mRNA_H-elongata_contig53426.12683.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig53426.12683.1 vs. uniprot
Match: A0A8B8G1F8_9HEMI (zinc finger BED domain-containing protein 1-like n=4 Tax=Aphididae TaxID=27482 RepID=A0A8B8G1F8_9HEMI) HSP 1 Score: 79.7 bits (195), Expect = 1.480e-16 Identity = 47/127 (37.01%), Postives = 71/127 (55.91%), Query Frame = 1
Query: 13 LRTYVASIDPRPSPVIISADE-----LKRQNILW-----GASMAEFELSRFDAEQSIKHTRSSTNALKWWLARRDEHPTLYSVACVYLAVPTTSGSSERVFSAAGNIVTKKRNMLSPENVNNLVFLH 363
+R++V + +P I + ++ LK N+L + ++F S R N L+WW R +++P + ++A YLA+P+TS SSER FS AGNIVT KR+ L PENV+ LVFL+
Sbjct: 12 IRSHVLQLIESVAPTITNPNDTEENDLKMNNVLAIIYKDHTNSTNDAFTQFTEYLSEPKLRFDLNPLEWWRTREEKYPAIATIAKKYLAIPSTSASSERCFSTAGNIVTPKRSCLLPENVDMLVFLY 138
BLAST of mRNA_H-elongata_contig53426.12683.1 vs. uniprot
Match: UPI0005F55F89 (zinc finger BED domain-containing protein 1-like n=1 Tax=Vollenhovia emeryi TaxID=411798 RepID=UPI0005F55F89) HSP 1 Score: 82.4 bits (202), Expect = 1.660e-16 Identity = 43/79 (54.43%), Postives = 52/79 (65.82%), Query Frame = 1
Query: 127 SRFDAEQSIKHTRSSTNALKWWLARRDEHPTLYSVACVYLAVPTTSGSSERVFSAAGNIVTKKRNMLSPENVNNLVFLH 363
S+F A S R + L+WW R D+ P L +A YL++P TS S+ER FS AGNIVT KRN LSPENVN LVFL+
Sbjct: 191 SQFQAYLSEPQLRVDLDYLEWWKTRADKFPALAILARKYLSIPATSASAERTFSTAGNIVTPKRNCLSPENVNMLVFLY 269
BLAST of mRNA_H-elongata_contig53426.12683.1 vs. uniprot
Match: A0A8B7EA18_HYDVU (zinc finger BED domain-containing protein DAYSLEEPER-like n=1 Tax=Hydra vulgaris TaxID=6087 RepID=A0A8B7EA18_HYDVU) HSP 1 Score: 75.9 bits (185), Expect = 5.630e-15 Identity = 41/88 (46.59%), Postives = 54/88 (61.36%), Query Frame = 1
Query: 100 GASMAEFELSRFDAEQSIKHTRSSTNALKWWLARRDEHPTLYSVACVYLAVPTTSGSSERVFSAAGNIVTKKRNMLSPENVNNLVFLH 363
G S E EL + + S+T+ +KWW A P L+ VA YLA+P TS SSERVFSAAG++VT R L+P+NV +V+LH
Sbjct: 11 GKSNIEIELDTYKGLP--RPDSSNTDIIKWWEAHAKRIPLLFQVARKYLAIPLTSASSERVFSAAGSVVTDSRLKLNPQNVGKIVYLH 96
BLAST of mRNA_H-elongata_contig53426.12683.1 vs. uniprot
Match: A0A1A7ZCN3_NOTFU (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Nothobranchius furzeri TaxID=105023 RepID=A0A1A7ZCN3_NOTFU) HSP 1 Score: 74.3 bits (181), Expect = 5.930e-15 Identity = 38/71 (53.52%), Postives = 49/71 (69.01%), Query Frame = 1
Query: 154 KHTR-SSTNALKWWLARRDEHPTLYSVACVYLAVPTTSGSSERVFSAAGNIVTKKRNMLSPENVNNLVFLH 363
+HT STN L+WW + P+L S+A YL VP TS SER+FS+AGNIV+KKR LSPE+++ L F H
Sbjct: 24 EHTSPKSTNPLQWWKSNEARFPSLASLAKSYLCVPATSTPSERLFSSAGNIVSKKRTSLSPEHIDMLTFFH 94
BLAST of mRNA_H-elongata_contig53426.12683.1 vs. uniprot
Match: UPI001C9A9669 (E3 SUMO-protein ligase ZBED1-like n=2 Tax=Colletes gigas TaxID=935657 RepID=UPI001C9A9669) HSP 1 Score: 79.3 bits (194), Expect = 7.680e-15 Identity = 39/66 (59.09%), Postives = 45/66 (68.18%), Query Frame = 1
Query: 163 RSSTNALKWWLARRDEHPTLYSVACVYLAVPTTSGSSERVFSAAGNIVTKKRNMLSPENVNNLVFL 360
R N +WW AR +++P + VA YL +P TS SER FS AGNIVTKKRN L PENVN LVFL
Sbjct: 410 RFDLNPFEWWKARTNKYPAISEVAKKYLTIPATSAMSERCFSCAGNIVTKKRNRLLPENVNTLVFL 475
BLAST of mRNA_H-elongata_contig53426.12683.1 vs. uniprot
Match: A0A3L8E0S8_OOCBI (Dimer_Tnp_hAT domain-containing protein n=3 Tax=Ooceraea biroi TaxID=2015173 RepID=A0A3L8E0S8_OOCBI) HSP 1 Score: 78.2 bits (191), Expect = 1.580e-14 Identity = 41/78 (52.56%), Postives = 49/78 (62.82%), Query Frame = 1
Query: 127 SRFDAEQSIKHTRSSTNALKWWLARRDEHPTLYSVACVYLAVPTTSGSSERVFSAAGNIVTKKRNMLSPENVNNLVFL 360
S+ A + R + L+WW R D+ P L +A YL +P TS S+ER FS AGNIVT KRN LSPENVN LVFL
Sbjct: 304 SQLQAYLTEPQLRFDLDHLEWWKTRADKFPALAILAKKYLCIPATSASAERTFSTAGNIVTSKRNCLSPENVNMLVFL 381
BLAST of mRNA_H-elongata_contig53426.12683.1 vs. uniprot
Match: UPI000B937505 (zinc finger BED domain-containing protein 1-like n=2 Tax=Aphidinae TaxID=133076 RepID=UPI000B937505) HSP 1 Score: 74.3 bits (181), Expect = 2.080e-14 Identity = 39/81 (48.15%), Postives = 51/81 (62.96%), Query Frame = 1
Query: 121 ELSRFDAEQSIKHTRSSTNALKWWLARRDEHPTLYSVACVYLAVPTTSGSSERVFSAAGNIVTKKRNMLSPENVNNLVFLH 363
+ + AE ++ T + +WW R ++P + +A YL +P TS SSER FS AGNIVT+KR LSPENVN LVFLH
Sbjct: 43 QFENYIAEPQLRFT---LDPKEWWKTRFSKYPVIGDLAKKYLTIPATSVSSERCFSTAGNIVTRKRASLSPENVNMLVFLH 120
BLAST of mRNA_H-elongata_contig53426.12683.1 vs. uniprot
Match: E2BS40_HARSA (Zinc finger BED domain-containing protein 1 (Fragment) n=2 Tax=Harpegnathos saltator TaxID=610380 RepID=E2BS40_HARSA) HSP 1 Score: 72.0 bits (175), Expect = 2.310e-14 Identity = 36/61 (59.02%), Postives = 45/61 (73.77%), Query Frame = 1
Query: 181 LKWWLARRDEHPTLYSVACVYLAVPTTSGSSERVFSAAGNIVTKKRNMLSPENVNNLVFLH 363
LKWW A + +P + ++ VYLA+ +S SSERVFS AGNIVT KRN LS ENVN L+FL+
Sbjct: 3 LKWWKAHENLYPMIAALTKVYLAILASSASSERVFSTAGNIVTAKRNCLSTENVNLLIFLN 63
BLAST of mRNA_H-elongata_contig53426.12683.1 vs. uniprot
Match: A0A1A7XRV2_9TELE (Dimer_Tnp_hAT domain-containing protein (Fragment) n=1 Tax=Iconisemion striatum TaxID=60296 RepID=A0A1A7XRV2_9TELE) HSP 1 Score: 74.7 bits (182), Expect = 3.110e-14 Identity = 43/96 (44.79%), Postives = 57/96 (59.38%), Query Frame = 1
Query: 76 LKRQNILWGASMAEFELSRFDAEQSIKHTRSSTNALKWWLARRDEHPTLYSVACVYLAVPTTSGSSERVFSAAGNIVTKKRNMLSPENVNNLVFLH 363
+K+ A AE E+ R+ E + N L WW + E+P L +A YL VP TS +SERVFS AG+IVT KR+ LSP++VN L+FLH
Sbjct: 85 IKKHGQKTPAMRAEDEIQRYRVENPAG---LNENPLTWWRSNEREYPLLARLAKQYLCVPGTSIASERVFSTAGDIVTAKRSCLSPDHVNELLFLH 177
BLAST of mRNA_H-elongata_contig53426.12683.1 vs. uniprot
Match: A0A0F8B6K5_LARCR (Zinc finger BED domain-containing protein 1 n=1 Tax=Larimichthys crocea TaxID=215358 RepID=A0A0F8B6K5_LARCR) HSP 1 Score: 72.4 bits (176), Expect = 6.630e-14 Identity = 43/88 (48.86%), Postives = 52/88 (59.09%), Query Frame = 1
Query: 100 GASMAEFELSRFDAEQSIKHTRSSTNALKWWLARRDEHPTLYSVACVYLAVPTTSGSSERVFSAAGNIVTKKRNMLSPENVNNLVFLH 363
G+ M E+ + EQ I +S L+WW PTL +A YL+VP TS SE VFSAAGNIVTKKR LS E+V+ L FLH
Sbjct: 39 GSEMVRNEVLMYFGEQCIARDKSP---LQWWKENAARFPTLAILAKSYLSVPATSTPSEHVFSAAGNIVTKKRASLSREHVDMLTFLH 123 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig53426.12683.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig53426.12683.1 >prot_H-elongata_contig53426.12683.1 ID=prot_H-elongata_contig53426.12683.1|Name=mRNA_H-elongata_contig53426.12683.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=121bp LIDILRTYVASIDPRPSPVIISADELKRQNILWGASMAEFELSRFDAEQSback to top mRNA from alignment at H-elongata_contig53426:1567..1929+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig53426.12683.1 ID=mRNA_H-elongata_contig53426.12683.1|Name=mRNA_H-elongata_contig53426.12683.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=363bp|location=Sequence derived from alignment at H-elongata_contig53426:1567..1929+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig53426:1567..1929+ >mRNA_H-elongata_contig53426.12683.1 ID=mRNA_H-elongata_contig53426.12683.1|Name=mRNA_H-elongata_contig53426.12683.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=726bp|location=Sequence derived from alignment at H-elongata_contig53426:1567..1929+ (Himanthalia elongata Himel1 dioecious)back to top |