L F LGL+PY Y+P+ AI P+PGSWGDVTTL GL HH+RR DYG+FRLYS G +GL RL + D+S + IP ++S L +FS T + W ++V + Y++VFH +N+P+ + L +G+ RFW QPN+IVFA+ GVG+ ++ + R G + + S I+ L LVGAQ+WR E +QS A Y NYA A+LDPLPP+++L +N D
Sbjct: 47 YTMTLYPSIAGGDSGELVAESCHLGVSHPPGYPLFNMVVHLFTKYLPF-----------------GETPAWRANFFSAVCDTVAVVFIYLILLNWMAPTGW-AGQRA------------AAFTAAALFGFSPLIWTYAVGAEVFALNNAFAALLIFLLQKYLHHQNFKSAIIGAFVCGLAMCNQHTIVLFELPIIACVLWTRKQTLW----------WKEFA----QLTGAFTLGLLPYIYMPITAIWNPQPGSWGDVTTLTGLIHHIRRADYGTFRLYSSNEG---NEGLWTRLYFYCVDLSDRE-----IPYQLAFPVISLGLLQTL--RFS---TEINRHLGW---------FMIVTYLFYMVVFHSLANLPISEGLIYGVQMRFWQQPNVIVFAWFGVGLGYIVNLVTQVIGNYSRKLGVVISIVSRIICLA-LVGAQIWRWHELCNQSQAFYIRNYAHALLDPLPPNAVLFVNFD 459
BLAST of mRNA_H-elongata_contig54550.12839.1 vs. uniprot
Match: A0A2P4XN80_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XN80_9STRA) HSP 1 Score: 268 bits (686), Expect = 4.890e-78 Identity = 179/476 (37.61%), Postives = 252/476 (52.94%), Query Frame = 1
Query: 40 YLKTVAPGISGGDAGELLAESCQLGTAHPPGYPLFTVLNHVTIKTLPSLLEAINITLRPGAAVDGRASPAWCANATASVMGTLAAVFTAQTTGLLCSEGYRASHRARPDVLNAVFRWIASGCAAMLMAFSPLFWHYSVTAEVFALNNFLLSLLCSLAMRFSLNRELRYATTGALVSGLALSNQHTAVLYVAPFSLWVVVQLVTSRCRFHAAHVWRRLAVDYLTLVVFFMLGLVPYAYLPLAAIHAPRPGSWGDVTTLRGLWHHLRRGDYGSFRLYSGKPGGVGRQGLVERLKSWLWDISYVQGLGGVIPMLALLGILSSALRHVFSSKFSPRKTTDTKESSWDDGGFSAPMALLVALVLYLIVFHWHSNMPLDKPLFFGIHARFWMQPNIIVFAFSGVGIFWVFRVARRWFG-------GAVGLSSAIVALVGLVGAQLWRGFEAGDQSGAAYFSNYAKAVLDPLPPSSILLINND 1446
Y T+ P I+GGD+GEL+AESC LG +HPPGYPLF + HV K LP +PAW AN ++V T+A VF LL H P + IA+ AA L FSPL W Y+V AEVFALNN +LL L ++ +++ + A TGA V GLA+ NQHT VL+ P WV L T R +W + ++ F GL+PY Y+P+ AI P+PGSWGDVTTL GL HH+RR DYG+FRLY+ +GL RL ++ D+ L IP + +++ L + + E + G F ++V + Y+++FH +N+P+ + L +G+ RFW QPN++VF + G+G+ ++ + G + I+ LV LVG Q+WR + DQS A Y NYA+A+LDPLPP++IL +N D
Sbjct: 50 YTMTLYPSIAGGDSGELVAESCHLGISHPPGYPLFNMAVHVFTKYLPF-----------------GETPAWRANFFSAVCDTVAVVFIYLI--LL--------HWMAPTGWTG--QRIAAFTAAALFGFSPLIWTYAVGAEVFALNNAFAALLIFLLLQHVRHQDFKSALTGAFVCGLAMCNQHTIVLFEVPIITWV---LWTRR-----QTLWWK---EFAHFTGAFAFGLMPYIYMPITAIWNPQPGSWGDVTTLTGLIHHIRRADYGTFRLYASNEA---NEGLWTRLYLYIVDL-----LDREIPYQLVFPVIALGLLQTLRT---------STEMNHHLGWF-----MVVMYIFYMVIFHSLANLPISEGLIYGVQMRFWQQPNVVVFTWFGIGLGYIVNLITEVVGCYEKALQSVIATIVRIICLV-LVGTQIWRWHKLCDQSQAFYIRNYAQALLDPLPPNAILFVNFD 462 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig54550.12839.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig54550.12839.1 >prot_H-elongata_contig54550.12839.1 ID=prot_H-elongata_contig54550.12839.1|Name=mRNA_H-elongata_contig54550.12839.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=482bp LAGITAGAFIQMIYLKTVAPGISGGDAGELLAESCQLGTAHPPGYPLFTVback to top mRNA from alignment at H-elongata_contig54550:1418..3326+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig54550.12839.1 ID=mRNA_H-elongata_contig54550.12839.1|Name=mRNA_H-elongata_contig54550.12839.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1909bp|location=Sequence derived from alignment at H-elongata_contig54550:1418..3326+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig54550:1418..3326+ >mRNA_H-elongata_contig54550.12839.1 ID=mRNA_H-elongata_contig54550.12839.1|Name=mRNA_H-elongata_contig54550.12839.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2892bp|location=Sequence derived from alignment at H-elongata_contig54550:1418..3326+ (Himanthalia elongata Himel1 dioecious)back to top |