mRNA_H-elongata_contig53937.12758.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig53937.12758.1
Unique NamemRNA_H-elongata_contig53937.12758.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig53937.12758.1 vs. uniprot
Match: A0A6H5L673_9PHAE (Tyrosine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L673_9PHAE)

HSP 1 Score: 572 bits (1474), Expect = 3.280e-202
Identity = 284/331 (85.80%), Postives = 301/331 (90.94%), Query Frame = 1
Query:    1 AASRTRVGQLLSVDTPMEGHPLVYGQQAANEAPSVKSPFLQTLVERGFYHQCSNVNGLDDKLSTGEVIKGYLGFDATADSLHVGGLLQIMILRHLQKAGHQPIVLVGGGTTKIGDPSGKDETRKFLDEAAIQGNIKGLSSVFSKFLTFGDGPTDAKLVNNDEWLQNLSYLDFLREYGPHFTINRMMTFDSVRLRLEREQPLTFLEFNYMLLQAYDFTELYRRYGCVLQMGGSDQWGNMVNGVDLGRRVEKAELFALTAPLITTSEGKKMGKSASGAVWLNADKLPAYDYWQFWRNSDDADVGRFLKLFTELSMGEIHDLEQLTGAAINEAK 993
            A SRTRVG+LL+V++     P     +A NE  SVKSPFLQTLVERGFYHQC+NV GLD+KL  GEV+K YLGFDATADSLHVG LLQIMILRHLQKAGHQPIVLVGGGTTKIGDPSGKDE R+ LD+AAIQ NI GL+SVFSKFLTFGDGPTDAKLVNN+EWL  LSYLDFLREYGPHFTINRMMT+DSVRLRLEREQPLTFLEFNYMLLQAYDFTELYRRYGCVLQMGGSDQWGNMVNGVDLGRRVEKAELFALTAPLITTSEGKKMGKSA+GAVWLNADKLP YDYWQFWRN+DDADV RFLKLFTELSM E+H LEQLTGA IN+AK
Sbjct:   41 ALSRTRVGRLLAVESETVAVPASVTAEA-NEPVSVKSPFLQTLVERGFYHQCTNVEGLDEKLRAGEVVKAYLGFDATADSLHVGSLLQIMILRHLQKAGHQPIVLVGGGTTKIGDPSGKDEARQLLDDAAIQRNIDGLASVFSKFLTFGDGPTDAKLVNNNEWLNQLSYLDFLREYGPHFTINRMMTYDSVRLRLEREQPLTFLEFNYMLLQAYDFTELYRRYGCVLQMGGSDQWGNMVNGVDLGRRVEKAELFALTAPLITTSEGKKMGKSAAGAVWLNADKLPEYDYWQFWRNTDDADVIRFLKLFTELSMDEVHKLEQLTGAGINKAK 370          
BLAST of mRNA_H-elongata_contig53937.12758.1 vs. uniprot
Match: A0A835Z418_9STRA (Tyrosine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z418_9STRA)

HSP 1 Score: 466 bits (1198), Expect = 4.560e-160
Identity = 223/303 (73.60%), Postives = 263/303 (86.80%), Query Frame = 1
Query:   91 EAPSVKSPFLQTLVERGFYHQCSNVNGLDDKL--STGEVIKGYLGFDATADSLHVGGLLQIMILRHLQKAGHQPIVLVGGGTTKIGDPSGKDETRKFLDEAAIQGNIKGLSSVFSKFLTFGDGPTDAKLVNNDEWLQNLSYLDFLREYGPHFTINRMMTFDSVRLRLEREQPLTFLEFNYMLLQAYDFTELYRRYGCVLQMGGSDQWGNMVNGVDLGRRVEKAELFALTAPLITTSEGKKMGKSASGAVWLNADKLPAYDYWQFWRNSDDADVGRFLKLFTELSMGEIHDLEQLTGAAINEAK 993
            +A SVKS FL+T++ RGF++QC+++ GLD KL  + G     YLGFDATADSLHVG L QIMILRHLQK GH+P+VLVGGGTTK+GDPSG+DE+R+ LD+AAIQ N  G++SVF+KFLTFG+G +DA LV+NDEWL +L Y+ FLREYGP+FTINRM++FDSVRLRLEREQPLTFLEFNYMLLQAYDF EL++RYGC LQMGGSDQWGNMVNGV+LGRR   AEL+ALTAPLITTS+G+KMGKSA+GAVWLNAD+LP YDYWQFWRN+DDADV RFLKLFTEL +  I +LE+L G  IN AK
Sbjct:   83 DASSVKSAFLKTMISRGFFNQCTDLEGLDKKLLENGGVGFAAYLGFDATADSLHVGSLTQIMILRHLQKCGHKPLVLVGGGTTKVGDPSGRDESRQLLDDAAIQRNKDGITSVFNKFLTFGEGASDALLVDNDEWLSSLGYIQFLREYGPYFTINRMLSFDSVRLRLEREQPLTFLEFNYMLLQAYDFVELHKRYGCSLQMGGSDQWGNMVNGVELGRRTAGAELYALTAPLITTSDGRKMGKSAAGAVWLNADRLPPYDYWQFWRNTDDADVARFLKLFTELPLERIAELEKLEGKDINAAK 385          
BLAST of mRNA_H-elongata_contig53937.12758.1 vs. uniprot
Match: A0A7S3XVK9_HETAK (Tyrosine--tRNA ligase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XVK9_HETAK)

HSP 1 Score: 457 bits (1175), Expect = 1.450e-156
Identity = 215/297 (72.39%), Postives = 254/297 (85.52%), Query Frame = 1
Query:  103 VKSPFLQTLVERGFYHQCSNVNGLDDKLSTGEVIKGYLGFDATADSLHVGGLLQIMILRHLQKAGHQPIVLVGGGTTKIGDPSGKDETRKFLDEAAIQGNIKGLSSVFSKFLTFGDGPTDAKLVNNDEWLQNLSYLDFLREYGPHFTINRMMTFDSVRLRLEREQPLTFLEFNYMLLQAYDFTELYRRYGCVLQMGGSDQWGNMVNGVDLGRRVEKAELFALTAPLITTSEGKKMGKSASGAVWLNADKLPAYDYWQFWRNSDDADVGRFLKLFTELSMGEIHDLEQLTGAAINEAK 993
            +KS FL+T+ +RGF+HQC+++ GLD K+S    +K YLGFDATADSLHVG LLQI+ILR+LQ+AGH+PIVLVGGGTTK+GDPSGKDE RK L EA IQ NI G+S VF KFL FGDGPTDA LVNNDEWL  L+YL FLR+YGPHFTINRM+ F+SVRLRLEREQPL+FLEFNYM+LQ YDF EL RRY   LQ+GGSDQWGN++NG+DL R++++ ++F LTAPLITTS+GKKMGKSA+GAVWLNADKLPAYDYWQFWRN+ D DV RF+KLFTEL + +I     LTGAAIN+AK
Sbjct:   77 LKSDFLKTMRDRGFFHQCTDLEGLDKKMSEEGPVKAYLGFDATADSLHVGSLLQILILRNLQRAGHKPIVLVGGGTTKVGDPSGKDEARKLLTEADIQRNIDGISGVFRKFLAFGDGPTDALLVNNDEWLSELNYLQFLRDYGPHFTINRMLNFESVRLRLEREQPLSFLEFNYMILQGYDFLELSRRYDVALQLGGSDQWGNIINGIDLARKLDQKQVFGLTAPLITTSDGKKMGKSAAGAVWLNADKLPAYDYWQFWRNTADEDVVRFMKLFTELPLEQIEGYAALTGAAINDAK 373          
BLAST of mRNA_H-elongata_contig53937.12758.1 vs. uniprot
Match: L1JX61_GUITC (Tyrosine--tRNA ligase n=3 Tax=Guillardia theta TaxID=55529 RepID=L1JX61_GUITC)

HSP 1 Score: 451 bits (1161), Expect = 1.330e-154
Identity = 212/296 (71.62%), Postives = 249/296 (84.12%), Query Frame = 1
Query:  106 KSPFLQTLVERGFYHQCSNVNGLDDKLSTGEVIKGYLGFDATADSLHVGGLLQIMILRHLQKAGHQPIVLVGGGTTKIGDPSGKDETRKFLDEAAIQGNIKGLSSVFSKFLTFGDGPTDAKLVNNDEWLQNLSYLDFLREYGPHFTINRMMTFDSVRLRLEREQPLTFLEFNYMLLQAYDFTELYRRYGCVLQMGGSDQWGNMVNGVDLGRRVEKAELFALTAPLITTSEGKKMGKSASGAVWLNADKLPAYDYWQFWRNSDDADVGRFLKLFTELSMGEIHDLEQLTGAAINEAK 993
            KS F++ ++ERGF H C+N+  LD+K+ T E +K YLGFDATA SLHVG LLQIMILRHLQ+ GH+PIVL+GGGTTK+GDP+GKD++RK L +  IQ N+ G+ +VF KFL FGDGPTDA LVNNDEWL ++ YLDFLREYGP FTINRM+ F+SV+LRLERE PLTFLEFNYM+LQAYDF EL RRYGC LQ+GGSDQWGNMVNGV+L RR    ++FA+TAPLITTS+GKKMGKS  GAVWLNAD LP YDYWQFWRN+ DADV RFLKLFTEL M +I +L +L GAAIN+AK
Sbjct:   83 KSKFIKVMMERGFLHSCTNIEALDEKM-TSETVKAYLGFDATAKSLHVGSLLQIMILRHLQQCGHKPIVLLGGGTTKVGDPTGKDQSRKMLSDQDIQDNVNGIKTVFEKFLKFGDGPTDALLVNNDEWLSSIRYLDFLREYGPLFTINRMLNFESVKLRLERESPLTFLEFNYMILQAYDFLELNRRYGCSLQLGGSDQWGNMVNGVELTRRANSKQVFAMTAPLITTSDGKKMGKSEGGAVWLNADMLPPYDYWQFWRNTQDADVVRFLKLFTELPMEKIEELSKLEGAAINDAK 377          
BLAST of mRNA_H-elongata_contig53937.12758.1 vs. uniprot
Match: A0A7S2CQP3_9STRA (Tyrosine--tRNA ligase n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CQP3_9STRA)

HSP 1 Score: 450 bits (1157), Expect = 5.380e-154
Identity = 216/308 (70.13%), Postives = 254/308 (82.47%), Query Frame = 1
Query:   79 QAANEAPSVKSP---FLQTLVERGFYHQCSNVNGLDDKLSTGEVIKGYLGFDATADSLHVGGLLQIMILRHLQKAGHQPIVLVGGGTTKIGDPSGKDETRKFLDEAAIQGNIKGLSSVFSKFLTFGDGPTDAKLVNNDEWLQNLSYLDFLREYGPHFTINRMMTFDSVRLRLEREQPLTFLEFNYMLLQAYDFTELYRRYGCVLQMGGSDQWGNMVNGVDLGRRVEKAELFALTAPLITTSEGKKMGKSASGAVWLNADKLPAYDYWQFWRNSDDADVGRFLKLFTELSMGEIHDLEQLTGAAINEAK 993
            + A  +PS  SP   FL+ L ERGF HQC+++  LD+K ST + + GYLGFDATA SLHVG LLQIM+LRHLQ  GH+P+VL+GGGTTKIGDPSGKDE+RK L    I  N+KG+ SVF+KFLTFG G +DA +VNNDEWL +L YL+FLR+YGPHFTINRM+TFDSVRLRLEREQPLT LEFNYM+ QAYDF EL RRY C +Q GGSDQWGN++NGV+L RRV+   +F +TAPLITTS+G+KMGKSASGAVWLNAD L  YDYWQFWRN++D+DVGRFL+LFT+LSM EI  LE L GAAINEAK
Sbjct:   67 ELAESSPSTFSPKSSFLKILQERGFLHQCTDLEALDEKFST-QCVTGYLGFDATASSLHVGSLLQIMLLRHLQSCGHKPLVLLGGGTTKIGDPSGKDESRKMLTADDIDANVKGIGSVFTKFLTFGSGESDAMIVNNDEWLSDLKYLEFLRDYGPHFTINRMLTFDSVRLRLEREQPLTLLEFNYMIFQAYDFLELNRRYSCTVQFGGSDQWGNIINGVELNRRVDGNAVFGVTAPLITTSDGRKMGKSASGAVWLNADLLSPYDYWQFWRNTEDSDVGRFLRLFTDLSMDEIAKLEVLEGAAINEAK 373          
BLAST of mRNA_H-elongata_contig53937.12758.1 vs. uniprot
Match: A0A7S1TRV0_9STRA (Tyrosine--tRNA ligase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TRV0_9STRA)

HSP 1 Score: 447 bits (1149), Expect = 1.640e-153
Identity = 215/308 (69.81%), Postives = 253/308 (82.14%), Query Frame = 1
Query:   82 AANEAPSVKSPFLQTLVERGFYHQCSNVNGLDDKL----STGEVIKGYLGFDATADSLHVGGLLQIMILRHLQKAGHQPIVLVGGGTTKIGDPSGKDETRKFLDEAAIQGNIKGLSSVFSKFLTFGDGPTDAKLVNNDEWLQNLSYLDFLREYGPHFTINRMMTFDSVRLRLEREQPLTFLEFNYMLLQAYDFTELYRRYGCVLQMGGSDQWGNMVNGVDLGRRVEKAELFALTAPLITTSEGKKMGKSASGAVWLNADKLPAYDYWQFWRNSDDADVGRFLKLFTELSMGEIHDLEQLTGAAINEAK 993
            AA +   VKS FL+ +V+RGF++QC+++ GLD KL     TGE +K YLGFDATA SLHVG LLQIMILRHLQKAGHQP+VLVGGGTTK+GDPSGKDE+RK L E  I  NI+G+S VF KFL FG+GP+DAKLVNND+WL  ++YL FLR++G HFTINRM+ FDSV+LRLEREQPLTFLEFNY +LQAYDF EL+ R+G  LQ+GGSDQWGN++NG++LGR+V KAELF LTAPLIT S+G KMGK+ASGAVWLN D L  YDYWQFWRN DDADVG+FLK+FTEL + EI  L  L G  IN AK
Sbjct:   24 AAMDPSEVKSDFLRRMVDRGFFNQCTDLAGLDAKLLEAEKTGEPLKAYLGFDATASSLHVGSLLQIMILRHLQKAGHQPVVLVGGGTTKVGDPSGKDESRKMLSEQDIADNIEGISRVFRKFLAFGEGPSDAKLVNNDDWLSGINYLQFLRDFGRHFTINRMLGFDSVKLRLEREQPLTFLEFNYQILQAYDFVELHGRHGVDLQIGGSDQWGNIINGIELGRKVSKAELFGLTAPLITKSDGTKMGKTASGAVWLNEDLLTPYDYWQFWRNCDDADVGKFLKIFTELPLDEIERLASLKGKEINSAK 331          
BLAST of mRNA_H-elongata_contig53937.12758.1 vs. uniprot
Match: A0A7S4B398_CHRCT (Tyrosine--tRNA ligase n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B398_CHRCT)

HSP 1 Score: 448 bits (1153), Expect = 8.640e-153
Identity = 215/300 (71.67%), Postives = 248/300 (82.67%), Query Frame = 1
Query:   94 APSVKSPFLQTLVERGFYHQCSNVNGLDDKLSTGEVIKGYLGFDATADSLHVGGLLQIMILRHLQKAGHQPIVLVGGGTTKIGDPSGKDETRKFLDEAAIQGNIKGLSSVFSKFLTFGDGPTDAKLVNNDEWLQNLSYLDFLREYGPHFTINRMMTFDSVRLRLEREQPLTFLEFNYMLLQAYDFTELYRRYGCVLQMGGSDQWGNMVNGVDLGRRVEKAELFALTAPLITTSEGKKMGKSASGAVWLNADKLPAYDYWQFWRNSDDADVGRFLKLFTELSMGEIHDLEQLTGAAINEAK 993
            A  +KS FL+TL  RGF HQ +++  LD+KL  GE +  YLGFDATA SLHVG LLQIM+LRH Q+ GH+PIVLVGGGTTK+GDPSGKD +R+ LDEAAIQ NI G+S VFSKFLTFGDGPTDA +VNNDEWL  L YLDFLREYG HFTINRM+ F+SV+ RLERE PL+FLEFNYM+LQAYDF EL RR+  VLQ GGSDQWGN++NGV+LGRRV+   LF LTAPL+TTS+GKKMGK+ASGAVWLNAD LP ++YWQ+WRN  DADVGRFL++FTEL   EI  LE L GA INEAK
Sbjct:  118 AADLKSEFLKTLQWRGFIHQATDMEALDEKLGAGEPVVAYLGFDATASSLHVGSLLQIMLLRHYQRCGHKPIVLVGGGTTKVGDPSGKDASRQLLDEAAIQSNIDGISQVFSKFLTFGDGPTDAIMVNNDEWLSPLRYLDFLREYGRHFTINRMLNFESVKQRLERESPLSFLEFNYMILQAYDFLELNRRHSAVLQFGGSDQWGNIINGVELGRRVDGVSLFGLTAPLLTTSDGKKMGKTASGAVWLNADLLPPFEYWQYWRNVADADVGRFLRIFTELPRAEIERLEALPGAEINEAK 417          
BLAST of mRNA_H-elongata_contig53937.12758.1 vs. uniprot
Match: A0A6B1HI81_9PROT (Tyrosine--tRNA ligase n=4 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A6B1HI81_9PROT)

HSP 1 Score: 437 bits (1125), Expect = 3.080e-150
Identity = 205/296 (69.26%), Postives = 248/296 (83.78%), Query Frame = 1
Query:  106 KSPFLQTLVERGFYHQCSNVNGLDDKLSTGEVIKGYLGFDATADSLHVGGLLQIMILRHLQKAGHQPIVLVGGGTTKIGDPSGKDETRKFLDEAAIQGNIKGLSSVFSKFLTFGDGPTDAKLVNNDEWLQNLSYLDFLREYGPHFTINRMMTFDSVRLRLEREQPLTFLEFNYMLLQAYDFTELYRRYGCVLQMGGSDQWGNMVNGVDLGRRVEKAELFALTAPLITTSEGKKMGKSASGAVWLNADKLPAYDYWQFWRNSDDADVGRFLKLFTELSMGEIHDLEQLTGAAINEAK 993
            KS F+  L ERG+ HQC++ +GLD K + G V+  Y+GFD TADSLHVG LLQIM+LR +Q+ GH+PIVL+GGGTT++GDPSGKD +R+ L +A I  N+ G+ SVF KFLTFGDG  DA + NN +WL +L+Y+DFLREYG HFTINRM+TFDSVRLRL+REQPLTFLEFNYM+LQAYDF EL RRY C LQ+GGSDQWGN+VNGV+LGRRVE+ ELF LT+PLITT+ G KMGK+A GA+WLNAD+L AYDYWQFWRN++DADVGRFL+LFT+L +GEI  LE L GA IN+AK
Sbjct:    5 KSEFMNVLHERGYVHQCTDADGLDGK-AAGGVVTAYIGFDCTADSLHVGSLLQIMLLRRMQQTGHRPIVLMGGGTTRVGDPSGKDSSRQLLSDAQIAANMAGIRSVFEKFLTFGDGLADAVMANNADWLNDLAYVDFLREYGRHFTINRMLTFDSVRLRLDREQPLTFLEFNYMILQAYDFVELARRYDCSLQLGGSDQWGNIVNGVELGRRVEQRELFGLTSPLITTASGAKMGKTAQGAIWLNADRLSAYDYWQFWRNTEDADVGRFLRLFTDLPLGEIARLEALGGAEINDAK 299          
BLAST of mRNA_H-elongata_contig53937.12758.1 vs. uniprot
Match: A0A7S2XYP8_9STRA (Tyrosine--tRNA ligase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYP8_9STRA)

HSP 1 Score: 439 bits (1129), Expect = 1.110e-149
Identity = 206/299 (68.90%), Postives = 250/299 (83.61%), Query Frame = 1
Query:  109 SPFLQTLVERGFYHQCSNVNGLDDKLSTGEV----IKGYLGFDATADSLHVGGLLQIMILRHLQKAGHQPIVLVGGGTTKIGDPSGKDETRKFLDEAAIQGNIKGLSSVFSKFLTFGDGPTDAKLVNNDEWLQNLSYLDFLREYGPHFTINRMMTFDSVRLRLEREQPLTFLEFNYMLLQAYDFTELYRRYGCVLQMGGSDQWGNMVNGVDLGRRVEKAELFALTAPLITTSEGKKMGKSASGAVWLNADKLPAYDYWQFWRNSDDADVGRFLKLFTELSMGEIHDLEQLTGAAINEAK 993
            SPFLQ + +RGF+HQC+N+ GLD  +  GE     +  YLGFDATADSLHVG LLQIMILRHLQK GH+PIVLVGGGTTK+GDPSGKDE+RK L E +IQ NI G++ VF +FLTFG+ PT+A LVNNDEWL  L YL FLR+YGP+FTINRMM ++SV++RL+REQPLTFLEFNYM+LQAYDF EL RR+ C+LQ+GGSDQWGN+VNG DL R+ ++  ++ LTAPLITTS+GKKMGK+A+GA+WLN +KL  Y+YWQFWRN++DADV RFLKLFTELS+ EI  L  + GAAIN+AK
Sbjct:   83 SPFLQIMKKRGFFHQCTNLEGLDKAMLEGEKENKPVSAYLGFDATADSLHVGSLLQIMILRHLQKCGHRPIVLVGGGTTKVGDPSGKDESRKMLTEESIQANIDGIAKVFERFLTFGEQPTEALLVNNDEWLSPLQYLQFLRDYGPYFTINRMMNYESVKVRLDREQPLTFLEFNYMILQAYDFLELRRRHDCILQLGGSDQWGNIVNGCDLNRKADQHTVYGLTAPLITTSDGKKMGKTANGAMWLNKEKLSEYEYWQFWRNTNDADVARFLKLFTELSLEEIDKLTNVEGAAINQAK 381          
BLAST of mRNA_H-elongata_contig53937.12758.1 vs. uniprot
Match: A0A1Z5JPX4_FISSO (Tyrosine--tRNA ligase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JPX4_FISSO)

HSP 1 Score: 438 bits (1126), Expect = 2.440e-149
Identity = 214/310 (69.03%), Postives = 255/310 (82.26%), Query Frame = 1
Query:   67 VYGQQAANEAPSVKSPFLQTLVERGFYHQCSNVNGLDDKLSTGEVIKGYLGFDATADSLHVGGLLQIMILRHLQKAGHQPIVLVGGGTTKIGDPSGKDETRKFLDEAAIQGNIKGLSSVFSKFLTFGD-GPTDAKLVNNDEWLQNLSYLDFLREYGPHFTINRMMTFDSVRLRLEREQPLTFLEFNYMLLQAYDFTELYRRYGCVLQMGGSDQWGNMVNGVDLGRRVEKAELFALTAPLITTSEGKKMGKSASGAVWLNADKLPAYDYWQFWRNSDDADVGRFLKLFTELSMGEIHDLEQLTGAAINEAK 993
            +Y ++A +    +KSPFLQTL +RGF HQC+ +  LD KL  G     YLGFDATADSLHVG LLQIMILRHLQK+GH+PIVLVGGGTTK+GDP+GKDE+R  L E AIQ NI+G+SSVF KFL FGD  PTDA  VNND+WL  L YL FLR+YG HFTINRM++F+SV+ RL RE PL+FLEFNYM+LQAYDF ELYRRY  +LQ+GGSDQWGNMV+G +LGRR+E A+LFALTAPL+TTS+GKKMGK+A+GAVWLN+ KL  YDYWQFWRN+ D DV +FLKLFTEL + +I +LE+L GA IN+AK
Sbjct:   65 IYAREA-DALSKIKSPFLQTLRDRGFLHQCTGITELDAKLCEGTQA-AYLGFDATADSLHVGSLLQIMILRHLQKSGHKPIVLVGGGTTKVGDPTGKDESRAMLTEEAIQKNIEGISSVFQKFLVFGDTNPTDAVTVNNDDWLSELKYLQFLRDYGTHFTINRMLSFESVKQRLAREAPLSFLEFNYMILQAYDFLELYRRYNTILQLGGSDQWGNMVSGTELGRRIEGAQLFALTAPLMTTSDGKKMGKTANGAVWLNSSKLSEYDYWQFWRNTADDDVVKFLKLFTELPLEQIAELEKLQGADINKAK 372          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig53937.12758.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L673_9PHAE3.280e-20285.80Tyrosine--tRNA ligase n=2 Tax=Ectocarpus TaxID=287... [more]
A0A835Z418_9STRA4.560e-16073.60Tyrosine--tRNA ligase n=1 Tax=Tribonema minus TaxI... [more]
A0A7S3XVK9_HETAK1.450e-15672.39Tyrosine--tRNA ligase n=1 Tax=Heterosigma akashiwo... [more]
L1JX61_GUITC1.330e-15471.62Tyrosine--tRNA ligase n=3 Tax=Guillardia theta Tax... [more]
A0A7S2CQP3_9STRA5.380e-15470.13Tyrosine--tRNA ligase n=2 Tax=Dictyocha speculum T... [more]
A0A7S1TRV0_9STRA1.640e-15369.81Tyrosine--tRNA ligase n=1 Tax=Phaeomonas parva Tax... [more]
A0A7S4B398_CHRCT8.640e-15371.67Tyrosine--tRNA ligase n=1 Tax=Chrysotila carterae ... [more]
A0A6B1HI81_9PROT3.080e-15069.26Tyrosine--tRNA ligase n=4 Tax=Rhodospirillaceae ba... [more]
A0A7S2XYP8_9STRA1.110e-14968.90Tyrosine--tRNA ligase n=1 Tax=Fibrocapsa japonica ... [more]
A0A1Z5JPX4_FISSO2.440e-14969.03Tyrosine--tRNA ligase n=2 Tax=Fistulifera solaris ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig53937contigH-elongata_contig53937:1549..3806 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score567.8
Seed ortholog evalue3.4e-159
Seed eggNOG ortholog2880.D8LPN5
Preferred nameMSY1
KEGG rclassRC00055,RC00523
KEGG koko:K01866
KEGG ReactionR02918
KEGG Pathwayko00970,map00970
KEGG ModuleM00359,M00360
GOsGO:0000049,GO:0000166,GO:0000372,GO:0000375,GO:0000376,GO:0000959,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0004812,GO:0004831,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006412,GO:0006418,GO:0006437,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008380,GO:0009058,GO:0009059,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010604,GO:0010628,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019219,GO:0019222,GO:0019538,GO:0019752,GO:0030554,GO:0031323,GO:0031325,GO:0031974,GO:0032543,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033120,GO:0034337,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0042802,GO:0042803,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0043484,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045935,GO:0046483,GO:0046983,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0061635,GO:0065007,GO:0065008,GO:0070013,GO:0070127,GO:0070184,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097367,GO:0140053,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.tyrosyl-tRNA aminoacylation
EggNOG OGsCOG0162@1,KOG2623@2759
EC6.1.1.1
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionTyrosyl-tRNA synthetase
Ec32 orthologEc-18_001870.1
Exons5
Model size993
Cds size993
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig53937.12758.1prot_H-elongata_contig53937.12758.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig53937 1549..3806 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930878.753721-CDS-H-elongata_contig53937:1548..17871622930878.753721-CDS-H-elongata_contig53937:1548..1787Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig53937 1549..1787 +
1691679608.5721776-CDS-H-elongata_contig53937:1548..17871691679608.5721776-CDS-H-elongata_contig53937:1548..1787Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig53937 1549..1787 +
1622930878.7728574-CDS-H-elongata_contig53937:1998..21551622930878.7728574-CDS-H-elongata_contig53937:1998..2155Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig53937 1999..2155 +
1691679608.584573-CDS-H-elongata_contig53937:1998..21551691679608.584573-CDS-H-elongata_contig53937:1998..2155Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig53937 1999..2155 +
1622930878.7864325-CDS-H-elongata_contig53937:2778..30531622930878.7864325-CDS-H-elongata_contig53937:2778..3053Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig53937 2779..3053 +
1691679608.5945177-CDS-H-elongata_contig53937:2778..30531691679608.5945177-CDS-H-elongata_contig53937:2778..3053Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig53937 2779..3053 +
1622930878.800978-CDS-H-elongata_contig53937:3321..35231622930878.800978-CDS-H-elongata_contig53937:3321..3523Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig53937 3322..3523 +
1691679608.6085572-CDS-H-elongata_contig53937:3321..35231691679608.6085572-CDS-H-elongata_contig53937:3321..3523Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig53937 3322..3523 +
1622930878.8125563-CDS-H-elongata_contig53937:3686..38061622930878.8125563-CDS-H-elongata_contig53937:3686..3806Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig53937 3687..3806 +
1691679608.6228442-CDS-H-elongata_contig53937:3686..38061691679608.6228442-CDS-H-elongata_contig53937:3686..3806Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig53937 3687..3806 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig53937.12758.1

>prot_H-elongata_contig53937.12758.1 ID=prot_H-elongata_contig53937.12758.1|Name=mRNA_H-elongata_contig53937.12758.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=331bp
AASRTRVGQLLSVDTPMEGHPLVYGQQAANEAPSVKSPFLQTLVERGFYH
QCSNVNGLDDKLSTGEVIKGYLGFDATADSLHVGGLLQIMILRHLQKAGH
QPIVLVGGGTTKIGDPSGKDETRKFLDEAAIQGNIKGLSSVFSKFLTFGD
GPTDAKLVNNDEWLQNLSYLDFLREYGPHFTINRMMTFDSVRLRLEREQP
LTFLEFNYMLLQAYDFTELYRRYGCVLQMGGSDQWGNMVNGVDLGRRVEK
AELFALTAPLITTSEGKKMGKSASGAVWLNADKLPAYDYWQFWRNSDDAD
VGRFLKLFTELSMGEIHDLEQLTGAAINEAK
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mRNA from alignment at H-elongata_contig53937:1549..3806+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig53937.12758.1 ID=mRNA_H-elongata_contig53937.12758.1|Name=mRNA_H-elongata_contig53937.12758.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2258bp|location=Sequence derived from alignment at H-elongata_contig53937:1549..3806+ (Himanthalia elongata Himel1 dioecious)
GCTGCAAGTCGAACAAGGGTTGGGCAATTATTGTCTGTCGATACACCAAT GGAAGGGCATCCACTTGTTTATGGACAACAAGCGGCCAATGAAGCTCCCA GTGTGAAGTCTCCTTTCCTCCAGACTCTTGTGGAGCGAGGTTTCTATCAC CAGTGTTCCAACGTTAATGGCCTTGATGATAAGCTAAGCACCGGCGAGGT GATCAAGGGCTATTTAGGCTTCGACGCAACAGCCGACAGGTGCACAACAA CGCGCTCTATCCTACTAAATCCGAGGTTGATCTCGTGTCATGCCGTGGCT TGAACTTGAACCTGGCAGCAGCCCGTGGACGACCTGCTTACGAAGATGCA GACGCCGTGTCCTAAATCGTGTATATTATTGTTGTACACGTGTACGACCG CACATGTTCTGATCTCAAGTTTGCCGATCCGACCATTTCCGCACCCGCAG CCTGCATGTCGGCGGCCTACTGCAGATCATGATCCTGCGACACCTTCAAA AAGCAGGTCACCAGCCAATCGTTCTAGTCGGAGGAGGCACCACTAAGATT GGAGATCCTTCGGGCAAGGATGAGACTCGAAAGTTCCTGGACGAGGCAGC AATCCAGGTCGTGGCGAACTCTCTCACTTTCCAAGACGATCTCTGACCTC AGCGGTTTTTATTTGACGGGTGCGAGGAGCTTTGATTCAAGTAGTTCTAG TTCCAATAAAGGAACCCGGGAAAATTGAATATGGGGCAACGTTCCATCGT ACTCGCAATATGCCCCTATGGGTCTTCACATTGAGCAGAGTAAGGTCAAC CGGATTTGGTTGCCTCCTTCTTGTGGTCAACTTAACATGAAACTTATAAT TAAGTATGTTCTTAGCAAGGACAAGGCCTTCAACACTTTCATACATTTTT GTGCGAGTTCGCTGGTCTATTCGTTGGACCGTAGGCAGTGCTTTCAGATT CTTGGATTGGAGTTCTAGGGAGTTTGTGTCTGTTTTCTGGTGGCTTGCAG CACCAAAATTCAACAAAATAACAGGAAACACAGCCGTGTTCGAAATCGGT GGACAATATCAAGCTGTTTAATAGTGGTCCCTCTAAAGCATATATTACGT ACGGAACACTATTATAGTGAATCTAGAATACACCAGTTACCGCTCAACGG ACCGTGTATGATCAGCGAGTGTGAAGCTACTGCTGCTATTTGACCTTTGA TTGCATCTTCTGCACAACTAATCTCTACAGGGAAATATCAAAGGACTCTC TTCTGTGTTCTCAAAATTCTTGACTTTCGGGGATGGGCCAACGGACGCAA AGCTAGTTAACAACGACGAGTGGTTACAGAACCTCTCGTATCTCGACTTT CTTCGCGAATACGGGCCGCACTTTACCATCAACCGCATGATGACGTTCGA CAGCGTGCGTTTACGCTTGGAACGCGAGCAGCCCTTGACCTTCTTGGAGT TCAACTATATGTTGCTACAGGCGTACGACTTCACGGAACTGTACCGGCGC TATGGGTGAGACTGATGGATGTTTAGCTGTGACTGAGTAACATGGCCGAA CCTTGATTGAGAGTTTCGGGTTGAATGCTGTGCTGTTGCCATGTGCAATA TCGAACAAATGTGCGTTCCCATTCCACGTAACCCTGTGTTTTTTCGTTGA TGGGGCGAGAGTTGCGCGTGTGCTAAATGCAATTGTAGTAGTTTGGGAAG AAAAGTCGGGAGTGCAAACAGCGCGATGCGCCATTCCCAATCGCGACTTC GGAGATAAAATGTTGCTCTTCAGGTGCGTGCTGCAAATGGGTGGTTCGGA TCAATGGGGCAACATGGTGAACGGGGTGGATTTGGGTCGAAGGGTTGAGA AAGCCGAGCTTTTTGCCCTTACCGCACCTCTCATTACGACATCCGAAGGA AAGAAAATGGGCAAATCGGCTTCTGGTGCTGTTTGGCTTAACGCCGACAA GCTCCCCGCGTACGACTACTGGCAGGTATGACAACCATTTCTGAATTGAA TTTCATATACAGTATTGTCATTTCTGCGCTTTTCAGTACAGTAGCAACAA GAAGCATCGCGATTCCCGCAGTCTTGTCACCGATAATACCGATATTGGTC AAGATCAACTGAAGACTAGCGCCGCAACCGCCGCGTAGTTCTGGCGAAAT AGCGATGATGCTGACGTCGGACGGTTTCTCAAGCTCTTTACGGAATTATC CATGGGCGAAATACACGATCTGGAGCAGCTTACCGGGGCCGCCATCAACG AAGCGAAG
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Coding sequence (CDS) from alignment at H-elongata_contig53937:1549..3806+

>mRNA_H-elongata_contig53937.12758.1 ID=mRNA_H-elongata_contig53937.12758.1|Name=mRNA_H-elongata_contig53937.12758.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1986bp|location=Sequence derived from alignment at H-elongata_contig53937:1549..3806+ (Himanthalia elongata Himel1 dioecious)
GCTGCAAGTCGAACAAGGGTTGGGCAATTATTGTCTGTCGATACACCAAT
GGAAGGGCATCCACTTGTTTATGGACAACAAGCGGCCAATGAAGCTCCCA
GTGTGAAGTCTCCTTTCCTCCAGACTCTTGTGGAGCGAGGTTTCTATCAC
CAGTGTTCCAACGTTAATGGCCTTGATGATAAGCTAAGCACCGGCGAGGT
GATCAAGGGCTATTTAGGCTTCGACGCAACAGCCGACAGGCTGCAAGTCG
AACAAGGGTTGGGCAATTATTGTCTGTCGATACACCAATGGAAGGGCATC
CACTTGTTTATGGACAACAAGCGGCCAATGAAGCTCCCAGTGTGAAGTCT
CCTTTCCTCCAGACTCTTGTGGAGCGAGGTTTCTATCACCAGTGTTCCAA
CGTTAATGGCCTTGATGATAAGCTAAGCACCGGCGAGGTGATCAAGGGCT
ATTTAGGCTTCGACGCAACAGCCGACAGCCTGCATGTCGGCGGCCTACTG
CAGATCATGATCCTGCGACACCTTCAAAAAGCAGGTCACCAGCCAATCGT
TCTAGTCGGAGGAGGCACCACTAAGATTGGAGATCCTTCGGGCAAGGATG
AGACTCGAAAGTTCCTGGACGAGGCAGCAATCCAGCCTGCATGTCGGCGG
CCTACTGCAGATCATGATCCTGCGACACCTTCAAAAAGCAGGTCACCAGC
CAATCGTTCTAGTCGGAGGAGGCACCACTAAGATTGGAGATCCTTCGGGC
AAGGATGAGACTCGAAAGTTCCTGGACGAGGCAGCAATCCAGGGAAATAT
CAAAGGACTCTCTTCTGTGTTCTCAAAATTCTTGACTTTCGGGGATGGGC
CAACGGACGCAAAGCTAGTTAACAACGACGAGTGGTTACAGAACCTCTCG
TATCTCGACTTTCTTCGCGAATACGGGCCGCACTTTACCATCAACCGCAT
GATGACGTTCGACAGCGTGCGTTTACGCTTGGAACGCGAGCAGCCCTTGA
CCTTCTTGGAGTTCAACTATATGTTGCTACAGGCGTACGACTTCACGGAA
CTGTACCGGCGCTATGGGGAAATATCAAAGGACTCTCTTCTGTGTTCTCA
AAATTCTTGACTTTCGGGGATGGGCCAACGGACGCAAAGCTAGTTAACAA
CGACGAGTGGTTACAGAACCTCTCGTATCTCGACTTTCTTCGCGAATACG
GGCCGCACTTTACCATCAACCGCATGATGACGTTCGACAGCGTGCGTTTA
CGCTTGGAACGCGAGCAGCCCTTGACCTTCTTGGAGTTCAACTATATGTT
GCTACAGGCGTACGACTTCACGGAACTGTACCGGCGCTATGGGTGCGTGC
TGCAAATGGGTGGTTCGGATCAATGGGGCAACATGGTGAACGGGGTGGAT
TTGGGTCGAAGGGTTGAGAAAGCCGAGCTTTTTGCCCTTACCGCACCTCT
CATTACGACATCCGAAGGAAAGAAAATGGGCAAATCGGCTTCTGGTGCTG
TTTGGCTTAACGCCGACAAGCTCCCCGCGTACGACTACTGGCAGGTGCGT
GCTGCAAATGGGTGGTTCGGATCAATGGGGCAACATGGTGAACGGGGTGG
ATTTGGGTCGAAGGGTTGAGAAAGCCGAGCTTTTTGCCCTTACCGCACCT
CTCATTACGACATCCGAAGGAAAGAAAATGGGCAAATCGGCTTCTGGTGC
TGTTTGGCTTAACGCCGACAAGCTCCCCGCGTACGACTACTGGCAGTTCT
GGCGAAATAGCGATGATGCTGACGTCGGACGGTTTCTCAAGCTCTTTACG
GAATTATCCATGGGCGAAATACACGATCTGGAGCAGCTTACCGGGGCCGC
CATCAACGAAGCGAAGTTCTGGCGAAATAGCGATGATGCTGACGTCGGAC
GGTTTCTCAAGCTCTTTACGGAATTATCCATGGGCGAAATACACGATCTG
GAGCAGCTTACCGGGGCCGCCATCAACGAAGCGAAG
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