mRNA_H-elongata_contig54420.12822.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig54420.12822.1 vs. uniprot
Match: D7G2H5_ECTSI (TLDc domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2H5_ECTSI) HSP 1 Score: 318 bits (814), Expect = 9.820e-98 Identity = 217/542 (40.04%), Postives = 289/542 (53.32%), Query Frame = 2
Query: 215 LSVGGLYLNVCRSVFESMGQKPVKDWELANLFDVVWDSRVPKDEDGRIFLDESPVILKHLVHTKLEASITTHNSTNVILRDVITPVPLVDHQRPYLHKVARDLRLDT--PFLGMRVKCDSSIVLSTNELEELSVHIRNWCPGDPQDLELIYRASRDGFNANGFHTKCTDYSPSTITLITVNHDDPDSRSSVIGGFFSVSWVPTANKSDGFYMDGCCYGSTYNSKDSPGAFIFMAKNGLARGGEKYQPLHWNLPGGSTGHPAIRCGTQLGPDFGGGGYRVTFTS-------TSQRSCNIFFGENTIITDTMTPFKNLQQKRVSEIEVYLLLYGRRDAASGVSDAPKICSTEGV-----PVYADTVYRGQVNNACLFGASIAGGVLMEERVALSNAEAELLLAKKKVQAAASALASVYGPDIASGKPDPIVELNVWGTRMTTLRSTLQACPESALAARFDDSKWPSDGKDFG-----VIDCNPAIFAKVLDVLRLRKRAKWSQQKRTAKVILSRVVITEGDRASFEEFVDMYFPGCKSFVMDWV 1783
L+VGG +LN R + ++P W L NLF+ VWD R+P+D DGRI LDESP +KHL+H+ +E+S S + D + +V YL VAR L L P GM V + LS E+ EL+ ++ WCPG+P + L+YRASRDG++ FH C + SP+TITL+ V + S++GGF SV W P A D S GAFIFM K+ G +QP+ W + G + G GP FG V F + S ++ G F NL + ++EIEV+ + Y S S KI E +T R ++A FG +IAG LMEER+AL AEAEL A K A+ ALA+VYGP++A G D +VEL+V GTRMTTLRSTLQAC ESALAA F++ KWP KD +I+C+PA+F KVLDVLR+RKRA W+ R L+ V + DR +F+ FV+MYFPG ++F+ D V
Sbjct: 48 LNVGGSHLNFRRCILAGR-KEPSATWALGNLFESVWDDRLPRDSDGRIVLDESPACVKHLIHSLIESSGAAPGS--LPRGDTLALDEMV-----YLPYVARALGLSAYIPRQGMEV-VGGTTSLSHCEVGELTATLQGWCPGNPNTMRLLYRASRDGWSPYPFHASCGNNSPNTITLLRVG-----ASQSIVGGFSSVPWSPHAYGGDSIMS-------------SLGAFIFMLKDSDMGGPNSFQPVKWGKRDNNGGCDVV-VGASRGPYFGRTDLVVNFNNYFPVTLQAQPYSYDVPSGST---------FPNLNGQTITEIEVFQV-YSAAATTSSPSKRLKIQGPEDTHGAVSTSSTNTASREANSDAETFGNAIAGA-LMEERIALHQAEAELEQAHSKAAASGDALAAVYGPEVARGAIDTVVELSVRGTRMTTLRSTLQACRESALAALFNEDKWPPTDKDVDEQGRRLINCSPAVFQKVLDVLRMRKRAAWAASDRE----LAHVRVDAADRPAFDSFVNMYFPGFENFITDMV 546
BLAST of mRNA_H-elongata_contig54420.12822.1 vs. uniprot
Match: A0A6H5LAP0_9PHAE (TLDc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAP0_9PHAE) HSP 1 Score: 317 bits (811), Expect = 5.420e-97 Identity = 209/541 (38.63%), Postives = 288/541 (53.23%), Query Frame = 2
Query: 215 LSVGGLYLNVCRSVFESMGQKPVKDWELANLFDVVWDSRVPKDEDGRIFLDESPVILKHLVHTKLEASITTHNSTNVILRDVITPVPLVDHQRPYLHKVARDLRLDTPF--LGMRVKCDSSIVLSTNELEELSVHIRNWCPGDPQDLELIYRASRDGFNANGFHTKCTDYSPSTITLITVNHDDPDSRSSVIGGFFSVSWVPTA-NKSDGFYMDGCCYGSTYNSKDSPGAFIFMAKNGLARGGEKYQPLHWNLPGGSTGHPAIRCGTQLGPDFGGGGYRVTFTSTSQRSCNIFFGENTIITDTMTPFKNLQQKRVSEIEVYLLLYGRRDAASGVSDAPKICS--TEGVPVYADTVYRGQVNNACL-----------FGASIAGGVLMEERVALSNAEAELLLAKKKVQAAASALASVYGPDIASGKPDPIVELNVWGTRMTTLRSTLQACPESALAARFDDSKWPSDGKDFG-----VIDCNPAIFAKVLDVLRLRKRAKWSQQKRTAKVILSRVVITEGDRASFEEFVDMYFPGCKSFVM 1774
L+VGGL L RSV +S G++ W L NLF+ WD RVP+D DG I LDESP +K LVH L AS ++ + P + LH A L L +GM ++ ++I +E +L+ +++WCPG P LEL+YRASRDG+N F+ +C SPST+TL+ V + S+IGGF SV W P N S G+Y+ G SPGAF+F+ K+ +G + P+ W + G A+ G GP FG +V + + +T + F L + + +IE + ++CS T +P+ G+ N FG IA LME + L +A EL LAK + A A+ALA+VYGPD+ASG+ + +VEL+V GT MTTLRSTL+ CP+SALAARFD+ KWP+ KD +IDC PA+F+KVLDVLR+ KRA W+ + + +RV I GDR +FEEFVDMYF GC+SF+M
Sbjct: 70 LNVGGLLLAFRRSVLDSEGKQQPPTWALGNLFEAEWDKRVPRDSDGHIVLDESPTCVKQLVHRLLTASSSSKATVGRAGDFARNEDPAL------LHYTAGVLGLSGCLAPVGMSIQGGTTI-FEPHETSKLTAVVQDWCPGHPGGLELLYRASRDGWNGATFNARCKGDSPSTVTLLRVKGCETGGTDSIIGGFSSVPWSPAIQNYSYGYYLRG-----------SPGAFVFILKD-EGKGSSTFPPMKWGVKNGLAAK-AVNQG--CGPCFGECDLKVNWNGNMS---TVGTDNSTYDVPAGSHFLQLNGRHLLDIEAF-----------------RVCSKPTHTLPLAKQEHRAGEGTNTPTAPVRTSDDVPTFGQLIADS-LMEAEMVLQDAGIELALAKARTTACATALAAVYGPDVASGQQEDVVELSVRGTAMTTLRSTLRVCPDSALAARFDEGKWPAAKKDLDSDGRRMIDCRPAVFSKVLDVLRIAKRAAWAGGENLQGMKETRVTIKPGDRVAFEEFVDMYFKGCESFIM 567
BLAST of mRNA_H-elongata_contig54420.12822.1 vs. uniprot
Match: D7FIV0_ECTSI (TLDc domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIV0_ECTSI) HSP 1 Score: 301 bits (772), Expect = 1.050e-91 Identity = 208/539 (38.59%), Postives = 286/539 (53.06%), Query Frame = 2
Query: 215 LSVGGLYLNVCRSVFESMGQKPVKDWELANLFD-VVWDSRVPKDEDGRIFLDESPVILKHLVHTKLEASITTHNSTNVILRDVITPVPLVDHQRPYLHKVARDLRLDTPFLGMRVKCDSSIVLSTNELEELSVHIRNWCPGDPQDLELIYRASRDGFNANGFHTKCTDYSPSTITLITVNHDDPDSRSSVIGGFFSVSWVPTANKSDGFYMDGCCYGSTYNSKDSPGAFIFMAKNGLARGGEKYQPLHWNLPGGSTGHPAIRCGTQLGPDFGGGGYRVTFTSTSQRSCNIFFGENTIITDTMTPFKNLQQKRVSEIEVYLLLYGRRDAASGVSDAPKICSTEGVPVYADTVYRG---QVNNACLFGASIAGGVLMEERVALSNAEAELLLAKKKVQAAASALASVYGPDIASGKPDPIVELNVWGTR----MTTLRSTLQACPESALAARFDDSKWPSDGKDFG------VIDCNPAIFAKVLDVLRLRKRAKWSQQ--KRTAKVILSRVVITEGDRASFEEFVDMYFPGCKSFVMDWV 1783
L+VGGL +N+ RSV G+ W L +LF+ VWD R+P+ EDGRI LDESPV ++ L+ +AS ++N D ++PY+ VA L LD LGM V S L +E E L+ I WCPG P+ LEL+YRASRDG++ + H +C D SPSTI+L V D ++ S++GGF SV W ++ G DS F+F+ K+G+ +QP W L + + G FG G R+ S + + G F L + ++++EV+ + R+ + + P + Y + N+ FG SIAG L +ER AL A+ EL+ A A+ ALA+VYGP A+G DPIVEL+V G+R MTTL STLQACPESALAARFD++KWP KD + DC+P++F+KVLDVLR++KR W+ K A V+ V I + DRA FEEFV+MYFPGC+SF+MD V
Sbjct: 37 LNVGGLDVNIARSVLRKAGESSSSTWTLGDLFEGCVWDKRLPRCEDGRIVLDESPVCVEELL---CDASSKRPGNSN-----------FPDDEKPYIGGVASALGLD---LGMTVP-GGSTTLPHDEAERLTATILGWCPGRPEGLELLYRASRDGWSGDALHARCGDDSPSTISLFRVKTQDANTSDSIVGGFSSVPWTALPPENRGL--------------DS---FLFILKDGIEES-HNFQPAIWGLRIRNPKPSGAYDMEKFGLIFGRG--RIFDLSVVWTNQTLVAGNQVYAVPPGFQFIRLGGRAIADVEVFRV---RQTMGTLPTTPPTVTGLIDCAAYFEASAMSAEEHENDVYRFGTSIAGS-LKDERAALHTAQRELVQANTMAAASLKALAAVYGPHTAAGVKDPIVELSVRGSRTTERMTTLLSTLQACPESALAARFDEAKWPVTEKDKDAHGRRVMKDCSPSVFSKVLDVLRMKKREAWAGDDGKMGAAVL---VAIKDADRAPFEEFVNMYFPGCESFIMDSV 530
BLAST of mRNA_H-elongata_contig54420.12822.1 vs. uniprot
Match: A0A6H5L232_9PHAE (TLDc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L232_9PHAE) HSP 1 Score: 299 bits (765), Expect = 1.070e-90 Identity = 197/530 (37.17%), Postives = 277/530 (52.26%), Query Frame = 2
Query: 215 LSVGGLYLNVCRSVFESMGQKPVKDWELANLFDVVWDSRVPKDEDGRIFLDESPVILKHLVHTKLEASITTHNSTNVILRDVITPVPLVDHQRPYLHKVARDLRLDT--PFLGMRVKCDSSIVLSTNELEELSVHIRNWCPGDPQDLELIYRASRDGFNANGFHTKCTDYSPSTITLITVNHDDPDSRSSVIGGFFSVSWVPTANKSDGFYMDGCCYGSTYNSKDSPGAFIFMAKNGLARGGEKYQPLHWNLPGGSTGHPAIRCGTQLGPDFGGGGYRVTFTSTSQRSCNIFFGENTIITDTMTPFKNLQQKRVSEIEVYLLLYGRRDAASGVSDAPKICSTEGVPVYADTVYRGQVNNACLFGASIAGGVLMEERVALSNAEAELLLAKKKVQAAASALASVYGPDIASGKPDPIVELNVWGTRMTTLRSTLQACPESALAARFDDSKWPSDGKDFG-----VIDCNPAIFAKVLDVLRLRKRAKWSQQKRTAKVILSRVVITEGDRASFEEFVDMYFPGCKSFVMDWV 1783
L+VGG +L R V + ++P W L NLF+ VWD R+P+D DGRI LD+SP +K L+H+ +E+S S + L + YL VAR L L P GM V + +LS E+ EL+ ++ WCPG+P ++L+YRASRD ++ FH C + SP+TITL+ V + +S++GGF SV W P A D + S GAFIFM K+ G +QP+ W+ + G+ + G GP FG V FT + + ++ F NL + ++EIEV+ + IC+ G LMEER+AL AEAEL A K + ALA+VYGP++A G D +VEL+V GTRMTTLRSTL+AC ESALAA F++ KWP+ KD +I+C+PA+F KVLDVLR+RKRA W+ R + + V + DR +F+ FV+M+FPG ++F+ D V
Sbjct: 70 LNVGGSHLRFRRCVLDGK-KEPSATWALGNLFESVWDDRLPRDSDGRIVLDKSPACVKDLIHSLIESSGAAPGS-------LPRGETLAPDEMAYLPHVARALGLSAYIPLQGMEV-VGGTTILSHCEVGELTATLQGWCPGNPNTMQLLYRASRDDWSPYPFHASCGNNSPNTITLLRVG-----ASASIVGGFSSVPWSPHAYGGD-------------SVMSSLGAFIFMLKDSDMGGPNSFQPVKWSKRDNNGGYDVV-VGASRGPFFGRTDLVVNFTYVP---VTLQAQPYSYDVPSVPAFPNLNGQTITEIEVFQV---------------NICNA-------------------------IAGALMEERIALYQAEAELEHAHSKAAVSGRALAAVYGPEVARGAIDTVVELSVRGTRMTTLRSTLRACRESALAALFNEDKWPATDKDVDEQGRRLINCSPAVFQKVLDVLRMRKRAAWAASDRES----AHVRVDAADRPAFDSFVNMFFPGFENFITDMV 524
BLAST of mRNA_H-elongata_contig54420.12822.1 vs. uniprot
Match: D7FIX7_ECTSI (BTB_2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIX7_ECTSI) HSP 1 Score: 268 bits (684), Expect = 6.510e-79 Identity = 190/525 (36.19%), Postives = 259/525 (49.33%), Query Frame = 2
Query: 260 ESMGQKPVKDWELANLFDVVWDSRVPKDEDGRIFLDESPVILKHLVHTKLEASITTHNSTNVILRDVITPVPLVDHQRPYLHKVARDLRLDTPF--LGMRVKCDSSIVLSTNELEELSVHIRNWCPGDPQDLELIYRASRDGFNANGFHTKCTDYS-PSTITLITVNHDDPDSRSSVIGGFFSVSWVPTANKSDGFYMDGCCYGSTYNSKDSPGAFIFMAKNGLARGGEKYQPLHWNLPGGSTGHPAIRCGTQLGPDFGGG-GYRVTFTSTSQRSCNIFFGENTIITDTMTPFKNLQQKRVSEIEVYLLLYGRRDAASGVSDAPKICSTE---GVPVYADTVYRGQVNNACLFGASIAGGVLMEERVALSNAEAELLLAKKKVQAAASALASVYGPDIASGKPDPIVELNVWGTRMTTLRSTLQACPESALAARFDDSKWPSDGKDFG-----VIDCNPAIFAKVLDVLRLRKRAKWSQQ-----KRTAKVILSRVVITEGDRASFEEFVDMYFPGCKSFVMDWV 1783
E G++P W L +LF+ WD RVP+D DGRI LDESP+ +KHL+ EA + N+ N D Q H AR L L +GM +K + +E +L+ ++ WCPG+P A +D +C D S P+TIT + V + +IGGF S+ W SD Y SPGAF+FM K+G R YQ W + G + + R G GP FG G V + T + G T T +PF L R+ ++E + + S + G PV R FG +A LMEE L A EL LAK + A A+A+A+VYGP++A+G D +VELNV GTRMTTLRSTL+ CP+SALAA F++ +WP KD +IDC P++F+KVLDVLR+ KRA W++ + + + RV I GD A+FEEFVDMYFP C++F+M+ V
Sbjct: 39 EGKGEQPSSTWALGDLFEAEWDKRVPRDADGRIVLDESPICVKHLI----EALLLRPNAANGTATGEADMSR--DDQPDLFHHTARVLGLSGQLAPVGMTIK-GGTTTFDPHEASKLTAVVQRWCPGNPG------AACQD---------RCGDQSSPTTITFLRVKGRGAAATDCIIGGFSSIPWDDFMYDSDAGYYS-----------PSPGAFLFMLKDGEGRHSGVYQSTKWGVKDGRSAYAVYR-GQGYGPCFGEGRDLHVVWNGTESA---VRTGNQTYHAPTGSPFPELNGCRLVDVETFRVGPKPNTPTSSTKQEDHAVEDKTGPGAPVKTADDVRS-------FGDLVADS-LMEEEKLLQEAANELSLAKARTMACATAVAAVYGPEVATGTEDDVVELNVRGTRMTTLRSTLRICPDSALAAWFNEEQWPVAEKDLDSNGRRIIDCKPSVFSKVLDVLRIAKRAAWARSEEGPVRNEKRRVKPRVTIKAGDCAAFEEFVDMYFPCCETFMMEHV 518
BLAST of mRNA_H-elongata_contig54420.12822.1 vs. uniprot
Match: D7FR77_ECTSI (TLDc domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR77_ECTSI) HSP 1 Score: 243 bits (620), Expect = 2.100e-69 Identity = 189/549 (34.43%), Postives = 270/549 (49.18%), Query Frame = 2
Query: 215 LSVGGLYLNVCRSVFESMGQKPVKDWELANLFDVVWDSRVPKDEDGRIFLDESPVILKHLVHTKLEASITTHNSTNVILRDVITPVPLVDHQRPYLHKVARDLRLDTPFLGMRVKCDS--SIVLSTN-ELEELSVHIRNWCPGDPQDLELIYRASRDGFNANGFHTKCTDYSPSTITLITVNHDDPDSRS----SVIGGFFSVSWVPTANKSDGFYMDGCCYGSTYNSKDSPGAFIFMAKNGLARGGEKYQPL------HWNLPG------GSTGHPAIRCGTQLGPDFGGGGYRVTFTSTSQRSCNIFFGENTIITDTMTPFKNLQQKRVSEIEVYLLLYGRRDAASGVSDAPKICSTEGVPVYADTVYRGQVNNACLFGASIAGGVLMEERVALSNAEAELLLAKKKVQAAASALASVYGPDIASGKPDPIVELNVWG----TRMTTLRSTLQACPESALAARFDDSKWPSDGKDFG---VIDCNPAIFAKVLDVLRLRKRAKWSQQKRTAKVILSRVVITEGDRASFEEFVDMYFPGCKSFVMDWV 1783
L+VGG +++ R+ + + + W+LANLFD WD R+P+D +G + LDESPV KHLV D + V D Q YL V+ L + +P R + DS S +L EL+ L+ + +WCPG+P+ L+L+YRASRDG++ FH +C D SP T+TL +N D +R SV+G F SV W P SDG+ K SPG F+F+ L G ++P H+ G G P+ ++ F G + TS + ++ F V+EIEVY + + + D ++R FG SIA EE AL A+++L+ A +K A+ASALA+VYGP +AS DP+V+ +V G TR+TTLRSTLQ CP L AR D SKW + G + DC+PA+F+KVLDVLR++KRA W + + + VV+ DR +FE+ V MYFPGC+ ++D V
Sbjct: 36 LNVGGSNVDISRADLQRLPALS-EAWKLANLFDSDWDERLPRDANGLMVLDESPVCFKHLV-------------------DALGGVLPTDEQA-YLPYVSNALGVPSPARVPRRRVDSEGSAMLGIGGELDRLARTVLDWCPGNPERLDLLYRASRDGWDTRHFHARCGDDSPMTVTLYRLN--DASNRKGLNCSVLGCFSSVPWTPP---SDGYTK----------LKSSPGGFVFI----LTDGSRSFRPTKLKVHPHYAKRGCGLVVLGEGSMPSFHVDLEV---FHGKERHRSCTSGTNAKYRLWTDSGAFYVPEGCSFLKYDGIDVAEIEVYRVWSAEEERS-------------------DDIHR--------FGGSIAAS-FEEEHKALHKAQSKLVEATEKGAASASALAAVYGPGVASNSRDPVVDFSVRGSRTTTRITTLRSTLQLCPY--LVARLDQSKWTENKDKHGRWLIKDCSPAVFSKVLDVLRMKKRAGWIGGE-----VKAHVVVKATDREAFEQAVGMYFPGCERVILDHV 506
BLAST of mRNA_H-elongata_contig54420.12822.1 vs. uniprot
Match: D7G141_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G141_ECTSI) HSP 1 Score: 244 bits (623), Expect = 2.600e-68 Identity = 203/581 (34.94%), Postives = 280/581 (48.19%), Query Frame = 2
Query: 215 LSVGGLYLNVCRSVF-ESMGQKPVKDWELANLFDVVWDSRVPKDEDGRIFLDESPVILKHLVHTKLEASITTHNSTNVIL---RDVITPVPLVD-HQRPYLHKVARDLRLDT-----PFLGMRVKCDSSIVLSTNELEELSVHIRNWCPGDPQDLELIYRASRDGFNANGFHTKCTDYSPSTITLITVNHDD--PDSRSSVIGGFFSVSWVPTANKSDGFYMDGCCYGSTYNSK------DSPGAFIFMAKNGLARGGEKYQPLHWNLPGGSTGHPAIRCGTQLGPDFGGGGYRVTFTSTSQRS----CNIFFGENTIITDTMTPFKNLQQKRVSEIEVYLLLYGRRDAASGVSDAPKICSTEGVPVYAD----------TVYRGQVNNACLFGASIAGGVLMEERVALSNAEAELLLAKKKVQAAASALASVYGPDIASGKPDP--IVELNVWGTRMTTLRSTLQACPESALAARFDDSKWP----SDGK--DFGV-----------IDCNPAIFAKVLDVLRLRKRAKWSQQKRTAKVILS-------RVVITEGDRASFEEFVDMYFPGCKSFVMDWV 1783
L++GG+ NV RS+ E+ G K L LF+ +WD RVP+D DGRI LDESP +KH++HT L TT L R P V H+ PYL ++ L L P V + + +L + S +R+WCPGDP L L+YRASRDGF+ F +C TITLI V DD PDS V+GGF + VP G G+ +S DSPG AK + GE +HW A C GP FG VTF+ + +S C + G D +PF L K V+EIE++ + R V AP + ++ D + + A FG+S+A +LMEE++AL+ A+ EL AKK+ A A ALA VYGP +AS + + +VEL+V G +TTLRSTL+ACP+SA + + P DG+ D G+ +DC+P+ F+K+LDV+R+RKRA W + +I R+ + E DRA F+ V FP C+ FVMD +
Sbjct: 69 LNIGGVPANVHRSLIAEAEG---FKGSVLGALFEQMWDERVPRDMDGRIVLDESPACVKHIIHTLLRGGCTTRTKETASLCHFRSAAGPSAAVAAHEEPYLLYISHVLGLSNVIPACPNTKGMVVAGGTTTANPLQLPQWSSLLRSWCPGDPAGLHLLYRASRDGFSTGPFQ-QCVRGVCETITLIRVKSDDGRPDS---VVGGFSDIEIVPQEV--------GMETGNQRSSSAFLFLLDSPGGGFPTAKKWSIKEGEDSCAIHWP-------ETADVC---AGPAFGLEDMCVTFSESEGQSGSSGCTLSTGGEFYDVDEDSPFVGLDGKEVAEIEIFRVDKTARVEHQDV--APVATTPPQSNIFPDKRKHFLHPDRSADEIEAAYALQFGSSLAE-LLMEEQMALAYAQTELEEAKKRAAATARALAIVYGPGVASARVEENAVVELSVRGMSVTTLRSTLEACPDSAFSTWLGAADRPVGCGDDGEANDEGLGGRTSEDCRRKVDCDPSCFSKILDVMRMRKRAAWVTDDQQGALIREAGGGHTVRIPVPESDRACFKNLVHTLFPECEDFVMDMI 621
BLAST of mRNA_H-elongata_contig54420.12822.1 vs. uniprot
Match: A0A6H5JCR8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCR8_9PHAE) HSP 1 Score: 209 bits (531), Expect = 1.110e-56 Identity = 150/385 (38.96%), Postives = 199/385 (51.69%), Query Frame = 2
Query: 662 RASRDGFNANGFHTKCTDYSPSTITLITVNHDDPDSRSSVIGGFFSVSWVPTANKSDGFYMDGCCYGSTYNSKDSPGAFIFMAKNGLARGGEKYQPLHWNLPGGSTGHPAIRCGTQLGPDFGGGGYRVTFTSTSQRSCNIFFGENTIITDTMTPFKNLQQKRVSEIEVYLLLYGRRDAASGVSDAPKI-CSTEGVPVYADTVYRGQVNNACLFGASIAGGVLMEERVALSNAEAELLLAKKKVQAAASALASVYGPDIASGKPDPIVELNVWGTR----MTTLRSTLQACPESALAARFDDSKWPSDGKDFG------VIDCNPAIFAKVLDVLRLRKRAKWSQQKRTAKVILSRVVITEGDRASFEEFVDMYFPGCKSFVMDWV 1783
RASRD ++ + FH +C D SPSTI+L V ++ SV+G F V W + S SPG+F+FM K+G G + QP W G TG + G GP V + R + G I T+ PF + V +IEV+ +L + A CS + + VYR FG SIAG L +ER AL A+ EL+ A A+ ALA+VYGP+IA+G D +VEL+V G R MTTL STLQACPESALAARFD++KWP K+ + DC+P +FAKVLDVLR++KR W+ + + + V I DRA FE+FV+MYFP C+SF+MD V
Sbjct: 175 RASRDSWSDHAFHARCGDDSPSTISLFCVEAQGANNSDSVVGRFSVVPWTASPEFSPVL--------------PSPGSFLFMLKDGN-EGSDAVQPSKWGPKVGYTGQ--VVDGRTEGP--------VDWVMCLHRMFTVHCGIYDIPTE--HPFLYHMGREVVDIEVFRVLPTSLTVTGLIDCAAYFKCSDMSAEEHENDVYR--------FGMSIAGS-LRDERAALHTAQRELVKANTIAAASVEALAAVYGPNIAAGVEDRVVELSVRGPRKTERMTTLLSTLQACPESALAARFDEAKWPVTDKEKDAHGRRVIKDCSPLVFAKVLDVLRMKKREAWADDDKKVRAAVL-VAIKAADRAPFEKFVNMYFPACESFIMDSV 522
BLAST of mRNA_H-elongata_contig54420.12822.1 vs. uniprot
Match: A0A6H5JD55_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD55_9PHAE) HSP 1 Score: 196 bits (499), Expect = 1.080e-52 Identity = 172/535 (32.15%), Postives = 241/535 (45.05%), Query Frame = 2
Query: 215 LSVGGLYLNVCRSVFESMGQKPVKDWELANLFDVVWDSRVPKDEDGRIFLDESPVILKHLVHTKLEASITTHNSTNVILRDVITPVPLVDHQRPYLHKVARDLRL---DTPF-LGMRVKCDSSIVLSTNELEELSVHIRNWCPGDPQDLELIYRASRDGFNANGFHTKCTDYSPSTITLITVNHDDPDSRSSVIGGFFSVSWVPTANKSDGFYMDGCCYGSTYNSKDSPGAFIFMAKNGLARGGEKYQPLHWNLPGGSTGHPAIRCGTQLGPDFGGGGYRVTFTSTSQRSCNIFFGENTIITDTMTPFKNLQQKRVSEIEVYLLLYGR-RDAASGVSDAPKICSTEGVPVYADTVYRGQVNNACLFGASIAGGVLMEERVALSNAEAELLLAKKKVQAAASALASVYGPDIASGKPDP-IVELNVWGTRMTTLRSTLQACPESALAARFDDSKWPSDGKDFG-----VIDCNPAIFAKVLDVLRLRKRAKWSQQKRTAKVILS-RVVITEGDRASFEEFVDMYFPGCKSFVMDWV 1783
L+VGG L RSV E G++ W L L + WD RVP+D DGRI LDESP ++ + H+ + P D + L+ AR L L PF + MR +L +E + L+ ++ WCPG P LEL+YRASRDG++A F KC D SPSTI+L P S F++S + + + G NG+ + W + ST T Q + L + V +IE + L Y R DA S S PK + V V + + FG IA LMEE + L A EL +A+ + A A+AL VYGPD+A G+ + +VEL+V GTR+T + STL+ CP S A +F + +WP+ KD VIDC P++F+KV+D+LR A W++ + + RV I DRA FEEFVD+YF GC+S +M++V
Sbjct: 23 LNVGGSRLTFHRSVLEGKGEQQGLTWALGTLCEAEWDKRVPRDSDGRIVLDESPTC------PRVWGAREEHD---------LAP----DDKPELLYYTARVLGLRGQSAPFDMPMR---GGPNILEPHETKRLTAIVQGWCPGHPGGLELLYRASRDGWSARSFDDKCRDGSPSTISL-------PFSGFESRADLFTISTIVLFSAAPG--------------------------NGMCD-----LRVVWKVGAASTVQTK------------------NLTQDVQAESRLLA---------------LNGRGVVDIETFRLCYCRPTDALS--SAKPKHHFIGDIAVPTAPVRSRLLRMSFPFGRLIADA-LMEE-IVLQEANNELAVAEARTTACATALVVVYGPDVAKGREEEDVVELSVCGTRVTRMCSTLRVCPGSTFATQFLEDRWPATKKDLDDNGRRVIDCEPSVFSKVMDILR----ASWARGDDDQEANKTPRVTIKPCDRAEFEEFVDIYFKGCESLIMEYV 456
BLAST of mRNA_H-elongata_contig54420.12822.1 vs. uniprot
Match: A0A6H5KTF6_9PHAE (TLDc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTF6_9PHAE) HSP 1 Score: 187 bits (476), Expect = 1.200e-49 Identity = 153/443 (34.54%), Postives = 206/443 (46.50%), Query Frame = 2
Query: 290 WELANLFDVVWDSRVPKDEDGRIFLDESPVILKHLVHTKLEASITTHNSTNVILRDVITPVPLVDHQRPYLHKVARDLRLDTPFLGMRVKCDSSIVLST-----------NELEELSVHIRNWCPGDPQDLELIYRASRDGFNANGFHTKCTDYSPSTITLITVNHDDPDS-RSSVIGGFFSVSWVPTANKSDGFYMDGCCYGSTYNSKDSPGAFIFMAKNGLARGGEKYQPLHWNLPGGSTGHPAIRCGTQLGPDFGGGGYRVTFTSTSQRSCNIFFGENTIITDTMTPFKNLQQKRVSEIEVYLLLYGRRDAASGVSDAPK------------ICSTEGVPVYADTVYRGQVNNACLFGASIAGGVLMEERVALSNAEAELLLAKKKVQAAASALASVYGPDIASGKPDPIVELNVWGTRMTTLRSTLQACPESALAARFD 1546
W L +LF+ +WD R+P+D +G I LDESP+ +KHL+ L+ S LD+PF C L T +E+ L+ ++ WCPG+P L LIYRASRDG+ FH C SP TITL V + +++GGF SW + C + S+ SP AFI M K G A G +QP W +P G P + GP FG ++ + R ++ G + D + F L + V EIEV+ + R+A +G P I T G P +D ++ + GA IA LMEER AL A AEL K + +AL +VYGPD+A+GK D +VEL+V TR+TTLRSTLQACP+SALAARFD
Sbjct: 65 WNLCDLFESMWDKRIPRDANGLIVLDESPICVKHLLRALLKKSGAA--------------------------------ALDSPF-----GCSGQGWLRTRWPTSPRSWRLSEVCPLTDILQGWCPGNPSRLHLIYRASRDGWGGEAFHECCGKDSPVTITLFRVLSSAGTAVTDTIVGGFSRSSW-----------SNSCPF-----SRFSPDAFICMVKYGSADGSSSFQPSKW-IP--RRGLPNYLGTSSHGPCFGSD-LCMSLHDDNARFLHVAIGAFNVSED--SAFFTLGGQTVKEIEVFRVC---REATAGSPPPPPRAKPATTSENGLIDLTSGGP--SDAATESYDDDVRMSGALIAES-LMEERAALREAFAELAQPNTKAGESVNALTAVYGPDVAAGKEDTVVELSVRETRLTTLRSTLQACPDSALAARFD 442 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig54420.12822.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig54420.12822.1 >prot_H-elongata_contig54420.12822.1 ID=prot_H-elongata_contig54420.12822.1|Name=mRNA_H-elongata_contig54420.12822.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=95bp MQRKSINEKATFTTATAASSKELQATLRNRRSYYLDHAWDTLDDGWKKLEback to top mRNA from alignment at H-elongata_contig54420:1765..3547- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig54420.12822.1 ID=mRNA_H-elongata_contig54420.12822.1|Name=mRNA_H-elongata_contig54420.12822.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1783bp|location=Sequence derived from alignment at H-elongata_contig54420:1765..3547- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig54420:1765..3547- >mRNA_H-elongata_contig54420.12822.1 ID=mRNA_H-elongata_contig54420.12822.1|Name=mRNA_H-elongata_contig54420.12822.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=570bp|location=Sequence derived from alignment at H-elongata_contig54420:1765..3547- (Himanthalia elongata Himel1 dioecious)back to top |