mRNA_H-elongata_contig53713.12729.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig53713.12729.1 vs. uniprot
Match: A0A6H5K9S3_9PHAE (Methyltransf_25 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K9S3_9PHAE) HSP 1 Score: 248 bits (634), Expect = 1.860e-79 Identity = 114/137 (83.21%), Postives = 123/137 (89.78%), Query Frame = 1
Query: 1 DRLSKQQEYIRSMQDWYSFKGETKDFYGIDMSVLEAVYEEEQRGYYILSSFWAELDKDQLLGEPVAVKTFDMHTCTLAEVQGVDETAFSIRLDSSVRASGFAGWFTADFHGTEETPCPCQVTFSTGPESGNTHWGQQ 411
DRLSKQQEYIR+MQDWYSFKGETK+FYG+DM+VLEAVYEEEQRGYYILSSFWAELDKDQ+LGEPV V+TFDMHTCTL +VQGVDET SI L+ R SGFAGWFTADFHGTE PCPC VT STGPE+G THWGQQ
Sbjct: 200 DRLSKQQEYIRTMQDWYSFKGETKEFYGVDMTVLEAVYEEEQRGYYILSSFWAELDKDQVLGEPVVVQTFDMHTCTLEDVQGVDETNVSISLEEDARVSGFAGWFTADFHGTEANPCPCPVTLSTGPENGYTHWGQQ 336
BLAST of mRNA_H-elongata_contig53713.12729.1 vs. uniprot
Match: A0A835YPE5_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPE5_9STRA) HSP 1 Score: 185 bits (470), Expect = 4.000e-55 Identity = 84/137 (61.31%), Postives = 102/137 (74.45%), Query Frame = 1
Query: 1 DRLSKQQEYIRSMQDWYSFKGETKDFYGIDMSVLEAVYEEEQRGYYILSSFWAELDKDQLLGEPVAVKTFDMHTCTLAEVQGVDETAFSIRLDSSVRASGFAGWFTADFHGTEETPCPCQVTFSTGPESGNTHWGQQ 411
DRL+K EY++S Q+W+ FK E + +Y DM+VLE VYEEEQ+GYYILSSFWAEL DQ +G+ +K FDMHTCTL +VQGV+ET F I ++ R SGFAGWFTADF GTE P P V ST P++G THWGQQ
Sbjct: 169 DRLAKAAEYLQSTQEWHRFKREMRQYYDCDMNVLEGVYEEEQKGYYILSSFWAELQPDQCVGQGAMIKHFDMHTCTLEDVQGVEETPFRINVEHDCRVSGFAGWFTADFRGTEANPLPVPVLLSTAPDNGYTHWGQQ 305
BLAST of mRNA_H-elongata_contig53713.12729.1 vs. uniprot
Match: A0A7S2D4B8_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D4B8_9STRA) HSP 1 Score: 150 bits (380), Expect = 1.520e-43 Identity = 69/133 (51.88%), Postives = 89/133 (66.92%), Query Frame = 1
Query: 13 KQQEYIRSMQDWYSFKGETKDFYGIDMSVLEAVYEEEQRGYYILSSFWAELDKDQLLGEPVAVKTFDMHTCTLAEVQGVDETAFSIRLDSSVRASGFAGWFTADFHGTEETPCPCQVTFSTGPESGNTHWGQQ 411
K Q+ +SM DW +F ET++ YG+DMS L+ +E+EQR YY+ SS W EL+ DQ++G+P AVK D+HTCT+ + GVD FS D+ + SGFAGWF DF G+EE P VT ST P G THWGQQ
Sbjct: 2 KLQDLDQSMGDWDTFTNETRNLYGVDMSCLDQPFEKEQRDYYLSSSIWCELNGDQVIGQPAAVKHMDLHTCTIKDALGVDPAPFSFTTDTPTKVSGFAGWFDTDFAGSEENPATEVVTLSTAPAIGYTHWGQQ 134
BLAST of mRNA_H-elongata_contig53713.12729.1 vs. uniprot
Match: A0A482SBI8_9ARCH (Class I SAM-dependent methyltransferase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SBI8_9ARCH) HSP 1 Score: 140 bits (354), Expect = 9.010e-38 Identity = 61/137 (44.53%), Postives = 86/137 (62.77%), Query Frame = 1
Query: 1 DRLSKQQEYIRSMQDWYSFKGETKDFYGIDMSVLEAVYEEEQRGYYILSSFWAELDKDQLLGEPVAVKTFDMHTCTLAEVQGVDETAFSIRLDSSVRASGFAGWFTADFHGTEETPCPCQVTFSTGPESGNTHWGQQ 411
DR K E+ SM+DW F E K +Y +D+ L + +EQ YY+ S W EL + ++G+PV +K D++TCTL + +GVD + I + + SGFAGWFT DF+G+ +P +V STGPE+GNTHWGQQ
Sbjct: 183 DRQCKIDEFTSSMRDWKVFSEEMKHYYNVDVGALTNTFHKEQEEYYVYSGLWTELKTEHVVGQPVIIKKLDLNTCTLKDAEGVDTVPYDIEIPFNATVSGFAGWFTVDFNGSVPSPVNKRVVLSTGPEAGNTHWGQQ 319
BLAST of mRNA_H-elongata_contig53713.12729.1 vs. uniprot
Match: S8CJC7_9LAMI (Uncharacterized protein (Fragment) n=1 Tax=Genlisea aurea TaxID=192259 RepID=S8CJC7_9LAMI) HSP 1 Score: 118 bits (296), Expect = 2.800e-29 Identity = 56/128 (43.75%), Postives = 76/128 (59.38%), Query Frame = 1
Query: 34 SMQDWYSFKGETKDFYGIDMSVLEAVYEEEQRGYYILSSFWAELDKDQLLGEPVAVKTFDMHTCTLAEVQGVDETAFSIRLDSSVRASGFAGWFTADFHGTEETPCPCQVTFSTGP-ESGNTHWGQQA 414
+M DWY F G+TK +YG+DMSVL Y EEQR YY+ + W+ L +Q++G P +K D T T+ +V+ V T S + R GFAGWF F G+ ++P ++ ST P E THWGQQA
Sbjct: 185 AMNDWYGFVGDTKTYYGVDMSVLTDSYTEEQRRYYLQTCQWSNLHPNQIIGSPAIIKEIDCTTATIDDVRDVSATISSSVTVENARFCGFAGWFDVHFRGSNDSPAEQEIELSTAPDEEYGTHWGQQA 312
BLAST of mRNA_H-elongata_contig53713.12729.1 vs. uniprot
Match: A0A6H5K1X3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1X3_9PHAE) HSP 1 Score: 117 bits (294), Expect = 2.070e-28 Identity = 58/132 (43.94%), Postives = 78/132 (59.09%), Query Frame = 1
Query: 22 EYIRSMQDWYSFKGETKDFYGIDMSVLEAVYEEEQRGYYILSSFWAELDKDQLLGEPVAVKTFDMHTCTLAEVQGVDETAFSIRL-DSSVRASGFAGWFTADFHGTEET-PCPCQVTFSTGPESGNTHWGQQ 411
+Y S+ W +F YG+DMS L+ YEEE G + LSS W EL Q++ +PV VK D+HTC+L + +G++ T FS L + + +GFAGWF F G +E P V FST P +G THWGQQ
Sbjct: 270 DYQNSLSGWSTFSEHAMQRYGVDMSGLDKAYEEECAGVFSLSSLWRELAGHQVVSDPVTVKALDLHTCSLEDTRGLENTLFSFPLRNGAPPVTGFAGWFDVSFRGRDEVAPLQRPVEFSTAPAAGYTHWGQQ 401
BLAST of mRNA_H-elongata_contig53713.12729.1 vs. uniprot
Match: A0A7R9WFB0_9STRA (Hypothetical protein n=2 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WFB0_9STRA) HSP 1 Score: 117 bits (294), Expect = 3.780e-28 Identity = 64/149 (42.95%), Postives = 84/149 (56.38%), Query Frame = 1
Query: 22 EYIRSMQDWYSFKGETKDFYGIDMSVLEAVYEEEQRGYYILSSFWAELDKDQLLGEPVAVKTFDMHTCTLAEVQGV------DETAFSIRLDSSVRA---SGFAGWFTADFH----------GTEETPCPCQVTFSTGPESGNTHWGQQ 411
EY +M DW F T+ YG+DM++LE +E EQR YY+LSS W+EL +Q+L +PVA+K FDM TCT+ + +G+ D AF +D+ SG AGWF DF G P P + ST PE+G THWGQQ
Sbjct: 352 EYAGAMGDWTEFVDSTRAMYGVDMNILEKDFEREQREYYLLSSHWSELGPEQVLCDPVAIKEFDMATCTIEDARGLSVEEGPDVGAFDFDVDADAVVGPISGVAGWFDVDFKSRTDNVGIEGGAPALPAPAHL--STAPENGYTHWGQQ 498
BLAST of mRNA_H-elongata_contig53713.12729.1 vs. uniprot
Match: A0A7J9HA35_9ROSI (Uncharacterized protein n=1 Tax=Gossypium harknessii TaxID=34285 RepID=A0A7J9HA35_9ROSI) HSP 1 Score: 111 bits (277), Expect = 6.320e-28 Identity = 53/134 (39.55%), Postives = 76/134 (56.72%), Query Frame = 1
Query: 13 KQQEYIRSMQDWYSFKGETKDFYGIDMSVLEAVYEEEQRGYYILSSFWAELDKDQLLGEPVAVKTFDMHTCTLAEVQGVDETAFSIRLDSSVRASGFAGWFTADFHGTEETPCPCQVTFSTGPESGN-THWGQQ 411
K+ +Y +M DWY F +TKD+YG+DMSVL + EQ YY+ +S W+ L +Q++G +K D T ++ ++ V + S +S R GFAGWF F G E P ++ +T P S N THWGQQ
Sbjct: 14 KKNDYEAAMDDWYGFLEDTKDYYGVDMSVLTRPFSNEQEKYYLQTSLWSNLHPNQVIGTAAVIKEIDCLTASVNDILEVKSSFSSAISMASTRLCGFAGWFDVHFRGRGEDPAQKEIELTTAPSSNNGTHWGQQ 147
BLAST of mRNA_H-elongata_contig53713.12729.1 vs. uniprot
Match: A0A5A7RB86_STRAF (Arginine N-methyltransferase family protein n=1 Tax=Striga asiatica TaxID=4170 RepID=A0A5A7RB86_STRAF) HSP 1 Score: 114 bits (286), Expect = 8.750e-28 Identity = 53/134 (39.55%), Postives = 80/134 (59.70%), Query Frame = 1
Query: 13 KQQEYIRSMQDWYSFKGETKDFYGIDMSVLEAVYEEEQRGYYILSSFWAELDKDQLLGEPVAVKTFDMHTCTLAEVQGVDETAFSIRLDSSVRASGFAGWFTADFHGTEETPCPCQVTFSTGP-ESGNTHWGQQ 411
K +Y +M+DW+SF ETK++YG+DMSVL + +EQR YY+ +S W L +Q++G PV +K D T ++ +++ V + S + R GFAGWF F G+ + P ++ +T P E THWGQQ
Sbjct: 176 KMNDYEEAMKDWHSFVNETKNYYGVDMSVLTNPFNQEQRKYYLQTSIWNNLHPNQIIGTPVIIKEIDCSTTSVDDIRSVRASISSSITQENARFCGFAGWFDVHFRGSSKNPAQQEIELTTAPDEYFGTHWGQQ 309
BLAST of mRNA_H-elongata_contig53713.12729.1 vs. uniprot
Match: A0A834LQW8_RHOSS (Uncharacterized protein n=2 Tax=Rhododendron TaxID=4346 RepID=A0A834LQW8_RHOSS) HSP 1 Score: 112 bits (280), Expect = 6.850e-27 Identity = 55/134 (41.04%), Postives = 74/134 (55.22%), Query Frame = 1
Query: 13 KQQEYIRSMQDWYSFKGETKDFYGIDMSVLEAVYEEEQRGYYILSSFWAELDKDQLLGEPVAVKTFDMHTCTLAEVQGVDETAFSIRLDSSVRASGFAGWFTADFHGTEETPCPCQVTFSTGP-ESGNTHWGQQ 411
K+ +Y +M DW F GETK +YG+DMSVL Y EEQ+ YY+ +S W L Q+LG P VK D T T+ ++ + + S R GF GWF F G++E P ++ +T P E THWGQQ
Sbjct: 188 KKGDYEGAMDDWICFLGETKTYYGVDMSVLTKPYSEEQKKYYLQTSLWNNLHPKQVLGRPAIVKEIDCSTATVDDILNIRASVSSSITAEQTRLCGFGGWFDVHFRGSKENPAQHEIELTTAPSEDYCTHWGQQ 321 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig53713.12729.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig53713.12729.1 >prot_H-elongata_contig53713.12729.1 ID=prot_H-elongata_contig53713.12729.1|Name=mRNA_H-elongata_contig53713.12729.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=140bp DRLSKQQEYIRSMQDWYSFKGETKDFYGIDMSVLEAVYEEEQRGYYILSSback to top mRNA from alignment at H-elongata_contig53713:2011..3788- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig53713.12729.1 ID=mRNA_H-elongata_contig53713.12729.1|Name=mRNA_H-elongata_contig53713.12729.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1778bp|location=Sequence derived from alignment at H-elongata_contig53713:2011..3788- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig53713:2011..3788- >mRNA_H-elongata_contig53713.12729.1 ID=mRNA_H-elongata_contig53713.12729.1|Name=mRNA_H-elongata_contig53713.12729.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=840bp|location=Sequence derived from alignment at H-elongata_contig53713:2011..3788- (Himanthalia elongata Himel1 dioecious)back to top |