mRNA_H-elongata_contig53326.12673.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig53326.12673.1 vs. uniprot
Match: A0A6H5KJQ1_9PHAE (DHQ_synthase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KJQ1_9PHAE) HSP 1 Score: 308 bits (788), Expect = 1.420e-99 Identity = 160/232 (68.97%), Postives = 174/232 (75.00%), Query Frame = 1
Query: 1 NIVNGLGEIMKLALVRSTELFHLLEQHGPRLVQERFQVRERSPQFATPHLAASLDVKFDSIYLACRFVHGYFCAGSQCPDGVADRVIELSVQIMLEELGPNLWEHKLERCVDYGHTFSKIIEMVPGADIMHGEAVNVDGFFCLVLAKRRGMISQAVLDRVFAVMKNIGLPTIHESVELKSMVKALADAVEHRHGKQRVPLISGGIGSSACVNDLDAKELEGAIEELWAMHGD 696
NI+NGLGEIMKLALVRSTELF LLE HG RLV++RF Q DGV+DRVIELSVQIMLEELGPNLWEHKLERCVDYGHTFSKIIEM P ADIMHGEAVNVDGF CLV+AKRRGMI++AVLDRVF VMK+IGLPTIHESV+L MVK LADAVEHRHGKQRVPL+ GGIGSS CVND++ EL+GAI E WA+HGD
Sbjct: 319 NIINGLGEIMKLALVRSTELFSLLELHGARLVRDRF----------------------------------------QGADGVSDRVIELSVQIMLEELGPNLWEHKLERCVDYGHTFSKIIEMEPAADIMHGEAVNVDGFLCLVIAKRRGMITEAVLDRVFRVMKSIGLPTIHESVQLAPMVKGLADAVEHRHGKQRVPLLKGGIGSSVCVNDINPDELKGAIAEAWALHGD 510
BLAST of mRNA_H-elongata_contig53326.12673.1 vs. uniprot
Match: A0A835YRH6_9STRA (DHQ_synthase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRH6_9STRA) HSP 1 Score: 255 bits (651), Expect = 8.060e-79 Identity = 134/230 (58.26%), Postives = 158/230 (68.70%), Query Frame = 1
Query: 1 NIVNGLGEIMKLALVRSTELFHLLEQHGPRLVQERFQVRERSPQFATPHLAASLDVKFDSIYLACRFVHGYFCAGSQCPDGVADRVIELSVQIMLEELGPNLWEHKLERCVDYGHTFSKIIEMVPGADIMHGEAVNVDGFFCLVLAKRRGMISQAVLDRVFAVMKNIGLPTIHESVELKSMVKALADAVEHRHGKQRVPLISGGIGSSACVNDLDAKELEGAIEELWAMH 690
N+VNGLGE+MKLALVRS ELF LLE HG RLV+ERF Q D VADRVIELS+QIMLEELGPNLWE KLERCVDYGHTFSKI+EM PGAD+MHGEAVNVDG C+VLA RG+IS AV DRVFA M+ +GLPT+H +V ++ + LADAV+HR+G QR+PL++G IG++ CVND+ ELE A +LWAMH
Sbjct: 345 NVVNGLGEVMKLALVRSAELFCLLEAHGARLVRERF----------------------------------------QGADPVADRVIELSIQIMLEELGPNLWEEKLERCVDYGHTFSKILEMEPGADLMHGEAVNVDGALCVVLAANRGLISAAVRDRVFAAMRGVGLPTLHPAVTPAALAQGLADAVQHRNGAQRIPLLTG-IGAAVCVNDITPAELEVACAQLWAMH 533
BLAST of mRNA_H-elongata_contig53326.12673.1 vs. uniprot
Match: A0A7S3YJ31_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YJ31_HETAK) HSP 1 Score: 252 bits (644), Expect = 3.020e-78 Identity = 135/230 (58.70%), Postives = 156/230 (67.83%), Query Frame = 1
Query: 1 NIVNGLGEIMKLALVRSTELFHLLEQHGPRLVQERFQVRERSPQFATPHLAASLDVKFDSIYLACRFVHGYFCAGSQCPDGVADRVIELSVQIMLEELGPNLWEHKLERCVDYGHTFSKIIEMVPGADIMHGEAVNVDGFFCLVLAKRRGMISQAVLDRVFAVMKNIGLPTIHESVELKSMVKALADAVEHRHGKQRVPLISGGIGSSACVNDLDAKELEGAIEELWAMH 690
NIVNGLGE+MKLALVRS ELF LLE HGPRLV+ERF Q DG ADRVIE+S +IMLEELGPNLWE +LERCVDYGHTFSKIIEM PGADIMHGEAVN+DGF C+VL+ RRGMI+ A DR+FA M+ + LPT + + + M+K LADAVEHRHG QR+PLI IG S CVNDL +ELEGA+ +L A+H
Sbjct: 284 NIVNGLGEVMKLALVRSPELFGLLEAHGPRLVRERF----------------------------------------QGADGAADRVIEMSTEIMLEELGPNLWEDQLERCVDYGHTFSKIIEMQPGADIMHGEAVNLDGFLCVVLSHRRGMITAAQRDRIFAAMRALNLPTTCDFMTIDVMMKGLADAVEHRHGAQRIPLIDD-IGHSVCVNDLSREELEGALADLAALH 472
BLAST of mRNA_H-elongata_contig53326.12673.1 vs. uniprot
Match: A0A2V3J638_9FLOR (2-epi-5-epi-valiolone synthase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J638_9FLOR) HSP 1 Score: 237 bits (604), Expect = 5.350e-73 Identity = 123/230 (53.48%), Postives = 150/230 (65.22%), Query Frame = 1
Query: 1 NIVNGLGEIMKLALVRSTELFHLLEQHGPRLVQERFQVRERSPQFATPHLAASLDVKFDSIYLACRFVHGYFCAGSQCPDGVADRVIELSVQIMLEELGPNLWEHKLERCVDYGHTFSKIIEMVPGADIMHGEAVNVDGFFCLVLAKRRGMISQAVLDRVFAVMKNIGLPTIHESVELKSMVKALADAVEHRHGKQRVPLISGGIGSSACVNDLDAKELEGAIEELWAMH 690
N+VNG+GEIMKLALVRS ELF LLEQHGP+L+ RFQ + A PH RVIELS+QIMLEELGPNLWE++LERCVDYGHTFSKI+EMV +MHGEAVN+DGF C++LA R+G IS + DRVF+ MKNIGLPT H + +LK + KA+AD VEHRHGK R+PL+ G IGS VN+ +L+ I + +H
Sbjct: 227 NLVNGMGEIMKLALVRSPELFRLLEQHGPQLIATRFQSND-----AVPH-----------------------------------RVIELSIQIMLEELGPNLWEYRLERCVDYGHTFSKILEMVANPPVMHGEAVNIDGFLCILLAHRKGWISTQLRDRVFSAMKNIGLPTWHPACDLKVLTKAIADGVEHRHGKLRMPLVKGNIGSYGFVNECSEDDLKHVIAQAHQLH 416
BLAST of mRNA_H-elongata_contig53326.12673.1 vs. uniprot
Match: R7Q8J2_CHOCR (Probable 2-epi-valiolone synthase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q8J2_CHOCR) HSP 1 Score: 231 bits (588), Expect = 1.310e-70 Identity = 117/230 (50.87%), Postives = 147/230 (63.91%), Query Frame = 1
Query: 1 NIVNGLGEIMKLALVRSTELFHLLEQHGPRLVQERFQVRERSPQFATPHLAASLDVKFDSIYLACRFVHGYFCAGSQCPDGVADRVIELSVQIMLEELGPNLWEHKLERCVDYGHTFSKIIEMVPGADIMHGEAVNVDGFFCLVLAKRRGMISQAVLDRVFAVMKNIGLPTIHESVELKSMVKALADAVEHRHGKQRVPLISGGIGSSACVNDLDAKELEGAIEELWAMH 690
N++NG+GEIMKLALVRS ELF LLE HG RLVQ+RFQ D V DRVIELS+QIMLEELGPNLWEH+LERCVDYGHTFSKI+EM +MHGEAVN+DGF C++L+ R+G IS +RVFA M+NIGLPT + + +K + +A+ D +EHRHGK R+PL+ G IG S +N+ +L+ AI ++ MH
Sbjct: 226 NLINGMGEIMKLALVRSKELFSLLEVHGKRLVQQRFQT----------------------------------------DDFVPDRVIELSIQIMLEELGPNLWEHRLERCVDYGHTFSKILEMTASPPVMHGEAVNIDGFICIILSHRKGWISTETRNRVFAAMRNIGLPTWNSACTIKLLSQAVTDGIEHRHGKLRMPLVRGNIGQSGFINECTEDQLQDAISQILEMH 415
BLAST of mRNA_H-elongata_contig53326.12673.1 vs. uniprot
Match: A0A7S2Y0A6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0A6_9STRA) HSP 1 Score: 231 bits (589), Expect = 9.510e-70 Identity = 123/230 (53.48%), Postives = 154/230 (66.96%), Query Frame = 1
Query: 1 NIVNGLGEIMKLALVRSTELFHLLEQHGPRLVQERFQVRERSPQFATPHLAASLDVKFDSIYLACRFVHGYFCAGSQCPDGVADRVIELSVQIMLEELGPNLWEHKLERCVDYGHTFSKIIEMVPGADIMHGEAVNVDGFFCLVLAKRRGMISQAVLDRVFAVMKNIGLPTIHESVELKSMVKALADAVEHRHGKQRVPLISGGIGSSACVNDLDAKELEGAIEELWAMH 690
NIVNGLGEIMKLALVRSTELF+LLE+HG RLV E+FQ +++ VADRVIELS++IMLEELGPNLWE+KLERCVD+GHTFSKIIEM P ADIMHGEAVN+DGF C++++ RRG+I+ +R+FA M +GLPT + ++ + + L DAVEHRHG QR+PL+ G IG S VND+ ELE A+ +L +H
Sbjct: 296 NIVNGLGEIMKLALVRSTELFNLLEEHGERLVLEKFQGQDK----------------------------------------VADRVIELSIEIMLEELGPNLWEYKLERCVDFGHTFSKIIEMQPNADIMHGEAVNIDGFLCVLISHRRGLITLEERNRIFACMTAMGLPTTCDFCTMEVLKQGLIDAVEHRHGAQRIPLVKG-IGGSVVVNDITPAELEVALRDLVEVH 484
BLAST of mRNA_H-elongata_contig53326.12673.1 vs. uniprot
Match: A0A4D9D105_9STRA (DHQ_synthase domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D105_9STRA) HSP 1 Score: 231 bits (589), Expect = 6.920e-69 Identity = 129/257 (50.19%), Postives = 160/257 (62.26%), Query Frame = 1
Query: 1 NIVNGLGEIMKLALVRSTELFHLLEQHGPRLVQERFQVRERSPQFATPHLAASLDVKFDSIYLACRFVHGYFCAGSQCPDGVADRVIELSVQIMLEELGPNLWEHKLERCVDYGHTFSKIIEMVPGADIMHGEAVNVDGFFCLVLAKRRGMISQAVLDRVFAVMKNIGLPTI--------------------------HESVELKSMVKALADAVEHRHGKQRVPLISGGIGSSACVNDLDAKELEGAIEELWAMHG 693
N+VNGLGEIMKLALVRS ELF LLE HG RLV+ERFQ + DGVADRV+ELS+QIMLEELGPNLWE +LERCVD+GHTFSKI+EM+P D+MHGEAVN+DGFF ++LA+RRG+ S + DR+F VM+ IGLPT+ +K + K L DAVEHRHG+QR+PLI G +G S CV+D+ +ELEGA++EL+ +HG
Sbjct: 393 NVVNGLGEIMKLALVRSQELFLLLEAHGARLVRERFQGQ----------------------------------------DGVADRVMELSIQIMLEELGPNLWEERLERCVDFGHTFSKIMEMLPDVDLMHGEAVNIDGFFSVLLARRRGLCSLSERDRIFKVMRAIGLPTMVPRGPSSLPXXXXXXXXXXXXXXXXXXXXEMVKMLWKGLEDAVEHRHGQQRLPLIVG-LGHSVCVSDVTREELEGAVDELYDVHG 608
BLAST of mRNA_H-elongata_contig53326.12673.1 vs. uniprot
Match: A0A1Z5J835_FISSO (3-dehydroquinate synthase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J835_FISSO) HSP 1 Score: 224 bits (570), Expect = 8.310e-67 Identity = 119/226 (52.65%), Postives = 146/226 (64.60%), Query Frame = 1
Query: 1 NIVNGLGEIMKLALVRSTELFHLLEQHGPRLVQERFQVRERSPQFATPHLAASLDVKFDSIYLACRFVHGYFCAGSQCPDGVADRVIELSVQIMLEELGPNLWEHKLERCVDYGHTFSKIIEMVPGADIMHGEAVNVDGFFCLVLAKRRGMISQAVLDRVFAVMKNIGLPTIHESVELKSMVKALADAVEHRHGKQRVPLISGGIGSSACVNDLDAKELEGAIEEL 678
NI NG GEI+KLALVRS +LF LLE HG LV RF S P+ VA R+I+LS+QIMLEELGPNLWEH LERCVDYGHTFSK++EMVPGADIMHGEAVNVDGFFC V++ RG I + +DRVF MK+IGLPT ++ + ++ DAVEHRHG+QR+PLI+ IG S CV+D+ +EL+ A+E +
Sbjct: 337 NICNGFGEILKLALVRSVDLFELLETHGKALVDTRF------------------------------------APNSSVPEEVATRIIDLSIQIMLEELGPNLWEHNLERCVDYGHTFSKLLEMVPGADIMHGEAVNVDGFFCCVISFLRGYIPRETVDRVFKCMKSIGLPTNSADLDSELAWQSCKDAVEHRHGEQRIPLITD-IGESICVSDITPEELDRALEVM 525
BLAST of mRNA_H-elongata_contig53326.12673.1 vs. uniprot
Match: A0A7S4NEJ8_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NEJ8_9STRA) HSP 1 Score: 223 bits (568), Expect = 3.580e-66 Identity = 125/228 (54.82%), Postives = 156/228 (68.42%), Query Frame = 1
Query: 1 NIVNGLGEIMKLALVRSTELFHLLEQHGPRLVQERFQVRERSPQFATPHLAASLDVKFDSIYLACRFVHGYFCAGSQCPDGVADRVIELSVQIMLEELGPNLWEHKLERCVDYGHTFSKIIEMVPGADIMHGEAVNVDGFFCLVLAKRRGMISQAVLDRVFAVMKNIGLPTIHESVELKSMV--KALADAVEHRHGKQRVPLISGGIGSSACVNDLDAKELEGAIEEL 678
NI NG GEIMKLALVRST+LF LLE HG LV+ RF P +TP +GV+DR+I+LS+QIMLEELGPNLWE KL+RCVDYGHTFSK++EMVPGADIMHGEAVNVDGFFC+VL+ RG I+ ++RVFA MK++ L T +S +LKS + ++ DAVEHRHG+QR+PLI+ IG S CV+D+ +EL+ AIE +
Sbjct: 373 NISNGFGEIMKLALVRSTDLFELLECHGAALVESRF-----GPNPSTP-------------------------------EGVSDRIIDLSIQIMLEELGPNLWETKLDRCVDYGHTFSKLLEMVPGADIMHGEAVNVDGFFCVVLSHLRGYIAMDTVNRVFAAMKSLALLT--DSSDLKSDLAWQSCKDAVEHRHGEQRIPLITE-IGESICVSDITPEELDRAIEMM 561
BLAST of mRNA_H-elongata_contig53326.12673.1 vs. uniprot
Match: A0A5J4YMH0_PORPP (2-epi-5-epi-valiolone synthase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YMH0_PORPP) HSP 1 Score: 218 bits (555), Expect = 1.060e-65 Identity = 116/223 (52.02%), Postives = 142/223 (63.68%), Query Frame = 1
Query: 1 NIVNGLGEIMKLALVRSTELFHLLEQHGPRLVQERFQVRERSPQFATPHLAASLDVKFDSIYLACRFVHGYFCAGSQCPDGVADRVIELSVQIMLEELGPNLWEHKLERCVDYGHTFSKIIEMVPGADIMHGEAVNVDGFFCLVLAKRRGMISQAVLDRVFAVMKNIGLPTIHESVELKSMVKALADAVEHRHGKQRVPLISGGIGSSACVNDLDAKELEGAI 669
N++NGLGEIMKLALVRS ELF L+E+HG RLV+ERF Q DGVADRVIE+S+Q MLEELGPNLWE KLERCVDYGH+FSKIIE +MHGEAVNVDGFFC+VL+ RG IS+ + R+ AVM+ +GLP S+ L ++ +A +DA+EHRHG+ R+PL+ IG VN+L ELE AI
Sbjct: 233 NVINGLGEIMKLALVRSPELFGLIEKHGARLVKERF----------------------------------------QSDDGVADRVIEISIQTMLEELGPNLWEFKLERCVDYGHSFSKIIEFESAPPLMHGEAVNVDGFFCVVLSLMRGWISEPLCLRILAVMRQLGLPVFDASMTLPNLARACSDALEHRHGQLRMPLVRNAIGEYGFVNELSEDELERAI 415 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig53326.12673.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig53326.12673.1 >prot_H-elongata_contig53326.12673.1 ID=prot_H-elongata_contig53326.12673.1|Name=mRNA_H-elongata_contig53326.12673.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=224bp MKLALVRSTELFHLLEQHGPRLVQERFQVRERSPQFATPHLAASLDVKFDback to top mRNA from alignment at H-elongata_contig53326:12..1684+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig53326.12673.1 ID=mRNA_H-elongata_contig53326.12673.1|Name=mRNA_H-elongata_contig53326.12673.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1673bp|location=Sequence derived from alignment at H-elongata_contig53326:12..1684+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig53326:12..1684+ >mRNA_H-elongata_contig53326.12673.1 ID=mRNA_H-elongata_contig53326.12673.1|Name=mRNA_H-elongata_contig53326.12673.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1344bp|location=Sequence derived from alignment at H-elongata_contig53326:12..1684+ (Himanthalia elongata Himel1 dioecious)back to top |