mRNA_H-elongata_contig54035.12771.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig54035.12771.1 vs. uniprot
Match: D7FS56_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FS56_ECTSI) HSP 1 Score: 160 bits (405), Expect = 2.960e-43 Identity = 86/148 (58.11%), Postives = 97/148 (65.54%), Query Frame = 1
Query: 31 SQRALSVLDGMTICEVAWHEGGSLPETLFACLYFHPVVLSAI------------------------------------------ILAQSLATLRCCSIARDVVILADIYEEEDFYSSTFGFRLAPPVEDESLADLLGLAERAVRERVR 348
SQR LSVLDGM++CEVAWHEGGSLPETL+ACLY HP V SA+ +LAQSLATLRCCS+ARDV+ILADI+EEEDFY STFGFRLAPPVEDESL DLL LAE A+R R++
Sbjct: 144 SQRTLSVLDGMSVCEVAWHEGGSLPETLYACLYLHPDVFSAVLRGLGWPLEQAPGSSSARTRLDLRIKEGNFPWKPVDRALTLAVLAQSLATLRCCSLARDVMILADIFEEEDFYPSTFGFRLAPPVEDESLTDLLALAEAAMRARIK 291
BLAST of mRNA_H-elongata_contig54035.12771.1 vs. uniprot
Match: A0A836CGZ5_9STRA (Mak10 subunit, NatC N-terminal acetyltransferase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGZ5_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 1.080e-21 Identity = 56/142 (39.44%), Postives = 71/142 (50.00%), Query Frame = 1
Query: 49 VLDGMTICEVAWHEGGSLPETLFACLYFHPVVLSAI---------------------------------------------------ILAQSLATLRCCSIARDVVILADIYEEEDFYSSTFGFRLAPP--VEDESLADLLG 315
VLDG+ CE+AWH+GGSLPETL+ CLY HP L A+ + A A LRCC IARD+V+LADI+EEEDFY+ +FGF+L PP + D++L LLG
Sbjct: 78 VLDGLLTCELAWHDGGSLPETLYTCLYVHPSALEALMRVLQLDKAAPEATRENGSSSANSSTGISDVQQSATILDERHVVGKELSLALFAYVAACLRCCGIARDIVLLADIHEEEDFYTKSFGFQLVPPTGISDKALVVLLG 219
BLAST of mRNA_H-elongata_contig54035.12771.1 vs. uniprot
Match: UPI00109BCEE9 (N-alpha-acetyltransferase 35, NatC auxiliary subunit n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI00109BCEE9) HSP 1 Score: 75.5 bits (184), Expect = 1.620e-14 Identity = 37/105 (35.24%), Postives = 59/105 (56.19%), Query Frame = 1
Query: 52 LDGMTICEVAWHEGGSLPETLFACLYFHP--VVLSAIILAQSLATLRCCSIARDVVILADIYEEEDFYSSTFGFRLAPPVEDESLADLLGLAERAVRERVRGGAV 360
+D + C V W +G SL +T+F CLY H ++ + A +A L+CC R V A ++EEEDF S T+GF++ PV + A +L AE + ++++ V
Sbjct: 1 MDELLACLVTWLDGHSLVQTVFICLYMHDPFLIQDPCLKAFCVAVLKCCEFIRIAVNTAQVFEEEDFQSMTYGFKMGSPVSEPRAAGMLKEAEEEIAKKIKSARV 105
BLAST of mRNA_H-elongata_contig54035.12771.1 vs. uniprot
Match: A0A8C4NDR6_EPTBU (N-alpha-acetyltransferase 35, NatC auxiliary subunit n=1 Tax=Eptatretus burgeri TaxID=7764 RepID=A0A8C4NDR6_EPTBU) HSP 1 Score: 75.5 bits (184), Expect = 7.160e-14 Identity = 40/104 (38.46%), Postives = 60/104 (57.69%), Query Frame = 1
Query: 43 LSVLDGMTICEVAWHEGGSLPETLFACLYFH--PVVLSAIILAQSLATLRCCSIARDVVILADIYEEEDFYSSTFGFRLAPPVEDESLADLLGLAERAVRERVR 348
+ ++D C V W EG SL +T+F CLY H ++ A + A +L L+ C I RD V A ++EEEDF+S T+GF++A V D + +L E + RV+
Sbjct: 99 VGIIDNCFCCLVTWLEGHSLAQTVFTCLYMHNADLIEDAAMKAFTLGILKICDIVRDKVNKASVFEEEDFHSMTYGFKMANNVTDLRVTGMLKDVEEDFQRRVK 202
BLAST of mRNA_H-elongata_contig54035.12771.1 vs. uniprot
Match: A0A6P8II77_ACTTE (Protein MAK10 homolog n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8II77_ACTTE) HSP 1 Score: 76.3 bits (186), Expect = 9.660e-14 Identity = 39/112 (34.82%), Postives = 62/112 (55.36%), Query Frame = 1
Query: 31 SQRALSVLDGMTICEVAWHEGGSLPETLFACLYFH-PVVLSAIIL-AQSLATLRCCSIARDVVILADIYEEEDFYSSTFGFRLAPPVEDESLADLLGLAERAVRERVRGGAV 360
S L ++D + C V W +G SL +T+F CLY H P ++ + L A +A L+CC R V A ++EEEDF S T+GF++ V + A +L AE + +++ +
Sbjct: 133 SDELLGIMDQLMACLVTWLDGHSLVQTVFICLYMHDPFLIEDLCLKAYCIAILKCCEFIRIAVNTAQVFEEEDFQSMTYGFKMGSQVSETRTAGMLKEAEEEISRKLKNARI 244
BLAST of mRNA_H-elongata_contig54035.12771.1 vs. uniprot
Match: A0A8C4N7Z4_EPTBU (N-alpha-acetyltransferase 35, NatC auxiliary subunit n=1 Tax=Eptatretus burgeri TaxID=7764 RepID=A0A8C4N7Z4_EPTBU) HSP 1 Score: 75.5 bits (184), Expect = 1.020e-13 Identity = 40/104 (38.46%), Postives = 60/104 (57.69%), Query Frame = 1
Query: 43 LSVLDGMTICEVAWHEGGSLPETLFACLYFH--PVVLSAIILAQSLATLRCCSIARDVVILADIYEEEDFYSSTFGFRLAPPVEDESLADLLGLAERAVRERVR 348
+ ++D C V W EG SL +T+F CLY H ++ A + A +L L+ C I RD V A ++EEEDF+S T+GF++A V D + +L E + RV+
Sbjct: 99 VGIIDNCFCCLVTWLEGHSLAQTVFTCLYMHNADLIEDAAMKAFTLGILKICDIVRDKVNKASVFEEEDFHSMTYGFKMANNVTDLRVTGMLKDVEEDFQRRVK 202
BLAST of mRNA_H-elongata_contig54035.12771.1 vs. uniprot
Match: F6UFC8_MOUSE (N-alpha-acetyltransferase 35, NatC auxiliary subunit (Fragment) n=1 Tax=Mus musculus TaxID=10090 RepID=F6UFC8_MOUSE) HSP 1 Score: 70.5 bits (171), Expect = 6.530e-13 Identity = 38/104 (36.54%), Postives = 59/104 (56.73%), Query Frame = 1
Query: 43 LSVLDGMTICEVAWHEGGSLPETLFACLYFH--PVVLSAIILAQSLATLRCCSIARDVVILADIYEEEDFYSSTFGFRLAPPVEDESLADLLGLAERAVRERVR 348
+ ++D C + W EG SL +T+F CLY H + + A +L L+ C IAR+ V A ++EEEDF S T+GF++A V D + +L E ++ RV+
Sbjct: 28 IGIMDTCFCCLITWLEGHSLAQTVFTCLYIHNPDFIEDPAMKAFALGILKICDIAREKVNKAAVFEEEDFQSMTYGFKMANSVTDLRVTGMLKDVEDDLQRRVK 131
BLAST of mRNA_H-elongata_contig54035.12771.1 vs. uniprot
Match: UPI00138FFF81 (N-alpha-acetyltransferase 35, NatC auxiliary subunit n=3 Tax=Nematostella vectensis TaxID=45351 RepID=UPI00138FFF81) HSP 1 Score: 73.2 bits (178), Expect = 1.160e-12 Identity = 35/104 (33.65%), Postives = 58/104 (55.77%), Query Frame = 1
Query: 43 LSVLDGMTICEVAWHEGGSLPETLFACLYFHP--VVLSAIILAQSLATLRCCSIARDVVILADIYEEEDFYSSTFGFRLAPPVEDESLADLLGLAERAVRERVR 348
L V+D + C V W +G SL +T+F CLY H ++ + A +A L+CC R + A ++EEEDF S T+GF++ V + A ++ AE + +++
Sbjct: 133 LGVMDELMACVVTWLDGHSLVQTVFICLYMHNPFIIEDPCLKAYCVAVLKCCEFIRLAINKAQVFEEEDFQSMTYGFKMGNQVSETRAAGMIKEAEEEIARKIK 236
BLAST of mRNA_H-elongata_contig54035.12771.1 vs. uniprot
Match: S9Y4R5_CAMFR (N-alpha-acetyltransferase 35, NatC auxiliary subunit n=1 Tax=Camelus ferus TaxID=419612 RepID=S9Y4R5_CAMFR) HSP 1 Score: 70.9 bits (172), Expect = 1.380e-12 Identity = 39/104 (37.50%), Postives = 59/104 (56.73%), Query Frame = 1
Query: 43 LSVLDGMTICEVAWHEGGSLPETLFACLYFH--PVVLSAIILAQSLATLRCCSIARDVVILADIYEEEDFYSSTFGFRLAPPVEDESLADLLGLAERAVRERVR 348
+ ++D C + W EG SL +T+F CLY H V + A +L L+ C IAR+ V A ++EEEDF S T+GF++A V D + +L E ++ RV+
Sbjct: 82 IGIMDTCFCCLITWLEGHSLAQTVFTCLYIHNPDFVEDPAMKAFALGILKICDIAREKVNKAAVFEEEDFQSMTYGFKMANSVTDLRVTGMLKDVEDDMQRRVK 185
BLAST of mRNA_H-elongata_contig54035.12771.1 vs. uniprot
Match: UPI0018B0A780 (N-alpha-acetyltransferase 35, NatC auxiliary subunit-like n=1 Tax=Chlorocebus sabaeus TaxID=60711 RepID=UPI0018B0A780) HSP 1 Score: 70.5 bits (171), Expect = 1.660e-12 Identity = 38/104 (36.54%), Postives = 59/104 (56.73%), Query Frame = 1
Query: 43 LSVLDGMTICEVAWHEGGSLPETLFACLYFH--PVVLSAIILAQSLATLRCCSIARDVVILADIYEEEDFYSSTFGFRLAPPVEDESLADLLGLAERAVRERVR 348
+ ++D C + W EG SL +T+F CLY H + + A +L L+ C IAR+ V A ++EEEDF S T+GF++A V D + +L E ++ RV+
Sbjct: 91 IGIMDTCFCCLITWLEGHSLAQTVFTCLYIHNPDFIEDPAMKAFALGILKICDIAREKVNKAAVFEEEDFQSMTYGFKMANSVTDLRVTGMLKDVEDDMQRRVK 194 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig54035.12771.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig54035.12771.1 >prot_H-elongata_contig54035.12771.1 ID=prot_H-elongata_contig54035.12771.1|Name=mRNA_H-elongata_contig54035.12771.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=120bp MEVTQPQISYSQRALSVLDGMTICEVAWHEGGSLPETLFACLYFHPVVLSback to top mRNA from alignment at H-elongata_contig54035:900..1766- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig54035.12771.1 ID=mRNA_H-elongata_contig54035.12771.1|Name=mRNA_H-elongata_contig54035.12771.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=867bp|location=Sequence derived from alignment at H-elongata_contig54035:900..1766- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig54035:900..1766- >mRNA_H-elongata_contig54035.12771.1 ID=mRNA_H-elongata_contig54035.12771.1|Name=mRNA_H-elongata_contig54035.12771.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=720bp|location=Sequence derived from alignment at H-elongata_contig54035:900..1766- (Himanthalia elongata Himel1 dioecious)back to top |